ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14e07 |
|---|---|
| Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 65.1 bits (157), Expect = 6e-11 Identities = 29/57 (50%), Positives = 41/57 (71%) Frame = +2 Query: 110 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 280 A EH+ C++ EG LCVNNCGFFGS+ATMN+CS C+ ++ +KQ+Q S+ +S Sbjct: 2 AEEHR---CETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVES 55
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 52.4 bits (124), Expect = 4e-07 Identities = 22/58 (37%), Positives = 35/58 (60%) Frame = +2 Query: 116 EHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVN 289 E ++ S P LCV CGFFGS + MN+CSKC++++ +EQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN 61
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 50.8 bits (120), Expect = 1e-06 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 11/96 (11%) Frame = +2 Query: 152 PILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGST 331 P LC N CGFFGS + MN+CSKC++ + +++Q +A + AVK L S Sbjct: 16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKA----------AVKNSLKLPSC 65 Query: 332 AVAV-----------AHVQAKALITAQPADIAGPSE 406 ++ AH++ ++TA+P+ + +E Sbjct: 66 SIIAPGQKHPLEIKPAHLET-VVVTAEPSSVPVAAE 100
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 43.9 bits (102), Expect = 2e-04 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Frame = +2 Query: 149 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA-----------KLAASSFDSIVNGG 295 GP+LC CGF+G+ T MCS C+KE +Q+ + + +S + V Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA 69 Query: 296 DAVKEHL--AAGSTAVAVAHVQAKALITAQ 379 DA + AAGST+ +V AL Q Sbjct: 70 DAGLNNCEGAAGSTSEKSRNVPVAALPVTQ 99
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 43.5 bits (101), Expect = 2e-04 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +2 Query: 149 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA 253 GP+LC CGF+G+ T MCS C+KE +Q+ + Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +2 Query: 125 ETGCQSREGPILCVN-NCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 280 +TG + P L CGF+GS+ TMN+CSKC + KQ A S+ S Sbjct: 3 DTGSERSNAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +2 Query: 173 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 280 CGF+GS+ TMN+CSKC + KQ A S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS 55
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.011 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 173 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 280 CGF+GS+ TMN+CSKC + KQ S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.011 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 173 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 280 CGF+GS+ TMN+CSKC + KQ S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 37.0 bits (84), Expect = 0.019 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +2 Query: 110 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 259 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 140 SLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 189
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.0 bits (84), Expect = 0.019 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +2 Query: 110 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 259 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.0 bits (84), Expect = 0.019 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +2 Query: 110 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 259 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 34.7 bits (78), Expect = 0.094 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 158 LCVNNCGFFGSAATMNMCSKC 220 LC N+CGF G+ AT N+C C Sbjct: 21 LCANSCGFPGNPATQNLCQNC 41
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.5 bits (75), Expect = 0.21 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +2 Query: 170 NCGFFGSAATMNMCSKCHKEMAMKQEQAKLA 262 NC F+G A T + CS C++E ++ +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.0 bits (71), Expect = 0.61 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 170 NCGFFGSAATMNMCSKCHKEMAMKQEQAK 256 NC F+G A T + CS C++E ++ +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 31.2 bits (69), Expect = 1.0 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 170 NCGFFGSAATMNMCSKCHKEMAMKQEQ 250 NC F+G T N CS C++E ++E+ Sbjct: 806 NCSFYGHPETNNFCSCCYREELRRRER 832
>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3| Length = 228 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = +2 Query: 236 MKQEQAKLAASSFDSIVNGGDAVKEHLAAG----STAVAVAHVQAKALITAQPADIAGPS 403 +K ++AK +++ GDAVK+++ G T V +Q + ++ P + GP+ Sbjct: 153 LKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPN 212
>DNAK_CYAME (Q85FW4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 29.6 bits (65), Expect = 3.0 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +2 Query: 197 TMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITA 376 T ++ +C K + AKL+ D +V L GST + K L+ Sbjct: 304 TSDLIERCRKPVEQALTDAKLSKQDIDEVV---------LVGGSTRIPAVQQLVKDLLGK 354 Query: 377 QPADIAGPSE 406 QP P E Sbjct: 355 QPNQSVNPDE 364
>LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late envelope protein| 4) Length = 114 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +1 Query: 277 QHRQRWRCGERAPCCWQHSGGSCSRSGEGADHRTAC 384 +HR R + + CC Q SGGS G + H C Sbjct: 78 RHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113
>IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 subunit 7| homolog (Microtubule-destabilizing protein moe1) Length = 567 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/62 (24%), Positives = 30/62 (48%) Frame = +2 Query: 236 MKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAM 415 MK KLA + ++++ G D++K + S A H ++ +PAD+A ++ Sbjct: 451 MKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVVAYKPADLASQMNLSL 510 Query: 416 ES 421 + Sbjct: 511 SN 512
>VPH_BPP2 (P26700) Probable tail fiber protein (GpH)| Length = 669 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 227 EMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIA 394 E + + A L A F + + ++ E LAA AV A+ A TAQ A A Sbjct: 161 EQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTA 216
>DNAK_PORUM (P69377) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 620 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = +2 Query: 206 MCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPA 385 + KC + + AKL ASS D +V L GST + K LI P Sbjct: 305 LIDKCSIPVNNALKDAKLEASSIDEVV---------LVGGSTRIPAIQQMVKRLIGKDPN 355 Query: 386 DIAGPSE 406 P E Sbjct: 356 QSVNPDE 362
>DNAK_PORPU (P69376) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 620 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = +2 Query: 206 MCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPA 385 + KC + + AKL ASS D +V L GST + K LI P Sbjct: 305 LIDKCSIPVNNALKDAKLEASSIDEVV---------LVGGSTRIPAIQQMVKRLIGKDPN 355 Query: 386 DIAGPSE 406 P E Sbjct: 356 QSVNPDE 362
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +2 Query: 86 PLIS*LTKAME-HKETGCQSREGPILCVNNCG 178 P I+ KA+ H TGCQ R P+LC CG Sbjct: 842 PFITRREKALNLHSRTGCQGRREPLLC-PECG 872
>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (XOct1) Length = 760 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +2 Query: 224 KEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIA 394 ++M ++Q QA+L A++ N ++H AAG+T A A + +QP IA Sbjct: 136 QQMLLQQAQAQLLAAAVQHSAN-----QQHNAAGATISASAATPMTQIPLSQPIQIA 187
>FA43B_HUMAN (Q6ZT52) Protein FAM43B| Length = 329 Score = 28.1 bits (61), Expect = 8.8 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = +2 Query: 206 MCSKCHKEMAMKQ--EQAKLAA-SSFDSIVNGGDAV---KEHLAAGSTAVAVAHVQAKAL 367 + ++ HK A+ + Q LAA S F + DA ++HL AG A +V + L Sbjct: 180 LLARAHKARALARLLRQTALAAFSDFKRLQRQSDARHVRQQHLRAGGAAASVPRAPLRRL 239 Query: 368 ITAQPADIAGPSE 406 + A+ A PSE Sbjct: 240 LNAKCAYRPPPSE 252
>APTE_DROME (P29673) Protein apterous| Length = 469 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +2 Query: 122 KETGCQSREGPILCVNN-CGFFGSAATMNMCSKC 220 +E+ C SR+G I C N+ FFG+ CS+C Sbjct: 184 RESSCYSRDGNIYCKNDYYSFFGT----RRCSRC 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,492,454 Number of Sequences: 219361 Number of extensions: 850406 Number of successful extensions: 2793 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2786 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
