ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13n12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 188 bits (95), Expect = 2e-44 Identities = 190/224 (84%) Strand = Plus / Minus Query: 4 ctcttctttgggattttgatgattatgttcaatggtttagcagaagtaggtctaactatt 63 |||||||||||||| ||||||| |||||||| || || |||||||| |||||||||||| Sbjct: 9922381 ctcttctttgggatcctgatgatcatgttcaacggattggcagaagttggtctaactatt 9922322 Query: 64 gcaaagctccctgnnnnnnncaagcaacggaatcttctcttctttccagcatggacatat 123 ||||| ||||||| ||||||| || |||| ||||||| ||||||||||||||| Sbjct: 9922321 gcaaaactccctgttttcttcaagcaaagggatctcctcttctatccagcatggacatac 9922262 Query: 124 acgttgccgtcatggctcattaagacccccctctccttgctcaatgtaacaatttgggtc 183 | || || |||||| |||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 9922261 tccttaccatcatggatcattaagactccactctccttgctcaatgtaacaatatgggtc 9922202 Query: 184 ggcataacatactatggcattggatttgatcccaacgtacagag 227 ||||||||| |||| |||||||||||||||||| ||| |||| Sbjct: 9922201 ttcataacatattatgtcattggatttgatcccaatgtagagag 9922158 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Minus Query: 230 tttttagacagttcctgctgctctttttaatgaatgaagcatcatctggactcttccgct 289 |||||||||||||||||||||| || |||||||||| ||||||||||||| || |||| Sbjct: 9922072 tttttagacagttcctgctgcttttagtaatgaatgagacatcatctggactgtttcgct 9922013 Query: 290 tcattgctggtcttgcaaggcatcaggttgttgcaagcaccctcggttccttctgcatac 349 |||||||||| |||||||||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 9922012 tcattgctgggtttgcaaggcatcaggttgttgcaagcactatgggttcattctgtatac 9921953 Query: 350 taatttttatgct 362 | ||||||||||| Sbjct: 9921952 tcatttttatgct 9921940 Score = 117 bits (59), Expect = 5e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 511 gaaccacttggaagcctagttctggaatctcgaggggtttttcctgatacgaagtggtac 570 |||||||||||||| ||||||||||||||||| ||| |||||||||| | || ||||| Sbjct: 9961108 gaaccacttggaaggctagttctggaatctcgtgggttttttcctgaggccaaatggtat 9961049 Query: 571 tggattggtgctggtgccttgctcggatatgtgctgctatttaatatcctttataccgtc 630 |||||||||| |||||||||||||||||||||| | ||||| ||| |||| || ||| || Sbjct: 9961048 tggattggtgttggtgccttgctcggatatgtgattctattaaatgtcctctacaccatc 9960989 Query: 631 tgcctca 637 || |||| Sbjct: 9960988 tgtctca 9960982 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 491 agacaatccctggtttcaaggaaccacttggaagcctagttctggaatctcgaggggttt 550 ||||||| |||||||||| ||| |||||||||| |||||||| ||||| || || |||| Sbjct: 9921628 agacaatacctggtttcagggagccacttggaaaactagttcttgaatcccgtggagttt 9921569 Query: 551 ttcctgatacgaagtggtactggattggtgctggtgccttgctcggatatgtgctgctat 610 | ||||| | || ||||| |||||||||| |||||| ||||||||||| || ||||||| Sbjct: 9921568 tccctgaggccaaatggtattggattggtgttggtgcattgctcggatacgtcctgctat 9921509 Query: 611 ttaatatcctttataccgtctgcctcacattcctc 645 | |||||||| || || ||||||||||||||||| Sbjct: 9921508 tcaatatcctctacacaatctgcctcacattcctc 9921474 Score = 107 bits (54), Expect = 5e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 9921814 agagaacgtgaagaaatggtggatatggggatactggatatcacccctgatgtatgcaca 9921755 Query: 447 aaatgcactatcggtgaatgagttcctaggtcacagctggaacaag 492 |||||| |||| || || || || ||||||||||||||||||||| Sbjct: 9921754 aaatgccatatcagtaaacgaatttctaggtcacagctggaacaag 9921709 Score = 103 bits (52), Expect = 7e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 84 caagcaacggaatcttctcttctttccagcatggacatatacgttgccgtcatggctcat 143 ||||||| || |||| ||||||| |||||||||||||||| | ||||| |||||| |||| Sbjct: 9896661 caagcaaagggatctactcttctatccagcatggacatattccttgccatcatggatcat 9896602 Query: 144 taagacccccctctccttgctcaatgtaacaatttgggtcggcataacatactatggcat 203 |||||| || ||||||| || ||| || |||||||||| |||||||||||||| || Sbjct: 9896601 taagactccaatctccttccttaatacaataatttgggtctccataacatactatgttat 9896542 Query: 204 tggatttgatcc 215 |||||||||||| Sbjct: 9896541 tggatttgatcc 9896530 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Minus Query: 511 gaaccacttggaagcctagttctggaatctcgaggggtttttcctgatacgaagtggtac 570 |||||||||||||| |||||||||||||||| |||||||| || || | || ||||| Sbjct: 9895962 gaaccacttggaaggttagttctggaatctcgtggggttttcccggaggccaaatggtat 9895903 Query: 571 tggattggtgctggtgccttgctcggatatgtgctgctatttaatatcctttataccgtc 630 ||||||||| |||||||||||| ||||||||||| || || |||||||| || ||| || Sbjct: 9895902 tggattggtcttggtgccttgcttggatatgtgcttctgttcaatatcctctacaccatc 9895843 Query: 631 tgcctc 636 |||||| Sbjct: 9895842 tgcctc 9895837 Score = 81.8 bits (41), Expect = 3e-12 Identities = 121/150 (80%) Strand = Plus / Minus Query: 19 ttgatgattatgttcaatggtttagcagaagtaggtctaactattgcaaagctccctgnn 78 |||||||| ||||||||||| || |||||| | || ||| |||||||||||||||| | Sbjct: 9961872 ttgatgatcatgttcaatgggttggcagaaatgggcctagctattgcaaagctcccggtt 9961813 Query: 79 nnnnncaagcaacggaatcttctcttctttccagcatggacatatacgttgccgtcatgg 138 |||||||||| |||| |||||| |||||| ||||| ||| | ||||| |||||| Sbjct: 9961812 ttcttcaagcaacgggatctattcttctatccagcttggacgtattccttgccatcatgg 9961753 Query: 139 ctcattaagacccccctctccttgctcaat 168 || |||||||||| ||||||| |||||| Sbjct: 9961752 atccttaagacccctatctccttcctcaat 9961723 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||||||||| ||||||||||| ||||| |||||||| | || || | Sbjct: 9961305 aagaaatggtggatatggggttactggatatcaccccttatgtatgcactgaacacattg 9961246 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||| ||||||||| |||||||||||||| Sbjct: 9961245 gcagttaatgaattcctaggtaacagctggaacaag 9961210 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 113 catggacatatacgttgccgtcatggctcattaagacccccctctccttgctcaatgtaa 172 ||||||||||| | ||||| || ||| ||||||||| ||| ||||||| ||||| || Sbjct: 10018085 catggacatattccttgccatcttggatcattaagatccctatctccttcctcaacacaa 10018026 Query: 173 caatttgggtcggcataacatactatggcattggatttgatcc 215 || |||||||| | |||||||||| | ||||||||||||||| Sbjct: 10018025 cagtttgggtcttcctaacatactacgtcattggatttgatcc 