ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14d05 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 315 bits (806), Expect = 9e-86 Identities = 139/204 (68%), Positives = 169/204 (82%) Frame = +3 Query: 6 ARGPLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQ 185 A P+INTCNGFYCD F+P+ ++PK+WTE W+GWF FGGAVP RP ED+AFAVARF Q Sbjct: 223 APDPVINTCNGFYCDYFSPNKDNKPKMWTEAWTGWFTGFGGAVPQRPAEDMAFAVARFIQ 282 Query: 186 RGGTLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMC 365 +GG+ NYYMYHGGTNFGR++GGPFISTSYDYDAPIDEYGL+RQPKWGHLRD+HKAIK+C Sbjct: 283 KGGSFINYYMYHGGTNFGRTAGGPFISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLC 342 Query: 366 EPALIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSI 545 EPAL++ +P+ SLGQN E++VY+S S CAAFLAN + + TVTFNG Y LP WSVSI Sbjct: 343 EPALVSGEPTITSLGQNQESYVYRSKSSCAAFLANFNSRYYATVTFNGMHYNLPPWSVSI 402 Query: 546 LPDCKNVVLNTAQINSQVASTQMR 617 LPDCK V NTA++ +Q + +M+ Sbjct: 403 LPDCKTTVFNTARVGAQTTTMKMQ 426
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 294 bits (753), Expect = 1e-79 Identities = 131/201 (65%), Positives = 158/201 (78%), Gaps = 1/201 (0%) Frame = +3 Query: 15 PLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGG 194 P+INTCNGFYCD FTP+ ++PK+WTE W+ WF FGG VPYRP ED+AFAVARF Q GG Sbjct: 223 PIINTCNGFYCDYFTPNKANKPKMWTEAWTAWFTEFGGPVPYRPAEDMAFAVARFIQTGG 282 Query: 195 TLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPA 374 + NYYMYHGGTNFGR+SGGPFI+TSYDYDAP+DE+G +RQPKWGHL+D+H+AIK+CEPA Sbjct: 283 SFINYYMYHGGTNFGRTSGGPFIATSYDYDAPLDEFGSLRQPKWGHLKDLHRAIKLCEPA 342 Query: 375 LIATDPSYMSLGQNAEAHVYKSGS-LCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILP 551 L++ DP+ SLG EA V+KS S CAAFLAN + S V F Y LP WS+SILP Sbjct: 343 LVSVDPTVTSLGNYQEARVFKSESGACAAFLANYNQHSFAKVAFGNMHYNLPPWSISILP 402 Query: 552 DCKNVVLNTAQINSQVASTQM 614 DCKN V NTA++ +Q A +M Sbjct: 403 DCKNTVYNTARVGAQSAQMKM 423
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 293 bits (751), Expect = 2e-79 Identities = 131/203 (64%), Positives = 158/203 (77%) Frame = +3 Query: 6 ARGPLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQ 185 A P+I+TCNGFYC+ F P+ +PK+WTE W+GW+ FGGAVP RP ED+AF+VARF Q Sbjct: 222 APDPVIDTCNGFYCENFKPNKDYKPKMWTEVWTGWYTEFGGAVPTRPAEDVAFSVARFIQ 281 Query: 186 RGGTLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMC 365 GG+ NYYMYHGGTNFGR++GGPF++TSYDYDAP+DEYGL R+PKWGHLRD+HKAIK C Sbjct: 282 SGGSFLNYYMYHGGTNFGRTAGGPFMATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKSC 341 Query: 366 EPALIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSI 545 E AL++ DPS LG N EAHV+KS S CAAFLAN D + V+F G Y LP WS+SI Sbjct: 342 ESALVSVDPSVTKLGSNQEAHVFKSESDCAAFLANYDAKYSVKVSFGGGQYDLPPWSISI 401 Query: 546 LPDCKNVVLNTAQINSQVASTQM 614 LPDCK V NTA++ SQ + QM Sbjct: 402 LPDCKTEVYNTAKVGSQSSQVQM 424
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 266 bits (680), Expect = 4e-71 Identities = 119/192 (61%), Positives = 151/192 (78%), Gaps = 1/192 (0%) Frame = +3 Query: 18 LINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGT 197 +I+TCNGFYC+ F P S+PK+WTENW+GW+ +G VPYRP ED+AF+VARF Q GG+ Sbjct: 232 VIDTCNGFYCEGFVPKDKSKPKMWTENWTGWYTEYGKPVPYRPAEDVAFSVARFIQNGGS 291 Query: 198 LQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPAL 377 NYYM+HGGTNF ++ G F+STSYDYDAP+DEYGL R+PK+ HL+++HKAIKMCEPAL Sbjct: 292 FMNYYMFHGGTNF-ETTAGRFVSTSYDYDAPLDEYGLPREPKYTHLKNLHKAIKMCEPAL 350 Query: 378 IATDPSYMSLGQNAEAHVYKSGS-LCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPD 554 +++D +LG N EAHVY S S CAAFLAN D + VTF+G ++LPAWS+SILPD Sbjct: 351 VSSDAKVTNLGSNQEAHVYSSNSGSCAAFLANYDPKWSVKVTFSGMEFELPAWSISILPD 410 Query: 555 CKNVVLNTAQIN 590 CK V NTA++N Sbjct: 411 CKKEVYNTARVN 422
