ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13n18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184896.1| Oryza sativa (japonica cultivar-group), mRNA 143 9e-31
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 9e-31
3gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 143 9e-31
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
5dbj|AK103310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
6dbj|AK059632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
8dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
9dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
10ref|XM_468453.1| Oryza sativa (japonica cultivar-group), mRNA 70 1e-08
11dbj|AK099610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
12dbj|AK065330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
13gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 ma... 44 0.59
14gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 44 0.59
15gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosom... 44 0.59
16gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete se... 44 0.59
17gb|AC135798.31| Medicago truncatula clone mth2-31c16, complete s... 44 0.59
18dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
19gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 42 2.3
20gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, com... 42 2.3
21emb|CR618508.1| full-length cDNA clone CS0DF028YE03 of Fetal bra... 42 2.3
22gb|AC148829.3| Pan troglodytes BAC clone CH251-483L24 from chrom... 42 2.3
23gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map... 42 2.3
24gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, comp... 42 2.3
25gb|AC058823.4| Homo sapiens BAC clone RP11-810D13 from 4, comple... 42 2.3
26ref|XM_694611.1| PREDICTED: Danio rerio similar to SNF2 histone ... 42 2.3
27gb|AC159894.2| Mus musculus BAC clone RP23-296M10 from chromosom... 42 2.3
28gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369... 42 2.3
29gb|AC018648.5|AC018648 Homo sapiens chromosome 7 clone RP11-265E... 42 2.3
30gb|AY155564.1| Ochlerotatus triseriatus late trypsin gene, compl... 42 2.3
31gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, com... 40 9.2
32gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosom... 40 9.2
33gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosom... 40 9.2
34gb|AC103612.5| Mus musculus chromosome 5, clone RP24-455E13, com... 40 9.2
35gb|AC004636.1| Homo sapiens chromosome 5, P1 clone 1268h6 (LBNL ... 40 9.2
36gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, comp... 40 9.2
37ref|XM_419162.1| PREDICTED: Gallus gallus similar to Niemann-Pic... 40 9.2
38gb|AC147035.3| Pan troglodytes BAC clone RP43-104N19 from 7, com... 40 9.2
39gb|DQ002483.1|DQ002483S1 Helicobacter pylori isolate HP45755 Vir... 40 9.2
40gb|AY330641.1|AY330640S2 Helicobacter pylori strain Du52:2 cag p... 40 9.2
41gb|AY330639.1|AY330638S2 Helicobacter pylori strain Ca73 cag pat... 40 9.2
42gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, com... 40 9.2
43emb|CR450690.7| Zebrafish DNA sequence from clone CH211-78C14 in... 40 9.2
44gb|AC132238.3| Mus musculus BAC clone RP24-532D9 from chromosome... 40 9.2
45emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230... 40 9.2
46gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete... 40 9.2
47gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, compl... 40 9.2
48emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in... 40 9.2
49emb|AL591380.21| Human DNA sequence from clone RP11-223J24 on ch... 40 9.2
50emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on ch... 40 9.2
51emb|AL158207.15| Human DNA sequence from clone RP11-409K20 on ch... 40 9.2
52emb|AL160162.11| Human DNA sequence from clone RP1-200K18 on chr... 40 9.2
53emb|AL161449.7| Human DNA sequence from clone RP11-382H24 on chr... 40 9.2
54gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, co... 40 9.2
55emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 i... 40 9.2
56gb|AC112233.3| Homo sapiens BAC clone RP11-211G17 from 4, comple... 40 9.2
57dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 9.2
58gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, comple... 40 9.2
59gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosom... 40 9.2
60gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map ... 40 9.2
61gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, compl... 40 9.2
62gb|BC068119.1| Mus musculus DCP1 decapping enzyme homolog b (S. ... 40 9.2
63gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8... 40 9.2
64gb|AC113151.5| Homo sapiens BAC clone RP11-58N10 from 4, complet... 40 9.2
65gb|AC009502.4| Homo sapiens BAC clone RP11-512O7 from 2, complet... 40 9.2
66gb|AC157956.2| Pan troglodytes BAC clone CH251-379N13 from chrom... 40 9.2
67gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromo... 40 9.2
68gb|AC158395.2| Mus musculus BAC clone RP23-282I1 from chromosome... 40 9.2
69gb|AF300828.1|AF300828 Helicobacter pylori Cag7 (cag7) gene, par... 40 9.2
70gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7,... 40 9.2
71gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, compl... 40 9.2
72dbj|AB120426.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
73dbj|AB120425.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
74dbj|AB120424.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
75dbj|AB120423.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
76dbj|AB120422.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
77dbj|AB120421.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
78dbj|AB120419.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
79dbj|AB120418.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
80dbj|AB120417.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
81dbj|AB120416.1| Helicobacter pylori genes for cag pathogenicity ... 40 9.2
82emb|AL671926.11| Mouse DNA sequence from clone RP23-356J7 on chr... 40 9.2
83emb|AJ012220.1|GGA012220 Gallus gallus ip3ka gene, exons A to D ... 40 9.2
84emb|BX571709.23| Zebrafish DNA sequence from clone DKEY-251M8 in... 40 9.2
85gb|AC116137.19| Mus musculus chromosome 19, clone RP23-122L1, co... 40 9.2
86gb|AC116863.6| Mus musculus chromosome 19, clone RP24-408G9, com... 40 9.2
87emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 i... 40 9.2
88emb|CR933737.7| Zebrafish DNA sequence from clone DKEY-35B9 in l... 40 9.2
89gb|AE000511.1| Helicobacter pylori 26695, complete genome 40 9.2
90gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, comple... 40 9.2
91gb|AC145946.3| Gallus gallus BAC clone CH261-23O21 from chromoso... 40 9.2
92gb|AC169816.2| Rhesus Macaque CHR2 BAC CH250-117I15 (Children's ... 40 9.2
93emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chr... 40 9.2 
>ref|NM_184896.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2442

