ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187486.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 325 bits (164), Expect = 6e-86 Identities = 242/268 (90%) Strand = Plus / Plus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtg 157 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| ||||||| Sbjct: 44 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggattgggcgtg 103 Query: 158 cggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaaggagg 217 |||||||||||||||| || |||||||||||||||||||| ||||||||||| || |||| Sbjct: 104 cggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgcaatgagg 163 Query: 218 cggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccg 277 ||||||| || ||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 164 cggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcaccatctccg 223 Query: 278 tctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgct 337 ||||||||||||||| ||||| |||||||||||||| || ||||| ||||| || |||| Sbjct: 224 tctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctgaccgct 283 Query: 338 tcggaggcaagctcaacatcctcgtaaa 365 |||| ||||||||| ||||||||||||| Sbjct: 284 tcggcggcaagctcgacatcctcgtaaa 311
>dbj|AK109304.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E03, full insert sequence Length = 927 Score = 325 bits (164), Expect = 6e-86 Identities = 242/268 (90%) Strand = Plus / Plus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtg 157 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| ||||||| Sbjct: 105 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggattgggcgtg 164 Query: 158 cggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaaggagg 217 |||||||||||||||| || |||||||||||||||||||| ||||||||||| || |||| Sbjct: 165 cggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgcaatgagg 224 Query: 218 cggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccg 277 ||||||| || ||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 225 cggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcaccatctccg 284 Query: 278 tctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgct 337 ||||||||||||||| ||||| |||||||||||||| || ||||| ||||| || |||| Sbjct: 285 tctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctgaccgct 344 Query: 338 tcggaggcaagctcaacatcctcgtaaa 365 |||| ||||||||| ||||||||||||| Sbjct: 345 tcggcggcaagctcgacatcctcgtaaa 372
>dbj|AK099430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012E01, full insert sequence Length = 1051 Score = 325 bits (164), Expect = 6e-86 Identities = 242/268 (90%) Strand = Plus / Plus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtg 157 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| ||||||| Sbjct: 81 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggattgggcgtg 140 Query: 158 cggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaaggagg 217 |||||||||||||||| || |||||||||||||||||||| ||||||||||| || |||| Sbjct: 141 cggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgcaatgagg 200 Query: 218 cggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccg 277 ||||||| || ||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 201 cggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcaccatctccg 260 Query: 278 tctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgct 337 ||||||||||||||| ||||| |||||||||||||| || ||||| ||||| || |||| Sbjct: 261 tctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctgaccgct 320 Query: 338 tcggaggcaagctcaacatcctcgtaaa 365 |||| ||||||||| ||||||||||||| Sbjct: 321 tcggcggcaagctcgacatcctcgtaaa 348
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 260 bits (131), Expect = 3e-66 Identities = 191/211 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 8913314 ggcgtgcggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgca 8913255 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 8913254 atgaggcggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcacca 8913195 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 8913194 tctccgtctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctg 8913135 Query: 332 aacgcttcggaggcaagctcaacatcctcgt 362 | |||||||| ||||||||| |||||||||| Sbjct: 8913134 accgcttcggcggcaagctcgacatcctcgt 8913104 Score = 210 bits (106), Expect = 2e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 8924113 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 8924054 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 8924053 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 8923994 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||||||||||||| ||| || | |||||||||||| | Sbjct: 8923993 agtctgcgacgtctccgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcct 8923934 Query: 336 cttcggaggcaagctcaacatcctcgtaaa 365 || ||| ||||||||| ||||||||||||| Sbjct: 8923933 ctacggtggcaagctcgacatcctcgtaaa 8923904 Score = 196 bits (99), Expect = 4e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||| Sbjct: 8919888 ggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccgga 8919829 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 |||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| | Sbjct: 8919828 aggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcacca 8919769 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcct 314 ||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct: 8919768 cctccgtctgcgatctctcggttcgggaccagcgtgagcgcct 8919726 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 21290980 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 21290921 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 21290920 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 21290861 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 21290860 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 21290801 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 21290800 gcctctacggtggcaagctcgacatccttgtaaa 21290767 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggat 149 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| Sbjct: 8913480 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggat 8913429 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||| Sbjct: 8920056 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcggg 8920003 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 8924275 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 8924233
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 260 bits (131), Expect = 3e-66 Identities = 191/211 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 104202 ggcgtgcggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgca 104143 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 104142 atgaggcggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcacca 104083 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 104082 tctccgtctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctg 104023 Query: 332 aacgcttcggaggcaagctcaacatcctcgt 362 | |||||||| ||||||||| |||||||||| Sbjct: 104022 accgcttcggcggcaagctcgacatcctcgt 103992 Score = 210 bits (106), Expect = 2e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 115001 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 114942 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 114941 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 114882 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||||||||||||| ||| || | |||||||||||| | Sbjct: 114881 agtctgcgacgtctccgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcct 114822 Query: 336 cttcggaggcaagctcaacatcctcgtaaa 365 || ||| ||||||||| ||||||||||||| Sbjct: 114821 ctacggtggcaagctcgacatcctcgtaaa 114792 Score = 196 bits (99), Expect = 4e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||| Sbjct: 110776 ggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccgga 110717 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 |||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| | Sbjct: 110716 aggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcacca 110657 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcct 314 ||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct: 110656 cctccgtctgcgatctctcggttcgggaccagcgtgagcgcct 110614 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggat 149 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| Sbjct: 104368 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggat 104317 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||| Sbjct: 110944 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcggg 110891 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 115163 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 115121
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 260 bits (131), Expect = 3e-66 Identities = 191/211 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 38175 ggcgtgcggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgca 38116 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 38115 atgaggcggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcacca 38056 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 38055 tctccgtctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctg 37996 Query: 332 aacgcttcggaggcaagctcaacatcctcgt 362 | |||||||| ||||||||| |||||||||| Sbjct: 37995 accgcttcggcggcaagctcgacatcctcgt 37965 Score = 210 bits (106), Expect = 2e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 48974 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 48915 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 48914 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 48855 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||||||||||||| ||| || | |||||||||||| | Sbjct: 48854 agtctgcgacgtctccgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcct 48795 Query: 336 cttcggaggcaagctcaacatcctcgtaaa 365 || ||| ||||||||| ||||||||||||| Sbjct: 48794 ctacggtggcaagctcgacatcctcgtaaa 48765 Score = 196 bits (99), Expect = 4e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||| Sbjct: 44749 ggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccgga 44690 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 |||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| | Sbjct: 44689 aggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcacca 44630 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcct 314 ||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct: 44629 cctccgtctgcgatctctcggttcgggaccagcgtgagcgcct 44587 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggat 149 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| Sbjct: 38341 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggat 38290 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||| Sbjct: 44917 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcggg 44864 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 49136 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 49094
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 260 bits (131), Expect = 3e-66 Identities = 191/211 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 8911149 ggcgtgcggtggtggaggagctggcggcgctgggggcggccgtgcatacctgctcccgca 8911090 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 8911089 atgaggcggagctaggggagcgcctcaaggagtgggaggccagggggttccgcgtcacca 8911030 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 8911029 tctccgtctgcgacctctccgcgcgggaccagcgggagcgcctcatcggcgacgtcgctg 8910970 Query: 332 aacgcttcggaggcaagctcaacatcctcgt 362 | |||||||| ||||||||| |||||||||| Sbjct: 8910969 accgcttcggcggcaagctcgacatcctcgt 8910939 Score = 210 bits (106), Expect = 2e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 8921948 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 8921889 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 8921888 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 8921829 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||||||||||||| ||| || | |||||||||||| | Sbjct: 8921828 agtctgcgacgtctccgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcct 8921769 Query: 336 cttcggaggcaagctcaacatcctcgtaaa 365 || ||| ||||||||| ||||||||||||| Sbjct: 8921768 ctacggtggcaagctcgacatcctcgtaaa 8921739 Score = 196 bits (99), Expect = 4e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||| Sbjct: 8917723 ggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccgga 8917664 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 |||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| | Sbjct: 8917663 aggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcacca 8917604 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcct 314 ||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct: 8917603 cctccgtctgcgatctctcggttcgggaccagcgtgagcgcct 8917561 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 21284009 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 21283950 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 21283949 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 21283890 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 21283889 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 21283830 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 21283829 gcctctacggtggcaagctcgacatccttgtaaa 21283796 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 98 ggtggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggat 149 |||||||||| || ||||| | |||||| ||||||||||||||||||||||| Sbjct: 8911315 ggtggtctctccatggcaagatggctctggtcaccggaggcacccgcgggat 8911264 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||| Sbjct: 8917891 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcggg 8917838 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 8922110 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 8922068
>dbj|AK098913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I11, full insert sequence Length = 937 Score = 258 bits (130), Expect = 1e-65 Identities = 232/266 (87%) Strand = Plus / Plus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcg 159 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 63 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcgggcgtgcg 122 Query: 160 gtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaaggaggcg 219 |||||||||||||| || ||||||||||| |||||||||| |||||||||||||||| | Sbjct: 123 gtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccggaaggaggag 182 Query: 220 gagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccgtc 279 ||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 183 gagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcaccacctccgtc 242 Query: 280 tgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgcttc 339 ||||| ||||| || ||||| ||||| |||||||| | || | ||||| || | |||| Sbjct: 243 tgcgatctctcggttcgggaccagcgtgagcgcctcctccgccaagtcgctgacctcttc 302 Query: 340 ggaggcaagctcaacatcctcgtaaa 365 || ||||||||| | ||||||||||| Sbjct: 303 ggcggcaagctcgatatcctcgtaaa 328
