ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13n04 |
|---|---|
| Clone Library Name | barley_pub |
>DPNPH_ARATH (Q38945) PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate| nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) (Halotolerance protein) Length = 373 Score = 120 bits (301), Expect = 8e-28 Identities = 67/132 (50%), Positives = 90/132 (68%) Frame = +3 Query: 12 EMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQATVS 191 E++ AVRVV +A +LC +VQ+ L L + V SK D SPVTVAD+GVQA VS Sbjct: 9 EIDTAVRVVHLASSLCVKVQEKLHLPN--------GGHVKSKDDDSPVTVADFGVQAIVS 60 Query: 192 WLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKDLGA 371 W+L++ FGD+++SIVAEED +TLS +D LL +V AVN L EA YGL P K LG+ Sbjct: 61 WVLAEVFGDQNLSIVAEEDTETLSEADSLGLLGAVSNAVNEALSEAQNYGLPKPVKPLGS 120 Query: 372 HDVLQAIRKCSS 407 ++L+AI +C+S Sbjct: 121 SEILKAISRCNS 132
>DPNP1_ARATH (Q42546) SAL1 phosphatase (3'(2'),5'-bisphosphate nucleotidase 1)| (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 1) (DPNPase 1) (Inositol-1,4-bisphosphate 1-phosphatase 1) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphat Length = 353 Score = 73.9 bits (180), Expect = 8e-14 Identities = 49/130 (37%), Positives = 64/130 (49%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 Y KE++AA + +A LCQ+VQ +LL +D V SK D+SPVTVAD+G QA Sbjct: 3 YEKELDAAKKAASLAARLCQKVQKALLQSD-----------VQSKSDKSPVTVADYGSQA 51 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 VS +L E S+VAEED L LE + VN L + Sbjct: 52 VVSLVLEKELSSEPFSLVAEEDSGDLRKDGSQDTLERITKLVNDTLATEESFN----GST 107 Query: 363 LGAHDVLQAI 392 L D+L+AI Sbjct: 108 LSTDDLLRAI 117
>DPNP4_ARATH (Q84VY5) Probable SAL4 phosphatase (3'(2'),5'-bisphosphate| nucleotidase 4) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase 4) (EC 3.1.3.57) (Inositol polyphosphate 1 Length = 345 Score = 69.3 bits (168), Expect = 2e-12 Identities = 48/130 (36%), Positives = 63/130 (48%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 Y KE+ AA + V +A L Q VQ SLL +D V SK D+SPVT AD+G QA Sbjct: 3 YEKELAAAKKAVSLAARLSQEVQKSLLQSD-----------VRSKSDKSPVTAADYGSQA 51 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 +S +L E + +VAEE+ + L + LES+ VN L Y Sbjct: 52 VISHVLERELHPEPLYLVAEENAEDLHKNGAEEFLESITKLVNNALASDDSYA----NSS 107 Query: 363 LGAHDVLQAI 392 L DV +AI Sbjct: 108 LSMDDVRKAI 117
>DPNP_ORYSA (Q40639) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)| (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) Length = 358 Score = 66.6 bits (161), Expect = 1e-11 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 YA E+ AA + V +A LCQ VQ +L + V SK D+SPVTVAD+G Q Sbjct: 9 YAAELAAAKKAVTLAARLCQAVQKDILQSG-----------VQSKADQSPVTVADYGSQI 57 Query: 183 TVSWLLS-DCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGL 344 VS +L + S S+VAEED + L +LE++ VN +V+ Y + Sbjct: 58 LVSLVLKMEAPASSSFSMVAEEDSEELRKEGAEEILENITELVNETIVDDGTYSI 112
>DPNP3_ARATH (Q8GY63) Probable SAL3 phosphatase (3'(2'),5'-bisphosphate| nucleotidase 3) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase 3) (EC 3.1.3.57) (Inositol polyphosphate 1 Length = 357 Score = 65.9 bits (159), Expect = 2e-11 Identities = 49/135 (36%), Positives = 65/135 (48%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 Y + + AA + V +A L V+ SLL+ D V +K D SPVTVAD+G QA Sbjct: 3 YDEMLSAAKKAVSLAARLSNEVRKSLLVTD-----------VWNKSDDSPVTVADYGSQA 51 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 VS +L +E VS+VAEED L +L + V L Y + SP Sbjct: 52 VVSLVLERELQNEPVSLVAEEDSGELRKIAAETVLARITELVKDTLASDESYAIASP--- 108 Query: 363 LGAHDVLQAIRKCSS 407 L + DVL AI + S Sbjct: 109 LTSDDVLNAIDRGKS 123
>DPNP2_ARATH (O49623) SAL2 phosphatase (3'(2'),5'-bisphosphate nucleotidase 2)| (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 2) (DPNPase 2) (Inositol-1,4-bisphosphate 1-phosphatase 2) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphat Length = 347 Score = 65.1 bits (157), Expect = 4e-11 Identities = 47/130 (36%), Positives = 60/130 (46%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 Y KE+ AA + V +A L Q VQ +LL + V K DRSPVT AD+G QA Sbjct: 3 YEKELAAAKKAVTLAARLSQEVQKTLLQSQ-----------VWKKSDRSPVTAADYGSQA 51 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 VS +L + +S+VAEE+ L + A LE + V L Y Sbjct: 52 VVSLVLERELQPDKLSLVAEEETGDLRKNGSEAFLEDIAKLVKDTLASEESY----TSSP 107 Query: 363 LGAHDVLQAI 392 L DVL AI Sbjct: 108 LSTDDVLNAI 117
