| Clone Name | baal13o06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473940.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 581 bits (293), Expect = e-162 Identities = 491/557 (88%) Strand = Plus / Plus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagagttatgca 70 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 277 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagagttatgct 336 Query: 71 ctttatgacactaatggctctcaagtcccacaagagtttgtagaagagataggaaaagtg 130 || ||||||||||| ||| |||||| || |||||| | |||||| ||||||| || || Sbjct: 337 ctctatgacactaagggccatcaagttccccaagagctggtagaaaagatagggaaggtt 396 Query: 131 tttgaggctatactggaagagactggcaaattaagggaagaaatgaaggaagatatttct 190 |||||| ||||| ||||||||||||||||| | |||||||||| |||||||| |||||| Sbjct: 397 tttgagactatattggaagagactggcaaactgagggaagaaactaaggaagacatttct 456 Query: 191 atagctaaggccattgcaattgttttggagagaaatccacacttgaggcgagaagggatt 250 || || |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 457 attgcgaaggccattgcaattgttatggagagaaatccacacttgaggcaagaagggatt 516 Query: 251 gcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatgca 310 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 517 gctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgctactgatgcg 576 Query: 311 gatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtctc 370 || || ||||| || || ||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 577 gacgcaatctctcttcagggttgggaccaggaggtactgcttcctggtggccatggtctc 636 Query: 371 atggttcgtggatatcgtccagttataaatacgttggcaaaaggtctagatatacgcctt 430 ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 637 atggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagatatacgcctt 696 Query: 431 ggtcacagggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaat 490 || |||||||||||||| |||||||| ||| ||||||| || |||||||||||||||| | Sbjct: 697 ggccacagggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagt 756 Query: 491 ggtaaaacatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatca 550 |||||||||||||||||||||||||||||||| | || || || |||||||||||| || Sbjct: 757 ggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagca 816 Query: 551 aacaccattaagtttga 567 ||||||||||| ||||| Sbjct: 817 aacaccattaaatttga 833
>dbj|AK067242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095J23, full insert sequence Length = 1565 Score = 581 bits (293), Expect = e-162 Identities = 491/557 (88%) Strand = Plus / Plus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagagttatgca 70 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 14 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagagttatgct 73 Query: 71 ctttatgacactaatggctctcaagtcccacaagagtttgtagaagagataggaaaagtg 130 || ||||||||||| ||| |||||| || |||||| | |||||| ||||||| || || Sbjct: 74 ctctatgacactaagggccatcaagttccccaagagctggtagaaaagatagggaaggtt 133 Query: 131 tttgaggctatactggaagagactggcaaattaagggaagaaatgaaggaagatatttct 190 |||||| ||||| ||||||||||||||||| | |||||||||| |||||||| |||||| Sbjct: 134 tttgagactatattggaagagactggcaaactgagggaagaaactaaggaagacatttct 193 Query: 191 atagctaaggccattgcaattgttttggagagaaatccacacttgaggcgagaagggatt 250 || || |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 194 attgcgaaggccattgcaattgttatggagagaaatccacacttgaggcaagaagggatt 253 Query: 251 gcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatgca 310 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 254 gctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgctactgatgcg 313 Query: 311 gatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtctc 370 || || ||||| || || ||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 314 gacgcaatctctcttcagggttgggaccaggaggtactgcttcctggtggccatggtctc 373 Query: 371 atggttcgtggatatcgtccagttataaatacgttggcaaaaggtctagatatacgcctt 430 ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 374 atggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagatatacgcctt 433 Query: 431 ggtcacagggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaat 490 || |||||||||||||| |||||||| ||| ||||||| || |||||||||||||||| | Sbjct: 434 ggccacagggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagt 493 Query: 491 ggtaaaacatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatca 550 |||||||||||||||||||||||||||||||| | || || || |||||||||||| || Sbjct: 494 ggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagca 553 Query: 551 aacaccattaagtttga 567 ||||||||||| ||||| Sbjct: 554 aacaccattaaatttga 570