>dbj|AK062166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B08, full insert sequence Length = 1007 Score = 258 bits (130), Expect = 1e-65 Identities = 232/266 (87%) Strand = Plus / Plus Query: 100 tggtctcttcacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcg 159 ||||||||||| || || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 130 tggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcgggcgtgcg 189 Query: 160 gtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaaggaggcg 219 |||||||||||||| || ||||||||||| |||||||||| |||||||||||||||| | Sbjct: 190 gtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccggaaggaggag 249 Query: 220 gagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccgtc 279 ||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 250 gagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcaccacctccgtc 309 Query: 280 tgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgcttc 339 ||||| ||||| || ||||| ||||| |||||||| | || | ||||| || | |||| Sbjct: 310 tgcgatctctcggttcgggaccagcgtgagcgcctcctccgccaagtcgctgacctcttc 369 Query: 340 ggaggcaagctcaacatcctcgtaaa 365 || ||||||||| | ||||||||||| Sbjct: 370 ggcggcaagctcgatatcctcgtaaa 395
>dbj|AK058655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F07, full insert sequence Length = 1166 Score = 254 bits (128), Expect = 2e-64 Identities = 221/252 (87%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcggtggtggagga 170 |||||| ||||| ||||||||||| ||||||||||| ||||||| |||||||||||| || Sbjct: 81 cggcaagacggccctcgtcaccggcggcacccgcggcatcgggcatgcggtggtggacga 140 Query: 171 gcttgccgcgctgggggcggccgtgcacacctgctcccggaaggaggcggagcttggcga 230 ||| || |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 141 gctggcggcgctgggggcggccgtgcacacctgctccaggaaggaggccgagctgggcga 200 Query: 231 gcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctccgtctgcgacctctc 290 |||||||| ||||||||||| || ||||||||||||||| ||| ||||||||| |||| Sbjct: 201 gcgcctcagggagtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctc 260 Query: 291 cgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacgcttcggaggcaagct 350 ||| |||||||||||||| ||| || | |||||||||||| | || ||| |||||||| Sbjct: 261 cgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcctctacggtggcaagct 320 Query: 351 caacatcctcgt 362 | |||||||||| Sbjct: 321 cgacatcctcgt 332
>ref|NM_187487.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 204 bits (103), Expect = 1e-49 Identities = 181/207 (87%) Strand = Plus / Plus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 210 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 269 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 270 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 329 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||||||||||||| ||| || | |||||||||||| | Sbjct: 330 agtctgcgacgtctccgtgcgggagcagcgggaacgcatgctccgcgaggtcgccggcct 389 Query: 336 cttcggaggcaagctcaacatcctcgt 362 || ||| ||||||||| |||||||||| Sbjct: 390 ctacggtggcaagctcgacatcctcgt 416 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 48 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 90
>dbj|AK069762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K22, full insert sequence Length = 1272 Score = 196 bits (99), Expect = 4e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 156 tgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccggaagga 215 |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 244 tgcggtggtggacgagctggcggcgctgggggcggccgtgcacacctgctccaggaagga 303 Query: 216 ggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaacctc 275 ||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 304 ggccgagctgggcgagcgcctcagggagtgggagggcaagggcttccgcgtcaccggctc 363 Query: 276 cgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccgaacg 335 ||||||||| ||||||| |||| ||||||||| ||| || | |||||||||||| | Sbjct: 364 agtctgcgacgtctccgtgcgggggcagcgggaacgcatgctccgcgaggtcgccggcct 423 Query: 336 cttcggaggcaagctcaacatcctcgt 362 || ||| ||||||||| |||||||||| Sbjct: 424 ctacggtggcaagctcgacatcctcgt 450 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcggg 153 |||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 82 cggcaagacggccctcgtcaccggcggcacccgcggcatcggg 124
>ref|XM_463064.1| Oryza sativa (japonica cultivar-group), mRNA Length = 363 Score = 172 bits (87), Expect = 5e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 151 gggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgg 210 ||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| || Sbjct: 76 gggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagg 135 Query: 211 aaggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcaca 270 || ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 136 aacgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcacc 195 Query: 271 acctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgcc 330 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 196 ggctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcc 255 Query: 331 gaacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 256 agcctctacggtggcaagctcgacatccttgtaaa 290