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                        
Query: 131  gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
            ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 2041 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 1982

                                                                        
Query: 191  gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
            |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 1981 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 1922

                                                                    
Query: 251  tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
            | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 1921 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 1866
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                            
Query: 131      gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
                ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 31766402 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 31766343

                                                                            
Query: 191      gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
                |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 31766342 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 31766283

                                                                        
Query: 251      tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
                | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 31766282 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 31766227
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>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
             sequence
          Length = 134496

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                         
Query: 131   gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
             ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 91628 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 91569

                                                                         
Query: 191   gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
             |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 91568 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 91509

                                                                     
Query: 251   tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
             | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 91508 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 91453
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                            
Query: 131      gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
                ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 31856918 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 31856859

                                                                            
Query: 191      gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
                |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 31856858 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 31856799

                                                                        
Query: 251      tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
                | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 31856798 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 31856743
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>dbj|AK103310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G15, full
            insert sequence
          Length = 2834

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                        
Query: 131  gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
            ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 2055 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 1996

                                                                        
Query: 191  gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
            |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 1995 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 1936

                                                                    
Query: 251  tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
            | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 1935 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 1880
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>dbj|AK059632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A05, full
           insert sequence
          Length = 1299

 Score =  143 bits (72), Expect = 9e-31
 Identities = 150/176 (85%)
 Strand = Plus / Minus

                                                                       
Query: 131 gggtagaaaagtatggcgttgaccctgcacttgcccattgttttccatcaccagcataag 190
           ||||||||||||||||| |||||| | || ||| |   ||||||||||||||| || |||
Sbjct: 761 gggtagaaaagtatggcattgaccttccatttgtcttctgttttccatcaccatcaaaag 702

                                                                       
Query: 191 gcgagcagccagacatcatgtagtaagagctgaggtgttcctgcctacagatggtaggtg 250
           |||||||  ||||||||||||||||||| |||||||| ||||||||||| |  ||||| |
Sbjct: 701 gcgagcactcagacatcatgtagtaagaactgaggtgctcctgcctacatactgtaggcg 642

                                                                   
Query: 251 tttcgtgttgatttttgagaacacacatggtgctgaaaccttgttggaaaaagcaa 306
           | || ||||||||| |||||  | |||||||||||||||| ||||||| |||||||
Sbjct: 641 tctcatgttgatttctgagataagacatggtgctgaaaccatgttggacaaagcaa 586
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 3        ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggtaa 51
                ||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 35306998 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggtaa 35307046



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 483      attatatatgtttcaaggataa 504
                ||||||||||||||||||||||
Sbjct: 12576104 attatatatgtttcaaggataa 12576083
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 3     ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggtaa 51
             ||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 57332 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggtaa 57380
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0474F11
          Length = 139544