>dbj|AK064902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L17, full insert sequence Length = 2329 Score = 573 bits (289), Expect = e-160 Identities = 490/557 (87%) Strand = Plus / Plus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagagttatgca 70 ||||| ||||| |||||||||| ||| || || ||||| ||||| || ||||||||||| Sbjct: 812 ctgtatcgcacaagtggagatggctctgtgctgtttgatcatgaccttgagagttatgct 871 Query: 71 ctttatgacactaatggctctcaagtcccacaagagtttgtagaagagataggaaaagtg 130 || ||||||||||| ||| |||||| || |||||| | |||||| ||||||| || || Sbjct: 872 ctctatgacactaagggccatcaagttccccaagagctggtagaaaagatagggaaggtt 931 Query: 131 tttgaggctatactggaagagactggcaaattaagggaagaaatgaaggaagatatttct 190 |||||| ||||| ||||||||||||||||| | |||||||||| |||||||| |||||| Sbjct: 932 tttgagactatattggaagagactggcaaactgagggaagaaactaaggaagacatttct 991 Query: 191 atagctaaggccattgcaattgttttggagagaaatccacacttgaggcgagaagggatt 250 || || |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 992 attgcgaaggccattgcaattgttatggagagaaatccacacttgaggcaagaagggatt 1051 Query: 251 gcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatgca 310 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1052 gctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgctactgatgcg 1111 Query: 311 gatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtctc 370 || || ||||| || || ||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 1112 gacgcaatctctcttcagggttgggaccaggaggtactgcttcctggtggccatggtctc 1171 Query: 371 atggttcgtggatatcgtccagttataaatacgttggcaaaaggtctagatatacgcctt 430 ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 1172 atggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagatatacgcctt 1231 Query: 431 ggtcacagggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaat 490 || |||||||||||||| |||||||| ||| ||||||| || |||||||||||||||| | Sbjct: 1232 ggccacagggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagt 1291 Query: 491 ggtaaaacatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatca 550 |||||||||||||||||||||||||||||||| | || || || |||||||||||| || Sbjct: 1292 ggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagca 1351 Query: 551 aacaccattaagtttga 567 ||||||||||| ||||| Sbjct: 1352 aacaccattaaatttga 1368
>dbj|AK068767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168B07, full insert sequence Length = 3529 Score = 543 bits (274), Expect = e-151 Identities = 448/506 (88%) Strand = Plus / Plus Query: 62 agttatgcactttatgacactaatggctctcaagtcccacaagagtttgtagaagagata 121 |||||||| || ||||||||||| ||| |||||| || |||||| | |||||| ||||| Sbjct: 2057 agttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagata 2116 Query: 122 ggaaaagtgtttgaggctatactggaagagactggcaaattaagggaagaaatgaaggaa 181 || || || |||||| ||||| ||||||||||||||||| | |||||||||| |||||| Sbjct: 2117 gggaaggtttttgagactatattggaagagactggcaaactgagggaagaaactaaggaa 2176 Query: 182 gatatttctatagctaaggccattgcaattgttttggagagaaatccacacttgaggcga 241 || |||||||| || |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 2177 gacatttctattgcgaaggccattgcaattgttatggagagaaatccacacttgaggcaa 2236 Query: 242 gaagggattgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgct 301 ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 2237 gaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgct 2296 Query: 302 actgatgcagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtgga 361 |||||||| || || ||||| || || ||||||| ||||| || || ||||||||||| Sbjct: 2297 actgatgcggacgcaatctctcttcagggttgggaccaggaggtactgcttcctggtggc 2356 Query: 362 catggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaaggtctagat 421 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 2357 catggtctcatggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagat 2416 Query: 422 atacgccttggtcacagggttgttgaaattgttcggcactggaatagagtagaggttact 481 ||||||||||| |||||||||||||| |||||||| ||| ||||||| || ||||||||| Sbjct: 2417 atacgccttggccacagggttgttgagattgttcgccacaggaatagggtggaggttact 2476 Query: 482 gtaagcaatggtaaaacatttgttgcggatgctgcagtcatcaccgttccgttgggtgtt 541 ||||||| ||||||||||||||||||||||||||||||||| | || || || |||||| Sbjct: 2477 gtaagcagtggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgtt 2536 Query: 542 cttaaatcaaacaccattaagtttga 567 |||||| ||||||||||||| ||||| Sbjct: 2537 cttaaagcaaacaccattaaatttga 2562 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagag 63 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct: 1922 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagag 1974
