ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal14c10 |
|---|---|
| Clone Library Name | barley_pub |
>OCLN_CANFA (Q28269) Occludin| Length = 521 Score = 35.8 bits (81), Expect = 0.047 Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 22/151 (14%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SSS P P+ GR+ +P++ ++D +ET + +S DE E+ ++ Sbjct: 368 SSSGHLEPPSKRAPSKGRTG---RPKRLEQDHYETDYTTGGESCDEL-----EEDWIREY 419 Query: 224 PPA---------RRLVSEGVYDLSSMKAELSVKKGGLSKY-------------YDGKSQS 337 PP +R G+ + S++AEL LS+ Y + Sbjct: 420 PPITSDQQRQLYKRNFDTGLQEYKSLQAELDEINKELSRLDKELDDYREESEEYMAAADE 479 Query: 338 FACMSEVRCLEDLPKKRPYNKKMKPCRSHVE 430 + + +V+ D KR Y K++K SH++ Sbjct: 480 YNRLKQVKGSPDYKNKRNYCKQLKSKLSHIK 510
>OCLN_PONPY (Q5RFS5) Occludin| Length = 522 Score = 35.0 bits (79), Expect = 0.081 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 12/137 (8%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SSS ++ P PA GR+A + + Q+ + T+ SCD +E D ++ P + Sbjct: 369 SSSGNFETPSKRAPAKGRAAKSKRTEQDHYETDYTTGGESCDELEE----DWIREYPPIT 424 Query: 224 PPARRLVSEGVYD------------LSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCL 367 +R + + +D L + ELS L Y + + A E L Sbjct: 425 SDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRL 484 Query: 368 EDLPKKRPYNKKMKPCR 418 + + Y K C+ Sbjct: 485 KQVKGSADYKSKKNHCK 501
>CAR11_HUMAN (Q9BXL7) Caspase recruitment domain-containing protein 11| (CARD-containing MAGUK protein 3) (Carma 1) Length = 1147 Score = 34.7 bits (78), Expect = 0.11 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Frame = +2 Query: 8 NSKXKEYITSIDSSSLSYRKPRNLQPAM-GRSAGAPQPRQEDEDLFETSSSFSCDSDDEA 184 N + K S DS++L PRNL + + G PR ++ ++S+S D + Sbjct: 423 NLESKLRRLSKDSNNLDQSLPRNLPVTIISQDFGDASPRTNGQEADDSSTSEESPEDSK- 481 Query: 185 RFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKK 298 F+P PP RR+ +G+ L K+ +S+K+ Sbjct: 482 -------YFLPYHPPQRRMNLKGI-QLQRAKSPISLKR 511
>VE2_RHPV1 (P22156) Regulatory protein E2| Length = 366 Score = 33.1 bits (74), Expect = 0.31 Identities = 20/68 (29%), Positives = 27/68 (39%) Frame = +2 Query: 149 SSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGK 328 SS+ CD G P+ PPA E V+ + + S G + DGK Sbjct: 207 SSATHCDKLPTVEIVSGLQHINPSPPPANPSAKENVWSSPAKRVRRSDSGGDPVRALDGK 266 Query: 329 SQSFACMS 352 S+S C S Sbjct: 267 SRSVLCGS 274
>VE1_HPV09 (Q05111) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 605 Score = 32.0 bits (71), Expect = 0.68 Identities = 21/89 (23%), Positives = 42/89 (47%) Frame = +2 Query: 77 LQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGV 256 L P + + +PQ + + LFE S C ++ S+ + + VPA+PP ++G+ Sbjct: 92 LSPQLESISLSPQHKPKRR-LFEQDSGLECSVNEAEDLSETQVEEVPANPPTTAQGTKGL 150 Query: 257 YDLSSMKAELSVKKGGLSKYYDGKSQSFA 343 + + +VK ++K+ + FA Sbjct: 151 GIVKDLLKHSNVKAVLMAKFKEAFGVGFA 179
>OCLN_HUMAN (Q16625) Occludin| Length = 522 Score = 32.0 bits (71), Expect = 0.68 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 12/137 (8%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SS ++ P PA GR+ + + Q+ + T+ SCD +E D ++ P + Sbjct: 369 SSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEE----DWIREYPPIT 424 Query: 224 PPARRLVSEGVYD------------LSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCL 367 +R + + +D L + ELS L Y + + A E L Sbjct: 425 SDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRL 484 Query: 368 EDLPKKRPYNKKMKPCR 418 + + Y K C+ Sbjct: 485 KQVKGSADYKSKKNHCK 501
>HTF4_MOUSE (Q61286) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Class A helix-loop-helix transcription factor ME1) Length = 706 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P N + + +G+ P +++DE+L E SS Sbjct: 501 NGNHSVLSSTVAASNTELNHKTPENFRGGVQNQSGSVVPTEIKTENKEKDENLHEPPSSD 560 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 561 DMKSDDESSQKD 572