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 261 bits (667), Expect = 1e-69 Identities = 113/196 (57%), Positives = 144/196 (73%) Frame = +3 Query: 15 PLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGG 194 P+I TCNGFYCDQ+ PS PS PK+WTENW+GWF ++GG PYR EDLAF+VARF+Q GG Sbjct: 226 PMIETCNGFYCDQYKPSNPSSPKMWTENWTGWFKNWGGKHPYRTAEDLAFSVARFFQTGG 285 Query: 195 TLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPA 374 T QNYYMYHGGTNFGR +GGP+I+TSYDYDAP+DEYG + QPKWGHL+ +H +K E Sbjct: 286 TFQNYYMYHGGTNFGRVAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQLHTLLKSMEKP 345 Query: 375 LIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPD 554 L + S + LG + A VY + + F+ N++ +D V F GK Y +PAWSVS+LPD Sbjct: 346 LTYGNISTIDLGNSVTATVYSTNEKSSCFIGNVNATADALVNFKGKDYNVPAWSVSVLPD 405 Query: 555 CKNVVLNTAQINSQVA 602 C NTA++N+Q + Sbjct: 406 CDKEAYNTARVNTQTS 421
>BGAL_XANMN (P48982) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 598 Score = 53.9 bits (128), Expect = 4e-07 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Frame = +3 Query: 48 DQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVA-RFYQRGGTLQNYYMYHG 224 D+ P +P++ E W+GWF +G P+ T+ A + R G N YM+ G Sbjct: 245 DKLIKFRPDQPRMVGEYWAGWFDHWGK--PHAATDARQQAEEFEWILRQGHSANLYMFIG 302 Query: 225 GTNFGRSSGGPF----------ISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEP 371 GT+FG +G F +TSYDYDA +DE G PK+ +RD + +P Sbjct: 303 GTSFGFMNGANFQNNPSDHYAPQTTSYDYDAILDEAG-HPTPKFALMRDAIARVTGVQP 360
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +3 Query: 69 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 248 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 260 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASV-NLYMFIGGTNFAYWN 318 Query: 249 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 398 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 319 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKF 372
>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor| (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP) Length = 546 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +3 Query: 69 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 248 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 129 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASV-NLYMFIGGTNFAYWN 187 Query: 249 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 398 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 188 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKF 241
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +3 Query: 69 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 248 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 260 PKGPLINSEFYTGWLDHWGQPHSTIKTEVVASSLYDILARGASV-NLYMFIGGTNFAYWN 318 Query: 249 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 398 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 319 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNVIQKFEKVPEGPIPPSTPKF 372
>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 647 Score = 50.1 bits (118), Expect = 5e-06 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Frame = +3 Query: 69 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 248 P P + +E ++GW +G T+ LA ++ RG + N YM+ GGTNF + Sbjct: 261 PKGPLINSEFYTGWLDHWGKPHSTVKTKTLATSLYNLLARGANV-NLYMFIGGTNFAYWN 319 Query: 249 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIK 359 G P+ TSYDYDAP+ E G + + K+ LR+V + K Sbjct: 320 GANTPYEPQPTSYDYDAPLSEAGDLTK-KYFALREVIQMFK 359
>BGAL_CANFA (Q9TRY9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 668 Score = 47.8 bits (112), Expect = 3e-05 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 4/140 (2%) Frame = +3 Query: 12 GPLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRG 191 GP N F + S P P + +E ++GW +G TE +A ++ G Sbjct: 244 GPGANITAAFQIQR--KSEPKGPLVNSEFYTGWLDHWGQPHSTVRTEVVASSLHDILAHG 301 Query: 192 GTLQNYYMYHGGTNFGRSSGG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIK 359 + N YM+ GGTNF +G P+ + TSYDYDAP+ E G + + K+ LR+V + + Sbjct: 302 ANV-NLYMFIGGTNFAYWNGANMPYQAQPTSYDYDAPLSEAGDLTE-KYFALREVIRKFE 359 Query: 360 MCEPALIATDPSYMSLGQNA 419 I + G+ A Sbjct: 360 KVPEGFIPPSTPKFAYGKVA 379
