>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  361 bits (182), Expect = 1e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2        gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 61
                |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 28834745 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 28834686

                                                                            
Query: 62       caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 121
                 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 28834685 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 28834626

                                                                            
Query: 122      cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 181
                |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 28834625 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 28834566

                                                                            
Query: 182      cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 241
                ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 28834565 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 28834506

                                                                            
Query: 242      cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 301
                ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 28834505 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 28834446

                                                                            
Query: 302      cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 361
                ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 28834445 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 28834386

                          
Query: 362      ggagacggcg 371
                 |||||||||
Sbjct: 28834385 cgagacggcg 28834376

>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score =  361 bits (182), Expect = 1e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                          
Query: 2      gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 61
              |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 142520 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 142461

                                                                          
Query: 62     caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 121
               ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 142460 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 142401

                                                                          
Query: 122    cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 181
              |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 142400 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 142341

                                                                          
Query: 182    cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 241
              ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 142340 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 142281

                                                                          
Query: 242    cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 301
              ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 142280 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 142221

                                                                          
Query: 302    cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 361
              ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 142220 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 142161

                        
Query: 362    ggagacggcg 371
               |||||||||
Sbjct: 142160 cgagacggcg 142151

>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0545E05
          Length = 163229

 Score =  361 bits (182), Expect = 1e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                        
Query: 2    gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 61
            |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 9831 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 9772

                                                                        
Query: 62   caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 121
             ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 9771 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 9712

                                                                        
Query: 122  cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 181
            |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 9711 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 9652

                                                                        
Query: 182  cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 241
            ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 9651 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 9592

                                                                        
Query: 242  cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 301
            ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 9591 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 9532

                                                                        
Query: 302  cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 361
            ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 9531 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 9472

                      
Query: 362  ggagacggcg 371
             |||||||||
Sbjct: 9471 cgagacggcg 9462

>dbj|AK062416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F07, full
           insert sequence
          Length = 568

 Score =  224 bits (113), Expect = 2e-55
 Identities = 179/201 (89%)
 Strand = Plus / Plus

                                                                       
Query: 171 ctcgagatcgacgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcg 230
           |||||||||||||| |||||||||||||| || ||||||| ||||||||| || || |||
Sbjct: 1   ctcgagatcgacgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcg 60

                                                                       
Query: 231 ctgggcgccgtcacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgag 290
           || ||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||
Sbjct: 61  ctcggcgcggtcacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgag 120

                                                                       
Query: 291 gaggagctgcccgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcg 350
           |||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||| | 
Sbjct: 121 gaggagctccccgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgcc 180

                                
Query: 351 gccaagtatgtggagacggcg 371
           ||||||||||| |||||||||
Sbjct: 181 gccaagtatgtcgagacggcg 201

>ref|NM_196369.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0050N08.10), mRNA
          Length = 447

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 94  gcgccaccgtgggcaactacggc 116
           |||||||||||||||||||||||
Sbjct: 335 gcgccaccgtgggcaactacggc 357

>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050N08, complete sequence
          Length = 144593

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 94    gcgccaccgtgggcaactacggc 116
             |||||||||||||||||||||||
Sbjct: 48158 gcgccaccgtgggcaactacggc 48180

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 94       gcgccaccgtgggcaactacggc 116
                |||||||||||||||||||||||
Sbjct: 12949242 gcgccaccgtgggcaactacggc 12949264

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 384     gagacggccggcaaggcggcgccgggg 410
               |||||||||||||||| ||||||||||
Sbjct: 3302680 gagacggccggcaaggaggcgccgggg 3302706

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 94       gcgccaccgtgggcaactacggc 116
                |||||||||||||||||||||||
Sbjct: 12956582 gcgccaccgtgggcaactacggc 12956604

>gb|AE008982.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 8 of
            256 of the complete sequence
          Length = 11330

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   ccgcaacgcccgcttcaagatc 59
            ||||||||||||||||||||||
Sbjct: 3110 ccgcaacgcccgcttcaagatc 3089

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 38    ccgcaacgcccgcttcaagatc 59
             ||||||||||||||||||||||
Sbjct: 83151 ccgcaacgcccgcttcaagatc 83130



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     gccaccgccatcctgcatct 226
               ||||||||||||||||||||
Sbjct: 2244146 gccaccgccatcctgcatct 2244165

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 201    gcgatcgccaccgccatcctgcatc 225
              |||||||||||||||||| ||||||
Sbjct: 460239 gcgatcgccaccgccatcgtgcatc 460215

>gb|AF227236.1|AF227236 Halobacterium salinarum FolC-FolP fusion protein gene, complete cds
          Length = 2614

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 235 gcgccgtcacgtcggtgaccatcga 259
           |||||||||||||||||||| ||||
Sbjct: 479 gcgccgtcacgtcggtgaccctcga 503

>gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the complete genome
          Length = 17112

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 235   gcgccgtcacgtcggtgaccatcga 259
             |||||||||||||||||||| ||||
Sbjct: 11923 gcgccgtcacgtcggtgaccctcga 11899