>dbj|AK061831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D02, full insert sequence Length = 1142 Score = 200 bits (101), Expect = 4e-48 Identities = 155/173 (89%) Strand = Plus / Plus Query: 395 ataaatacgttggcaaaaggtctagatatacgccttggtcacagggttgttgaaattgtt 454 |||||||| |||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 3 ataaatactctggcaaaaggcctagatatacgccttggccacagggttgttgagattgtt 62 Query: 455 cggcactggaatagagtagaggttactgtaagcaatggtaaaacatttgttgcggatgct 514 || ||| ||||||| || |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 63 cgccacaggaatagggtggaggttactgtaagcagtggtaaaacatttgttgcggatgct 122 Query: 515 gcagtcatcaccgttccgttgggtgttcttaaatcaaacaccattaagtttga 567 |||||||| | || || || |||||||||||| ||||||||||||| ||||| Sbjct: 123 gcagtcattgctgtccccttaggtgttcttaaagcaaacaccattaaatttga 175
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Minus Query: 437 agggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaatggtaaa 496 ||||||||||| |||||||| ||| ||||||| || |||||||||||||||| ||||||| Sbjct: 119170 agggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagtggtaaa 119111 Query: 497 acatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatcaaacacc 556 |||||||||||||||||||||||||| | || || || |||||||||||| |||||||| Sbjct: 119110 acatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagcaaacacc 119051 Query: 557 attaagtttga 567 ||||| ||||| Sbjct: 119050 attaaatttga 119040 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 350 cttcctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggca 409 ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 119359 cttcctggtggccatggtctcatggttcgtggatatcgtccagtaataaatactctggca 119300 Query: 410 aaaggtctagatatacgccttggtcacagg 439 ||||| ||||||||||||||||| |||||| Sbjct: 119299 aaaggcctagatatacgccttggccacagg 119270 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 236 aggcgagaagggattgcacatgatgttctccagtggtatttgtgccgcatggagggttgg 295 |||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 119582 aggcaagaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttgg 119523 Query: 296 tttgctactgatgc 309 |||||||||||||| Sbjct: 119522 tttgctactgatgc 119509 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 150 agactggcaaattaagggaagaaatgaaggaagatatttctatagctaaggccattgcaa 209 ||||||||||| | |||||||||| |||||||| |||||||| || ||||||||||||| Sbjct: 119753 agactggcaaactgagggaagaaactaaggaagacatttctattgcgaaggccattgcaa 119694 Query: 210 ttgttttggagagaaatccacacttgagg 238 ||||| ||||||||||||||||||||||| Sbjct: 119693 ttgttatggagagaaatccacacttgagg 119665 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 62 agttatgcactttatgacactaatggctctcaagtcccacaagagtttgtagaagagata 121 |||||||| || ||||||||||| ||| |||||| || |||||| | |||||| ||||| Sbjct: 119928 agttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagata 119869 Query: 122 ggaaaagtgtttgaggctatactggaagag 151 || || || |||||| ||||| |||||||| Sbjct: 119868 gggaaggtttttgagactatattggaagag 119839 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagag 63 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct: 120063 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagag 120011
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Minus Query: 437 agggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaatggtaaa 496 ||||||||||| |||||||| ||| ||||||| || |||||||||||||||| ||||||| Sbjct: 37623 agggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagtggtaaa 37564 Query: 497 acatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatcaaacacc 556 |||||||||||||||||||||||||| | || || || |||||||||||| |||||||| Sbjct: 37563 acatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagcaaacacc 37504 Query: 557 attaagtttga 567 ||||| ||||| Sbjct: 37503 attaaatttga 37493 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 350 cttcctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggca 409 ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 37812 cttcctggtggccatggtctcatggttcgtggatatcgtccagtaataaatactctggca 37753 Query: 410 aaaggtctagatatacgccttggtcacagg 439 ||||| ||||||||||||||||| |||||| Sbjct: 37752 aaaggcctagatatacgccttggccacagg 37723 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 236 aggcgagaagggattgcacatgatgttctccagtggtatttgtgccgcatggagggttgg 295 |||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 38035 aggcaagaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttgg 37976 Query: 296 tttgctactgatgc 309 |||||||||||||| Sbjct: 37975 tttgctactgatgc 37962 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 