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                               
Query: 3      ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggtaa 51
              ||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 119048 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggtaa 119096
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>ref|XM_468453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2588

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                           
Query: 3    ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggt 49
            ||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 1719 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggt 1765
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>dbj|AK099610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049H16, full
           insert sequence
          Length = 1745

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 3   ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggt 49
           ||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 862 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggt 908
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>dbj|AK065330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A03, full
            insert sequence
          Length = 2588

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                           
Query: 3    ctcatcgtcctcgacttcaaggacgtccgcccctgcctggagaaggt 49
            ||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 1719 ctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggt 1765
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>gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 map 6, complete sequence
          Length = 203032

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 607    atatattttcataacatatatg 628
              ||||||||||||||||||||||
Sbjct: 174193 atatattttcataacatatatg 174172
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
              sequence
          Length = 252420

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 611    attttcataacatatatgattcaaaa 636
              ||||||||||||||||||||| ||||
Sbjct: 109509 attttcataacatatatgattgaaaa 109484
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>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence
          Length = 195587

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 607   atatattttcataacatatatg 628
             ||||||||||||||||||||||
Sbjct: 15832 atatattttcataacatatatg 15811
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>gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete sequence
          Length = 130660

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 316   gaagaagtcttttgttttcttt 337
             ||||||||||||||||||||||
Sbjct: 82298 gaagaagtcttttgttttcttt 82277
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>gb|AC135798.31| Medicago truncatula clone mth2-31c16, complete sequence
          Length = 123159

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 316    gaagaagtcttttgttttcttt 337
              ||||||||||||||||||||||
Sbjct: 102698 gaagaagtcttttgttttcttt 102719
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>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0572D06
          Length = 148920

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 483   attatatatgtttcaaggataa 504
             ||||||||||||||||||||||
Sbjct: 80637 attatatatgtttcaaggataa 80616
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
             sequence
          Length = 253151

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 648   atacatatcaaatataatgtt 668
             |||||||||||||||||||||
Sbjct: 54984 atacatatcaaatataatgtt 55004



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 648   atacatatcaaatataatgtt 668
             |||||||||||||||||||||
Sbjct: 54732 atacatatcaaatataatgtt 54752
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>gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, complete sequence
          Length = 192990

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 292    tgttggaaaaagcaactagatggag 316
              |||||||||||||||||| ||||||
Sbjct: 160210 tgttggaaaaagcaactaaatggag 160234
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>emb|CR618508.1| full-length cDNA clone CS0DF028YE03 of Fetal brain of Homo sapiens
            (human)
          Length = 1834

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 373  gtacttatttttatttttacc 393
            |||||||||||||||||||||
Sbjct: 1020 gtacttatttttatttttacc 1000
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>gb|AC148829.3| Pan troglodytes BAC clone CH251-483L24 from chromosome 7, complete
              sequence
          Length = 153598

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 373    gtacttatttttatttttacc 393
              |||||||||||||||||||||
Sbjct: 120616 gtacttatttttatttttacc 120636
to top
>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete
             sequence
          Length = 103874

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   tacttatttttatttttacca 394
             |||||||||||||||||||||
Sbjct: 47556 tacttatttttatttttacca 47536
to top
>gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, complete sequence
          Length = 142093

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 607   atatattttcataacatatat 627
             |||||||||||||||||||||
Sbjct: 39580 atatattttcataacatatat 39600
to top
>gb|AC058823.4| Homo sapiens BAC clone RP11-810D13 from 4, complete sequence
          Length = 144277

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 609   atattttcataacatatatga 629
             |||||||||||||||||||||
Sbjct: 49204 atattttcataacatatatga 49184
to top
>ref|XM_694611.1| PREDICTED: Danio rerio similar to SNF2 histone linker PHD RING
           helicase (LOC571059), partial mRNA
          Length = 688

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 163 gcccattgttttccatcacca 183
           |||||||||||||||||||||
Sbjct: 571 gcccattgttttccatcacca 591
to top
>gb|AC159894.2| Mus musculus BAC clone RP23-296M10 from chromosome 9, complete sequence
          Length = 198120