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 146895 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 146836 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 146835 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 146776 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 146775 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 146716 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 146715 gcctctacggtggcaagctcgacatccttgtaaa 146682
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 8575122 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 8575063 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 8575062 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 8575003 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 8575002 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 8574943 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 8574942 gcctctacggtggcaagctcgacatccttgtaaa 8574909
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 96332 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 96273 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 96272 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 96213 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 96212 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 96153 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 96152 gcctctacggtggcaagctcgacatccttgtaaa 96119
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 170 bits (86), Expect = 2e-39 Identities = 182/214 (85%) Strand = Plus / Minus Query: 152 ggcgtgcggtggtggaggagcttgccgcgctgggggcggccgtgcacacctgctcccgga 211 |||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct: 4918 ggcgtgcggtggtggacgagctggcggcgctgggggcggccgtgcatacctgctccagga 4859 Query: 212 aggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttccgcgtcacaa 271 | ||||| ||||| ||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct: 4858 acgaggccgagctgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccg 4799 Query: 272 cctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggcgaggtcgccg 331 ||| ||| ||||| ||||||||||||| |||| ||| ||| || | ||||||||||| Sbjct: 4798 gctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgcca 4739 Query: 332 aacgcttcggaggcaagctcaacatcctcgtaaa 365 | || ||| ||||||||| ||||||| ||||| Sbjct: 4738 gcctctacggtggcaagctcgacatccttgtaaa 4705
>gb|AY110052.1| Zea mays CL33106_1 mRNA sequence Length = 1111 Score = 143 bits (72), Expect = 5e-31 Identities = 141/164 (85%) Strand = Plus / Minus Query: 202 tgctcccggaaggaggcggagcttggcgagcgcctcaaggagtgggaggccaggggcttc 261 ||||||||||||| || |||||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 888 tgctcccggaaggcggaggagctcggcgagcgcatcaaggagtgggaggccaggggattc 829 Query: 262 cgcgtcacaacctccgtctgcgacctctccgtccgggagcagcgggagcgcctgattggc 321 |||| || ||||||||||||||||||| |||| ||||||||||| || | || Sbjct: 828 agcgttaccgggtccgtctgcgacctctccgagagggaccagcgggagcggttgctccgc 769 Query: 322 gaggtcgccgaacgcttcggaggcaagctcaacatcctcgtaaa 365 ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 768 gaggttgccgaccgcttcggcggcaagctcaacatcctcgtaaa 725 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 109 cacggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcggtggtggag 168 |||||||| || || ||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 981 cacggcaagacagccctcgtcaccggcggcacccgcggcatcgggcgtgcggtagtggag 922 Query: 169 g 169 | Sbjct: 921 g 921
>ref|NM_190019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcggtggtggagga 170 |||||| ||||| ||||||||||| |||||| || |||||||| ||| | |||||||| Sbjct: 51 cggcaagacggcgctcgtcaccggcggcaccaaaggcatcgggcgcgcgatcgtggagga 110 Query: 171 gcttgccg 178 ||| |||| Sbjct: 111 gctcgccg 118
>ref|NM_190020.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 834 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccggaggcacccgcgggatcgggcgtgcggtggtggagga 170 |||||| ||||| ||||||||||| |||||| || |||||||| ||| | |||||||| Sbjct: 39 cggcaagacggcgctcgtcaccggcggcaccaagggcatcgggcgcgcgatcgtggagga 98 Query: 171 gcttgccg 178 ||| |||| Sbjct: 99 gctcgccg 106
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 125 tcgtcaccggaggcacccgcgggatcgg 152 ||||||||||||| |||||||||||||| Sbjct: 492669 tcgtcaccggagggacccgcgggatcgg 492642
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 125 tcgtcaccggaggcacccgcgggatcgg 152 |||||||||| ||||||||||||||||| Sbjct: 2940065 tcgtcaccggcggcacccgcgggatcgg 2940092
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 127 gtcaccggaggcacccgcgggatcggg 153 |||||||| |||||||||||||||||| Sbjct: 154243 gtcaccggcggcacccgcgggatcggg 154269
>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1, vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD, vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO, vinP1), partial and complete cds Length = 64492 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 gtcaccggaggcacccgcgggatcgg 152 ||||||||||||||| |||||||||| Sbjct: 20017 gtcaccggaggcaccggcgggatcgg 20042
>ref|NM_128472.1| Arabidopsis thaliana oxidoreductase AT2G29150 mRNA, complete cds Length = 807 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ctcaacatcctcgtaaataat 369 ||||||||||||||||||||| Sbjct: 289 ctcaacatcctcgtaaataat 309