150 agactggcaaattaagggaagaaatgaaggaagatatttctatagctaaggccattgcaa 209 ||||||||||| | |||||||||| |||||||| |||||||| || ||||||||||||| Sbjct: 38206 agactggcaaactgagggaagaaactaaggaagacatttctattgcgaaggccattgcaa 38147 Query: 210 ttgttttggagagaaatccacacttgagg 238 ||||| ||||||||||||||||||||||| Sbjct: 38146 ttgttatggagagaaatccacacttgagg 38118 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 62 agttatgcactttatgacactaatggctctcaagtcccacaagagtttgtagaagagata 121 |||||||| || ||||||||||| ||| |||||| || |||||| | |||||| ||||| Sbjct: 38381 agttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagata 38322 Query: 122 ggaaaagtgtttgaggctatactggaagag 151 || || || |||||| ||||| |||||||| Sbjct: 38321 gggaaggtttttgagactatattggaagag 38292 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagag 63 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct: 38516 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagag 38464
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Minus Query: 437 agggttgttgaaattgttcggcactggaatagagtagaggttactgtaagcaatggtaaa 496 ||||||||||| |||||||| ||| ||||||| || |||||||||||||||| ||||||| Sbjct: 31704353 agggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagtggtaaa 31704294 Query: 497 acatttgttgcggatgctgcagtcatcaccgttccgttgggtgttcttaaatcaaacacc 556 |||||||||||||||||||||||||| | || || || |||||||||||| |||||||| Sbjct: 31704293 acatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagcaaacacc 31704234 Query: 557 attaagtttga 567 ||||| ||||| Sbjct: 31704233 attaaatttga 31704223 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 350 cttcctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggca 409 ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 31704542 cttcctggtggccatggtctcatggttcgtggatatcgtccagtaataaatactctggca 31704483 Query: 410 aaaggtctagatatacgccttggtcacagg 439 ||||| ||||||||||||||||| |||||| Sbjct: 31704482 aaaggcctagatatacgccttggccacagg 31704453 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 236 aggcgagaagggattgcacatgatgttctccagtggtatttgtgccgcatggagggttgg 295 |||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 31704765 aggcaagaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttgg 31704706 Query: 296 tttgctactgatgc 309 |||||||||||||| Sbjct: 31704705 tttgctactgatgc 31704692 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 150 agactggcaaattaagggaagaaatgaaggaagatatttctatagctaaggccattgcaa 209 ||||||||||| | |||||||||| |||||||| |||||||| || ||||||||||||| Sbjct: 31704936 agactggcaaactgagggaagaaactaaggaagacatttctattgcgaaggccattgcaa 31704877 Query: 210 ttgttttggagagaaatccacacttgagg 238 ||||| ||||||||||||||||||||||| Sbjct: 31704876 ttgttatggagagaaatccacacttgagg 31704848 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 62 agttatgcactttatgacactaatggctctcaagtcccacaagagtttgtagaagagata 121 |||||||| || ||||||||||| ||| |||||| || |||||| | |||||| ||||| Sbjct: 31705111 agttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagata 31705052 Query: 122 ggaaaagtgtttgaggctatactggaagag 151 || || || |||||| ||||| |||||||| Sbjct: 31705051 gggaaggtttttgagactatattggaagag 31705022 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 11 ctgtaccgcaccagtggagatgactcggtcctttttgaccatgatctcgagag 63 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct: 31705246 ctgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagag 31705194
>ref|NM_115767.3| Arabidopsis thaliana oxidoreductase AT3G59050 mRNA, complete cds Length = 2039 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 884 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 943 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 944 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 1003 Query: 369 tcatggtt 376 | |||||| Sbjct: 1004 ttatggtt 1011 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 1135 tttgttgcggatgctgcagtcat 1157
>gb|AY143905.1| Arabidopsis thaliana At3g59050/F17J16_100 mRNA, complete cds Length = 1467 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 548 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 607 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 608 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 667 Query: 369 tcatggtt 376 | |||||| Sbjct: 668 ttatggtt 675 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 799 tttgttgcggatgctgcagtcat 821