>IKBB_HUMAN (Q15653) NF-kappa-B inhibitor beta (NF-kappa-BIB) (I-kappa-B-beta)| (IkappaBbeta) (IKB-beta) (IKB-B) (Thyroid receptor-interacting protein 9) (TR-interacting protein 9) Length = 356 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRL 241 +P + + R+ GAP+P EDE SSS DS DE + +D V +S RL Sbjct: 284 RPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEG--DEYDDIVVHSSRSQTRL 340
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 30.8 bits (68), Expect = 1.5 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 2/131 (1%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAG--APQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 +S SSS S + P A + AG AP + +SSS S S FS + Sbjct: 1183 SSSSSSSDSSKSPHKHGGAKRQHAGHGAPHLGPQSHSSSSSSSSSSSSSSASKSFSTVKP 1242 Query: 206 QFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCLEDLPKK 385 PAR S D SS + S S S+S + E ++D+ + Sbjct: 1243 PMTRKPRPARSSSSSSSSDSSSSSSSSSSSSSSSSSSSSSSSESKSL--EWLAVKDVNQS 1300 Query: 386 RPYNKKMKPCR 418 YN K P R Sbjct: 1301 AFYNFKYVPQR 1311
>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB) Length = 853 Score = 30.8 bits (68), Expect = 1.5 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = +2 Query: 38 IDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVP 217 +D S + + R+L+ SAG P P SS + D D+ + G Q Sbjct: 133 VDESPVEFPATRSLRRRATASAGTPWPS-------PPSSYLTIDLTDDTEDTHGTPQ--S 183 Query: 218 ASPPARRLVSEGVY-DLSSMKAELSVKKGGLSKYYDGK 328 +S P RL + + S + E G S+Y DGK Sbjct: 184 SSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGK 221
>IKBB_MOUSE (Q60778) NF-kappa-B inhibitor beta (NF-kappa-BIB) (I-kappa-B-beta)| (IkappaBbeta) (IKB-beta) (IKB-B) Length = 359 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEAR 187 +P + + R+ GAP+P ED+ L SSS S DSD + R Sbjct: 284 RPNPILARLLRAHGAPEPEDEDDKLSPCSSSGS-DSDSDNR 323
>CELR1_MOUSE (O35161) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| Length = 3034 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +2 Query: 68 PRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPA 232 PRN + A G + + DE +SS + DS+D+ + ED++ PA PA Sbjct: 2809 PRNSKKAHGPDSDSDSELSLDEHSSSYASSHTSDSEDDG--GEAEDKWNPAGGPA 2861
>PEA3_BRARE (Q9PUQ1) ETS domain-containing transcription factor PEA3| Length = 494 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 107 APQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVP 217 A P QE EDLF+ S EA+ D ++QFVP Sbjct: 41 AELPPQESEDLFQDLSQLQETWLTEAQVPDSDEQFVP 77
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Frame = +2 Query: 5 SNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSA--------GAPQPRQEDEDLFETSSSF 160 S+++ + ITS + + +P + G S+ G+ P+ D+D TS S Sbjct: 656 SDTEDTDRITSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSI 715 Query: 161 SCDSDDEA-RFSDGEDQFVPASPPA 232 D+E+ S + Q + A PPA Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPA 740
>ENO_STAAW (P64079) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAU (O69174) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) (Laminin-binding protein) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSQRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAS (Q6GB54) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAR (Q6GIL4) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAN (P99088) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAM (P64078) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAC (Q5HHP1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>HTF4_MESAU (Q60420) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Beta-cell E-box transcriptional activator 1) (BETA1) (Fragment) Length = 437 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P N + + +G P +++DE+L E SS Sbjct: 232 NGNHSVLSSTVAASNTDLNHKTPENYRGGLQNQSGNVVPTEIKTENKEKDENLHEPPSSD 291 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 292 DMKSDDESSQKD 303
