ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13o21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1)... 130 1e-34
2PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25... 110 5e-29
3PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25... 105 5e-28
4PSB2_SCHPO (Q09720) Probable proteasome subunit beta type 2 (EC ... 64 2e-10
5PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1)... 57 8e-10
6PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1)... 59 8e-10
7PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (... 58 1e-09
8PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1)... 58 1e-09
9PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macr... 62 1e-09
10PSB2_NEUCR (Q9P6U7) Probable proteasome subunit beta type 2 (EC ... 59 2e-09
11PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC ... 53 4e-07
12PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1)... 47 2e-05
13PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC ... 46 6e-05
14PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 39 0.006
15PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25... 34 0.19
16PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 prec... 34 0.24
17PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC... 32 0.71
18PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3... 31 1.6
19PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC... 31 2.1
20PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25... 30 2.7
21PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC... 30 2.7
22PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1... 30 3.5
23PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC... 30 3.5
24PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor ... 29 6.0
25PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1) 29 6.0
26PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC... 29 6.0
27Y244_BUCAP (Q8K9R6) UPF0125 protein BUsg244 29 6.0
28PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor ... 29 7.8
29PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC... 29 7.8

>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S|
           proteasome alpha subunit D) (20S proteasome subunit
           beta-4)
          Length = 212

 Score =  130 bits (326), Expect(2) = 1e-34
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = +2

Query: 50  IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKD 229
           I+KGAFGYGSYFCLSLMDKLY PDM+VEEAVDLVDKCIKEIRLRLVVAPQNF IKIVDK+
Sbjct: 126 IEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVDKE 185

Query: 230 GARDYARREIGGDSP 274
           GAR+YARR    DSP
Sbjct: 186 GAREYARRAY-TDSP 199



 Score = 35.4 bits (80), Expect(2) = 1e-34
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +1

Query: 4   GASMYYIDYIATLHKXRQGS 63
           GAS+YYIDYIAT HK  +G+
Sbjct: 111 GASLYYIDYIATFHKIEKGA 130



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>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome|
           subunit beta type 4) (20S proteasome beta subunit D-1)
           (Proteasome component GB)
          Length = 204

 Score =  110 bits (274), Expect(2) = 5e-29
 Identities = 53/69 (76%), Positives = 59/69 (85%)
 Frame = +2

Query: 50  IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKD 229
           +DKGAFGYGSYF LS MD+ Y  DM+VEEA++LVDKCI EIR RLVVAP NF IKIVDKD
Sbjct: 126 VDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKD 185

Query: 230 GARDYARRE 256
           GARDYA R+
Sbjct: 186 GARDYAWRQ 194



 Score = 36.6 bits (83), Expect(2) = 5e-29
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 1   AGASMYYIDYIATLHKXRQGS 63
           +GAS+YYIDYIATLHK  +G+
Sbjct: 110 SGASLYYIDYIATLHKVDKGA 130



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>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome|
           subunit beta type 4) (20S proteasome beta subunit D-2)
           (Proteasome component GA)
          Length = 199

 Score =  105 bits (263), Expect(2) = 5e-28
 Identities = 50/68 (73%), Positives = 57/68 (83%)
 Frame = +2

Query: 50  IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKD 229
           +DKGAFGYGSYF LS MD+ Y  DM+VEEA++LVDKCI EIR RLV+AP NF IKIVDKD
Sbjct: 126 VDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKD 185

Query: 230 GARDYARR 253
           GAR+Y  R
Sbjct: 186 GAREYGWR 193



 Score = 37.7 bits (86), Expect(2) = 5e-28
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +1

Query: 1   AGASMYYIDYIATLHKXRQGS 63
           AGAS+YYIDYIATLHK  +G+
Sbjct: 110 AGASLYYIDYIATLHKVDKGA 130



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>PSB2_SCHPO (Q09720) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 194

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 25/58 (43%), Positives = 41/58 (70%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 241
           GY S++CLS+ D+ Y PD+T++EAV ++  C  E++ R+ +  + F  K+VDKDG R+
Sbjct: 134 GYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFICKVVDKDGIRE 191



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>PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S|
           proteasome subunit beta-4)
          Length = 206

