>THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor|
          Length = 287

 Score =  293 bits (749), Expect(2) = 7e-89
 Identities = 144/156 (92%), Positives = 153/156 (98%)
 Frame = +3

Query: 12  PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 191
           PTVA+TKMNFLKSYKRPI SIYSTVLQELLVQQHLMRYK+TYQYD VFALGFVTVYDQLM
Sbjct: 59  PTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLM 118

Query: 192 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESIL 371
           EGYPSNEDRDAIFK+Y+TALNEDPEQYRADAQ+MEEWARSQNGN LVEFSS+DGEIE+IL
Sbjct: 119 EGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAIL 178

Query: 372 KDISERAQGKGNFSYSRFFAVGLFRLLELSNATEPT 479
           KDISERAQGKG+FSYSRFFAVGLFRLLEL+NATEPT
Sbjct: 179 KDISERAQGKGSFSYSRFFAVGLFRLLELANATEPT 214



 Score = 54.3 bits (129), Expect(2) = 7e-89
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +1

Query: 481 VLDKLCAALNINKKSVDRDLDVYRNLL 561
           +LDKLCAALNINK+SVDRDLDVYRN+L
Sbjct: 215 ILDKLCAALNINKRSVDRDLDVYRNIL 241

>THF1_ARATH (Q9SKT0) Protein THYLAKOID FORMATION1, chloroplast precursor|
          Length = 300

 Score =  250 bits (639), Expect(2) = 2e-76
 Identities = 119/156 (76%), Positives = 141/156 (90%)
 Frame = +3

Query: 12  PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 191
           P V++TK  FLK+YKRPIPSIY+TVLQEL+VQQHLMRYK TY+YDPVFALGFVTVYDQLM
Sbjct: 65  PPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLM 124

Query: 192 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESIL 371
           EGYPS++DRDAIFK+Y+ ALNEDP+QYR DAQ+MEEWARSQ    LV+FSS++G+IE++L
Sbjct: 125 EGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVL 184

Query: 372 KDISERAQGKGNFSYSRFFAVGLFRLLELSNATEPT 479
           KDI+ RA  K  FSYSRFFAVGLFRLLEL++AT+PT
Sbjct: 185 KDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPT 220



 Score = 55.5 bits (132), Expect(2) = 2e-76
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 481 VLDKLCAALNINKKSVDRDLDVYRNLL 561
           VLDKLCA+LNINKKSVDRDLDVYRNLL
Sbjct: 221 VLDKLCASLNINKKSVDRDLDVYRNLL 247

>THF1_SOLTU (Q7XAB8) Protein THYLAKOID FORMATION1, chloroplast precursor|
          Length = 293

 Score =  251 bits (641), Expect(2) = 2e-76
 Identities = 118/156 (75%), Positives = 139/156 (89%)
 Frame = +3

Query: 12  PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 191
           PTVADTK+ FL +YKRPIP++Y+TVLQEL+VQQHL RYK +YQYDPVFALGFVTVYDQLM
Sbjct: 66  PTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLM 125

Query: 192 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESIL 371
           EGYPS EDR+AIFK+Y+ AL EDPEQYRADAQ++EEWAR+QN N LV+FSS++GEIE+I 
Sbjct: 126 EGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGEIENIF 185

Query: 372 KDISERAQGKGNFSYSRFFAVGLFRLLELSNATEPT 479
           KDI++RA  K  F YSR FAVGLFRLLEL+N T+PT
Sbjct: 186 KDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPT 221



 Score = 54.3 bits (129), Expect(2) = 2e-76
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +1

Query: 481 VLDKLCAALNINKKSVDRDLDVYRNLL 561
           +L+KLCAALN+NKKSVDRDLDVYRNLL
Sbjct: 222 ILEKLCAALNVNKKSVDRDLDVYRNLL 248

>THF1_ANASP (Q8YZ41) Protein thf1|
          Length = 233

 Score =  122 bits (307), Expect(2) = 5e-28
 Identities = 63/156 (40%), Positives = 100/156 (64%), Gaps = 6/156 (3%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           TV+DTK  F   + RPI +IY  V++EL+V+ HL+     + Y+P++ALG VT +D+ ME
Sbjct: 6   TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFME 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSS------RDGE 356
           GY    D+++IF +   A+ ++P++YR DA+R++  A+S   N LV + S      +D +
Sbjct: 66  GYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQDAD 125