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 47.0 bits (110), Expect = 4e-05 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 4/140 (2%) Frame = +3 Query: 12 GPLINTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRG 191 GP N F + S P P + +E ++GW +G TE +A ++ G Sbjct: 244 GPDANITAAFQIQR--KSEPRGPLVNSEFYTGWLDHWGQPHSRVRTEVVASSLHDVLAHG 301 Query: 192 GTLQNYYMYHGGTNFGRSSGG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIK 359 + N YM+ GGTNF +G P+ TSYDYDAP+ E G + K+ LRDV + + Sbjct: 302 ANV-NLYMFIGGTNFAYWNGANIPYQPQPTSYDYDAPLSEAGDLTD-KYFALRDVIRKFE 359 Query: 360 MCEPALIATDPSYMSLGQNA 419 I + G+ A Sbjct: 360 KVPEGFIPPSTPKFAYGKVA 379
>SYFB_NOVAD (Q2GAI7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 796 Score = 38.1 bits (87), Expect = 0.021 Identities = 23/79 (29%), Positives = 33/79 (41%) Frame = +3 Query: 318 PKWGHLRDVHKAIKMCEPALIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTV 497 PKW L+D K+ + + +Y+ LG AH Y L A +A + + + Sbjct: 230 PKW--LQDYLKSAGQRPISALVDITNYVMLGYGRPAHAYDVAKLSGAVVARKAREGETCL 287 Query: 498 TFNGKAYKLPAWSVSILPD 554 NGK Y L W I D Sbjct: 288 ALNGKEYGLQPWMTVIADD 306
>BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| (Tilactase) (Lactase-N) Length = 1006 Score = 35.8 bits (81), Expect = 0.10 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +3 Query: 198 LQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPAL 377 + N YM GGTN+G + G P TSYDY + + E + + K+ L+ + K+ P Sbjct: 338 IMNLYMIFGGTNWG-NLGYPNGYTSYDYGSAVTESRNITREKYSELKLLGNFAKV-SPGY 395 Query: 378 IATDPSYMSLGQNAE 422 + P ++ A+ Sbjct: 396 LTASPGNLTTSGYAD 410
>AMOL1_HUMAN (Q8IY63) Angiomotin-like protein 1| Length = 956 Score = 30.8 bits (68), Expect = 3.3 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +3 Query: 144 PTEDLAFAVARFY--------QRGGTLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDE 299 PT + A A ++F+ Q+G YYM G + R+ G P ++ + A DE Sbjct: 189 PTYEEAKAQSQFFRGQQQQQQQQGAVGHGYYMAGGTSQKSRTEGRPTVNRANSGQAHKDE 248 Query: 300 YGLVRQPKWGHLRDVHKAI 356 +++ K GH+R + + I Sbjct: 249 --ALKELKQGHVRSLSERI 265
>TOLB_RICTY (Q68X69) Protein tolB precursor| Length = 443 Score = 30.4 bits (67), Expect = 4.3 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Frame = +3 Query: 177 FYQRGGTLQNYYMYHGGTNFGRSSG-GPFISTSY-DYDAPIDEYGLVRQPKWG--HLRDV 344 FY T +Y G+ S G F+ S+ +P + ++ K G H+ ++ Sbjct: 213 FYVSYATKSRALVYEKDLKTGKESVVGDFVGISFAPRFSPDGKKAVMSIAKNGSTHIYEI 272 Query: 345 HKAIKMCEPAL----IATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGK 512 A K I T PSY G+ + K+G + ++ N D + ++F G Sbjct: 273 DLATKQLNKLTDGFGINTSPSYSPDGKKIVYNSDKNG-VPQLYIMNSDGSDVRRISFGGG 331 Query: 513 AYKLPAWS 536 +Y P+WS Sbjct: 332 SYASPSWS 339
>SYFB_ZYMMO (Q5NMC3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 789 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/83 (24%), Positives = 37/83 (44%) Frame = +3 Query: 318 PKWGHLRDVHKAIKMCEPALIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTV 497 P+W R +AI + + +Y+ HVY +G++ A ++K Sbjct: 231 PEWMARR--LRAIGFRPTSALVDITNYIMFDLGRPLHVYDAGAIKGKLTARKAQNNEKIE 288 Query: 498 TFNGKAYKLPAWSVSILPDCKNV 566 NGK+Y L S++++ D + V Sbjct: 289 ALNGKSYDLDP-SITVIADDQGV 310
>SYFB_WOLPM (Q73HW5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 779 Score = 29.3 bits (64), Expect = 9.7 Identities = 26/108 (24%), Positives = 44/108 (40%) Frame = +3 Query: 243 SSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSYMSLGQNAE 422 + G FIS Y + E PKW L+D ++I M + I +Y+ + + Sbjct: 204 TDGESFISGIYIANVKNQE-----SPKW--LKDRLESIGMRSISAIVDITNYIMISFSRP 256 Query: 423 AHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCKNV 566 H Y + + + +K NGK Y L +S++ KN+ Sbjct: 257 MHAYDAKKIEGELTVRKANDGEKFAGLNGKEYLLNK-DISVIAGDKNI 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,133,019 Number of Sequences: 219361 Number of extensions: 1597120 Number of successful extensions: 4042 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4029 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