10017983 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 276 tggactcttccgcttcattgctggtcttgcaaggcatcaggttgttgcaagcacc 330 |||||| ||||| |||||||||| |||| ||||||||| ||||||||||||||| Sbjct: 9896384 tggacttttccgtttcattgctgctcttacaaggcatccagttgttgcaagcacc 9896330 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 392 atgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatg 451 |||| ||||| |||||||||||| ||| |||||||| ||||| ||||||||| ||| | Sbjct: 10017613 atgtcaagaaatggtggatatggttgtattggatatcacccctaatgtatgccttaaacg 10017554 Query: 452 cactatcggtgaatgagttcctaggtcacagctggaacaag 492 | || | || ||||| ||||||||||| | |||||||||| Sbjct: 10017553 ctttagccgtaaatgaattcctaggtcaaatctggaacaag 10017513 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 408 gatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtgaatga 467 |||||||| |||||||| ||| |||||||||||||| | |||||| || | || ||||| Sbjct: 9896138 gatatgggagtactggacatcacccctgatgtatgcactaaatgccttagcagtaaatga 9896079 Query: 468 gttcctaggtcacagctggaa 488 |||||| ||| ||||||||| Sbjct: 9896078 attcctaagtcccagctggaa 9896058 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 226 agattttttagacagttcctgctgctctttttaatgaatgaagcatcatctggactcttc 285 |||||||||||||| ||||| ||| ||| | ||| ||| ||| |||||||||| ||| Sbjct: 9961585 agattttttagacaattcctagcgctttttgttatgtctgaggcaacatctggacttttc 9961526 Query: 286 cgcttcattgctggtcttgcaaggcatcaggttgttgcaag 326 |||||||||||| ||| ||||| ||| |||||| ||||| Sbjct: 9961525 cgcttcattgcttcccttacaagggatccggttgtggcaag 9961485 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Minus Query: 283 ttccgcttcattgctggtcttgcaaggcatcaggttgttgcaagcaccctcggttccttc 342 ||||||||||||| || ||| ||||||||| |||| ||||||||| | | || | ||| Sbjct: 10017833 ttccgcttcattgttgcccttacaaggcatccggttattgcaagcaacatgggcccattc 10017774 Query: 343 tgcatactaatttttatgct 362 ||||| || ||||||||||| Sbjct: 10017773 tgcatcctcatttttatgct 10017754 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 551 ttcctgatacgaagtggtactggattggtgctggtgccttgctcggatatgtgct 605 ||||||| || || ||||| |||||| || ||| |||||||||||||||||||| Sbjct: 10017371 ttcctgagaccaaatggtattggattagtattggcgccttgctcggatatgtgct 10017317
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 188 bits (95), Expect = 2e-44 Identities = 190/224 (84%) Strand = Plus / Minus Query: 4 ctcttctttgggattttgatgattatgttcaatggtttagcagaagtaggtctaactatt 63 |||||||||||||| ||||||| |||||||| || || |||||||| |||||||||||| Sbjct: 77828 ctcttctttgggatcctgatgatcatgttcaacggattggcagaagttggtctaactatt 77769 Query: 64 gcaaagctccctgnnnnnnncaagcaacggaatcttctcttctttccagcatggacatat 123 ||||| ||||||| ||||||| || |||| ||||||| ||||||||||||||| Sbjct: 77768 gcaaaactccctgttttcttcaagcaaagggatctcctcttctatccagcatggacatac 77709 Query: 124 acgttgccgtcatggctcattaagacccccctctccttgctcaatgtaacaatttgggtc 183 | || || |||||| |||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 77708 tccttaccatcatggatcattaagactccactctccttgctcaatgtaacaatatgggtc 77649 Query: 184 ggcataacatactatggcattggatttgatcccaacgtacagag 227 ||||||||| |||| |||||||||||||||||| ||| |||| Sbjct: 77648 ttcataacatattatgtcattggatttgatcccaatgtagagag 77605 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Minus Query: 230 tttttagacagttcctgctgctctttttaatgaatgaagcatcatctggactcttccgct 289 |||||||||||||||||||||| || |||||||||| ||||||||||||| || |||| Sbjct: 77519 tttttagacagttcctgctgcttttagtaatgaatgagacatcatctggactgtttcgct 77460 Query: 290 tcattgctggtcttgcaaggcatcaggttgttgcaagcaccctcggttccttctgcatac 349 |||||||||| |||||||||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 77459 tcattgctgggtttgcaaggcatcaggttgttgcaagcactatgggttcattctgtatac 77400 Query: 350 taatttttatgct 362 | ||||||||||| Sbjct: 77399 tcatttttatgct 77387 Score = 117 bits (59), Expect = 5e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 511 gaaccacttggaagcctagttctggaatctcgaggggtttttcctgatacgaagtggtac 570 |||||||||||||| ||||||||||||||||| ||| |||||||||| | || ||||| Sbjct: 116555 gaaccacttggaaggctagttctggaatctcgtgggttttttcctgaggccaaatggtat 116496 Query: 571 tggattggtgctggtgccttgctcggatatgtgctgctatttaatatcctttataccgtc 630 |||||||||| |||||||||||||||||||||| | ||||| ||| |||| || ||| || Sbjct: 116495 tggattggtgttggtgccttgctcggatatgtgattctattaaatgtcctctacaccatc 116436 Query: 631 tgcctca 637 || |||| Sbjct: 116435 tgtctca 116429 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 491 agacaatccctggtttcaaggaaccacttggaagcctagttctggaatctcgaggggttt 550 ||||||| |||||||||| ||| |||||||||| |||||||| ||||| || || |||| Sbjct: 77075 agacaatacctggtttcagggagccacttggaaaactagttcttgaatcccgtggagttt 77016 Query: 551 ttcctgatacgaagtggtactggattggtgctggtgccttgctcggatatgtgctgctat 610 | ||||| | || ||||| |||||||||| |||||| ||||||||||| || ||||||| Sbjct: 77015 tccctgaggccaaatggtattggattggtgttggtgcattgctcggatacgtcctgctat 76956 Query: 611 ttaatatcctttataccgtctgcctcacattcctc 645 | |||||||| || || ||||||||||||||||| Sbjct: 76955 tcaatatcctctacacaatctgcctcacattcctc 76921 Score = 107 bits (54), Expect = 5e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 77261 agagaacgtgaagaaatggtggatatggggatactggatatcacccctgatgtatgcaca 77202 Query: 447 aaatgcactatcggtgaatgagttcctaggtcacagctggaacaag 492 |||||| |||| || || || || ||||||||||||||||||||| Sbjct: 77201 aaatgccatatcagtaaacgaatttctaggtcacagctggaacaag 77156 Score = 103 bits (52), Expect = 7e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 84 caagcaacggaatcttctcttctttccagcatggacatatacgttgccgtcatggctcat 143 ||||||| || |||| ||||||| |||||||||||||||| | ||||| |||||| |||| Sbjct: 52108 caagcaaagggatctactcttctatccagcatggacatattccttgccatcatggatcat 52049 Query: 144 taagacccccctctccttgctcaatgtaacaatttgggtcggcataacatactatggcat 203 |||||| || ||||||| || ||| || |||||||||| |||||||||||||| || Sbjct: 52048 taagactccaatctccttccttaatacaataatttgggtctccataacatactatgttat 51989 Query: 204 tggatttgatcc 