ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13o06 |
|---|---|
| Clone Library Name | barley_pub |
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 60.8 bits (146), Expect = 3e-09 Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%) Frame = +2 Query: 125 KVFEAILEETGKLREEMKEDISIAKAIAIVLERNP--HLRREGIAHDVLQWYLCRMEGWF 298 K ++ + E GKL E+++E LE NP + +L W+ +E Sbjct: 493 KEYDELAETQGKLEEKLQE-----------LEANPPSDVYLSSRDRQILDWHFANLEFAN 541 Query: 299 ATDADAISLQCWDQ--EVLLPGGHGLMVRGYRPVINTLAKGLDIRLGHRVVEIVRHWNRV 472 AT +SL+ WDQ + G H + GY V LA+GLDI+L V ++ + Sbjct: 542 ATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC 601 Query: 473 EV----TVSNGKTFV--ADAAVITVPLGVLKSN--TIKFEP 571 EV T S +TF+ DA + T+PLGVLK ++F P Sbjct: 602 EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVP 642 Score = 36.6 bits (83), Expect = 0.053 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 71 LYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEM------KEDISIAKAIAIVLE-RNP 229 LY+ NG VP+E E + + F +LE T L ++ + +S+ +A+ +V++ + Sbjct: 363 LYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEK 422 Query: 230 HLRREGIAH 256 H++ E I H Sbjct: 423 HVKDEQIEH 431
>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) Length = 852 Score = 60.8 bits (146), Expect = 3e-09 Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%) Frame = +2 Query: 125 KVFEAILEETGKLREEMKEDISIAKAIAIVLERNP--HLRREGIAHDVLQWYLCRMEGWF 298 K ++ + E GKL E+++E LE NP + +L W+ +E Sbjct: 492 KEYDELAETQGKLEEKLQE-----------LEANPPSDVYLSSRDRQILDWHFANLEFAN 540 Query: 299 ATDADAISLQCWDQ--EVLLPGGHGLMVRGYRPVINTLAKGLDIRLGHRVVEIVRHWNRV 472 AT +SL+ WDQ + G H + GY V LA+GLDI+L V ++ + Sbjct: 541 ATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC 600 Query: 473 EV----TVSNGKTFV--ADAAVITVPLGVLKSN--TIKFEP 571 EV T S +TF+ DA + T+PLGVLK ++F P Sbjct: 601 EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVP 641 Score = 36.6 bits (83), Expect = 0.053 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 71 LYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEM------KEDISIAKAIAIVLE-RNP 229 LY+ NG VP+E E + + F +LE T L ++ + +S+ +A+ +V++ + Sbjct: 362 LYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEK 421 Query: 230 HLRREGIAH 256 H++ E I H Sbjct: 422 HVKDEQIEH 430
>LSDA_DROME (Q9VW97) Possible lysine-specific histone demethylase 1 (EC| 1.-.-.-) Length = 890 Score = 58.2 bits (139), Expect = 2e-08 Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 18/122 (14%) Frame = +2 Query: 260 VLQWYLCRMEGWFATDADAISLQCWDQE--VLLPGGHGLMVRGYRPVINTLAKGLDIRLG 433 +L W+ +E AT + +SL+ WDQ+ G H + GY V L + LDIR+ Sbjct: 521 ILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVN 580 Query: 434 HRVVEIVRHWNRVEVTVSNGK------TFVADAAVITVPLGVLK----------SNTIKF 565 V EI VEV N K T+ AD V T+ LGVLK SNT+KF Sbjct: 581 SAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKF 640 Query: 566 EP 571 +P Sbjct: 641 DP 642
>PAOX_MOUSE (Q8C0L6) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) Length = 503 Score = 38.5 bits (88), Expect = 0.014 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 27/192 (14%) Frame = +2 Query: 71 LYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDIS---------IAKAIAIVLER 223 ++ ++G+ V E + E+ ++F ++E T + E + ++ I++ +A E Sbjct: 105 IWSSSGTSVSLELMTEMARLFYGLIERTREFLNESETPMASVGEFLKKEISQQVASWTED 164 Query: 224 NPHLRREGIAHDVLQWYL---CRMEGWFATDADAISLQCWDQEVLLPGGHGLMVRGYRPV 394 + R+ +A +L + C + G + D ++L + + +LPG ++ GY+ + Sbjct: 165 DEDTRKRKLA--ILNTFFNIECCVSGTHSMDL--VALAPFGEYTVLPGLDCILAGGYQGL 220 Query: 395 INTLAKGL--DIRLGHRVVEIVRHWNR-------------VEVTVSNGKTFVADAAVITV 529 + + L D + V+ + HWN V V +G A ++TV Sbjct: 221 TDRILASLPKDTVAFDKPVKTI-HWNGSFQEAAFPGETFPVLVECEDGARLPAHHVIVTV 279 Query: 530 PLGVLKSNTIKF 565 PLG LK + F Sbjct: 280 PLGFLKEHQDTF 291