>DPNPM_ARATH (Q9M0Y6) Putative PAP-specific phosphatase, mitochondrial precursor| (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) Length = 397 Score = 57.0 bits (136), Expect = 1e-08 Identities = 47/130 (36%), Positives = 65/130 (50%) Frame = +3 Query: 3 YAKEMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQA 182 Y KE+E A+ V AC LC V+ SL + K D++PVT+AD+GVQA Sbjct: 46 YHKELEVAIDAVDRACRLCVDVKRSLF---------SSKEKIVEKNDQTPVTIADFGVQA 96 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 VS LS F S+ +VAEED + +++ L+ SVV+ V K + Sbjct: 97 LVSLELSKLF--PSIPLVAEEDSHFVRANN---LVSSVVSEV--------KSKASIGDNH 143 Query: 363 LGAHDVLQAI 392 L DVL+AI Sbjct: 144 LSDADVLEAI 153
>DPNP_SCHPO (O94505) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)| (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) (Halotolerance protein tol1) (Target of lithium protein 1) Length = 353 Score = 38.9 bits (89), Expect = 0.003 Identities = 28/89 (31%), Positives = 43/89 (48%) Frame = +3 Query: 12 EMEAAVRVVQVACTLCQRVQDSLLLADPXXXXXXXXXXVHSKLDRSPVTVADWGVQATVS 191 E + A+ V+ A L ++V + L+ +K D+SPVT+ D+G QA V Sbjct: 6 EKQLAIAAVRRASYLTEKVFNQLIKEKSAAGAL-------TKDDKSPVTIGDFGAQAIVI 58 Query: 192 WLLSDCFGDESVSIVAEEDDKTLSSSDGT 278 +L D F ++ IV EED L + T Sbjct: 59 SMLKDAFPND--PIVGEEDSDFLRENTQT 85
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 13/123 (10%) Frame = -1 Query: 346 LSPYFGASTRQPLTAA------TTDSSKAVPXXXXXXXXX---XXXXXXXXXSPKQSESS 194 +SP +++ PLT A +TD + A+P + S S+ Sbjct: 150 ISPTLTSTSTTPLTTASTSTTPSTDITSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSST 209 Query: 193 QLTVACTPQSATVTGERS----SLEWTXXXXXXXXXPGSARRSESCTRWQSVQATCTTRT 26 TV+ T ++T T S S + SA S S T S + T+ T Sbjct: 210 STTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTTSPT 269 Query: 25 AAS 17 ++S Sbjct: 270 SSS 272
>GLYA_STRR6 (Q8DPZ0) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3 Query: 171 GVQATVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKY 338 G++ + + + FG+E VAE KTL +S+ A+LE V +AV P Y Sbjct: 361 GIRIGAAAITARGFGEEESRKVAELIIKTLKNSENEAVLEEVRSAVKELTDAFPLY 416
>GLYA_STRPN (Q97R16) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3 Query: 171 GVQATVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKY 338 G++ + + + FG+E VAE KTL +S+ A+LE V +AV P Y Sbjct: 361 GIRIGAAAITARGFGEEESRKVAELIIKTLKNSENEAVLEEVRSAVKELTDAFPLY 416
>FTHS_LACLA (Q9CH07) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSDCFGDESVSIV 236 DR PVT+ D GVQ ++ LL D V + Sbjct: 229 DRKPVTLGDLGVQGAIAMLLKDALKPNLVQTI 260
>BFR2_SCHPO (Q9US05) Protein bfr2| Length = 452 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Frame = +3 Query: 126 VHSKLDR--SPVTVADWGVQATVSWL---------LSDCFGDESVSIVAEEDDKTLSSSD 272 VH KL +P+ V W + T LS+ D + S E+DD+ +SS+D Sbjct: 387 VHDKLQNFMAPIEVTVWPDEQTEDLFSSLLGQQLDLSETANDTNTSNFVEKDDELISSND 446 Query: 273 GTAL 284 G +L Sbjct: 447 GFSL 450
>RL9_RHOCA (O68128) 50S ribosomal protein L9| Length = 222 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Frame = +3 Query: 261 SSSDGTALLESVV-------AAVNGCLVEAPKYGLRSPEKDLGAHDV 380 S+SD AL SV A G V+ + L++P K+LG HDV Sbjct: 82 SASDAGALYGSVTPRDAAEAATAGGFSVDKRQVALKAPIKELGLHDV 128