215 |||||||||||| Sbjct: 51988 tggatttgatcc 51977 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Minus Query: 511 gaaccacttggaagcctagttctggaatctcgaggggtttttcctgatacgaagtggtac 570 |||||||||||||| |||||||||||||||| |||||||| || || | || ||||| Sbjct: 51409 gaaccacttggaaggttagttctggaatctcgtggggttttcccggaggccaaatggtat 51350 Query: 571 tggattggtgctggtgccttgctcggatatgtgctgctatttaatatcctttataccgtc 630 ||||||||| |||||||||||| ||||||||||| || || |||||||| || ||| || Sbjct: 51349 tggattggtcttggtgccttgcttggatatgtgcttctgttcaatatcctctacaccatc 51290 Query: 631 tgcctc 636 |||||| Sbjct: 51289 tgcctc 51284 Score = 81.8 bits (41), Expect = 3e-12 Identities = 121/150 (80%) Strand = Plus / Minus Query: 19 ttgatgattatgttcaatggtttagcagaagtaggtctaactattgcaaagctccctgnn 78 |||||||| ||||||||||| || |||||| | || ||| |||||||||||||||| | Sbjct: 117319 ttgatgatcatgttcaatgggttggcagaaatgggcctagctattgcaaagctcccggtt 117260 Query: 79 nnnnncaagcaacggaatcttctcttctttccagcatggacatatacgttgccgtcatgg 138 |||||||||| |||| |||||| |||||| ||||| ||| | ||||| |||||| Sbjct: 117259 ttcttcaagcaacgggatctattcttctatccagcttggacgtattccttgccatcatgg 117200 Query: 139 ctcattaagacccccctctccttgctcaat 168 || |||||||||| ||||||| |||||| Sbjct: 117199 atccttaagacccctatctccttcctcaat 117170 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||||||||| ||||||||||| ||||| |||||||| | || || | Sbjct: 116752 aagaaatggtggatatggggttactggatatcaccccttatgtatgcactgaacacattg 116693 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||| ||||||||| |||||||||||||| Sbjct: 116692 gcagttaatgaattcctaggtaacagctggaacaag 116657 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 276 tggactcttccgcttcattgctggtcttgcaaggcatcaggttgttgcaagcacc 330 |||||| ||||| |||||||||| |||| ||||||||| ||||||||||||||| Sbjct: 51831 tggacttttccgtttcattgctgctcttacaaggcatccagttgttgcaagcacc 51777 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 408 gatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtgaatga 467 |||||||| |||||||| ||| |||||||||||||| | |||||| || | || ||||| Sbjct: 51585 gatatgggagtactggacatcacccctgatgtatgcactaaatgccttagcagtaaatga 51526 Query: 468 gttcctaggtcacagctggaa 488 |||||| ||| ||||||||| Sbjct: 51525 attcctaagtcccagctggaa 51505 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 226 agattttttagacagttcctgctgctctttttaatgaatgaagcatcatctggactcttc 285 |||||||||||||| ||||| ||| ||| | ||| ||| ||| |||||||||| ||| Sbjct: 117032 agattttttagacaattcctagcgctttttgttatgtctgaggcaacatctggacttttc 116973 Query: 286 cgcttcattgctggtcttgcaaggcatcaggttgttgcaag 326 |||||||||||| ||| ||||| ||| |||||| ||||| Sbjct: 116972 cgcttcattgcttcccttacaagggatccggttgtggcaag 116932
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 188 bits (95), Expect = 2e-44 Identities = 190/224 (84%) Strand = Plus / Minus Query: 4 ctcttctttgggattttgatgattatgttcaatggtttagcagaagtaggtctaactatt 63 |||||||||||||| ||||||| |||||||| || || |||||||| |||||||||||| Sbjct: 105068 ctcttctttgggatcctgatgatcatgttcaacggattggcagaagttggtctaactatt 105009 Query: 64 gcaaagctccctgnnnnnnncaagcaacggaatcttctcttctttccagcatggacatat 123 ||||| ||||||| ||||||| || |||| ||||||| ||||||||||||||| Sbjct: 105008 gcaaaactccctgttttcttcaagcaaagggatctcctcttctatccagcatggacatac 104949 Query: 124 acgttgccgtcatggctcattaagacccccctctccttgctcaatgtaacaatttgggtc 183 | || || |||||| |||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 104948 tccttaccatcatggatcattaagactccactctccttgctcaatgtaacaatatgggtc 104889 Query: 184 ggcataacatactatggcattggatttgatcccaacgtacagag 227 ||||||||| |||| |||||||||||||||||| ||| |||| Sbjct: 104888 ttcataacatattatgtcattggatttgatcccaatgtagagag 104845 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Minus Query: 230 tttttagacagttcctgctgctctttttaatgaatgaagcatcatctggactcttccgct 289 |||||||||||||||||||||| || |||||||||| ||||||||||||| || |||| Sbjct: 104759 tttttagacagttcctgctgcttttagtaatgaatgagacatcatctggactgtttcgct 104700 Query: 290 tcattgctggtcttgcaaggcatcaggttgttgcaagcaccctcggttccttctgcatac 349 |||||||||| |||||||||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 104699 tcattgctgggtttgcaaggcatcaggttgttgcaagcactatgggttcattctgtatac 104640 Query: 350 taatttttatgct 362 | ||||||||||| Sbjct: 104639 tcatttttatgct 104627 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 491 agacaatccctggtttcaaggaaccacttggaagcctagttctggaatctcgaggggttt 550 ||||||| |||||||||| ||| |||||||||| |||||||| ||||| || || |||| Sbjct: 104315 agacaatacctggtttcagggagccacttggaaaactagttcttgaatcccgtggagttt 104256 Query: 551 ttcctgatacgaagtggtactggattggtgctggtgccttgctcggatatgtgctgctat 610 | ||||| | || ||||| |||||||||| |||||| ||||||||||| || ||||||| Sbjct: 104255 tccctgaggccaaatggtattggattggtgttggtgcattgctcggatacgtcctgctat 104196 Query: 611 ttaatatcctttataccgtctgcctcacattcctc 645 | |||||||| || || ||||||||||||||||| Sbjct: 104195 tcaatatcctctacacaatctgcctcacattcctc 104161 Score = 107 bits (54), Expect = 5e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 104501 agagaacgtgaagaaatggtggatatggggatactggatatcacccctgatgtatgcaca 104442 Query: 447 aaatgcactatcggtgaatgagttcctaggtcacagctggaacaag 492 |||||| |||| || || || || ||||||||||||||||||||| Sbjct: 104441 aaatgccatatcagtaaacgaatttctaggtcacagctggaacaag 104396 Score = 103 bits (52), Expect = 7e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 84 caagcaacggaatcttctcttctttccagcatggacatatacgttgccgtcatggctcat 143 ||||||| || |||| ||||||| |||||||||||||||| | ||||| |||||| |||| Sbjct: 79348 caagcaaagggatctactcttctatccagcatggacatattccttgccatcatggatcat 79289 Query: 144 taagacccccctctccttgctcaatgtaacaatttgggtcggcataacatactatggcat 203 |||||| || ||||||| || ||| || |||||||||| |||||||||||||| || Sbjct: 79288 taagactccaatctccttccttaatacaataatttgggtctccataacatactatgttat 79229 Query: 204 tggatttgatcc 215 |||||||||||| Sbjct: 79228 tggatttgatcc 79217 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Minus