>gb|AY065025.1| Arabidopsis thaliana AT3g59050/F17J16_100 mRNA, complete cds Length = 1900 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 866 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 925 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 926 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 985 Query: 369 tcatggtt 376 | |||||| Sbjct: 986 ttatggtt 993 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 1117 tttgttgcggatgctgcagtcat 1139
>emb|BX824794.1|CNS0A6RU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1846 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 857 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 916 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 917 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 976 Query: 369 tcatggtt 376 | |||||| Sbjct: 977 ttatggtt 984 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 1108 tttgttgcggatgctgcagtcat 1130
>gb|AY085634.1| Arabidopsis thaliana clone 16421 mRNA, complete sequence Length = 1868 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 858 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 917 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 918 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 977 Query: 369 tcatggtt 376 | |||||| Sbjct: 978 ttatggtt 985 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 1109 tttgttgcggatgctgcagtcat 1131
>emb|BX824926.1|CNS0A6ZP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1953 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||| ||||||||| || ||||||||| |||||| Sbjct: 885 ttgcccataatgtgcttcagtggtacttgttccgcatggaaggatggtttgctgctgatg 944 Query: 309 cagatgccatctcgctccaatgttgggatcaggaagttcttcttcctggtggacatggtc 368 | || |||||||| | |||||||||||||||| || | || ||||||||||||| Sbjct: 945 ctgaaaccatctcggcaaagtgttgggatcaggaagaactgttgcccggtggacatggtc 1004 Query: 369 tcatggtt 376 | |||||| Sbjct: 1005 ttatggtt 1012 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 1136 tttgttgcggatgctgcagtcat 1158
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16 Length = 89517 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 249 ttgcacatgatgttctccagtggtatttgtgccgcatggagggttggtttgctactgatg 308 |||| ||| |||| || |||||||| |||||||||||||| || ||||||||| |||||| Sbjct: 39335 ttgcccataatgtgcttcagtggtacttgtgccgcatggaaggatggtttgctgctgatg 39276 Query: 309 cagatgccatctcg 322 | || |||||||| Sbjct: 39275 ctgaaaccatctcg 39262 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 500 tttgttgcggatgctgcagtcat 522 ||||||||||||||||||||||| Sbjct: 38918 tttgttgcggatgctgcagtcat 38896
>ref|NM_129863.3| Arabidopsis thaliana amine oxidase/ oxidoreductase AT2G43020 mRNA, complete cds Length = 2110 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 495 aaacatttgttgcggatgctgcagtcat 522 |||| ||||||||||||||||||||||| Sbjct: 1233 aaacttttgttgcggatgctgcagtcat 1260 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 cctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaa 412 ||||||||||| ||||| |||||| | || |||||||| || || ||||| |||| ||| Sbjct: 1091 cctggtggacacggtcttatggttagagggtatcgtcctgtcatcaatactctggcgaaa 1150 Query: 413 ggtctagatat 423 ||||| ||||| Sbjct: 1151 ggtcttgatat 1161
>gb|AC006224.4| Arabidopsis thaliana chromosome 2 clone MFL8 map CIC10F02, complete sequence Length = 45714 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 495 aaacatttgttgcggatgctgcagtcat 522 |||| ||||||||||||||||||||||| Sbjct: 34961 aaacttttgttgcggatgctgcagtcat 34934 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 353 cctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaa 412 ||||||||||| ||||| |||||| | || |||||||| || || ||||| |||| ||| Sbjct: 35183 cctggtggacacggtcttatggttagagggtatcgtcctgtcatcaatactctggcgaaa 35124 Query: 413 ggtctagatat 423 ||||| ||||| Sbjct: 35123 ggtcttgatat 35113
>gb|AY074846.1| Arabidopsis thaliana At2g43020/MFL8.12 mRNA, complete cds Length = 2098 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 495 aaacatttgttgcggatgctgcagtcat 522 |||| ||||||||||||||||||||||| Sbjct: 1232 aaacttttgttgcggatgctgcagtcat 1259 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 cctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaa 412 ||||||||||| ||||| |||||| | || |||||||| || || ||||| |||| ||| Sbjct: 1090 cctggtggacacggtcttatggttagagggtatcgtcctgtcatcaatactctggcgaaa 1149 Query: 413 ggtctagatat 423 ||||| ||||| Sbjct: 1150 ggtcttgatat 1160