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 209     caccgccatcctgcatctggc 229
               |||||||||||||||||||||
Sbjct: 4211907 caccgccatcctgcatctggc 4211887

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 186     gacatcggcagctcggcgatc 206
               |||||||||||||||||||||
Sbjct: 1253616 gacatcggcagctcggcgatc 1253596



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      cggcgacgacgcgtaccgca 42
               ||||||||||||||||||||
Sbjct: 1524515 cggcgacgacgcgtaccgca 1524496

>gb|U77659.1|ASU77659 Acinetobacter lwoffii K24 cic,cis-muconate lactonizing enzyme I
            (catB), catechol 1,2-dioxygenase (catA), and
            muconolactone isomerase (catC) genes, complete cds; and
            unknown genes
          Length = 5767

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   agatcgtcaaccgcatcgtca 75
            |||||||||||||||||||||
Sbjct: 1714 agatcgtcaaccgcatcgtca 1734

>gb|AC004258.1|AC004258 Homo sapiens chromosome 19, cosmid R33114, complete sequence
          Length = 36295

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   cagatggagatgggctcggcc 353
             |||||||||||||||||||||
Sbjct: 27648 cagatggagatgggctcggcc 27628

>dbj|AB009373.1| Frateuria sp. ANA-18 ORFR2, catB2, catA2, catC2 and putative electron
            transfer protein genes, complete cds
          Length = 5449

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   agatcgtcaaccgcatcgtca 75
            |||||||||||||||||||||
Sbjct: 2521 agatcgtcaaccgcatcgtca 2541

>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
             sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   atcgccaccgccatcctgca 223
             ||||||||||||||||||||
Sbjct: 39949 atcgccaccgccatcctgca 39968

>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
           complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   ctcggccgcttcgtctacggcgac 29
           |||||||||||||||| |||||||
Sbjct: 502 ctcggccgcttcgtctccggcgac 525

>ref|XM_952943.1| Neurospora crassa OR74A hypothetical protein (NCU09450.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tccgaggaggagctgcccga 304
            ||||||||||||||||||||
Sbjct: 1156 tccgaggaggagctgcccga 1175

>ref|XM_332141.1| Neurospora crassa OR74A hypothetical protein (NCU09450.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tccgaggaggagctgcccga 304
            ||||||||||||||||||||
Sbjct: 1156 tccgaggaggagctgcccga 1175

>gb|AE009176.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 202
            of 256 of the complete sequence
          Length = 10375

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  gccaccgccatcctgcatct 226
            ||||||||||||||||||||
Sbjct: 7826 gccaccgccatcctgcatct 7845

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cctgcatctggcgctgggcg 237
               ||||||||||||||||||||
Sbjct: 1335070 cctgcatctggcgctgggcg 1335051

>gb|AF521588.2| Bradyrhizobium japonicum signal peptide protein (pslP) gene, partial
            cds; putative signal peptide protein, TauC protein, TauB
            protein (tauB), putative ATP-binding ABC transporter
            protein (opuA), putative ABC transporter (opuB),
            hypothetical protein, hypothetical protein, putative
            inner membrane protein, putative transcriptional
            regulator, inner membrane protein, oxidoreductase, and
            hypothetical protein genes, complete cds; and GGDEF
            family sensory box protein gene, partial cds
          Length = 12483

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  ctgcatctggcgctgggcgc 238
            ||||||||||||||||||||
Sbjct: 5528 ctgcatctggcgctgggcgc 5509

>ref|XM_773952.1| Giardia lamblia ATCC 50803 glucokinase (GLP_49_57702_58733) partial
           mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 254 catcgacatgggcttccttg 273
           ||||||||||||||||||||
Sbjct: 714 catcgacatgggcttccttg 733

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    agctgcccgaaaagctcttc 314
              ||||||||||||||||||||
Sbjct: 277658 agctgcccgaaaagctcttc 277677

>gb|AF150874.1|AF150874 Giardia intestinalis putative glucokinase (gk) gene, partial cds
          Length = 1029

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 254 catcgacatgggcttccttg 273
           ||||||||||||||||||||
Sbjct: 714 catcgacatgggcttccttg 733

>gb|AE004605.1| Pseudomonas aeruginosa PAO1, section 166 of 529 of the complete genome
          Length = 10949

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 94    gcgccaccgtgggcaactacggcg 117
             ||||| ||||||||||||||||||
Sbjct: 10779 gcgccgccgtgggcaactacggcg 10756

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     ctgcatctggcgctgggcgc 238
               ||||||||||||||||||||
Sbjct: 7145092 ctgcatctggcgctgggcgc 7145073

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 68      catcgtcaagggcccctggctcgt 91
               ||||||||||||| ||||||||||
Sbjct: 2078047 catcgtcaagggcgcctggctcgt 2078024


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,488,753
Number of Sequences: 3902068
Number of extensions: 2488753
Number of successful extensions: 53394
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52522
Number of HSP's gapped (non-prelim): 872
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)