Query: 511 gaaccacttggaagcctagttctggaatctcgaggggtttttcctgatacgaagtggtac 570 |||||||||||||| |||||||||||||||| |||||||| || || | || ||||| Sbjct: 78649 gaaccacttggaaggttagttctggaatctcgtggggttttcccggaggccaaatggtat 78590 Query: 571 tggattggtgctggtgccttgctcggatatgtgctgctatttaatatcctttataccgtc 630 ||||||||| |||||||||||| ||||||||||| || || |||||||| || ||| || Sbjct: 78589 tggattggtcttggtgccttgcttggatatgtgcttctgttcaatatcctctacaccatc 78530 Query: 631 tgcctc 636 |||||| Sbjct: 78529 tgcctc 78524 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 276 tggactcttccgcttcattgctggtcttgcaaggcatcaggttgttgcaagcacc 330 |||||| ||||| |||||||||| |||| ||||||||| ||||||||||||||| Sbjct: 79071 tggacttttccgtttcattgctgctcttacaaggcatccagttgttgcaagcacc 79017 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 408 gatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtgaatga 467 |||||||| |||||||| ||| |||||||||||||| | |||||| || | || ||||| Sbjct: 78825 gatatgggagtactggacatcacccctgatgtatgcactaaatgccttagcagtaaatga 78766 Query: 468 gttcctaggtcacagctggaa 488 |||||| ||| ||||||||| Sbjct: 78765 attcctaagtcccagctggaa 78745
>dbj|AK101649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033056H04, full insert sequence Length = 2420 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 498 ccctggtttcaaggaaccacttggaagcctagttctggaatctcgaggggtttttcctga 557 ||||||||||| ||| |||||||||| |||||||| ||||| || || ||||| ||||| Sbjct: 1541 ccctggtttcagggagccacttggaaaactagttcttgaatcccgtggagttttccctga 1482 Query: 558 tacgaagtggtactggattggtgctggtgccttgctcggatatgtgctgctatttaatat 617 | || ||||| |||||||||| |||||| ||||||||||| || |||||||| ||||| Sbjct: 1481 ggccaaatggtattggattggtgttggtgcattgctcggatacgtcctgctattcaatat 1422 Query: 618 cctttataccgtctgcctcacattcctc 645 ||| || || ||||||||||||||||| Sbjct: 1421 cctctacacaatctgcctcacattcctc 1394
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 113 catggacatatacgttgccgtcatggctcattaagacccccctctccttgctcaatgtaa 172 ||||||||||| | ||||| || ||| ||||||||| ||| ||||||| ||||| || Sbjct: 47389 catggacatattccttgccatcttggatcattaagatccctatctccttcctcaacacaa 47330 Query: 173 caatttgggtcggcataacatactatggcattggatttgatcc 215 || |||||||| | |||||||||| | ||||||||||||||| Sbjct: 47329 cagtttgggtcttcctaacatactacgtcattggatttgatcc 47287 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 392 atgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatg 451 |||| ||||| |||||||||||| ||| |||||||| ||||| ||||||||| ||| | Sbjct: 46917 atgtcaagaaatggtggatatggttgtattggatatcacccctaatgtatgccttaaacg 46858 Query: 452 cactatcggtgaatgagttcctaggtcacagctggaacaag 492 | || | || ||||| ||||||||||| | |||||||||| Sbjct: 46857 ctttagccgtaaatgaattcctaggtcaaatctggaacaag 46817 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Minus Query: 283 ttccgcttcattgctggtcttgcaaggcatcaggttgttgcaagcaccctcggttccttc 342 ||||||||||||| || ||| ||||||||| |||| ||||||||| | | || | ||| Sbjct: 47137 ttccgcttcattgttgcccttacaaggcatccggttattgcaagcaacatgggcccattc 47078 Query: 343 tgcatactaatttttatgct 362 ||||| || ||||||||||| Sbjct: 47077 tgcatcctcatttttatgct 47058 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 551 ttcctgatacgaagtggtactggattggtgctggtgccttgctcggatatgtgct 605 ||||||| || || ||||| |||||| || ||| |||||||||||||||||||| Sbjct: 46675 ttcctgagaccaaatggtattggattagtattggcgccttgctcggatatgtgct 46621
>ref|NM_192727.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4299 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 367 ggtggattcgtcctggcaagagagaatgtaaagaagtggtggatatgggggtactggata 426 ||||||||| | || ||||||||| | || ||||| |||||||| ||||| ||||||||| Sbjct: 2080 ggtggattcattctagcaagagagcaagtgaagaaatggtggatttggggctactggata 2139 Query: 427 tcgcccctgatgtatgcccaaaatgc 452 || || ||||||| ||||| ||||| Sbjct: 2140 tccccgatgatgtacgcccagaatgc 2165
>gb|AY271618.1| Oryza sativa (indica cultivar-group) PDR-type ABC transporter 9 mRNA, complete cds Length = 4700 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 367 ggtggattcgtcctggcaagagagaatgtaaagaagtggtggatatgggggtactggata 426 ||||||||| | || ||||||||| | || ||||| |||||||| ||||| ||||||||| Sbjct: 2099 ggtggattcattctagcaagagagcaagtgaagaaatggtggatttggggctactggata 2158 Query: 427 tcgcccctgatgtatgcccaaaatgc 452 || || ||||||| ||||| ||||| Sbjct: 2159 tccccgatgatgtacgcccagaatgc 2184
>dbj|AK100135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G13, full insert sequence Length = 4227 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 367 ggtggattcgtcctggcaagagagaatgtaaagaagtggtggatatgggggtactggata 426 ||||||||| | || ||||||||| | || ||||| |||||||| ||||| ||||||||| Sbjct: 1588 ggtggattcattctagcaagagagcaagtgaagaaatggtggatttggggctactggata 1647 Query: 427 tcgcccctgatgtatgcccaaaatgc 452 || || ||||||| ||||| ||||| Sbjct: 1648 tccccgatgatgtacgcccagaatgc 1673
>ref|NM_128248.1| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT2G26910 mRNA, complete cds Length = 4575 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||||||||| |||||||| || || |||||||||| ||||| ||| || ||| Sbjct: 2029 tggtggatatggggttactggatttctccattgatgtatgctcaaaacgcagcttctgtg 2088 Query: 463 aatgagttcctaggtca 479 ||||||||||| ||||| Sbjct: 2089 aatgagttccttggtca 2105
>gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 map B68, complete sequence Length = 87978 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||||||||| |||||||| || || |||||||||| ||||| ||| || ||| Sbjct: 19776 tggtggatatggggttactggatttctccattgatgtatgctcaaaacgcagcttctgtg 19717 Query: 463 aatgagttcctaggtca 479 ||||||||||| ||||| Sbjct: 19716 aatgagttccttggtca 19700
>tpg|BK001003.1| TPA: TPA_exp: Arabidopsis thaliana PDR4 ABC transporter (At2g29940) gene, complete cds Length = 6252 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||||||||| |||||||| || || |||||||||| ||||| ||| || ||| Sbjct: 3128 tggtggatatggggttactggatttctccattgatgtatgctcaaaacgcagcttctgtg 3187 Query: 463 aatgagttcctaggtca 479 ||||||||||| ||||| Sbjct: 3188 aatgagttccttggtca 3204