>ENO_STAES (Q8CPY3) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.0 bits (66), Expect = 2.6 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = +2 Query: 71 RNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSE 250 R L+ A+G G + ED ET + ++A + GED F+ + Sbjct: 198 RGLETAVGDEGGFAPRFEGTEDAVETIIK----AIEKAGYKPGEDVFLGFDCASSEFYEN 253 Query: 251 GVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 254 GVYDYTKFEGEHGAKR 269
>ENO_STAEQ (Q5HQV0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.0 bits (66), Expect = 2.6 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = +2 Query: 71 RNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSE 250 R L+ A+G G + ED ET + ++A + GED F+ + Sbjct: 198 RGLETAVGDEGGFAPRFEGTEDAVETIIK----AIEKAGYKPGEDVFLGFDCASSEFYEN 253 Query: 251 GVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 254 GVYDYTKFEGEHGAKR 269
>WRIP1_RAT (Q8CG07) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +2 Query: 47 SSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 SS RK +PA +AG+ PR DE + D D +A DGED Sbjct: 131 SSSPARKGLGKRPAAAAAAGSASPRSWDETEAQEEEEAGVDGDGDADV-DGED 182
>WRIP1_MOUSE (Q91XU0) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +2 Query: 47 SSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 SS RK +PA +AG+ PR DE + D D +A DGED Sbjct: 131 SSSPARKGMGKRPAAAAAAGSASPRSWDEAEAQEEEEAGVDGDGDADV-DGED 182
>CAPP_VIBF1 (Q5E2E3) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 876 Score = 29.6 bits (65), Expect = 3.4 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 644 PEPKQEWRDLMEVLSEVSCEA--YRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRN 701 Query: 290 VKKG 301 G Sbjct: 702 PNGG 705
>PRM2_PIG (P19757) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 92 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 183 HGSRTARTSSCRPPRRRAGWFQRASTICRR*RQSSPSRK 299 H S T R SCR RRRA +R CRR R+ R+ Sbjct: 52 HRSHTRRRRSCRRRRRRACRHRRHRRGCRRIRRRRRCRR 90
>HTF4_RAT (P51514) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (Salivary-specific cAMP response element-binding protein alpha) (SCBP alpha) (DNA-binding protein HTF4) Length = 707 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P + + + +G+ P +++DE+L E SS Sbjct: 502 NGNHSVLSSTVAASNTELNHKTPESFRGGVQNQSGSVVPTEIKTENKEKDENLHEPPSSD 561 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 562 DMKSDDESSQKD 573
>COAT_CERV (P05399) Probable coat protein| Length = 494 Score = 29.3 bits (64), Expect = 4.4 Identities = 31/124 (25%), Positives = 51/124 (41%) Frame = +2 Query: 41 DSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPA 220 D S Y+ P+N P++ + A P ++ S F ++ +S G Sbjct: 272 DYESNLYKLPQNEYPSLVKQYLAKIPIVGEK----ASKRFEEEASAATSYSLGF------ 321 Query: 221 SPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCLEDLPKKRPYNK 400 A +LV+E + + ELS K+ L ++ +F E C KK+ Y+K Sbjct: 322 ---AHKLVNEELAKI----CELSKKQKKLKRFNKNCCSTFEKPYEYGCKPSYSKKKKYSK 374 Query: 401 KMKP 412 K KP Sbjct: 375 KYKP 378
>ENO_STRMU (Q8DTS9) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 432 Score = 29.3 bits (64), Expect = 4.4 Identities = 20/78 (25%), Positives = 31/78 (39%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLV 244 K R L+ A+G G ED ET + + A + GE+ F+ + Sbjct: 194 KERGLETAVGDEGGFAPKFDGTEDAVETIIK----AIETAGYKPGEEVFLGFDCASSEFY 249 Query: 245 SEGVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 250 DNGVYDYTKFEGEKGAKR 267
