>BCHH_RHOS4 (Q9RFD5) Magnesium-chelatase subunit H (EC 6.6.1.1)|
            (Mg-protoporphyrin IX chelatase subunit H)
          Length = 1193

 Score =  108 bits (269), Expect = 1e-23
 Identities = 60/160 (37%), Positives = 88/160 (55%)
 Frame = +2

Query: 8    LLDRAVKMVAELEEPIEMNYVRKHAMEQAEELGVSVREAATRIFSNASGSYSSNVNLAVE 187
            L + A K      EP+  N++R HA+  A+E+GV +  A+ R+FSNA G+Y SNVN+ V 
Sbjct: 914  LAEAAWKAANAEGEPLAQNFIRAHALSYAQEMGVDMETASLRVFSNAEGAYGSNVNVLVG 973

Query: 188  NASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEISLT 367
            ++++ +E +L D Y +RKSFA+      V   +     + +L T D  +QNL+S E+ +T
Sbjct: 974  SSAFGEEDELADAYEARKSFAYGRSGKPV---QNAALLQKSLKTVDVAYQNLESVELGVT 1030

Query: 368  DVSHYFDSDPTKLVQGLRKDGRAPSSYIADTTTANAQVRT 487
             V HYFD+         R  G   S YI D T     VRT
Sbjct: 1031 TVDHYFDTLGGIARAVKRARGEEASVYIGDQTRGGGTVRT 1070

>BCHH_RHOCA (P26162) Magnesium-chelatase subunit H (EC 6.6.1.1)|
            (Mg-protoporphyrin IX chelatase subunit H)
          Length = 1194

 Score = 98.6 bits (244), Expect = 8e-21
 Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
 Frame = +2

Query: 8    LLDRAVKMVAELE-EPIEMNYVRKHAMEQAEELGVSVREAATRIFSNASGSYSSNVNLAV 184
            LL  A  + A  E EP+  N++R + +   ++ G+    A+ R+FSNA G+Y SNVN  V
Sbjct: 913  LLAEAAYLCASAENEPLAQNFIRANVLATMQDTGMDFETASLRVFSNAEGAYGSNVNTLV 972

Query: 185  ENASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEISL 364
             +A + DE +L D Y +RKSFA+  D       ++    +  L+  D  +QNL+S E+ +
Sbjct: 973  GSAGFGDEDELADAYEARKSFAYGRDGKST---KQVNLLQNVLSKVDLAYQNLESVELGV 1029

Query: 365  TDVSHYFD-----SDPTKLVQGLRKDGRAPSSYIADTTTANAQVRT 487
            T V HYFD     +  TK  QG    G+    YI D T     VRT
Sbjct: 1030 TTVDHYFDTLGGIARATKRAQG----GKETPVYIGDQTRGAGTVRT 1071

>Y1441_METJA (Q58836) Hypothetical protein MJ1441|
          Length = 1226

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
 Frame = +2

Query: 2    MNLLDRAVKMVAELEEPIEMNYVRKHAMEQAEELGVSVREAATRIFSNASGSYSSNVNLA 181
            + L+D A+  VA L+EP+EMN+V+KH +E   + G+S RE+  RIF +  G+Y + V  A
Sbjct: 918  IELVDEAIMKVANLDEPLEMNFVKKHVVENLNK-GLSFRESTFRIFCSPPGTYGNGVKYA 976

Query: 182  VENASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEIS 361
            V  ++W +++ L+D ++   S+A+  D  G   +     FE  L T D TF  + + E  
Sbjct: 977  VYASAWENDEDLKDAFIYWNSYAYGKDVYGKKAI---NAFENILKTVDLTFNKVVTDEYD 1033

Query: 362  LTDVSHYFDSDPTKLVQGLRKDGRAPSSYIADTTTA-NAQVRT 487
            L     YF +            G    +Y  DT    N +VRT
Sbjct: 1034 LFGCCCYFGTHGGLTNAARVLKGEEVKAYYGDTRNPNNVEVRT 1076

>BCHH_CHLVI (O50314) Magnesium-chelatase subunit H (EC 6.6.1.1)|
            (Mg-protoporphyrin IX chelatase subunit H)
          Length = 1279

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 44/142 (30%), Positives = 79/142 (55%)
 Frame = +2

Query: 2    MNLLDRAVKMVAELEEPIEMNYVRKHAMEQAEELGVSVREAATRIFSNASGSYSSNVNLA 181
            M+ LDR VK  A+ +EP EMN+++KH  E   E G+    A +R F+ A G+Y + V+  
Sbjct: 996  MDQLDRLVKDAAKADEPHEMNFIKKHVDEALAE-GMDFEAATSRQFTQAPGAYGTYVDDM 1054

Query: 182  VENASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEIS 361
            +E+++W +E  L D+++ R S A+     G    ++ +  +  L + D     +DS+E  
Sbjct: 1055 IEDSAWENEGDLDDLFIRRNSSAYGGGRKGE---KQSEILQKLLGSVDRVVHQVDSTEFG 1111

Query: 362  LTDVSHYFDSDPTKLVQGLRKD 427
            ++D+ HYF S  +  +   R++
Sbjct: 1112 ISDIDHYFSSSGSLQLAARRRN 1133

>Y908_METJA (Q58318) Hypothetical protein MJ0908|
          Length = 1232

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
 Frame = +2

Query: 2    MNLLDRAVKMVAELEEPIEMNYVRKHAMEQAEE---LGVSVREAAT----RIFSNASGSY 160
            + L+D A+KMVA L+EP EMNYV+KH  E+ EE    G+  + A      RIFS+  G Y
Sbjct: 945  VELIDEAIKMVANLDEPDEMNYVKKHYREEVEEKIKKGIDEKTAKETSLYRIFSDKPGCY 1004