>gb|AF364952.1| Arabidopsis thaliana putative amine oxidase 1 mRNA, complete cds Length = 2030 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 495 aaacatttgttgcggatgctgcagtcat 522 |||| ||||||||||||||||||||||| Sbjct: 1151 aaacttttgttgcggatgctgcagtcat 1178 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 cctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaa 412 ||||||||||| ||||| |||||| | || |||||||| || || ||||| |||| ||| Sbjct: 1009 cctggtggacacggtcttatggttagagggtatcgtcctgtcatcaatactctggcgaaa 1068 Query: 413 ggtctagatat 423 ||||| ||||| Sbjct: 1069 ggtcttgatat 1079
>emb|BX820299.1|CNS0A7YF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1999 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 495 aaacatttgttgcggatgctgcagtcat 522 |||| ||||||||||||||||||||||| Sbjct: 1194 aaacttttgttgcggatgctgcagtcat 1221 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 cctggtggacatggtctcatggttcgtggatatcgtccagttataaatacgttggcaaaa 412 ||||||||||| ||||| |||||| | || |||||||| || || ||||| |||| ||| Sbjct: 1052 cctggtggacacggtcttatggttagagggtatcgtcctgtcatcaatactctggcgaaa 1111 Query: 413 ggtctagatat 423 ||||| ||||| Sbjct: 1112 ggtcttgatat 1122
>emb|AL157777.5| Human DNA sequence from clone RP11-76H14 on chromosome 6 Contains the HTR1E gene for 5-hydroxytryptamine (serotonin) receptor, a pseudogene similar to the 5' end of ST13 (suppression of tumorigenicity 13, a Hsp70-interacting protein), a pseudogene similar to the 5' end of a Tec protein-tyrosine kinase, a pseudogene similar to 60S ribosomal protein L7,a pseudogene similar to the bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase mitochondria and two CpG islands, complete sequence Length = 169669 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 432 gtcacagggttgttgaaattgtt 454 ||||||||||||||||||||||| Sbjct: 65256 gtcacagggttgttgaaattgtt 65278
>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7, complete sequence Length = 192578 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 aaattaagggaagaaatgaaggaagat 184 ||||||||||||||||| ||||||||| Sbjct: 72247 aaattaagggaagaaataaaggaagat 72221
>emb|BX005071.4| Zebrafish DNA sequence from clone CH211-139O14 in linkage group 7, complete sequence Length = 174225 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 158 aaattaagggaagaaatgaaggaagat 184 ||||||||||||||||| ||||||||| Sbjct: 166231 aaattaagggaagaaataaaggaagat 166257
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 158 aaattaagggaagaaatgaaggaaga 183 |||||||||||||||| ||||||||| Sbjct: 63185 aaattaagggaagaaaggaaggaaga 63160
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 158 aaattaagggaagaaatgaaggaaga 183 |||||||||||||||| ||||||||| Sbjct: 97141 aaattaagggaagaaaggaaggaaga 97166
>emb|AL137076.6| Human DNA sequence from clone RP5-893G23 on chromosome 1p34.2-36.11 Contains a novel gene, complete sequence Length = 89259 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 335 gatcaggaagttcttcttcctggtgg 360 ||||||||||||||||||||| |||| Sbjct: 71087 gatcaggaagttcttcttcctcgtgg 71112
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence Length = 238662 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 158 aaattaagggaagaaatgaaggaaga 183 |||||||||||||||| ||||||||| Sbjct: 65583 aaattaagggaagaaaggaaggaaga 65608
>gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosome 18, complete sequence Length = 195721 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 158 aaattaagggaagaaatgaaggaaga 183 |||||||||||||||| ||||||||| Sbjct: 2208 aaattaagggaagaaaggaaggaaga 2233
>emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 in linkage group 14, complete sequence Length = 167962 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 tgcaattgttttggagagaaat 226 |||||||||||||||||||||| Sbjct: 64866 tgcaattgttttggagagaaat 64887
>gb|AY665235.1| Saimiri boliviensis dishevelled 1 mRNA, partial cds Length = 2068 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 tatacgccttggtcacagggt 441 ||||||||||||||||||||| Sbjct: 1934 tatacgccttggtcacagggt 1914
>ref|XM_474303.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 17 cgcaccagtggagatgactcggtcctttttgaccatgatctcgagagttatgc 69 ||||||||||| ||| |||| || || | |||||||||||| ||||| ||||| Sbjct: 307 cgcaccagtggtgataactctgtgctatatgaccatgatctggagagctatgc 359
>gb|AC147706.3| Felis catus clone RP86-363G23, complete sequence Length = 142721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 acatggtctcatggttcgtgg 381 ||||||||||||||||||||| Sbjct: 44759 acatggtctcatggttcgtgg 44779
>gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, complete sequence Length = 149930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 aagggaagaaatgaaggaaga 183 ||||||||||||||||||||| Sbjct: 27487 aagggaagaaatgaaggaaga 27467