>ref|XM_464576.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4335 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 2077 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 2136 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 2137 gcagttaatgagttccttggccacagctggaacaag 2172
>ref|NM_192730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4254 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 1857 cataacatactatgtcattggatttgatccca 1888 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 1755 caagcaaagggatcttctcttctttcctgcatgg 1788 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 1942 tcatctgcactattccgcttcattgctgg 1970 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 2068 aagaaatggtggatttggggttactggatatc 2099
>tpg|BK001018.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.10 PDR4 ABC transporter (pdr4) gene, complete cds Length = 7801 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 4019 cataacatactatgtcattggatttgatccca 4050 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 3917 caagcaaagggatcttctcttctttcctgcatgg 3950 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 4280 tcatctgcactattccgcttcattgctgg 4308 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 4507 aagaaatggtggatttggggttactggatatc 4538
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 6071465 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 6071524 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 6071525 gcagttaatgagttccttggccacagctggaacaag 6071560
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 24107257 cataacatactatgtcattggatttgatccca 24107226 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||| ||||| ||||||||||| || |||||||||| || ||||| | || ||| Sbjct: 24047728 tggtggatttggggctactggatatctccgatgatgtatgcacagaatgccgtctcagtg 24047669 Query: 463 aatgagttcctaggtcacagctggaacaa 491 |||||||| | || ||||||||| |||| Sbjct: 24047668 aatgagtttttggggcacagctgggacaa 24047640 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgc 452 ||||| |||||||| ||||| ||||||||||| || ||||||| ||||| ||||| Sbjct: 24074612 aagaaatggtggatttggggctactggatatccccgatgatgtacgcccagaatgc 24074557 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||| ||||| |||||||| || || |||||||||| || Sbjct: 24065912 agagaaagtgaagaaatggtggatttggggctactggatctccccgatgatgtatgcaca 24065853 Query: 447 aaatgcactatcggtgaatgagtt 470 ||||| | || ||||||||||| Sbjct: 24065852 gaatgccatctcagtgaatgagtt 24065829 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 24107359 caagcaaagggatcttctcttctttcctgcatgg 24107326 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 24106996 tcatctgcactattccgcttcattgctgg 24106968 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 24106769 aagaaatggtggatttggggttactggatatc 24106738
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 83079 cataacatactatgtcattggatttgatccca 83048 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||| ||||| ||||||||||| || |||||||||| || ||||| | || ||| Sbjct: 23550 tggtggatttggggctactggatatctccgatgatgtatgcacagaatgccgtctcagtg 23491 Query: 463 aatgagttcctaggtcacagctggaacaa 491 |||||||| | || ||||||||| |||| Sbjct: 23490 aatgagtttttggggcacagctgggacaa 23462 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgc 452 ||||| |||||||| ||||| ||||||||||| || ||||||| ||||| ||||| Sbjct: 50434 aagaaatggtggatttggggctactggatatccccgatgatgtacgcccagaatgc 50379 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||| ||||| |||||||| || || |||||||||| || Sbjct: 41734 agagaaagtgaagaaatggtggatttggggctactggatctccccgatgatgtatgcaca 41675 Query: 447 aaatgcactatcggtgaatgagtt 470 ||||| | || ||||||||||| Sbjct: 41674 gaatgccatctcagtgaatgagtt 41651 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 83181 caagcaaagggatcttctcttctttcctgcatgg 83148 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 82818 tcatctgcactattccgcttcattgctgg 82790 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 82591 aagaaatggtggatttggggttactggatatc 82560
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 36947 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 37006 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 37007 gcagttaatgagttccttggccacagctggaacaag 37042
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 92304 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 92363 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 92364 gcagttaatgagttccttggccacagctggaacaag 92399
>dbj|AK121722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081K15, full insert sequence Length = 4828 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 2076 cataacatactatgtcattggatttgatccca 2107 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 1974 caagcaaagggatcttctcttctttcctgcatgg 2007 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 2161 tcatctgcactattccgcttcattgctgg 2189 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 2287 aagaaatggtggatttggggttactggatatc 2318
>dbj|AK101855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069N21, full insert sequence Length = 4885 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 3182 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 3123 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 3122 gcagttaatgagttccttggccacagctggaacaag 3087
>dbj|AK073104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F20, full insert sequence Length = 3541 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 687 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 746 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 747 gcagttaatgagttccttggccacagctggaacaag 782