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 125 tcgtcaccggaggcacccgcgggatcggg 153 |||||||||| |||| ||||||||||||| Sbjct: 2369850 tcgtcaccggcggcagccgcgggatcggg 2369878
>emb|CR697510.2|CNS0G15E Tetraodon nigroviridis full-length cDNA Length = 1040 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctccgtctgcgacctctccgt 293 ||||||||||||||||||||| Sbjct: 517 ctccgtctgcgacctctccgt 537
>emb|CR697529.1|CNS0G15X Tetraodon nigroviridis full-length cDNA Length = 987 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctccgtctgcgacctctccgt 293 ||||||||||||||||||||| Sbjct: 489 ctccgtctgcgacctctccgt 509
>gb|DQ056552.1| Arabidopsis thaliana putative tropinone reductase/tropine dehydrogenase (At2g29150) mRNA, complete cds Length = 807 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ctcaacatcctcgtaaataat 369 ||||||||||||||||||||| Sbjct: 289 ctcaacatcctcgtaaataat 309
>gb|AC010319.10| Homo sapiens chromosome 19 clone CTD-2521M24, complete sequence Length = 141370 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cccggaaggaggcggagcttg 226 ||||||||||||||||||||| Sbjct: 108572 cccggaaggaggcggagcttg 108592
>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete sequence Length = 34644 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 124 ctcgtcaccggaggcacccgcgggatcgg 152 ||||||||||||| |||| |||||||||| Sbjct: 5470 ctcgtcaccggagccaccagcgggatcgg 5498
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 118 acggctctcgtcaccggaggcacccgcgggatcgggcgtgc 158 |||| |||||||||||| ||||| ||||| ||||| ||||| Sbjct: 41041 acggttctcgtcaccggcggcacgcgcggcatcggccgtgc 41081
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 128 tcaccggaggcacccgcgggatcgggcg 155 ||||||| |||| ||||||||||||||| Sbjct: 3264672 tcaccggcggcaaccgcgggatcgggcg 3264645
>ref|XM_482410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2760 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gagcgcctcaaggagtggga 248 |||||||||||||||||||| Sbjct: 1480 gagcgcctcaaggagtggga 1499
>ref|XM_472499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ccgggagcagcgggagcgcc 313 |||||||||||||||||||| Sbjct: 58 ccgggagcagcgggagcgcc 39
>ref|XM_413934.1| PREDICTED: Gallus gallus similar to D-glucuronyl C5 epimerase (LOC415566), mRNA Length = 3939 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcgggccgatggctgcggc 59 |||||||||||||||||||| Sbjct: 773 ggcgggccgatggctgcggc 792
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cttggcgagcgcctcaagga 242 |||||||||||||||||||| Sbjct: 2166813 cttggcgagcgcctcaagga 2166832
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ccgggagcagcgggagcgcc 313 |||||||||||||||||||| Sbjct: 160743 ccgggagcagcgggagcgcc 160724
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 cggcaaaacggctctcgtcaccgg 134 |||||||||||| ||||||||||| Sbjct: 1774248 cggcaaaacggcactcgtcaccgg 1774271
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 tcgtcaccggaggcacccgcgggatcgg 152 ||||||||||||||| |||||| ||||| Sbjct: 203619 tcgtcaccggaggcagccgcggcatcgg 203592
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tggaggagcttgccgcgctg 183 |||||||||||||||||||| Sbjct: 383716 tggaggagcttgccgcgctg 383735
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ccgggagcagcgggagcgcc 313 |||||||||||||||||||| Sbjct: 21347269 ccgggagcagcgggagcgcc 21347250
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gagcgcctcaaggagtggga 248 |||||||||||||||||||| Sbjct: 19907956 gagcgcctcaaggagtggga 19907937
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 tcgtcaccggaggcacccgcgggatcgg 152 ||||||||||||||| |||||| ||||| Sbjct: 160726 tcgtcaccggaggcagccgcggcatcgg 160699
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gagcgcctcaaggagtggga 248 |||||||||||||||||||| Sbjct: 76134 gagcgcctcaaggagtggga 76115
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ggttggcgggccgatggctgcggc 59 ||||| |||||||||||||||||| Sbjct: 2093016 ggttgtcgggccgatggctgcggc 2093039
>dbj|AK105675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A11, full insert sequence Length = 1518 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gagcgcctcaaggagtggga 248 |||||||||||||||||||| Sbjct: 30 gagcgcctcaaggagtggga 49
>ref|NM_208771.1| Eremothecium gossypii ACR015Wp (ACR015W), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tggaggagcttgccgcgctg 183 |||||||||||||||||||| Sbjct: 587 tggaggagcttgccgcgctg 606
>dbj|AK064144.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-C02, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gagcgcctcaaggagtggga 248 |||||||||||||||||||| Sbjct: 1536 gagcgcctcaaggagtggga 1555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,178,178 Number of Sequences: 3902068 Number of extensions: 2178178 Number of successful extensions: 127623 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126610 Number of HSP's gapped (non-prelim): 1009 length of query: 369 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 347 effective length of database: 17,147,199,772 effective search space: 5950078320884 effective search space used: 5950078320884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