>emb|AL137782.9| Human DNA sequence from clone RP11-29G8 on chromosome 13q22.1-31.1 Contains part of the LMO7 gene for LIM domain only 7 (KIAA0858) and a novel pseudogene (FLJ13188, FLJ22977), complete sequence Length = 139252 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 agggaagaaatgaaggaagat 184 ||||||||||||||||||||| Sbjct: 28841 agggaagaaatgaaggaagat 28821
>gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complete sequence Length = 148673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 ttactgtaagcaatggtaaaa 497 ||||||||||||||||||||| Sbjct: 3091 ttactgtaagcaatggtaaaa 3071
>gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, complete sequence Length = 171338 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 aagggaagaaatgaaggaaga 183 ||||||||||||||||||||| Sbjct: 5479 aagggaagaaatgaaggaaga 5499
>gb|AC007955.4|AC007955 Homo sapiens chromosome 14 clone CTD-3014H8 and RP11-285P21 map 14q24.3, complete sequence Length = 163312 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 ttaagggaagaaatgaaggaa 181 ||||||||||||||||||||| Sbjct: 48836 ttaagggaagaaatgaaggaa 48816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 ttaagggaagaaatgaaggaa 181 ||||||||||||||||||||| Sbjct: 47116 ttaagggaagaaatgaaggaa 47096
>dbj|AK072414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K01, full insert sequence Length = 2113 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 17 cgcaccagtggagatgactcggtcctttttgaccatgatctcgagagttatgc 69 ||||||||||| ||| |||| || || | |||||||||||| ||||| ||||| Sbjct: 756 cgcaccagtggtgataactctgtgctatatgaccatgatctggagagctatgc 808
>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE Length = 211224 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 488 aatggtaaaacatttgttgcggatgctgc 516 ||||| |||||||||||||| |||||||| Sbjct: 90430 aatgggaaaacatttgttgctgatgctgc 90458 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 266 cagtggtatttgtgccgcatggagggttggtttgct 301 ||||||||||| ||| | |||||||| ||||||||| Sbjct: 89654 cagtggtatttatgcagaatggagggctggtttgct 89689
>emb|AL049832.3|CNS0000G Human chromosome 14 DNA sequence BAC R-63D17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177172 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 ttaagggaagaaatgaaggaa 181 ||||||||||||||||||||| Sbjct: 69735 ttaagggaagaaatgaaggaa 69755 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 ttaagggaagaaatgaaggaa 181 ||||||||||||||||||||| Sbjct: 68015 ttaagggaagaaatgaaggaa 68035
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gatgcagatgccatctcgct 324 |||||||||||||||||||| Sbjct: 128125 gatgcagatgccatctcgct 128106
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gatgcagatgccatctcgct 324 |||||||||||||||||||| Sbjct: 47285 gatgcagatgccatctcgct 47266
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ttgtagaagagataggaaaa 127 |||||||||||||||||||| Sbjct: 148337 ttgtagaagagataggaaaa 148356
>gb|AC087861.2| Felis catus clone RP86-49M22, complete sequence Length = 107365 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 catggtctcatggttcgtgg 381 |||||||||||||||||||| Sbjct: 178 catggtctcatggttcgtgg 197
>gb|AC087807.2| Felis catus clone RP86-294B21, complete sequence Length = 121506 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 catggtctcatggttcgtgg 381 |||||||||||||||||||| Sbjct: 101049 catggtctcatggttcgtgg 101068
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gaagaaatgaaggaagatat 186 |||||||||||||||||||| Sbjct: 19573951 gaagaaatgaaggaagatat 19573932
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cttcttcctggtggacatgg 366 |||||||||||||||||||| Sbjct: 134234 cttcttcctggtggacatgg 134253
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ttaagggaagaaatgaagga 180 |||||||||||||||||||| Sbjct: 14541 ttaagggaagaaatgaagga 14560
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttaagggaagaaatgaagga 180 |||||||||||||||||||| Sbjct: 28196 ttaagggaagaaatgaagga 28177
>gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, complete sequence Length = 198928 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cttcttcctggtggacatgg 366 |||||||||||||||||||| Sbjct: 37422 cttcttcctggtggacatgg 37441
>gb|AC112943.12| Mus musculus chromosome 16, clone RP23-424C7, complete sequence Length = 219990 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ttggagagaaatccacactt 234 |||||||||||||||||||| Sbjct: 159183 ttggagagaaatccacactt 159164
