>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1|
          Length = 1054

 Score = 36.2 bits (82), Expect = 0.059
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
 Frame = +3

Query: 345 PLVEGWMNQVRDMTYDLEDCIDDFV-------CSATPGNSNNIAQL 461
           P+VE W+N++RD+ Y  ED +DD           A   +SN + QL
Sbjct: 64  PVVEKWVNELRDVVYHAEDALDDIATEALRLNIGAESSSSNRLRQL 109

>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2|
          Length = 1271

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
 Frame = +3

Query: 168 QAMVSASTGAMNSVLSKLATMLEDERNPRIRNNIIALRCALTSMGSFLERRAASTEDMGP 347
           +A+VS     +  +LS+     E  R   I   +  L+  L  + S L+   A   +   
Sbjct: 3   EAVVSFGVEKLWELLSR-----ESARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNET-E 56

Query: 348 LVEGWMNQVRDMTYDLEDCIDDFVCSATPGNSNNIAQLLKMVTW----RRQYTSLLQELK 515
            V  ++  V+D+ YD +D I+ F+ +   G    I + ++ +      RR++ S ++ + 
Sbjct: 57  RVRNFLEDVKDIVYDADDIIESFLLNELRGKEKGIKKQVRTLACFLVDRRKFASDIEGIT 116

Query: 516 EQVSE 530
           +++SE
Sbjct: 117 KRISE 121

>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +3

Query: 327  STEDMGPLVEGWMNQVRDMTYDLEDCIDDFVCSATPGNSNNIAQLLKMVTWRRQYTSLLQ 506
            S+ D+ P VEG + QV +M  +     DD +    PG+  +++  L     R + T    
Sbjct: 855  SSRDIDPHVEGQIGQVAEMQKNKISKDDDIMSEDLPGHQGDLSTFLHQEGKREKITPRNG 914

Query: 507  ELKEQVSE 530
            EL   VSE
Sbjct: 915  ELFHCVSE 922

>GUN2_BACS4 (P06565) Endoglucanase B (EC 3.2.1.4) (Endo-1,4-beta-glucanase)|
           (Cellulase)
          Length = 409

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 396 PNHRSCPGPDSSTPRPMGPYPLY*PPSSQGSFPCWSVRTL 277
           P   S P P    P P  P P   PPS  G +P W   T+
Sbjct: 337 PTPPSDPDPGEPEPDPGEPDPT--PPSDPGDYPAWDPNTI 374

>DNAA2_CHLCV (Q823E6) Chromosomal replication initiator protein dnaA 2|
          Length = 460

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 363 MNQVRDMTYDLEDCIDDFVCSATPGNSNNIAQLLKMVTWRRQYTSLLQEL 512
           M+Q   ++  +ED   DF+  A   N   +   LK+++ R  Y  L Q+L
Sbjct: 281 MHQAEQLSVRIEDTALDFLIHALSSNVKTLIDALKLLSKRVAYKKLAQQL 330

>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 432  G*LSTRNRRCSLPNHRSCPGPDSSTPRPMGPYPLY*PPSSQGSFP 298
            G L ++ RR ++P   S PGP    P P G  P+     S+GS P
Sbjct: 1984 GTLPSKRRRVAMPG--SAPGPGEDRPPPRGSSPIL----SEGSLP 2022

>HOX3_BRAFL (P50901) Homeobox protein HOX3|
          Length = 411

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -2

Query: 408 RCSLPNHRSCPGPDSSTPRPMG---PYPLY*PPSSQGSFPCWSVRTLGQ 271
           +C   NH  CP   +  P PMG   P+P   PP      P   +  + Q
Sbjct: 291 QCYQSNHSPCPPSSAPHPVPMGNHVPHPRQGPPHMTNGLPASPLEVVSQ 339

>Y2924_MYCBO (P65409) Hypothetical protein Mb2924c|
          Length = 779

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = -1

Query: 250 GLRSSSSMVASFERTEFIAPVDALTIACTAMEKQIRFSEWMDTMGGL 110
           GL      V    R  FI P D  T   TA ++    SEW D  GGL
Sbjct: 677 GLDDRYRGVKGGRRVVFINPADIETFGLTAGDRVDLVSEWTDGQGGL 723

>Y2900_MYCTU (P65408) Hypothetical protein Rv2900c/MT2968|
          Length = 779

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = -1

Query: 250 GLRSSSSMVASFERTEFIAPVDALTIACTAMEKQIRFSEWMDTMGGL 110
           GL      V    R  FI P D  T   TA ++    SEW D  GGL
Sbjct: 677 GLDDRYRGVKGGRRVVFINPADIETFGLTAGDRVDLVSEWTDGQGGL 723

>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 378 PGPDSSTPRPMGPYPLY*PPSSQGSFPCW 292
           PGP      P+GP  L  PP S+G  P W
Sbjct: 652 PGPHGGPGGPVGPRLLGPPPPSRGGDPFW 680

>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 378 PGPDSSTPRPMGPYPLY*PPSSQGSFPCW 292
           PGP      P+GP  L  PP S+G  P W
Sbjct: 652 PGPHGGPGGPVGPRLLGPPPPSRGGDPFW 680

>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3|
          Length = 847

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +3

Query: 174 MVSASTGAMNSVLSKLATMLEDE--RNPRIRNNIIALRCALTSMGSFLER-RAASTEDMG 344
           MV A TG    VL+K+   L +E      +++++  L+  LT +  +L+   A   ED  
Sbjct: 1   MVDAVTGF---VLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEARERED-- 55

Query: 345 PLVEGWMNQVRDMTYDLEDCIDDF 416
            + + W   V D+ YD+ED +D +
Sbjct: 56  EVSKEWTKLVLDIAYDIEDVLDTY 79

>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2|
           (EC 2.7.11.1)
          Length = 1734

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 426 LSTRNRRCSLPNHRSCPGPDSSTPRPMGPYPLY--*PPSSQGS 304
           ++ R+R   LP+   CP   SSTPR      ++   PPS +GS
Sbjct: 865 MTVRHRCSGLPDGPHCPEETSSTPRKQQQEGIWVLIPPSGEGS 907

>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = -2

Query: 396 PNHRSCPGPDSSTPRPMGPYPLY*PPSSQGSFPCWSV--RTLGQ*CCS*CEGCVHPPAW* 223
           P+  SC    SS+P P G  PL   PS+  + P   V  R   Q CC  C     P    
Sbjct: 198 PSLSSCSFSPSSSPPPPGDLPL--SPSAFSAAPGTPVTRRDPNQACCPSCRRSTTPSTIW 255

Query: 222 RALRGQSSSP 193
             L G + SP
Sbjct: 256 GPLGGLARSP 265

>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas|
           syringae protein 3)
          Length = 926

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
 Frame = +3

Query: 171 AMVSASTGAMNSVLSKLATMLEDERNPRIRNNIIALRCALTSMGSFLERRA-----ASTE 335
           A V    G + SVL     +L       +   I  ++  L  M SFLE         ST 
Sbjct: 4   ATVDFGIGRILSVLENETLLLSG-----VHGEIDKMKKELLIMKSFLEDTHKHGGNGSTT 58

Query: 336 DMGPLVEGWMNQVRDMTYDLEDCIDDF 416
               L + ++   RD+ Y +ED +D+F
Sbjct: 59  TTTQLFQTFVANTRDLAYQIEDILDEF 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,019,298
Number of Sequences: 219361
Number of extensions: 1848602
Number of successful extensions: 4928
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4922
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)