>AMX1_CAEEL (Q21988) Amine oxidase family member 1| Length = 783 Score = 37.7 bits (86), Expect = 0.024 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = +2 Query: 260 VLQWYLCRMEGWFATDADAISLQCWDQEVLL---PGGHGLMVRGYRPVINTLAKGLDIRL 430 +L ++L +E T +S + +D G H ++ G + +I+ LA GLDIRL Sbjct: 475 LLDFHLGNLEFSCGTHVSNLSAKDYDHNEKFGNFAGEHAVITDGAQRIIDFLATGLDIRL 534 Query: 431 GHRV--VEIVRHWNRVEVTVSNGKTFVA--DAAVITVPLGVLKSNTIK 562 V ++ R +V++ N + D VIT L VLKSN K Sbjct: 535 NCPVKCIDWGRDDRKVKIFFENAEQAAEEFDKVVITTSLSVLKSNHSK 582
>PAOX_BOVIN (Q865R1) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) (Fragments) Length = 492 Score = 35.8 bits (81), Expect = 0.090 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 25/189 (13%) Frame = +2 Query: 74 YDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHLRREGIA 253 Y ++G V E V E+ +F +++++T RE ++ + ++ L+ G Sbjct: 96 YASSGVSVSLELVAEMASLFYSLIDQT---REFLQAAETTPPSVGEYLKEKIRQHMAGWT 152 Query: 254 HD--VLQWYLCRMEGWFATDA--------DAISLQCWDQEVLLPGGHGLMVRGYRPVINT 403 D + L ++ F + D ++L + + +LPG GY+ + + Sbjct: 153 EDEETKKLKLAILKNLFNVECCVSGTHSMDLVALAPFGEYTVLPGLDCTFPEGYQGLTDC 212 Query: 404 LAKGL--DIRLGHRVVEIVRHWNR-------------VEVTVSNGKTFVADAAVITVPLG 538 + L D+ + + V+ + HWN V V +G F A V+TVPLG Sbjct: 213 IMASLPKDVMVFDKPVKTI-HWNGSFREASAPGETFPVLVECEDGDCFPAHHVVVTVPLG 271 Query: 539 VLKSNTIKF 565 K + F Sbjct: 272 FFKKHLDTF 280
>PAOX_HUMAN (Q6QHF9) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) Length = 648 Score = 35.4 bits (80), Expect = 0.12 Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 25/189 (13%) Frame = +2 Query: 74 YDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHLRREGIA 253 Y ++G+ V + V E+ +F ++++T RE + + ++ L++ G Sbjct: 252 YASSGASVSLQLVAEMATLFYGLIDQT---REFLHAAETPVPSVGEYLKKEIGQHVAGWT 308 Query: 254 HD--VLQWYLCRMEGWFATDA--------DAISLQCWDQEVLLPGGHGLMVRGYRPVINT 403 D + L + +F + D ++L + + +LPG +GY+ + N Sbjct: 309 EDEETRKLKLAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNC 368 Query: 404 LAKGL--DIRLGHRVVEIVRHWNR-------------VEVTVSNGKTFVADAAVITVPLG 538 + L D + + V+ + HWN V V +G F A ++TVPLG Sbjct: 369 MMAALPEDTVVFEKPVKTI-HWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLG 427 Query: 539 VLKSNTIKF 565 L+ + F Sbjct: 428 FLREHLDTF 436
>YDU2_SCHPO (O13863) Hypothetical protein C1B1.02c in chromosome I| Length = 537 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 349 KNFLIPTLERDGICISSKPTLHAAQIPLENIMCNPFSPQVWISLQNNC-NGLSYRNIFL 176 +N I TL+ DG+C+S+ A + +C+P P + IS C + LS+R I L Sbjct: 388 ENEYITTLQSDGVCVSTPTGSTAYSVAAGGSLCHPGIPAILISA--ICPHSLSFRPIIL 444
>HIF1A_BOVIN (Q9XTA5) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1| alpha) Length = 823 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -3 Query: 375 TMRPCPPGRRTS*SQHWSEMASASVANQPSMRHKYHWRTSCAIPSRLKCGFLSKTIAMAL 196 T+ P R T+ S W + + Q M K T IPS L C L +++ + Sbjct: 733 TLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQK----TIILIPSDLACRLLGQSMDESG 788 Query: 195 AIEISSFISSLNLPVSSS 142 +++S+ +N P+ S Sbjct: 789 LPQLTSYDCEVNAPIQGS 806