>emb|AL590621.10| Human DNA sequence from clone RP11-435B17 on chromosome 6, complete sequence Length = 117411 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agggaagaaatgaaggaaga 183 |||||||||||||||||||| Sbjct: 89951 agggaagaaatgaaggaaga 89932
>gb|AC091509.3| Felis catus clone RP86-468O8, complete sequence Length = 48957 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 catggtctcatggttcgtgg 381 |||||||||||||||||||| Sbjct: 22475 catggtctcatggttcgtgg 22456
>emb|AL080286.16|HSDJ655C4 Human DNA sequence from clone RP4-655C4 on chromosome 1p32.3-34.3 Contains a ferritin light polypeptide (FTL) pseudogene, complete sequence Length = 155278 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 gttgggtgttcttaaatcaaacac 555 ||||| |||||||||||||||||| Sbjct: 3281 gttggctgttcttaaatcaaacac 3258
>emb|AL132798.2|SPAC222 S.pombe chromosome I cosmid c222 Length = 37641 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggaagagactggcaaattaa 164 |||||||||||||||||||| Sbjct: 401 ggaagagactggcaaattaa 420
>emb|AL035064.1|SPAC1687 S.pombe chromosome I cosmid c1687 Length = 41757 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggaagagactggcaaattaa 164 |||||||||||||||||||| Sbjct: 39876 ggaagagactggcaaattaa 39895
>emb|BX572634.7| Zebrafish DNA sequence from clone DKEY-6H1 in linkage group 11, complete sequence Length = 202461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tctccagtggtatttgtgcc 281 |||||||||||||||||||| Sbjct: 35357 tctccagtggtatttgtgcc 35376
>gb|AC156991.9| Mus musculus chromosome 8, clone RP23-297F23, complete sequence Length = 164343 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 caaattaagggaagaaatga 176 |||||||||||||||||||| Sbjct: 71841 caaattaagggaagaaatga 71822
>ref|NM_001018536.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1687.21), partial mRNA Length = 630 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggaagagactggcaaattaa 164 |||||||||||||||||||| Sbjct: 603 ggaagagactggcaaattaa 622
>emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chromosome 2, complete sequence Length = 61741 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aagggaagaaatgaaggaag 182 |||||||||||||||||||| Sbjct: 30424 aagggaagaaatgaaggaag 30405
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gatgcagatgccatctcgct 324 |||||||||||||||||||| Sbjct: 14711831 gatgcagatgccatctcgct 14711812
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gaagaaatgaaggaagatat 186 |||||||||||||||||||| Sbjct: 19566978 gaagaaatgaaggaagatat 19566959
>gb|AC079354.4| Homo sapiens BAC clone RP11-1145F21 from 2, complete sequence Length = 162554 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aagggaagaaatgaaggaag 182 |||||||||||||||||||| Sbjct: 4478 aagggaagaaatgaaggaag 4497
>gb|AF299055.1|AF299055 Anaplasma ovis major surface protein 2 variant AOV6 gene, complete cds Length = 1236 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tttgctactgatgcagatgc 315 |||||||||||||||||||| Sbjct: 709 tttgctactgatgcagatgc 728
>gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130125 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aattaagggaagaaatgaag 178 |||||||||||||||||||| Sbjct: 86011 aattaagggaagaaatgaag 85992
>gb|AC016943.7|AC016943 Homo sapiens 3 BAC RP11-380G10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175992 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 atgttctccagtggtatttg 277 |||||||||||||||||||| Sbjct: 119318 atgttctccagtggtatttg 119299
>emb|AL954814.17| Zebrafish DNA sequence from clone DKEY-79I1 in linkage group 14, complete sequence Length = 175477 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tctccagtggtatttgtgcc 281 |||||||||||||||||||| Sbjct: 143289 tctccagtggtatttgtgcc 143270
>gb|AC118680.7| Mus musculus chromosome 8, clone RP24-381G7, complete sequence Length = 188031 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 caaattaagggaagaaatga 176 |||||||||||||||||||| Sbjct: 8167 caaattaagggaagaaatga 8186
>gb|AC091234.7| Oryza sativa chromosome 3 BAC OSJNBa0057E11 genomic sequence, complete sequence Length = 138716 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gaagaaatgaaggaagatat 186 |||||||||||||||||||| Sbjct: 101808 gaagaaatgaaggaagatat 101827 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,121,094 Number of Sequences: 3902068 Number of extensions: 5121094 Number of successful extensions: 104278 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104010 Number of HSP's gapped (non-prelim): 257 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)