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 292   tgttggaaaaagcaactagatggag 316
             |||||||||||||||||| ||||||
Sbjct: 14499 tgttggaaaaagcaactaaatggag 14523
to top
>gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369E15, complete sequence
          Length = 189662

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 372   tgtacttatttttatttttaccaga 396
             ||||||||||||| |||||||||||
Sbjct: 58618 tgtacttatttttttttttaccaga 58642
to top
>gb|AC018648.5|AC018648 Homo sapiens chromosome 7 clone RP11-265E18, complete sequence
          Length = 155953

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 373    gtacttatttttatttttacc 393
              |||||||||||||||||||||
Sbjct: 122831 gtacttatttttatttttacc 122851
to top
>gb|AY155564.1| Ochlerotatus triseriatus late trypsin gene, complete cds
          Length = 3666

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 608 tatattttcataacatatatg 628
           |||||||||||||||||||||
Sbjct: 777 tatattttcataacatatatg 797
to top
>gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, complete sequence
          Length = 145479

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   tagatggagaagaagtcttt 327
             ||||||||||||||||||||
Sbjct: 15261 tagatggagaagaagtcttt 15242
to top
>gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosome 6, complete sequence
          Length = 190146

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   tgtacttatttttattttta 391
             ||||||||||||||||||||
Sbjct: 68512 tgtacttatttttattttta 68493
to top
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete
             sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 622   atatatgattcaaaaactaatcta 645
             |||||||| |||||||||||||||
Sbjct: 24031 atatatgaatcaaaaactaatcta 24008
to top
>gb|AC103612.5| Mus musculus chromosome 5, clone RP24-455E13, complete sequence
          Length = 152420

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tagatggagaagaagtcttt 327
              ||||||||||||||||||||
Sbjct: 120278 tagatggagaagaagtcttt 120259
to top
>gb|AC004636.1| Homo sapiens chromosome 5, P1 clone 1268h6 (LBNL H50), complete
             sequence
          Length = 78293

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ttatttttatttttaccaga 396
             ||||||||||||||||||||
Sbjct: 23283 ttatttttatttttaccaga 23264
to top
>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence
          Length = 153627

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   ggtgtttcgtgttgattttt 266
             ||||||||||||||||||||
Sbjct: 19609 ggtgtttcgtgttgattttt 19628
to top
>ref|XM_419162.1| PREDICTED: Gallus gallus similar to Niemann-Pick C1 (LOC421076),
           mRNA
          Length = 3448

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 cttttgttttctttcgaaac 343
           ||||||||||||||||||||
Sbjct: 473 cttttgttttctttcgaaac 454
to top
>gb|AC147035.3| Pan troglodytes BAC clone RP43-104N19 from 7, complete sequence
          Length = 177446

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    ggtgtttcgtgttgattttt 266
              ||||||||||||||||||||
Sbjct: 162815 ggtgtttcgtgttgattttt 162834
to top
>gb|DQ002483.1|DQ002483S1 Helicobacter pylori isolate HP45755 VirB10 (virB10) gene, partial
           cds
          Length = 1575

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 ttcatctaaattcttttgct 567
           ||||||||||||||||||||
Sbjct: 348 ttcatctaaattcttttgct 329
to top
>gb|AY330641.1|AY330640S2 Helicobacter pylori strain Du52:2 cag pathogenicity island section 2,
            partial sequence
          Length = 22960

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  ttcatctaaattcttttgct 567
            ||||||||||||||||||||
Sbjct: 1321 ttcatctaaattcttttgct 1340
to top
>gb|AY330639.1|AY330638S2 Helicobacter pylori strain Ca73 cag pathogenicity island section 2,
            partial sequence
          Length = 26663

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  ttcatctaaattcttttgct 567
            ||||||||||||||||||||
Sbjct: 1705 ttcatctaaattcttttgct 1724



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  ttcatctaaattcttttgct 567
            ||||||||||||||||||||
Sbjct: 1315 ttcatctaaattcttttgct 1334
to top
>gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, complete sequence
          Length = 229261

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   tgtacttatttttattttta 391
             ||||||||||||||||||||
Sbjct: 57346 tgtacttatttttattttta 57365
to top
>emb|CR450690.7| Zebrafish DNA sequence from clone CH211-78C14 in linkage group 11,
             complete sequence
          Length = 163328