Query: 357 IESILKDISERAQGKGNFSYSRFFAVGLFRLLELSN 464
           +++ L+ I+  +    NF YSR FA+GLF LLE SN
Sbjct: 126 LQAQLQAIANNS----NFKYSRLFAIGLFTLLEQSN 157



 Score = 21.2 bits (43), Expect(2) = 5e-28
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LDKLCAALNINKKSVDRDLDVYRNLL 561
           L  + A L+++     +DL++YR+ L
Sbjct: 171 LKSIAAGLHLSDDKFSKDLELYRSNL 196

>THF1_ANAVT (Q3M4B2) Protein thf1|
          Length = 233

 Score =  120 bits (301), Expect(2) = 2e-27
 Identities = 62/156 (39%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           TV+DTK  F   + RPI +IY  V++EL+V+ HL+     + Y+P++ALG VT +D+ M+
Sbjct: 6   TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQ 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSS------RDGE 356
           GY    D+++IF +   A+ ++P++YR DA+R++  A+S   N LV + S      +D +
Sbjct: 66  GYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDAD 125

Query: 357 IESILKDISERAQGKGNFSYSRFFAVGLFRLLELSN 464
           +++ L+ I+       NF YSR FA+GLF LLE SN
Sbjct: 126 LQAQLQAIASNP----NFKYSRLFAIGLFTLLEQSN 157



 Score = 21.6 bits (44), Expect(2) = 2e-27
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 484 LDKLCAALNINKKSVDRDLDVYRNLL 561
           L  + A L+++   + +DL++YR+ L
Sbjct: 171 LKTIAAGLHLSDDKLSKDLELYRSNL 196

>THF1_SYNP7 (Q31MY4) Protein thf1|
          Length = 254

 Score =  109 bits (273), Expect = 5e-24
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
 Frame = +3

Query: 12  PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 191
           PTV+D+K  F  +Y RPI  +Y  V++ELLV+ HL+   +++ YDP+FALG VT +D  M
Sbjct: 5   PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFM 64

Query: 192 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRD---GEIE 362
             Y   E    +F +   A+ ++PEQYR DA  + E  R    + + ++ +     G   
Sbjct: 65  SSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAP 124

Query: 363 SILKDISERAQGKGNFSYSRFFAVGLFRLLE 455
            +++   +   G+  F YSR FA+GLF LLE
Sbjct: 125 ELVRSSFQAIAGRSEFKYSRLFAIGLFSLLE 155

>THF1_SYNP6 (Q5N664) Protein thf1|
          Length = 254

 Score =  109 bits (273), Expect = 5e-24
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
 Frame = +3

Query: 12  PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 191
           PTV+D+K  F  +Y RPI  +Y  V++ELLV+ HL+   +++ YDP+FALG VT +D  M
Sbjct: 5   PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFM 64

Query: 192 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRD---GEIE 362
             Y   E    +F +   A+ ++PEQYR DA  + E  R    + + ++ +     G   
Sbjct: 65  SSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAP 124

Query: 363 SILKDISERAQGKGNFSYSRFFAVGLFRLLE 455
            +++   +   G+  F YSR FA+GLF LLE
Sbjct: 125 ELVRSSFQAIAGRSEFKYSRLFAIGLFSLLE 155

>THF1_SYNEL (Q8DJT8) Protein thf1|
          Length = 222

 Score = 99.8 bits (247), Expect(2) = 1e-21
 Identities = 56/147 (38%), Positives = 83/147 (56%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           TV+DTK  F  ++ RPI SIY   ++ELLV+ HL+R    ++Y P+FALG VT +DQ ME
Sbjct: 6   TVSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFME 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILK 374
           GY    DRD IF +   A   +P+Q + DA   +++       +L E +S  G+  + L 
Sbjct: 66  GYQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQGRPLSQILDELNS--GQPSAPLN 123