 Score = 56.6 bits (135), Expect(2) = 8e-10
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +2

Query: 59  GAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           G  GYG+ F  +++D+++ P++T +E V+L+ KC  E+  R+VV+   F  K V KDG
Sbjct: 141 GCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198



 Score = 25.4 bits (54), Expect(2) = 8e-10
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 4   GASMYYIDYIATLHKXRQG 60
           GA +YY+DY+ TL +   G
Sbjct: 123 GAHLYYLDYLGTLQEVPYG 141



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>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome|
           component C7-I) (Macropain subunit C7-I) (Multicatalytic
           endopeptidase complex subunit C7-I)
          Length = 201

 Score = 58.5 bits (140), Expect(2) = 8e-10
 Identities = 23/60 (38%), Positives = 43/60 (71%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 241
           A GYG++  LS++D+ Y P ++ E AV+L+ KC++E++ R ++    F+++I+DK+G  D
Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHD 190



 Score = 23.5 bits (49), Expect(2) = 8e-10
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   GASMYYIDYIATLHK 48
           G ++YY+DY+A L K
Sbjct: 112 GPALYYMDYLAALAK 126



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>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome|
           component C7-I) (Macropain subunit C7-I) (Multicatalytic
           endopeptidase complex subunit C7-I)
          Length = 201

 Score = 58.2 bits (139), Expect(2) = 1e-09
 Identities = 22/57 (38%), Positives = 42/57 (73%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           A GYG++  LS++D+ Y P ++ E AV+L+ KC++E++ R ++    F+++++DKDG
Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187



 Score = 23.5 bits (49), Expect(2) = 1e-09
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   GASMYYIDYIATLHK 48
           G ++YY+DY+A L K
Sbjct: 112 GPALYYMDYLAALAK 126



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>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome|
           component C7-I) (Macropain subunit C7-I) (Multicatalytic
           endopeptidase complex subunit C7-I)
          Length = 201

 Score = 58.2 bits (139), Expect(2) = 1e-09
 Identities = 22/57 (38%), Positives = 42/57 (73%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           A GYG++  LS++D+ Y P ++ E AV+L+ KC++E++ R ++    F+++++DKDG
Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187



 Score = 23.5 bits (49), Expect(2) = 1e-09
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   GASMYYIDYIATLHK 48
           G ++YY+DY+A L K
Sbjct: 112 GPALYYMDYLAALAK 126



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>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit|
           C11) (Proteinase YSCE subunit 11) (Multicatalytic
           endopeptidase complex subunit C11)
          Length = 198

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 59  GAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGAR 238
           GA GY  ++  SL+D  Y PDMT EE +DL+  C++E+  R+ +  +   +KIVDKDG R
Sbjct: 131 GAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIR 190



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>PSB2_NEUCR (Q9P6U7) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 203

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 24/60 (40%), Positives = 39/60 (65%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 241
           A GY  Y+CLS++DK +HPD+T+ + + L++ C  E++ RL +  +   +K V KDG  D
Sbjct: 132 AHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTKDGIID 191



 Score = 21.6 bits (44), Expect(2) = 2e-09
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +1

Query: 10  SMYYIDYIATLHK 48
           S+Y++DY+A+L K
Sbjct: 115 SLYWLDYLASLAK 127



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>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 210

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 40/63 (63%)
 Frame = +2

Query: 50  IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKD 229
           I+    G+GS FC S++ + ++  ++ E+A  L+ KC+ EI+ RL++  +NF + +VD  
Sbjct: 129 INHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSK 188

Query: 230 GAR 238
           G R
Sbjct: 189 GMR 191



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>PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome|
           subunit beta 4)
          Length = 199

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGAR 238
           G+   FC ++MD+ Y  DMT  E + L++KCI E + R V     + + I+DK G R
Sbjct: 136 GFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYR 192



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>PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 224

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 25/57 (43%), Positives = 34/57 (59%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           A G G Y  LS MDK ++ DM  +E VDL+ KCI E   RL +   +F   ++DK+G
Sbjct: 132 AHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFNCILIDKNG 187



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>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 241
           A G G    L + ++ Y  DMT++EA++L  + + E   R      N  I +VDK G R 
Sbjct: 166 AIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEAS-REETTADNLEIAVVDKQGFRK 224

