>gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complete sequence
          Length = 228489

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 94     tgcagcagcctgcacactgctcagc 118
              |||| ||||||||||||||||||||
Sbjct: 121379 tgcaacagcctgcacactgctcagc 121403

>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 149   agtgatgatgatggttttaccaaca 173
             |||||||||| ||||||||||||||
Sbjct: 99130 agtgatgatgctggttttaccaaca 99106

>gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, complete sequence
          Length = 191786

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    cagcagcctgcacactgctcagcac 120
             |||||||| ||||||||||||||||
Sbjct: 14655 cagcagccagcacactgctcagcac 14631

>gb|AC021694.8| Homo sapiens, clone RP11-24F3, complete sequence
          Length = 149179

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  aatggaatttgctatttgcta 222
            |||||||||||||||||||||
Sbjct: 8999 aatggaatttgctatttgcta 9019

>ref|NM_130057.2| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.1 mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 caactttgcacccttgaagt 281
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379

>ref|NM_130056.4| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.2 mRNA, complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 caactttgcacccttgaagt 281
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379

>ref|XM_642128.1| Dictyostelium discoideum RGS domain-containing protein (DDB0229847),
            partial mRNA
          Length = 6693

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  tattaagtgatgatgatggt 163
            ||||||||||||||||||||
Sbjct: 1735 tattaagtgatgatgatggt 1716

>ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_11437), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 atatatttttgaaattgcac 247
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891

>ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_3955), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 atatatttttgaaattgcac 247
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891

>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence
          Length = 197574

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 104   tgcacactgctcagcactgtctgc 127
             ||||||| ||||||||||||||||
Sbjct: 91038 tgcacaccgctcagcactgtctgc 91015

>gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complete sequence
          Length = 186465

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    tgcccaactttgcacccttg 277
              ||||||||||||||||||||
Sbjct: 177621 tgcccaactttgcacccttg 177602

>gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complete sequence
          Length = 121520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   tgcccaactttgcacccttg 277
             ||||||||||||||||||||
Sbjct: 53535 tgcccaactttgcacccttg 53516

>gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome 5, complete sequence
          Length = 152463

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    tgcagcagcctgcacactgc 113
             ||||||||||||||||||||
Sbjct: 45063 tgcagcagcctgcacactgc 45082

>gb|BT000902.1| Arabidopsis thaliana clone C105048 unknown protein (At2g44920)
           mRNA, complete cds
          Length = 664

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 caactttgcacccttgaagt 281
           ||||||||||||||||||||
Sbjct: 384 caactttgcacccttgaagt 365

>gb|AY050941.2| Arabidopsis thaliana At2g44920 mRNA sequence
          Length = 612

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 caactttgcacccttgaagt 281
           ||||||||||||||||||||
Sbjct: 415 caactttgcacccttgaagt 396

>gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromosome 7, complete sequence
          Length = 154622

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    tgcccaactttgcacccttg 277
              ||||||||||||||||||||
Sbjct: 139671 tgcccaactttgcacccttg 139652

>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12
          Length = 253050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    ggttttaccaacaaagaaattagt 184
              |||||||| |||||||||||||||
Sbjct: 209287 ggttttacaaacaaagaaattagt 209310

>emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in linkage group 5,
              complete sequence
          Length = 197499

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    atttgctactcctatatatt 234
              ||||||||||||||||||||
Sbjct: 131378 atttgctactcctatatatt 131397

>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
             sequence
          Length = 85534

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   caactttgcacccttgaagt 281
             ||||||||||||||||||||
Sbjct: 27691 caactttgcacccttgaagt 27710

>gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park Cancer Institute
            Human PAC Library) complete sequence
          Length = 40446

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   ttgcagcagcctgcacactg 112
            ||||||||||||||||||||
Sbjct: 6548 ttgcagcagcctgcacactg 6529

>ref|XM_628231.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_420),
            partial mRNA
          Length = 6129

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 128  aatttccaagtatttctatt 147
            ||||||||||||||||||||
Sbjct: 5554 aatttccaagtatttctatt 5535

>gb|AY033393.1| Ovis aries estrogen receptor alpha mRNA, partial cds
          Length = 5653

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  tatatatttttgaaattgca 246
            ||||||||||||||||||||
Sbjct: 3341 tatatatttttgaaattgca 3360

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 210      ttgctatttgctactcctatatat 233
                |||||| |||||||||||||||||
Sbjct: 19842952 ttgctaattgctactcctatatat 19842975

>emb|BX822009.1|CNS0AA4Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 971

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 caactttgcacccttgaagt 281
           ||||||||||||||||||||
Sbjct: 357 caactttgcacccttgaagt 338

>gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, complete sequence
          Length = 208024

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 220    ctactcctatatatttttgaaatt 243
              |||||||| |||||||||||||||
Sbjct: 127411 ctactcctgtatatttttgaaatt 127388

>ref|NM_205829.1| Xenopus tropicalis hypothetical protein MGC75848 (MGC75848), mRNA
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 569 atggatcaacttgatgatga 588
           ||||||||||||||||||||
Sbjct: 727 atggatcaacttgatgatga 746

>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ttgctatttgctactcctatatat 233
             |||||| |||||||||||||||||
Sbjct: 67392 ttgctaattgctactcctatatat 67415

>gb|BC066129.1| Xenopus tropicalis hypothetical protein MGC75848, mRNA (cDNA clone
           MGC:75848 IMAGE:5382660), complete cds
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 569 atggatcaacttgatgatga 588
           ||||||||||||||||||||
Sbjct: 727 atggatcaacttgatgatga 746

>emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in linkage group 9,
             complete sequence
          Length = 61817

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   cttccggattttcagagaca 323
             ||||||||||||||||||||
Sbjct: 18241 cttccggattttcagagaca 18222

>emb|CR761091.2| Xenopus tropicalis finished cDNA, clone TEgg073i18
          Length = 2003

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 569 atggatcaacttgatgatga 588
           ||||||||||||||||||||
Sbjct: 679 atggatcaacttgatgatga 698

>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence
          Length = 235239

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ttttaccaacaaagaaatta 182
              ||||||||||||||||||||
Sbjct: 138947 ttttaccaacaaagaaatta 138928

>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 219949

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    aatttccaagtatttctatt 147
              ||||||||||||||||||||
Sbjct: 219130 aatttccaagtatttctatt 219111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,566,263
Number of Sequences: 3902068
Number of extensions: 5566263
Number of successful extensions: 99522
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99454
Number of HSP's gapped (non-prelim): 68
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)