Query: 375 DISERAQGKGNFSYSRFFAVGLFRLLE 455
            ++   +      YSR  AVGL+  L+
Sbjct: 124 SLNHTGK------YSRLHAVGLYAFLQ 144



 Score = 22.7 bits (47), Expect(2) = 1e-21
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 484 LDKLCAALNINKKSVDRDLDVYRNLL 561
           LD+L   + +  + V RDL++YR+ L
Sbjct: 158 LDQLAPVIPLPIEKVKRDLELYRSNL 183

>THF1_SYNY3 (P73956) Protein thf1|
          Length = 240

 Score = 98.2 bits (243), Expect(2) = 2e-21
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           TV+D K  F   Y RPI SIY   ++ELLV+ HL+     + YDP+FALG VT ++  M+
Sbjct: 6   TVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQ 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLV-----EFSSRDGEI 359
           GY   E   AIF +    ++++P+Q R DA+ +   A     +  V     E +S D  +
Sbjct: 66  GYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQASGDNLL 125

Query: 360 ESILKDISERAQGKGNFSYSRFFAVGLFRLL 452
            + L  I +R +    F YSR FA+GL+ LL
Sbjct: 126 LNTLTGIHQRHK----FKYSRLFAIGLYTLL 152



 Score = 23.5 bits (49), Expect(2) = 2e-21
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 469 RSQPVLDKLCAALNINKKSVDRDLDVYRNLL 561
           + Q  L +L   L+++   V +DLD+YR+ L
Sbjct: 165 KRQDYLTRLSELLDLSLDKVVKDLDLYRSNL 195

>THF1_SYNJB (P0C1D1) Protein thf1|
          Length = 239

 Score =  100 bits (248), Expect(2) = 2e-21
 Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T++ TK  F  +Y RPI ++Y  V++ELLV+ HL    ST+ YDP FALG VT+YD LME
Sbjct: 6   TLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGLME 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESI-- 368
            Y   E R+AIF +   AL+  PE  R +A+ + E   S +    ++      E E +  
Sbjct: 66  AYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMGSGDPRQRLDLLCLKPEAEDVGG 125

Query: 369 LKDISERAQGKGNFSYSRFFAVGLFRLLEL 458
           LK I ER   +  ++YSR  AVGL+   E+
Sbjct: 126 LKAILER-MTQPPYAYSRVLAVGLYTAYEV 154



 Score = 21.6 bits (44), Expect(2) = 2e-21
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 RSQPVLDKLCAALNINKKSVDRDLDVYRNLL 561
           R++  L+ + + L  + + V +DL++YR+ L
Sbjct: 166 RTRRFLENVVSKLPFSTERVRKDLELYRSSL 196

>THF1_GLOVI (Q7NKS7) Protein thf1|
          Length = 228

 Score = 97.8 bits (242), Expect(2) = 2e-21
 Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           TV+D+K  F  +Y RP+ SIY  V+ ELLV+ HL+     +++DP+FA G +T Y  LME
Sbjct: 6   TVSDSKRAFFAAYPRPVNSIYRRVIDELLVEVHLLITNQDFRHDPLFATGLLTAYQALME 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEI-ESIL 371
           GY   E RDAI ++  TAL    EQ   DA +    A       ++E  +   E  +  L
Sbjct: 66  GYTPVEQRDAILRALCTALELSYEQLHTDAAQWRAIAAELPAQEVLEVMAGKREAGDGRL 125

Query: 372 KDISERAQGKGN---FSYSRFFAVGLFRLLE 455
           K + +   G  N   F YSR F++GL  +LE
Sbjct: 126 KAMGDTLAGIANAERFKYSRLFSLGLANILE 156



 Score = 23.9 bits (50), Expect(2) = 2e-21
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LDKLCAALNINKKSVDRDLDVYRNLL 561
           L ++C  L ++   V RDLD + ++L
Sbjct: 173 LQQICTYLKLDYNRVKRDLDFFHSVL 198