Query: 242 YARREI 259
             R++I
Sbjct: 225 LERKKI 230



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>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 224

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 241
           A G GS     +++  Y  DM+VEE + L    +K    R   +    ++ ++ KDG + 
Sbjct: 135 ATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKI 194

Query: 242 YARREI 259
           +   EI
Sbjct: 195 FEDEEI 200



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>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC|
           3.4.25.1)
          Length = 267

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 19/75 (25%), Positives = 37/75 (49%)
 Frame = +2

Query: 20  TLTTSRHSTXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 199
           T+     S  +   A G GS   +S+++  Y PD+   EA++LV + I+      + +  
Sbjct: 147 TIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGS 206

Query: 200 NFAIKIVDKDGARDY 244
           N  + ++D++ A  Y
Sbjct: 207 NCDLVVIDEEKATPY 221



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>PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 7) (20S proteasome beta
           subunit G-1) (Proteasome component H)
          Length = 246

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +2

Query: 53  DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           D  A G+G++    ++   +H D++ E+ V L++KC++ +  R   A     I  + ++G
Sbjct: 158 DHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIAKITEEG 217



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>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome epsilon chain) (Macropain epsilon chain)
           (Multicatalytic endopeptidase complex epsilon chain)
           (Proteasome subunit X) (Proteasome chain 6)
          Length = 208

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 181
           G GS +   +MD+ Y  D+ VEEA DL  + I +   R
Sbjct: 133 GSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYR 170



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>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome epsilon chain) (Macropain epsilon chain)
           (Multicatalytic endopeptidase complex epsilon chain)
           (Proteasome subunit X) (Proteasome chain 6)
          Length = 209

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 181
           G GS +   +MD+ Y  D+ VEEA DL  + I +   R
Sbjct: 133 GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYR 170



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>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 211

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 181
           G GS F   +++  Y   MTV+E VDLV + I   + R
Sbjct: 136 GSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQR 173



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>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 242

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTV--EEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 232
           A G+G+Y    L+ ++     T+  EEA  LVD+C+K +  R   +   F I  V + G
Sbjct: 161 ATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEITTVTESG 219



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>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome subunit alpha-5)
          Length = 246

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 44  TXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 172
           T  D  A G G+    ++  + YH +MTVEEA +L  + ++++
Sbjct: 163 TRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQV 205



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>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (20S proteasome subunit E) (Proteasome epsilon chain)
          Length = 272

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +2

Query: 68  GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARDYA 247
           G GS +   ++D  Y  DMTVEEA +L  + I     R   +    ++  V  DG +   
Sbjct: 184 GSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVT 243

Query: 248 RREIG 262
             ++G
Sbjct: 244 GDDVG 248



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>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)|
           (20S proteasome beta subunit E-1) (Proteasome epsilon-1
           chain) (Proteasome component E)
          Length = 274

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 53  DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 181
           D+ + G GS +   ++D  Y  DM+VEEA +L  + I     R
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFR 223



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>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 244

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 172
           A G GS      +  L+ PD+T++EA+D+    +K++
Sbjct: 171 AIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQV 207



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>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 62  AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 172
           A G GS    S + K +H DMT+EEA  L+ K ++++
Sbjct: 170 AIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQV 206



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>Y244_BUCAP (Q8K9R6) UPF0125 protein BUsg244|
          Length = 95

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 490 FFNHEKGVINRLVHAWENLQHSSQTETYCDYIV 392
           F+ +  G+ N+LVH  EN+++  + E Y + I+
Sbjct: 47  FYKNNVGIYNKLVHLNENVKNGDRIEIYRNLII 79



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>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)|
           (20S proteasome beta subunit E-2) (Proteasome epsilon-2
           chain)
          Length = 273

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 53  DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 181
           D+ + G GS +   ++D  Y  DM+VEEA +L  + I     R
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFR 223



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>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 38  HSTXIDKGAF--GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 163
           H T +    F  G G+ +   +MD  Y P+++ EEA DL  + I
Sbjct: 189 HGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 232


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,784,199
Number of Sequences: 219361
Number of extensions: 1211702
Number of successful extensions: 3629
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3629
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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