>dbj|AK065988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D14, full insert sequence Length = 4446 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 1692 cataacatactatgtcattggatttgatccca 1723 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 1590 caagcaaagggatcttctcttctttcctgcatgg 1623 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 1777 tcatctgcactattccgcttcattgctgg 1805 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 1903 aagaaatggtggatttggggttactggatatc 1934
>dbj|AK059072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H08, full insert sequence Length = 1476 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 137 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 78 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 77 gcagttaatgagttccttggccacagctggaacaag 42
>emb|AJ535048.1|OSA535048 Oryza sativa (japonica cultivar-group) pdr7 gene for PDR-like ABC transporter, exons 1-23 Length = 6409 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcacta 456 ||||| |||||||| ||||| |||||| || || ||||||||||| || ||||| || Sbjct: 3206 aagaaatggtggatttggggctactggtcctctcctctgatgtatgcacagaatgccata 3265 Query: 457 tcggtgaatgagttcctaggtcacagctggaacaag 492 | || ||||||||||| || ||||||||||||||| Sbjct: 3266 gcagttaatgagttccttggccacagctggaacaag 3301
>emb|AJ535047.1|OSA535047 Oryza sativa (japonica cultivar-group) pdr8 gene for PDR-like ABC transporter, exons 1-21 Length = 7801 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 cataacatactatggcattggatttgatccca 217 |||||||||||||| ||||||||||||||||| Sbjct: 4019 cataacatactatgtcattggatttgatccca 4050 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 caagcaacggaatcttctcttctttccagcatgg 117 ||||||| || |||||||||||||||| |||||| Sbjct: 3917 caagcaaagggatcttctcttctttcctgcatgg 3950 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 tcatctggactcttccgcttcattgctgg 299 ||||||| ||| ||||||||||||||||| Sbjct: 4280 tcatctgcactattccgcttcattgctgg 4308 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatc 428 ||||| |||||||| ||||| ||||||||||| Sbjct: 4507 aagaaatggtggatttggggttactggatatc 4538
>ref|NM_192726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4344 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 384 aagagagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgc 443 ||||||||| || ||||| |||||||| ||||| |||||||| || || |||||||||| Sbjct: 2106 aagagagaaagtgaagaaatggtggatttggggctactggatctccccgatgatgtatgc 2165 Query: 444 ccaaaatgcactatcggtgaatgagtt 470 || ||||| | || ||||||||||| Sbjct: 2166 acagaatgccatctcagtgaatgagtt 2192
>ref|NM_192724.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4353 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 382 gcaagagagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtat 441 |||||||| || || || || |||||||| ||||| ||||||||||| || |||||||| Sbjct: 2110 gcaagagataaagtgaataaatggtggatttggggctactggatatctccgatgatgtat 2169 Query: 442 gcccaaaatgcactatcggtgaatgagttcctaggtcacagctggaacaa 491 || || ||||| | || ||||||||||| | || ||||||||| |||| Sbjct: 2170 gcacagaatgccgtctcagtgaatgagtttttggggcacagctgggacaa 2219
>ref|NM_101421.1| Arabidopsis thaliana PDR12; ATPase, coupled to transmembrane movement of substances AT1G15520 (PDR12) mRNA, complete cds Length = 4272 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggat 425 |||||||||||||||||||| |||||||| Sbjct: 2080 aagaagtggtggatatggggttactggat 2108
>tpg|BK001015.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.4 PDR1 ABC transporter (pdr1) gene, complete cds Length = 8375 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||| ||||| ||||||||||| || |||||||||| || ||||| | || ||| Sbjct: 4302 tggtggatttggggctactggatatctccgatgatgtatgcacagaatgccgtctcagtg 4361 Query: 463 aatgagttcctaggtcacagctggaacaa 491 |||||||| | || ||||||||| |||| Sbjct: 4362 aatgagtttttggggcacagctgggacaa 4390
>tpg|BK001011.1| TPA: TPA_exp: Arabidopsis thaliana PDR12 ABC transporter (At1g15520) gene, complete cds Length = 6183 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggat 425 |||||||||||||||||||| |||||||| Sbjct: 3117 aagaagtggtggatatggggttactggat 3145
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 397 aagaagtggtggatatgggggtactggat 425 |||||||||||||||||||| |||||||| Sbjct: 38433 aagaagtggtggatatggggttactggat 38405
>emb|AJ535045.1|OSA535045 Oryza sativa (japonica cultivar-group) pdr10 gene for PDR-like ABC transporter, exons 1-21 Length = 8375 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 403 tggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgcactatcggtg 462 |||||||| ||||| ||||||||||| || |||||||||| || ||||| | || ||| Sbjct: 4302 tggtggatttggggctactggatatctccgatgatgtatgcacagaatgccgtctcagtg 4361 Query: 463 aatgagttcctaggtcacagctggaacaa 491 |||||||| | || ||||||||| |||| Sbjct: 4362 aatgagtttttggggcacagctgggacaa 4390
>ref|XM_478448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4365 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 402 gtggtggatatgggggtactggatatcgcccctgatgtat 441 ||||||||||||||| ||||||| ||| ||| |||||||| Sbjct: 2136 gtggtggatatggggctactggacatctcccatgatgtat 2175
>tpg|BK001017.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.7 PDR3 ABC transporter (pdr3) gene, complete cds Length = 6575 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgc 452 ||||| |||||||| ||||| ||||||||||| || ||||||| ||||| ||||| Sbjct: 3486 aagaaatggtggatttggggctactggatatccccgatgatgtacgcccagaatgc 3541
>tpg|BK001016.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.6 PDR2 ABC transporter (pdr2) gene, complete cds Length = 8415 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||| ||||| |||||||| || || |||||||||| || Sbjct: 3821 agagaaagtgaagaaatggtggatttggggctactggatctccccgatgatgtatgcaca 3880 Query: 447 aaatgcactatcggtgaatgagtt 470 ||||| | || ||||||||||| Sbjct: 3881 gaatgccatctcagtgaatgagtt 3904