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Frame = -1 Query: 325 STRQPLTAATTDSSKA-VPXXXXXXXXX-----XXXXXXXXXSPKQSESSQLTVACTPQS 164 S+ P+T++TT+SS A VP +P S +++ + A P Sbjct: 339 SSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 398 Query: 163 ATVTGERSSLEWTXXXXXXXXXPGSARRSESCTRWQSVQATCTTRTAAS 17 ++ T E SS T SA + S T S T +T ++S Sbjct: 399 SSSTTESSSAPVT----SSTTESSSAPVTSSTTESSSAPVTSSTTESSS 443 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 1/104 (0%) Frame = -1 Query: 325 STRQPLTAATTDSSKA-VPXXXXXXXXXXXXXXXXXXSPKQSESSQLTVACTPQSATVTG 149 S+ P+T++TT+SS A VP +ESS V TP S+T Sbjct: 537 SSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSST----TESSSAPVP-TPSSSTTES 591 Query: 148 ERSSLEWTXXXXXXXXXPGSARRSESCTRWQSVQATCTTRTAAS 17 + + + S S T S T +T ++S Sbjct: 592 SSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSS 635 Score = 27.3 bits (59), Expect = 8.8 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 6/129 (4%) Frame = -1 Query: 379 TS*APRSFSGDLSPYFGASTRQPLTAATTDSSKA-VPXXXXXXXXX-----XXXXXXXXX 218 TS S S ++ S+ P+T++TT+SS A VP Sbjct: 423 TSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSS 482 Query: 217 SPKQSESSQLTVACTPQSATVTGERSSLEWTXXXXXXXXXPGSARRSESCTRWQSVQATC 38 +P + SS T + + + T E SS + + S + +S A Sbjct: 483 APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPV 542 Query: 37 TTRTAASIS 11 T+ T S S Sbjct: 543 TSSTTESSS 551
>RUVA_NEIMA (Q9JSM5) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 194 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTA--LLESVVAAVNGCLV 323 T +LS DE VAEED K LSS+ G E +V + G LV Sbjct: 85 TALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLV 133
>YGCG_ECOLI (P55140) Hypothetical protein ygcG| Length = 313 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/58 (24%), Positives = 27/58 (46%) Frame = +3 Query: 156 TVADWGVQATVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEA 329 T+ + + +W L D ++ + IV D+T+ G L E V A+ G ++ + Sbjct: 94 TIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRS 151
>FTHS_LACPL (Q88W76) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 551 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSDCFGDESVSIVA 239 DR PVTVAD V ++ LL D V +A Sbjct: 225 DRQPVTVADLNVGGAITLLLKDALRPNLVQTLA 257
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +3 Query: 177 QATVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPE 356 QA V ++C G E +S + LS D T L+S+ A LV PK SP+ Sbjct: 567 QACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPD 626
>RUVA_NEIMB (Q9K1A2) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 194 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTA--LLESVVAAVNGCLV 323 T +LS DE VAEED K LSS+ G E +V + G LV Sbjct: 85 TALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLV 133
>RUVA_NEIG1 (Q5F636) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 194 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 183 TVSWLLSDCFGDESVSIVAEEDDKTLSSSDGTA--LLESVVAAVNGCLV 323 T +LS DE VAEED K LSS+ G E +V + G LV Sbjct: 85 TALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLV 133
>ISPDF_DESVH (Q72C30) IspD/ispF bifunctional enzyme [Includes:| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT); 2-C-methyl-D-erythritol 2,4-cyclod Length = 395 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 231 IVAEEDDKTLSSSDGTALLESVVAAVNGCLVEAPKYGLRSPEKD 362 ++ E + ++ SDG LL ++ A+ GC + A GL P+ D Sbjct: 259 VLIPEGPEVVAHSDGDVLLHALADALLGC-IGAGDIGLHFPDSD 301
>FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSD 206 DR PVTVAD VQ ++ +L D Sbjct: 229 DRKPVTVADLKVQGALAMILKD 250
>FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSD 206 DR PVTVAD VQ ++ +L D Sbjct: 229 DRKPVTVADLKVQGALAMILKD 250
>FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSD 206 DR PVTVAD VQ ++ +L D Sbjct: 229 DRKPVTVADLKVQGALAMILKD 250
>FTHS_STAAN (Q7A535) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSD 206 DR PVTVAD VQ ++ +L D Sbjct: 229 DRKPVTVADLKVQGALAMILKD 250
>FTHS_STAAM (Q99TD2) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 141 DRSPVTVADWGVQATVSWLLSD 206 DR PVTVAD VQ ++ +L D Sbjct: 229 DRKPVTVADLKVQGALAMILKD 250 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,897,392 Number of Sequences: 219361 Number of extensions: 631495 Number of successful extensions: 1726 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1692 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1717 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