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 606   catatattttcataacatat 625
             ||||||||||||||||||||
Sbjct: 73049 catatattttcataacatat 73030
to top
>gb|AC132238.3| Mus musculus BAC clone RP24-532D9 from chromosome 2, complete sequence
          Length = 164293

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   aggtgatagcatcattatat 489
             ||||||||||||||||||||
Sbjct: 68002 aggtgatagcatcattatat 67983
to top
>emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230-139I21, complete sequence
          Length = 212885

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 620    acatatatgattcaaaaact 639
              ||||||||||||||||||||
Sbjct: 136266 acatatatgattcaaaaact 136285
to top
>gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete sequence
          Length = 70416

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ctgtacttatttttattttt 390
             ||||||||||||||||||||
Sbjct: 46401 ctgtacttatttttattttt 46382
to top
>gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, complete sequence
          Length = 154836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 595    cttcatttggacatatattttcat 618
              ||||||||| ||||||||||||||
Sbjct: 131266 cttcatttgaacatatattttcat 131289
to top
>emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in linkage group 10,
             complete sequence
          Length = 83568

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 371   ctgtacttatttttatttttacca 394
             ||||| ||||||||||||||||||
Sbjct: 20584 ctgtagttatttttatttttacca 20607
to top
>emb|AL591380.21| Human DNA sequence from clone RP11-223J24 on chromosome 1 Contains the
             5' end of the ENAH gene for enabled homolog (Drosophila)
             and two CpG islands, complete sequence
          Length = 70202

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   tttggacatatattttcata 619
             ||||||||||||||||||||
Sbjct: 70137 tttggacatatattttcata 70156
to top
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a
             novel pseudogene, a farnesyl diphosphate synthase
             (farnesyl pyrophosphate synthetase,
             dimethylallyltranstransferase, geranyltranstransferase)
             (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end
             of a solute carrier family 4 (anion exchanger) member 1
             adaptor protein (SLC4A1AP) pseudogene, complete sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 648   atacatatcaaatataatgt 667
             ||||||||||||||||||||
Sbjct: 86508 atacatatcaaatataatgt 86527
to top
>emb|AL158207.15| Human DNA sequence from clone RP11-409K20 on chromosome 9 Contains the
             TOR1B gene for torsin family 1 member B (torsin B) (DQ1),
             the DYT1 gene for dystonia 1, torsion (autosomal dominant;
             torsin A) (DQ2, TOR1A), the gene for hepatocellular
             carcinoma-associated antigen 59 (HSPC220, LOC51759), the
             USP20 gene for ubiquitin specific protease 20 (KIAA1003),
             the 3' end of the FNBP1 gene for formin-binding protein 17
             (FBP17), two novel genes, a 60S ribosomal protein L34
             (RPL34) pseudogene and four CpG islands, complete sequence
          Length = 169963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   acttatttttatttttacca 394
             ||||||||||||||||||||
Sbjct: 71825 acttatttttatttttacca 71844
to top
>emb|AL160162.11| Human DNA sequence from clone RP1-200K18 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 82329

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 474   gatagcatcattatatatgtttca 497
             ||||||||||||||||| ||||||
Sbjct: 24778 gatagcatcattatataagtttca 24801
to top
>emb|AL161449.7| Human DNA sequence from clone RP11-382H24 on chromosome 9p22.1-23
             Contains a peroxiredoxin 1 (PRDX1) pseudogene, a Sjogren
             syndrome antigen B (autoantigen La) (SSB) pseudogene, the
             3' end of the MPDZ gene for multiple PDZ domain protein
             and a CpG island, complete sequence
          Length = 169660

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 624   atatgattcaaaaactaatc 643
             ||||||||||||||||||||
Sbjct: 53209 atatgattcaaaaactaatc 53190
to top
>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence
          Length = 211081

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    acaagctgtacttattttta 385
              ||||||||||||||||||||
Sbjct: 100806 acaagctgtacttattttta 100825
to top
>emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 in linkage group 11,
            complete sequence
          Length = 131868

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 606  catatattttcataacatat 625
            ||||||||||||||||||||
Sbjct: 1151 catatattttcataacatat 1170
to top
>gb|AC112233.3| Homo sapiens BAC clone RP11-211G17 from 4, complete sequence
          Length = 51878