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 402 gtggtggatatgggggtactggatatcgcccctgatgtat 441 ||||||||||||||| ||||||| ||| ||| |||||||| Sbjct: 20158772 gtggtggatatggggctactggacatctcccatgatgtat 20158811
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 402 gtggtggatatgggggtactggatatcgcccctgatgtat 441 ||||||||||||||| ||||||| ||| ||| |||||||| Sbjct: 61160 gtggtggatatggggctactggacatctcccatgatgtat 61199
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1657_A07 Length = 125217 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 402 gtggtggatatgggggtactggatatcgcccctgatgtat 441 ||||||||||||||| ||||||| ||| ||| |||||||| Sbjct: 123375 gtggtggatatggggctactggacatctcccatgatgtat 123414
>emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) pdr5 gene for PDR-like ABC transporter, exons 1-19 Length = 12922 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 402 gtggtggatatgggggtactggatatcgcccctgatgtat 441 ||||||||||||||| ||||||| ||| ||| |||||||| Sbjct: 6912 gtggtggatatggggctactggacatctcccatgatgtat 6951
>emb|AJ535046.1|OSA535046 Oryza sativa (japonica cultivar-group) pdr9 gene for PDR-like ABC transporter, exons 1-21 Length = 6575 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 397 aagaagtggtggatatgggggtactggatatcgcccctgatgtatgcccaaaatgc 452 ||||| |||||||| ||||| ||||||||||| || ||||||| ||||| ||||| Sbjct: 3486 aagaaatggtggatttggggctactggatatccccgatgatgtacgcccagaatgc 3541
>emb|AJ535044.1|OSA535044 Oryza sativa (japonica cultivar-group) pdr11 gene for PDR-like ABC transporter, exons 1-21 Length = 8415 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 387 agagaatgtaaagaagtggtggatatgggggtactggatatcgcccctgatgtatgccca 446 |||||| || ||||| |||||||| ||||| |||||||| || || |||||||||| || Sbjct: 3821 agagaaagtgaagaaatggtggatttggggctactggatctccccgatgatgtatgcaca 3880 Query: 447 aaatgcactatcggtgaatgagtt 470 ||||| | || ||||||||||| Sbjct: 3881 gaatgccatctcagtgaatgagtt 3904
>gb|AC159939.3| Loxodonta africana clone VMRC15-235M14, complete sequence Length = 144550 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 241 ttcctgctgctctttttaatgaatgaa 267 |||||||||||| |||||||||||||| Sbjct: 17615 ttcctgctgctcattttaatgaatgaa 17589
>ref|XM_512489.1| PREDICTED: Pan troglodytes similar to GTP binding protein 3 (mitochondrial) isoform V; mitochondrial GTP binding protein (LOC455835), mRNA Length = 1263 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1094 tggtgctggtgccttgctcgg 1074
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gatgattatgttcaatggttt 41 ||||||||||||||||||||| Sbjct: 2058840 gatgattatgttcaatggttt 2058820
>ref|NM_032620.1| Homo sapiens GTP binding protein 3 (mitochondrial) (GTPBP3), transcript variant V, mRNA Length = 2545 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1352 tggtgctggtgccttgctcgg 1332
>ref|NM_133644.1| Homo sapiens GTP binding protein 3 (mitochondrial) (GTPBP3), transcript variant IV, mRNA Length = 1960 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1463 tggtgctggtgccttgctcgg 1443
>gb|BC019261.1| Homo sapiens GTP binding protein 3 (mitochondrial), mRNA (cDNA clone MGC:2623 IMAGE:3501739), complete cds Length = 2567 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1346 tggtgctggtgccttgctcgg 1326
>gb|BC008924.2| Homo sapiens GTP binding protein 3 (mitochondrial), mRNA (cDNA clone IMAGE:3678165), complete cds Length = 2096 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 882 tggtgctggtgccttgctcgg 862
>gb|AF361481.1| Homo sapiens mitochondrial GTP-binding protein 1 (GTPBP3) gene, complete cds; nuclear gene for mitochondrial product Length = 8000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 5175 tggtgctggtgccttgctcgg 5155
>gb|AY078987.1| Homo sapiens GTP-binding protein isoform IV (GTPBP3) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1960 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1463 tggtgctggtgccttgctcgg 1443
>gb|AF360744.1| Homo sapiens mitochondrial GTP binding protein 3 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1781 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1284 tggtgctggtgccttgctcgg 1264
>gb|AF360743.1| Homo sapiens mitochondrial GTP binding protein 2 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1801 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1304 tggtgctggtgccttgctcgg 1284
>gb|AF360742.1| Homo sapiens mitochondrial GTP binding protein 1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1864 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1367 tggtgctggtgccttgctcgg 1347
>gb|AY078988.1| Homo sapiens GTP-binding protein isoform V (GTPBP3) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2545 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1367 tggtgctggtgccttgctcgg 1347
>emb|AL596342.3| Human DNA sequence from clone RP11-198A7 on chromosome 1 Contains the 5' end of the RGS18 gene for regulator of G-protein signalling 18, complete sequence Length = 154968 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 tcctgctgctctttttaatga 262 ||||||||||||||||||||| Sbjct: 40087 tcctgctgctctttttaatga 40067
>gb|AC010463.6| Homo sapiens chromosome 19 clone CTD-2278I10, complete sequence Length = 118338 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 32956 tggtgctggtgccttgctcgg 32976
>emb|CR624592.1| full-length cDNA clone CS0DC015YO03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1480 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 313 tggtgctggtgccttgctcgg 293
>dbj|AK091035.1| Homo sapiens cDNA FLJ33716 fis, clone BRAWH2009238 Length = 2919 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 2143 tggtgctggtgccttgctcgg 2123
>dbj|AK027606.1| Homo sapiens cDNA FLJ14700 fis, clone NT2RP3000046, weakly similar to MITOCHONDRIAL GTPASE MSS1 PRECURSOR Length = 2545 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1352 tggtgctggtgccttgctcgg 1332