Query: 161  SSNVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQN 340
             + V+  ++  +W   +    +Y+    +A+     GV   E ++ F   L+  + T +N
Sbjct: 1005 GAGVSHLIDEKNWESIEDFAKVYVEWGGYAYGKGYYGV---EAKEEFINRLSKIELTVKN 1061

Query: 341  LDSSEISLTDVSHYFDSDPTKLVQGLRKDGRAPSSYIADTTTANAQVRT 487
             DS E  + +   +       +       G+ P SY+ DT+  N  +RT
Sbjct: 1062 EDSQEWDIFEGDDFNSYHGGLIASVTYYSGKKPVSYVGDTSNPN-DIRT 1109

>COBN_PSEDE (P29929) Aerobic cobaltochelatase cobN subunit (EC 6.6.1.2)|
            (Hydrogenobyrinic acid a,c-diamide cobaltochelatase cobN
            subunit)
          Length = 1275

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
 Frame = +2

Query: 8    LLDRAVKMVAELEEPIEMNYVRKHAMEQAEEL---GVSVREAATR----IFSNASGSYSS 166
            L D+A++ VA LEE    N +      ++  L   GV   EAA R    +F    G+Y +
Sbjct: 990  LFDKAIRAVA-LEEDDADNMIAARMRAESRRLEAEGVEAAEAARRASYRVFGAKPGAYGA 1048

Query: 167  NVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLD 346
             +   ++   W  +  L + YL+  ++A+ +   G     +R  FE  L T +A  QN D
Sbjct: 1049 ALQALIDEKGWETKADLAEAYLTWGAYAYGAGEEGKA---ERDLFEERLRTIEAVVQNQD 1105

Query: 347  SSEISLTDVSHYFDSDPTKLVQGLRKDGRAPSSYIAD 457
            + E  L D   Y+  +        +  G  P+ Y  D
Sbjct: 1106 NREHDLLDSDDYYQFEGGMSAAAEQLGGHRPAIYHND 1142

>LAMC1_HUMAN (P11047) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1609

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 CSSNSRCHIPEPGLLGDLIDRCQP 378
           C S  RC   +PG++GD  DRCQP
Sbjct: 410 CDSYGRCSC-KPGVMGDKCDRCQP 432

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 CSSNSRCHIPEPGLLGDLIDRCQP 378
           C S  RC   +PG++GD  DRCQP
Sbjct: 408 CDSYGRCSC-KPGVMGDKCDRCQP 430

>NAGZ_BORPE (Q7VWV8) Beta-hexosaminidase (EC 3.2.1.52)|
           (N-acetyl-beta-glucosaminidase)
           (Beta-N-acetylhexosaminidase)
          Length = 352

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = +2

Query: 248 AFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKD 427
           AF  DA  V ML +  T  LALA   A  ++         D  H    DP  L + + KD
Sbjct: 150 AFHHDARVVTMLSRALTQGLALAGMAACGKHFPGHGFVGADSHHEIPVDPRPLAR-ILKD 208

Query: 428 GRAPSSYIAD 457
             AP +++ D
Sbjct: 209 DAAPYAWLGD 218

>SSPO_BOVIN (P98167) SCO-spondin (Fragment)|
          Length = 867

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 317 LLEQAQTSCVSLACLPLEHHCRMQKTCGSGT 225
           L   +Q +C S  CLP+E  C +Q  C  G+
Sbjct: 724 LCSPSQLTCGSGECLPVERRCDLQLDCQDGS 754

>VP23_HCMVA (P16728) Probable capsid protein VP23 (Protein UL85)|
          Length = 306

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 20  AVKMVAELEEPIEMNYVRKHAMEQAEELGVSVREAATRI 136
           ++ MVA L   + M YVRK A+E +  L V  +E   R+
Sbjct: 203 SMSMVANLASELTMTYVRKLALEDSSMLLVKCQELLMRL 241

>INCC1_ECOLI (Q52312) Protein incC|
          Length = 358

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = +2

Query: 188 NASWTDEKQLQDMYLSRKSFAFDSDAPGVGMLEKRKTFELALATADATFQNLDSSEIS 361
           NAS+T     Q  YL+ + F  D+D        KR+   LAL  ADA   NLD  E+S
Sbjct: 147 NASFT-LSAYQSGYLASQLFTGDTDDLRY-WFGKREGESLALIAADANLANLDKMELS 202

>NXF2_DROME (Q9VV73) Nuclear RNA export factor 2|
          Length = 841

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 89  QAEELGVSVREAATRIFSNASGSYSSNVNLAVENASWTDEKQLQ 220
           QAEE  + V++    +F   +G  S+ V   VE A W  E+ L+
Sbjct: 781 QAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFERALK 824

>PTF1A_BRARE (Q7ZSX3) Pancreas transcription factor 1 subunit alpha (Pancreas|
           specific transcription factor 1a) (bHLH transcription
           factor p48)
          Length = 265

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 176 LAVENASWTDEKQLQDMYLSRKSFAFDSDAP 268
           LA  + SWTDEKQL+D  + R +  +  + P
Sbjct: 213 LAGHSLSWTDEKQLKDQNIIRTAKVWTPEDP 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,431,058
Number of Sequences: 219361
Number of extensions: 1170632
Number of successful extensions: 3785
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3778
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)