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   tatgtttcaaggataaacta 508
             ||||||||||||||||||||
Sbjct: 10221 tatgtttcaaggataaacta 10240
to top
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       tcatcgtcctcgacttcaag 23
               ||||||||||||||||||||
Sbjct: 1761398 tcatcgtcctcgacttcaag 1761379
to top
>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence
          Length = 143498

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  ctgtacttatttttattttt 390
            ||||||||||||||||||||
Sbjct: 8692 ctgtacttatttttattttt 8711
to top
>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    gcccctgcctggagaaggta 50
             ||||||||||||||||||||
Sbjct: 44196 gcccctgcctggagaaggta 44215
to top
>gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map 15q22, complete
             sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   ctgtacttatttttattttt 390
             ||||||||||||||||||||
Sbjct: 68699 ctgtacttatttttattttt 68718
to top
>gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, complete sequence
          Length = 142047

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   tgtacttatttttattttta 391
             ||||||||||||||||||||
Sbjct: 90241 tgtacttatttttattttta 90222
to top
>gb|BC068119.1| Mus musculus DCP1 decapping enzyme homolog b (S. cerevisiae), mRNA
            (cDNA clone IMAGE:5706525), with apparent retained intron
          Length = 4227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 372  tgtacttatttttattttta 391
            ||||||||||||||||||||
Sbjct: 2399 tgtacttatttttattttta 2418
to top
>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence
          Length = 182988

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   ggaaaaagcaactagatggagaag 319
             |||| |||||||||||||||||||
Sbjct: 66381 ggaagaagcaactagatggagaag 66404
to top
>gb|AC113151.5| Homo sapiens BAC clone RP11-58N10 from 4, complete sequence
          Length = 79349

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   aggatacatatcaaatataa 664
             ||||||||||||||||||||
Sbjct: 37183 aggatacatatcaaatataa 37202
to top
>gb|AC009502.4| Homo sapiens BAC clone RP11-512O7 from 2, complete sequence
          Length = 194958

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   acatatattttcataacata 624
             ||||||||||||||||||||
Sbjct: 57475 acatatattttcataacata 57494
to top
>gb|AC157956.2| Pan troglodytes BAC clone CH251-379N13 from chromosome unknown,
             complete sequence
          Length = 164394

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   acatatattttcataacata 624
             ||||||||||||||||||||
Sbjct: 96370 acatatattttcataacata 96351
to top
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete
              sequence
          Length = 219580

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 595    cttcatttggacatatattttcat 618
              ||||||||| ||||||||||||||
Sbjct: 111810 cttcatttgaacatatattttcat 111833
to top
>gb|AC158395.2| Mus musculus BAC clone RP23-282I1 from chromosome 14, complete
            sequence
          Length = 220498

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 622  atatatgattcaaaaactaatcta 645
            |||||||| |||||||||||||||
Sbjct: 4342 atatatgaatcaaaaactaatcta 4365
to top
>gb|AF300828.1|AF300828 Helicobacter pylori Cag7 (cag7) gene, partial cds
          Length = 1439

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  ttcatctaaattcttttgct 567
            ||||||||||||||||||||
Sbjct: 1101 ttcatctaaattcttttgct 1082



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 ttcatctaaattcttttgct 567
           ||||||||||||||||||||
Sbjct: 717 ttcatctaaattcttttgct 698
to top
>gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7, complete sequence
          Length = 118334

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  ctgtacttatttttattttt 390
            ||||||||||||||||||||
Sbjct: 6365 ctgtacttatttttattttt 6384
to top
>gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, complete sequence
          Length = 149549

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 600  tttggacatatattttcata 619
            ||||||||||||||||||||
Sbjct: 1935 tttggacatatattttcata 1954
to top
>dbj|AB120426.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:OK129
          Length = 37656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12674 ttcatctaaattcttttgct 12693



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12284 ttcatctaaattcttttgct 12303
to top
>dbj|AB120425.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:OK112
          Length = 37037

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12785 ttcatctaaattcttttgct 12804
to top
>dbj|AB120424.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:OK109
          Length = 37215

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12285 ttcatctaaattcttttgct 12304
to top
>dbj|AB120423.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:OK107
          Length = 38561

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12371 ttcatctaaattcttttgct 12390
to top
>dbj|AB120422.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:OK101
          Length = 37021