>CAPP_VIBVY (Q7MH68) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 645 PEPKQEWRDLMEVLSQVSCEA--YRSVVRGEPDFVPYFRQATPELELGKLPLGSRPAKRN 702 Query: 290 VKKG 301 G Sbjct: 703 PNGG 706
>CAPP_VIBVU (Q8DCN2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 645 PEPKQEWRDLMEVLSQVSCEA--YRSVVRGEPDFVPYFRQATPELELGKLPLGSRPAKRN 702 Query: 290 VKKG 301 G Sbjct: 703 PNGG 706
>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:| Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2 (LV2)] Length = 1704 Score = 28.9 bits (63), Expect = 5.8 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 4/139 (2%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPA----MGRSAGAPQPRQEDEDLFETSSSFSCD 169 +S+S S SSS S R R + A S+ + + R +SSS S Sbjct: 1089 SSSSSESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSSSSSSSSS 1148 Query: 170 SDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACM 349 S R S +S + R V+ SS + + L+ ++ S S + Sbjct: 1149 SSSSRRSSSSSSSSSSSSSRSSRRVNS---TRSSSSSSRTSSASSLASFFSDSSSS-SSS 1204 Query: 350 SEVRCLEDLPKKRPYNKKM 406 S+ R E + K + +KKM Sbjct: 1205 SDRRSKEVMEKFQRLHKKM 1223
>CAPP_VIBPA (Q87L54) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 645 PEPKQEWRDLMEVLSEVSCEA--YRGVVRGEPDFVPYFRQATPELELGKLPLGSRPAKRN 702 Query: 290 VKKG 301 G Sbjct: 703 PNGG 706
>GLU2B_BOVIN (Q28034) Glucosidase 2 beta subunit precursor (Glucosidase II beta| subunit) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein) (Vacuolar system-associated protein 60) (VASAP-60) Length = 533 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/56 (37%), Positives = 25/56 (44%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPA 232 +P+ QP M P P E+ED E D D+E S GE Q A PPA Sbjct: 299 EPKEEQPPM------PSPPTEEEDEDEEDEETEEDEDEEDEDSQGE-QPKDAPPPA 347
>MNB1B_MAIZE (P27347) DNA-binding protein MNB1B (HMG1-like protein)| Length = 157 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Frame = +2 Query: 5 SNSKXKEYITSIDSSSLSYRKP----RNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDS 172 S S Y+ + L Y K + + A A + +EDE+ + S S D Sbjct: 84 SESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVNDE 143 Query: 173 DDEARFSDGED 205 DDE + ED Sbjct: 144 DDEEGSEEDED 154
>HMGL_WHEAT (P40621) HMG1/2-like protein| Length = 161 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 56 SYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 +Y K + A + A A + +EDE+ + S S D DD+ + ED Sbjct: 109 AYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEINDDDDDEGSDEDED 158
>UBP20_HUMAN (Q9Y2K6) Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15)| (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20) Length = 913 Score = 28.5 bits (62), Expect = 7.6 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Frame = +2 Query: 5 SNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCD----S 172 +NS+ + +D++ + +P QP RS+ + + D D SSS C Sbjct: 339 TNSEQVDEDADVDTAMAALDQPAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHH 398 Query: 173 DDEARFSDGEDQFVPA-SPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACM 349 + A+ S + P P+ L V S + + + +S +DG + + Sbjct: 399 EGHAKLSSSPPRASPVRMAPSYVLKKAQVLSAGSRRRKEQRYRSVISDIFDG-----SIL 453 Query: 350 SEVRCL 367 S V+CL Sbjct: 454 SLVQCL 459
>ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus enhancer| activator 3) (PEA3 protein) Length = 555 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 116 PRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVP 217 P + EDLF+ S F EA+ D ++QFVP Sbjct: 121 PPSDSEDLFQDLSHFQETWLAEAQVPDSDEQFVP 154
