>SQV2_CAEEL (Q9N491) Beta-1,3-galactosyltransferase sqv-2 (EC 2.4.1.134)|
           (Squashed vulva protein 2)
          Length = 330

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 4   YININSASLQSYAHDDISVGSWMMGLNATYVDDDR 108
           ++ IN+   + Y ++D+SVG+W+ GL+  YV D R
Sbjct: 226 FLAINAQLFRHYRNEDVSVGAWIGGLDVKYVHDPR 260

>MBRL_HUMAN (Q4ZIN3) Membralin|
          Length = 620

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 298 FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 158
           +L I HS IYF H + LPAI   +   +Q+ L    P   G    LP
Sbjct: 435 WLFIQHSMIYFFHHYELPAI--LQQVRIQEMLLQAPPLGPGTPTALP 479

>MBRL_MOUSE (Q8CIV2) Membralin|
          Length = 574

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 298 FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 158
           +L I HS IYF H + LPAI   +   +Q+ L    P   G    LP
Sbjct: 426 WLFIQHSMIYFFHHYELPAI--LQQIRIQEMLLQTPPLGPGTPTALP 470

>ADA28_HUMAN (Q9UKQ2) ADAM 28 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 28) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein-L) (MDC-L)
           (eMDC II) (ADAM23)
          Length = 775

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -2

Query: 200 HQDATIRRGAAGPSAHPMEHTFSCTELRQHRRSSST*VALSPII--HEPTDMSSCA*LCS 27
           H D  +R   AG  AH M H F         +  ST   +   +  + PTD SSC+ L  
Sbjct: 326 HSDNLLR--VAGTMAHEMGHNFGMFHDDYSCKCPSTICVMDKALSFYIPTDFSSCSRLSY 383

Query: 26  DALF 15
           D  F
Sbjct: 384 DKFF 387

>ADA28_MACFA (Q9XSL6) ADAM 28 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 28) (eMDC II)
          Length = 776

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -2

Query: 200 HQDATIRRGAAGPSAHPMEHTFSCTELRQHRRSSST*VALSPII--HEPTDMSSCA*LCS 27
           H D  +R   AG  AH M H F         +  ST   +   +  + PTD SSC+ +  
Sbjct: 327 HSDNLLR--VAGTMAHEMGHNFGMFHDNYSCKCPSTICVMDKALSFYIPTDFSSCSRVSY 384

Query: 26  DALF 15
           D  F
Sbjct: 385 DKFF 388


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,882,069
Number of Sequences: 219361
Number of extensions: 904861
Number of successful extensions: 2089
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2089
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)