>THF1_SYNJA (Q2JSQ3) Protein thf1|
          Length = 239

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T++ TK  F  +Y RPI + Y  V++ELLV+ HL    S + YDP FALG VT+YD LME
Sbjct: 6   TLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSLME 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARS----QNGNLL-VEFSSRD-GE 356
            Y   E R+AIF +   AL+  PE  R +A+ + E  RS    Q  NLL ++  + D G 
Sbjct: 66  AYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRSGDPVQRYNLLCLKPEAEDVGG 125

Query: 357 IESILKDISERAQGKGNFSYSRFFAVGLFRLLE 455
           +++IL+ +++       ++YSR  AVGL+   E
Sbjct: 126 LKAILQRMTQPP-----YAYSRVLAVGLYTAYE 153

>THF1_PROMM (Q7V7R3) Protein thf1|
          Length = 243

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T+AD+K  F   +   IPS+Y     ELLV+ HL+ ++  +  D +FA+G   V+D    
Sbjct: 6   TIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTS 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGE--IESI 368
           GY        +F +   +   DP   R  AQ+  E  R  +   +  +  + G+   E++
Sbjct: 66  GYRPEAHVKTLFDALCRSCGFDPNALRKQAQQTLESVRGHDLEEVQGWIQQQGKGAPEAL 125

Query: 369 LKDISERAQGKGNFSYSRFFAVGLFRLLELSNATE 473
            K +   A G   F YSR  AVGL  LL  +   E
Sbjct: 126 AKALRNTA-GSTTFHYSRLMAVGLLSLLASAQGDE 159

>THF1_SYNS9 (Q3AY05) Protein thf1|
          Length = 215

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T+AD+K  F +++   I  +Y  +  ELLV+ HL+ ++S+++  P+FA+G  TV+D    
Sbjct: 6   TIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSSFKTTPLFAVGLCTVFDTFSA 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILK 374
           GY   E    +  +  ++   D   +R +++R  + A++++             ++++  
Sbjct: 66  GYRPEEHITGLLDALCSSNGYDANTFRKESKRCIDAAKTES-------------VDAMDS 112

Query: 375 DISERAQGKGNFSYSRFFAVGLFRLLE--LSNATEPTRTGQALRCSK 509
            ++ +  G+G+  YSR  A+G+ RL E    +A +P       RC +
Sbjct: 113 HLAGQKLGEGS-HYSRLMAIGVLRLFEEAKGDADQPDEADLRKRCKE 158

>THF1_SYNPX (Q7U6N6) Protein thf1|
          Length = 212

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T+AD+K  F +++   I  +Y  +  ELLV+ HL+ +++T+Q + +FA+G  TV+++  +
Sbjct: 6   TIADSKRAFHQAFPHVIAPLYRRIADELLVELHLLSHQATFQANSLFAVGLKTVFERFTQ 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILK 374
           GY   E   A+  +  ++   D EQ +  AQ   + A   +          D   +S LK
Sbjct: 66  GYRPMEHPAALLSALCSSNGFDDEQLKQAAQHCLQDAEGHS----------DDAFQSWLK 115

Query: 375 D--ISERAQGKGNFSYSRFFAVGLFRLLELSN 464
           +  +S+ A       YSR  AVGL  LLE S+
Sbjct: 116 EQSLSDGAH------YSRLMAVGLLALLEASS 141

>THF1_SYNSC (Q3AJN7) Protein thf1|
          Length = 215

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 44/153 (28%), Positives = 80/153 (52%)
 Frame = +3

Query: 9   SPTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQL 188
           S T+AD+K  F +++   I  +Y  +  ELLV+ HL+ ++S ++ + +F++G  TV+D  
Sbjct: 4   SQTIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSRFEANELFSVGLCTVFDTF 63

Query: 189 MEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESI 368
           ++GY      DA+F++  ++   D  + R     + E A+ +             + ES+
Sbjct: 64  IKGYRPEAQTDALFRALCSSNGFDAAKLRKTYASLVEQAKGK-------------DPESL 110

Query: 369 LKDISERAQGKGNFSYSRFFAVGLFRLLELSNA 467
              +S  A  +G+  YSR  AVGL  LL+ + A
Sbjct: 111 KDWLSSHALKEGS-HYSRLMAVGLMSLLKAAAA 142