>PAO_MAIZE (O64411) Polyamine oxidase precursor (EC 1.5.3.11)| Length = 500 Score = 30.8 bits (68), Expect = 2.9 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 13/79 (16%) Frame = +2 Query: 377 RGYRPVINTLA-----------KGLDIRLG-HRVVEIVRHW-NRVEVTVSNGKTFVADAA 517 RGY V+ LA K +D RL ++VV +++ V V + + AD Sbjct: 231 RGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYV 290 Query: 518 VITVPLGVLKSNTIKFEPR 574 +++ LGVL+S+ I+F+P+ Sbjct: 291 MVSASLGVLQSDLIQFKPK 309
>MURD_NEIMA (Q9JSZ5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 445 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +2 Query: 68 ALYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHL 235 A YD +++ E V +IGK+F+ ++ TG+L++ + I + ER P + Sbjct: 32 AAYD---AELKPERVSQIGKMFDGLVFYTGRLKDALSNGFDILALSPGISERQPDI 84
>MURD_NEIMB (Q9K0Y4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 445 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +2 Query: 68 ALYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHL 235 A YD +++ E V +IGK+F+ ++ TG+L++ + I + ER P + Sbjct: 32 AAYD---AELKPERVSQIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDI 84
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 30.4 bits (67), Expect = 3.8 Identities = 13/23 (56%), Positives = 20/23 (86%) Frame = -3 Query: 171 SSLNLPVSSSIASNTFPISSTNS 103 SS+N+P+SS AS+TFP +S++S Sbjct: 919 SSVNMPLSSLAASSTFPAASSSS 941
>MURD_NEIG1 (Q5F6L6) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 445 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +2 Query: 68 ALYDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHL 235 A YD +++ E V +IGK+F+ ++ TG+L++ + I + ER P + Sbjct: 32 AAYD---AELKAERVAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDI 84
>ROK1_EMENI (Q5BET6) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 742 Score = 30.0 bits (66), Expect = 4.9 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +2 Query: 74 YDTNGSQVPQEFVEEIGKVFEAILEETGKLREEMKEDISIAKAIAIVLERNPHLRREGIA 253 YD S P +V +G+ A E + KEDI K+IA +++ + LR E Sbjct: 586 YDIPNS--PAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANIIDVSEKLRGENGE 643 Query: 254 HDVLQWYL 277 V +W L Sbjct: 644 RSVQKWLL 651
>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3 subunit)| Length = 1581 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +1 Query: 199 GHCNCFGEKSTLEARRDCT*CSPVVFVPHGGLVCY*CRCH 318 G C C S RDC+ CSP + G C C+CH Sbjct: 896 GQCVCLPYVSG----RDCSRCSPGFYDLQSGRGCQSCKCH 931
>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)| Length = 1609 Score = 29.6 bits (65), Expect = 6.4 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 10/62 (16%) Frame = -3 Query: 258 SCAIPSRLKCGFLSKTIAMALAIEISSFI---------SSLNL-PVSSSIASNTFPISST 109 S ++PS F S T+ A A+ S+FI SSL+L PVSSSI + F SS+ Sbjct: 1296 STSLPSP---AFTSSTLPTATAVSSSTFIASSLPLSSKSSLSLSPVSSSILMSQFSSSSS 1352 Query: 108 NS 103 +S Sbjct: 1353 SS 1354
>RK22_PEA (P23408) 50S ribosomal protein L22, chloroplast precursor (CL22)| Length = 204 Score = 29.6 bits (65), Expect = 6.4 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = -3 Query: 564 NLMVFDLRTPNGTVMTAASATNVLPLLTVT---STLFQCRTISTTL*PRRISRPFANVFI 394 NL+ F + + +++S+ N + L TVT F CR +T L + ++P+A + Sbjct: 29 NLLKFPIPSSARIRCSSSSSFNDISLKTVTPDNKNSFVCRFNATQLEVQETNQPYAETYA 88 Query: 393 TGRYPR 376 GR+ R Sbjct: 89 VGRHIR 94
>GIT1_RAT (Q9Z272) ARF GTPase-activating protein GIT1 (G protein-coupled| receptor kinase-interactor 1) (GRK-interacting protein 1) (Cool-associated and tyrosine-phosphorylated protein 1) (Cat-1) Length = 770 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 415 SRYTPWSQGC*NCSALE*SRGYCKQW*NICCGCCSHHRSVG--CS*IKH 555 SR P ++ C +CSA + + +C CCS HRS+G S +KH Sbjct: 2 SRKGPRAEVCADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKH 50