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYR-KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDD 178 N S ++ +T I + + S +P N+ + S +P+ D + E + S + DS++ Sbjct: 51 NETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELHRPKDSDSESEEHAESPASDSEN 110 Query: 179 EARFSDGED 205 EA G D Sbjct: 111 EAVHQQGSD 119
>SPL3_ARATH (P93015) Squamosa promoter-binding-like protein 3| Length = 131 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +2 Query: 305 LSKYYDGKSQSFACMSEVR-CLEDLPKKRPYNKKMKPCRSHVE 430 L K GK+ S + + +V C D+ K + Y+K+ K C+ H + Sbjct: 39 LEKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAK 81
>TACC1_HUMAN (O75410) Transforming acidic coiled-coil-containing protein 1| (Taxin 1) (Gastric cancer antigen Ga55) Length = 805 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Frame = +2 Query: 101 AGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASP------PARRLVSEGVYD 262 AG P+ E+ED + S S SD E F E + SP P+ L G Sbjct: 32 AGGPEGDPEEEDSQAETKSLSFSSDSEGNFETPEAETPIRSPFKESCDPSLGLAGPGAKS 91 Query: 263 LSSMKAE 283 S +A+ Sbjct: 92 QESQEAD 98
>ICA69_RAT (Q63054) Islet cell autoantigen 1 (69 kDa islet cell autoantigen)| (ICA69) (p69) (Islet cell autoantigen p69) (ICAp69) Length = 480 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = +2 Query: 80 QPAMGRSAGAPQPRQED-EDLFETSSSFSCDSDDEARFS 193 + +G AG P+P D +DL + FS S DE FS Sbjct: 350 EACLGPMAGTPEPESGDKDDLLLLNEIFSTSSLDEGEFS 388
>CR1AG_BACTU (Q9S515) Pesticidal crystal protein cry1Ag (Insecticidal| delta-endotoxin CryIA(g)) (Crystaline entomocidal protoxin) (134 kDa crystal protein) Length = 1176 Score = 28.1 bits (61), Expect = 9.9 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Frame = +2 Query: 23 EYITSIDSSSLSY-------RKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDE 181 +++TSID ++ NLQ R+ G P F S+ S + Sbjct: 535 QFLTSIDGRPINQGNFYATMSSGSNLQSGSFRTVGFTTP-------FNFSNGSSVFTLSA 587 Query: 182 ARFSDGED------QFVPASPPAR-----RLVSEGVYDLSSMKAELSVKKGGLSKYYDGK 328 F+ G + +FVPA GV L + ++ +K G + D Sbjct: 588 HVFNSGNEVYIDRIEFVPAEVTFEAEYDLERAQNGVNQLFTSSNQIGLKTDGTDYHIDQV 647 Query: 329 SQSFACMSEVRCLEDLPKKRPYNKKMK 409 S C+S+ CL++ K+ ++K+K Sbjct: 648 SNLVECLSDEFCLDE---KQELSEKVK 671
>TCI1_RHIBU (Q5EPH2) Carboxypeptidase inhibitor precursor (TCI)| Length = 97 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 Query: 122 GAAEELRQICPWLVASSSASGKTMSCCLWM 33 G L + C L A S++ GK CC+W+ Sbjct: 67 GECNPLDRQCKELQAESASCGKGQKCCVWL 96
>IE63_HHV1E (P36295) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 511 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDE----ARFSDGEDQFVPASPPARR 238 P+P + D E+ SS C S DE DG + + A+ PA R Sbjct: 25 PEPAESRRDDLESDSSGECSSSDEDMEDPHGEDGPEPILDAARPAVR 71
>WRN_XENLA (O93530) Werner syndrome ATP-dependent helicase homolog (EC| 3.6.1.-) (Focus forming activity 1) (FFA-1) Length = 1436 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = +2 Query: 236 RLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSE----VRCLEDLPKK 385 R+ EGV D +K +L+ GL + SF C +E V LEDL +K Sbjct: 233 RVGREGVADCKGVKRQLTDLSKGLMDLVNQVPNSFGCYTEAVRAVDILEDLSEK 286
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDE----ARFSDGEDQFVPASPPARR 238 P+P + D E+ SS C S DE DG + + A+ PA R Sbjct: 25 PEPAESRRDDLESDSSGECSSSDEDMEDPHGEDGPEPILDAARPAVR 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,332,728 Number of Sequences: 219361 Number of extensions: 791592 Number of successful extensions: 2466 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2363 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2458 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