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12317 ttcatctaaattcttttgct 12336



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 11930 ttcatctaaattcttttgct 11949
to top
>dbj|AB120421.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:F80
          Length = 37506

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12738 ttcatctaaattcttttgct 12757



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12348 ttcatctaaattcttttgct 12367
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>dbj|AB120419.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:F32
          Length = 37837

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12891 ttcatctaaattcttttgct 12910



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12501 ttcatctaaattcttttgct 12520
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>dbj|AB120418.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:F28
          Length = 37220

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12239 ttcatctaaattcttttgct 12258
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>dbj|AB120417.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:F17
          Length = 37425

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12344 ttcatctaaattcttttgct 12363



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 11954 ttcatctaaattcttttgct 11973
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>dbj|AB120416.1| Helicobacter pylori genes for cag pathogenicity island protein,
             complete cds, strain:F16
          Length = 37029

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttcatctaaattcttttgct 567
             ||||||||||||||||||||
Sbjct: 12262 ttcatctaaattcttttgct 12281
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>emb|AL671926.11| Mouse DNA sequence from clone RP23-356J7 on chromosome X, complete
              sequence
          Length = 153310

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    gtacttatttttatttttac 392
              ||||||||||||||||||||
Sbjct: 148496 gtacttatttttatttttac 148477
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>emb|AJ012220.1|GGA012220 Gallus gallus ip3ka gene, exons A to D and alternative partial
             transcripts
          Length = 18499

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   gaggtgttcctgcctacaga 241
             ||||||||||||||||||||
Sbjct: 15355 gaggtgttcctgcctacaga 15374
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>emb|BX571709.23| Zebrafish DNA sequence from clone DKEY-251M8 in linkage group 11,
              complete sequence
          Length = 154382

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    catatattttcataacatat 625
              ||||||||||||||||||||
Sbjct: 153533 catatattttcataacatat 153552
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>gb|AC116137.19| Mus musculus chromosome 19, clone RP23-122L1, complete sequence
          Length = 170307

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gagaaggtaactaacccacc 61
              ||||||||||||||||||||
Sbjct: 167544 gagaaggtaactaacccacc 167563
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>gb|AC116863.6| Mus musculus chromosome 19, clone RP24-408G9, complete sequence
          Length = 171621

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     gagaaggtaactaacccacc 61
              ||||||||||||||||||||
Sbjct: 100058 gagaaggtaactaacccacc 100039
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>emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 in linkage group 10,
              complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 371    ctgtacttatttttatttttacca 394
              ||||| ||||||||||||||||||
Sbjct: 163301 ctgtagttatttttatttttacca 163324
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>emb|CR933737.7| Zebrafish DNA sequence from clone DKEY-35B9 in linkage group 11,
             complete sequence
          Length = 76356

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 606   catatattttcataacatat 625
             ||||||||||||||||||||
Sbjct: 75206 catatattttcataacatat 75187
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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    ttcatctaaattcttttgct 567
              ||||||||||||||||||||
Sbjct: 559657 ttcatctaaattcttttgct 559676



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    ttcatctaaattcttttgct 567
              ||||||||||||||||||||
Sbjct: 559267 ttcatctaaattcttttgct 559286
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>gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, complete sequence
          Length = 211847

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gcccctgcctggagaaggta 50
             ||||||||||||||||||||
Sbjct: 15849 gcccctgcctggagaaggta 15830
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>gb|AC145946.3| Gallus gallus BAC clone CH261-23O21 from chromosome unknown, complete
             sequence
          Length = 248690

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   gaggtgttcctgcctacaga 241
             ||||||||||||||||||||
Sbjct: 94436 gaggtgttcctgcctacaga 94455
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>gb|AC169816.2| Rhesus Macaque CHR2 BAC CH250-117I15 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 171344

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   acatatattttcataacata 624
             ||||||||||||||||||||
Sbjct: 85067 acatatattttcataacata 85048
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>emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chromosome 2, complete
              sequence
          Length = 211326

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    aggtgatagcatcattatat 489
              ||||||||||||||||||||
Sbjct: 203816 aggtgatagcatcattatat 203835


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,306,460
Number of Sequences: 3902068
Number of extensions: 9306460
Number of successful extensions: 307780
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 307051
Number of HSP's gapped (non-prelim): 723
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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