>GIT1_MOUSE (Q68FF6) ARF GTPase-activating protein GIT1 (G protein-coupled| receptor kinase-interactor 1) (GRK-interacting protein 1) Length = 770 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 415 SRYTPWSQGC*NCSALE*SRGYCKQW*NICCGCCSHHRSVG--CS*IKH 555 SR P ++ C +CSA + + +C CCS HRS+G S +KH Sbjct: 2 SRKGPRAEVCADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKH 50
>GIT1_HUMAN (Q9Y2X7) ARF GTPase-activating protein GIT1 (G protein-coupled| receptor kinase-interactor 1) (GRK-interacting protein 1) (Cool-associated and tyrosine-phosphorylated protein 1) (Cat-1) Length = 761 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 415 SRYTPWSQGC*NCSALE*SRGYCKQW*NICCGCCSHHRSVG--CS*IKH 555 SR P ++ C +CSA + + +C CCS HRS+G S +KH Sbjct: 2 SRKGPRAEVCADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKH 50
>UPPS_DEIRA (Q9RRP1) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP| synthetase) (Di-trans,poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) Length = 274 Score = 29.3 bits (64), Expect = 8.4 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -2 Query: 391 WTISTNHETMSTRKKNFLIPTLERDGICISSKPTLHAAQIPLENI-MCNPFSPQVWISLQ 215 W +ST++ + + ++ LER+ ++ P +HA ++ + I + F PQV +L Sbjct: 91 WVLSTDNGSREPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALN 150 Query: 214 N 212 N Sbjct: 151 N 151
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 29.3 bits (64), Expect = 8.4 Identities = 25/94 (26%), Positives = 40/94 (42%) Frame = -3 Query: 444 TTL*PRRISRPFANVFITGRYPRTMRPCPPGRRTS*SQHWSEMASASVANQPSMRHKYHW 265 T++ ++ S P + ++ P P +S SQ S SAS + +H Sbjct: 424 TSVLQQKNSAPLSQAEAKQELDKSAVPAPSEHDSSASQSTSLSLSASSQLLSTEKHPGSE 483 Query: 264 RTSCAIPSRLKCGFLSKTIAMALAIEISSFISSL 163 +S AIP C SK +A L E S +++L Sbjct: 484 LSSKAIPVSTSCPSASKQLAPPLTAESHSSVNAL 517
>RAPA_VIBCH (Q9KP70) RNA polymerase-associated protein rapA (EC 3.6.1.-)| (ATP-dependent helicase hepA) Length = 969 Score = 29.3 bits (64), Expect = 8.4 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 11/94 (11%) Frame = +2 Query: 14 YRTSGDDSVL---FDHDLESYALYDTNGSQVPQEFVEEI--------GKVFEAILEETGK 160 Y T ++L F L ++A G V F E + G+ E I+EE+ K Sbjct: 614 YLTETSQAILARWFQEGLNAFAETCPTGRAVYDAFAERLIPILAAGGGEELEVIIEESAK 673 Query: 161 LREEMKEDISIAKAIAIVLERNPHLRREGIAHDV 262 L + +K + + + + + N + + IA + Sbjct: 674 LNKTLKSQLEVGRDRLLEMHSNGGEKAQQIAEQI 707
>LAMC3_HUMAN (Q9Y6N6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3| subunit) Length = 1587 Score = 29.3 bits (64), Expect = 8.4 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 199 GHCNCFGEKSTLEARRDCT*CSPVVFVPHGGLVCY*CRCH 318 G C+C + RDC+ C P F G C C+CH Sbjct: 885 GQCSCLPHVTA----RDCSRCYPGFFDLQPGRGCRSCKCH 920
>WAPA_BACSU (Q07833) Wall-associated protein precursor| Length = 2334 Score = 29.3 bits (64), Expect = 8.4 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +2 Query: 29 DDSVLFDHDLESYALYDTNGSQVPQEFVEEIGKVFEAILEETGKLREE 172 DD L + L + + YD+NG+ V +E +E+G +ETGK E Sbjct: 1599 DDIRLIEGSLLTKSTYDSNGNYVTKE-EDELGYATSTDYDETGKKTSE 1645 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,006,511 Number of Sequences: 219361 Number of extensions: 1962102 Number of successful extensions: 5942 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 5724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5931 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