>THF1_PROMT (Q46L45) Protein thf1|
          Length = 199

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/146 (25%), Positives = 70/146 (47%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T++D+K +F K +   IP+IY  +  ELLV+ HL+ ++  ++ D +F+ G   V+ +   
Sbjct: 6   TISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFSKFTS 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILK 374
           GY  +E    +F +       +P +    ++++   A+S     L  F S+         
Sbjct: 66  GYKPSEHATKLFDAICNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNN------ 119

Query: 375 DISERAQGKGNFSYSRFFAVGLFRLL 452
                   KG   YSR  A+G+++L+
Sbjct: 120 ------DNKGYDYYSRINAIGIYKLV 139

>THF1_PROMA (Q7VC23) Protein thf1|
          Length = 214

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 38/158 (24%), Positives = 77/158 (48%)
 Frame = +3

Query: 15  TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 194
           T++D+K  F K +   IP +Y  VL E LV+ +L+  +S ++ D +F+ G +  +++   
Sbjct: 6   TISDSKGLFHKEFPYVIPPVYRKVLDEYLVELNLLSNQSNFKIDTIFSYGLIISFERFTV 65

Query: 195 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILK 374
           GY  +     I +S   + N D +  +  +  +++    +    ++   +   EI+  + 
Sbjct: 66  GYEPDSHISKILESLCNSCNIDIKAIKEYSNNIKKLINEKGIKEIINILT--AEIKKSVG 123

Query: 375 DISERAQGKGNFSYSRFFAVGLFRLLELSNATEPTRTG 488
            I+   Q   +  YSR  A+G++ L  +SN  E  + G
Sbjct: 124 GIALSNQSGKDKYYSRLHAIGIYEL--ISNINEDKKEG 159

>BIMA_EMENI (P17885) Protein bimA|
          Length = 806

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 108 QHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALNEDPEQYRA 278
           Q L  +K   Q DP FA GF     +    Y +NE+ D    +Y + +N D   Y A
Sbjct: 599 QALKCFKRATQLDPHFAYGFTLQGHE----YVANEEYDKALDAYRSGINADSRHYNA 651

>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)|
            (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte
            nuclear envelope protein 1) (Myne-1) (Enaptin)
          Length = 8797

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +3

Query: 168  VTVYDQLMEGYPSNEDRDAIFKSYVTALN---EDPEQYRADAQRMEEWARSQNGNLLVEF 338
            VT+ D++ +     +D  +I K +V +L    +D E Y ++ Q +E+W    +G L+   
Sbjct: 3890 VTLKDKIDQLQSDYQDLCSIGKEHVFSLEAKVKDHEDYNSELQEVEKWLLQMSGRLVAPD 3949

Query: 339  SSRDGEIESILKDIS 383
                  +E+I + ++
Sbjct: 3950 LLETSSLETITQQLA 3964

>SEC17_SCHPO (Q9P4X4) Probable vesicular-fusion protein sec17 homolog|
          Length = 289

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
 Frame = +3

Query: 21  ADTKMNFLKSYKRPIPSIYSTVLQ---ELLVQQHLMRYKSTYQYD--PVF---------A 158
           A T +   KSY+R  PS  + VLQ   EL  ++   R  + Y+ D   +F         A
Sbjct: 75  ASTYVEAFKSYRREKPSEAARVLQIAIELFTRRGNFRRAANYKMDLGDIFEQELQDTKAA 134

Query: 159 LGFVTVYDQLMEGYPSNEDRDAIFKSYVTA--LNEDPEQYRADAQRMEEWARSQNGNLLV 332
           LG    Y+   E Y S++      K+Y+ A  L     +Y    ++ E+ AR+   N L+
Sbjct: 135 LG---AYEDAGEWYSSDQADALANKAYLKAADLAGLCGEYSLAIRKFEQVARASVQNNLL 191

Query: 333 EFSSRD 350
           ++S +D
Sbjct: 192 KWSVKD 197

>SAMN1_HUMAN (Q9NSI8) SAM domain-containing protein SAMSN-1 (SAM domain, SH3|
           domain and nuclear localisation signals protein 1)
           (SH3-SAM adaptor protein) (Hematopoietic adaptor
           containing SH3 and SAM domains 1)
          Length = 373