>emb|CR593057.1| full-length cDNA clone CS0DL008YC04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1909 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1449 tggtgctggtgccttgctcgg 1429
>emb|Z70524.1|SPPDR5ABC S.polyrrhiza mRNA for PDR5-like ABC transporter Length = 4646 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 460 gtgaatgagttcctaggtcacagctggaacaag 492 ||||| |||||||| || ||||||||||||||| Sbjct: 2307 gtgaacgagttcctcgggcacagctggaacaag 2339
>gb|BC017207.2| Homo sapiens GTP binding protein 3 (mitochondrial), mRNA (cDNA clone MGC:4291 IMAGE:3634066), complete cds Length = 1904 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 tggtgctggtgccttgctcgg 596 ||||||||||||||||||||| Sbjct: 1337 tggtgctggtgccttgctcgg 1317
>emb|AL451009.3| Human DNA sequence from clone RP11-440G22 on chromosome 1, complete sequence Length = 68697 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 tcctgctgctctttttaatga 262 ||||||||||||||||||||| Sbjct: 53618 tcctgctgctctttttaatga 53598
>gb|AF304372.2| Nicotiana alata putative beta-1,3-glucan synthase (Gsl1) mRNA, complete cds Length = 6266 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 caagagagaatgtaaagaag 402 |||||||||||||||||||| Sbjct: 5020 caagagagaatgtaaagaag 5001
>gb|AY274815.1| Scutellonema bradys large subunit ribosomal RNA gene and intergenic spacer, partial sequence Length = 842 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tttaatgaatgaagcatcat 274 |||||||||||||||||||| Sbjct: 782 tttaatgaatgaagcatcat 763
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgggattttgatgattat 29 |||||||||||||||||||| Sbjct: 166705 tttgggattttgatgattat 166724
>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project) Length = 94315 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgggattttgatgattat 29 |||||||||||||||||||| Sbjct: 45945 tttgggattttgatgattat 45964
>gb|AC112717.5| Homo sapiens BAC clone RP11-481H16 from 4, complete sequence Length = 189406 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 ctgctatttaatatccttta 623 |||||||||||||||||||| Sbjct: 67779 ctgctatttaatatccttta 67760
>gb|AC182361.3| Spermophilus tridecemlineatus clone VMRC20-433G18, complete sequence Length = 140138 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tgatgattatgttcaatggt 39 |||||||||||||||||||| Sbjct: 70904 tgatgattatgttcaatggt 70923
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctgctctttttaatgaatga 266 |||||||||||||||||||| Sbjct: 832698 ctgctctttttaatgaatga 832717
>gb|AC093834.3| Homo sapiens BAC clone RP11-423L1 from 4, complete sequence Length = 177582 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 ctgctatttaatatccttta 623 |||||||||||||||||||| Sbjct: 60970 ctgctatttaatatccttta 60951
>ref|XM_680820.1| PREDICTED: Danio rerio similar to LOC445834 protein (LOC557710), mRNA Length = 1576 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gacatatacgttgccgtcat 136 |||||||||||||||||||| Sbjct: 449 gacatatacgttgccgtcat 430
>ref|NM_072728.1| Caenorhabditis elegans C16D9.8 (C16D9.8) mRNA, complete cds Length = 417 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tggtactggattggtgctgg 584 |||||||||||||||||||| Sbjct: 335 tggtactggattggtgctgg 316
>gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, complete sequence Length = 139076 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttcaaggaaccacttggaa 523 |||||||||||||||||||| Sbjct: 56365 tttcaaggaaccacttggaa 56346
>dbj|AB109389.1| Nicotiana tabacum NtPDR2 mRNA for PDR-type ABC transporter 2, partial cds Length = 3411 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 taacatactatggcattggatttgatcc 215 ||||||| |||| ||||||||||||||| Sbjct: 821 taacatattatgtcattggatttgatcc 848
>dbj|AB109388.1| Nicotiana tabacum NtPDR1 gene for PDR-type ABC transporter 1, complete cds Length = 11706 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 taacatactatggcattggatttgatcc 215 |||||||||| | ||||||||||||||| Sbjct: 8270 taacatactacgtcattggatttgatcc 8297
>gb|U64858.1| Caenorhabditis elegans cosmid C16D9, complete sequence Length = 36626 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 tggtactggattggtgctgg 584 |||||||||||||||||||| Sbjct: 32983 tggtactggattggtgctgg 33002
>emb|BX649279.7| Zebrafish DNA sequence from clone CH211-212D10 in linkage group 22, complete sequence Length = 124384 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gacatatacgttgccgtcat 136 |||||||||||||||||||| Sbjct: 45214 gacatatacgttgccgtcat 45195
>emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, complete sequence Length = 183864 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 gtttcaaggaaccacttgga 522 |||||||||||||||||||| Sbjct: 162633 gtttcaaggaaccacttgga 162652
>emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chromosome 4, complete sequence Length = 209864 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 ttcaaggaaccacttggaag 524 |||||||||||||||||||| Sbjct: 198055 ttcaaggaaccacttggaag 198074
>dbj|AB010408.1| Arabidopsis thaliana DNA for phosphoserine aminotransferase, complete cds Length = 6124 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgggattttgatgattat 29 |||||||||||||||||||| Sbjct: 2430 tttgggattttgatgattat 2449
>dbj|AB075550.1| Nicotiana tabacum NtPDR1 mRNA for pleiotropic drug resistance like protein, complete cds Length = 4674 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 taacatactatggcattggatttgatcc 215 |||||||||| | ||||||||||||||| Sbjct: 2092 taacatactacgtcattggatttgatcc 2119 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,137,716 Number of Sequences: 3902068 Number of extensions: 6137716 Number of successful extensions: 122469 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122018 Number of HSP's gapped (non-prelim): 442 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