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +3

Query: 78  STVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALN- 254
           S  LQE L + HL  Y ST                 L+ GY + ED   I +S++  LN 
Sbjct: 243 SKTLQEFLERIHLQEYTSTL----------------LLNGYETLEDLKDIKESHLIELNI 286

Query: 255 EDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDIS 383
           E+P+  R      E +   +    +++    + E  S+  DIS
Sbjct: 287 ENPDDRRRLLSAAENFLEEE----IIQEQENEPEPLSLSSDIS 325

>YJ9G_YEAST (P47170) Hypothetical 182.0 kDa protein in NMD5-HOM6 intergenic|
            region
          Length = 1584

 Score = 26.9 bits (58), Expect(2) = 5.5
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
 Frame = +3

Query: 198  YPSNED--RDAIFKSYVTALNEDPEQYR---ADAQRMEEWARSQNGNLL--------VEF 338
            +PS +D  R+ IF+++   LN D EQY     D  R   + R   G  +        +E 
Sbjct: 902  FPSKDDFDRNFIFRNHSVTLNTDQEQYNQTYKDLLRDMIYMRLLTGFQICVGRQVEKIEL 961

Query: 339  SSRDGEIESIL 371
            S   GE E+++
Sbjct: 962  SRESGESETVV 972



 Score = 21.2 bits (43), Expect(2) = 5.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 23  RYKDELPEVVQTSYSKHLQYSSTRTFGAATSD 118
           R+KD  P+ V   YSK   +++        SD
Sbjct: 870 RWKDVWPKYVARKYSKWRSFTTPAELPITISD 901

>PNO_CRYPV (Q968X7) Pyruvate dehydrogenase [NADP+] (EC 1.2.1.51) (Pyruvate:NADP+|
            oxidoreductase) (CpPNO)
          Length = 1934

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = +3

Query: 120  RYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEE 299
            RY S + YD      FV   D  + G P+ +     F+ +    +   E+ +A     ++
Sbjct: 1593 RYSSLFGYDITVLQLFVECLD--LWGKPNRK----FFQEFYRYCSNPEEKIQA-----KK 1641

Query: 300  WARSQNGNLLVEFSSRDGEIESILK 374
            WA+++   L+ EFSS+ G    + K
Sbjct: 1642 WAQNEGKKLIEEFSSKTGTYLDVFK 1666

>IMA1_CAEEL (Q22560) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
          Length = 524

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +3

Query: 201 PSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQ----NGNLLVEFSSRDGEIESI 368
           PS+E+R  ++KS V   NE   + R D  ++ +  R +    N  + V+ S    E   +
Sbjct: 7   PSHEERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSEL 66

Query: 369 LKDISERAQ 395
           LK +++  Q
Sbjct: 67  LKSVADGLQ 75

>FUT6_ARATH (Q9XI80) Fucosyltransferase 6 (EC 2.4.1.-) (AtFUT6)|
          Length = 537

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 303 PTLPSFVHQPCIAQDLHLTPLHMT*RWHPCPRCWGT 196
           PT P+    PCI Q   + P H+T   H C   WGT
Sbjct: 477 PTGPTAPDPPCI-QSTSMDPCHLTPPSHGCEPEWGT 511

>GAS8_TRYBR (O15697) Trypanin (T lymphocyte-triggering factor) (TLTF)|
          Length = 453

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = +3

Query: 183 QLMEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLL-VEFSSRDGE- 356
           +L+E +   E+RD   +  + A+N +P+     A  ++EW + +N  +  + F  + GE 
Sbjct: 367 KLIESHALVEERDVQLEGVLRAMNLEPKTLELIATEVDEWLQRKNQLIKDLHFELKKGEK 426

Query: 357 -IESILKDISERAQ 395
              + L ++  R Q
Sbjct: 427 LYSATLLEMERRCQ 440


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,812,103
Number of Sequences: 219361
Number of extensions: 1732095
Number of successful extensions: 4913
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4900
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)