ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13m15 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 278 bits (712), Expect = 4e-75 Identities = 140/167 (83%), Positives = 149/167 (89%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA+FQME TGVTF+DVAGVDEAK++F EVV FLKKPERFTAVGA+IP Sbjct: 147 GGPGQAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIP 206 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+P Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSP 266 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII Sbjct: 267 CIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGII 313
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 273 bits (698), Expect = 2e-73 Identities = 135/167 (80%), Positives = 147/167 (88%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA+FQM+ TGV FDDVAG+DEAK++ EVV FLK+PERFTAVGA+IP Sbjct: 146 GGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIP 205 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP Sbjct: 206 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 265 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 C++F+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII Sbjct: 266 CLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGII 312
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 270 bits (689), Expect = 2e-72 Identities = 135/167 (80%), Positives = 146/167 (87%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTAVGA+IP Sbjct: 147 GGPGQAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIP 206 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAP Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAP 266 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTG+I Sbjct: 267 CIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVI 313
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 262 bits (669), Expect = 4e-70 Identities = 129/164 (78%), Positives = 144/164 (87%) Frame = +1 Query: 10 GFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGV 189 G + FG+SKA+FQME TGV FDDVAG+DEAK++ EVV FLK+PE+FTA+GA+IP+GV Sbjct: 188 GQAMSFGKSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGV 247 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 369 LL+GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+V Sbjct: 248 LLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLV 307 Query: 370 FVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 F+DEIDAV NDEREQTLNQLLTEMDGFEGN+GII Sbjct: 308 FIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGII 351
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 251 bits (642), Expect = 6e-67 Identities = 125/161 (77%), Positives = 137/161 (85%) Frame = +1 Query: 19 LGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 L FG+SKA+FQM TG+ FDDVAG++EAK++ EVV FLK P +F AVGA IPKGVLLV Sbjct: 134 LNFGKSKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLV 193 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC+VF+D Sbjct: 194 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFID 253 Query: 379 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 EIDAV NDEREQTLNQLLTEMDGFEGNTG+I Sbjct: 254 EIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVI 294
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 249 bits (635), Expect = 4e-66 Identities = 126/167 (75%), Positives = 141/167 (84%), Gaps = 1/167 (0%) Frame = +1 Query: 4 GPGFP-LGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GPG + FG+SKA+ QMEP T VTF DVAG+++AK + EVV+FLK +RFT +GA+IP Sbjct: 135 GPGSQAMNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIP 194 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK NAP Sbjct: 195 KGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAP 254 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII Sbjct: 255 CIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGII 301
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 244 bits (624), Expect = 7e-65 Identities = 121/166 (72%), Positives = 135/166 (81%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 GPG FG++KA+F ME TG+ F+DVAG++EAK++ E+V FLK +FT VGA IPK Sbjct: 146 GPGQAFNFGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPK 205 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 GVLLVGPPGTGKTLLAKAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APC Sbjct: 206 GVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPC 265 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 IVF+DEIDAV NDEREQTLNQLLTEMDGF G+TG+I Sbjct: 266 IVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVI 311
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 243 bits (621), Expect = 2e-64 Identities = 118/167 (70%), Positives = 138/167 (82%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 224 GGLGGPMDFGRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 283 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 284 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 343 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+I Sbjct: 344 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVI 390
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 243 bits (620), Expect = 2e-64 Identities = 118/167 (70%), Positives = 138/167 (82%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 227 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 286 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 346 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+I Sbjct: 347 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVI 393
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 241 bits (616), Expect = 6e-64 Identities = 117/167 (70%), Positives = 138/167 (82%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 236 GGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 295 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 296 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 355 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+I Sbjct: 356 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVI 402
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 241 bits (616), Expect = 6e-64 Identities = 117/167 (70%), Positives = 137/167 (82%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 227 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 286 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 346 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+I Sbjct: 347 CIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVI 393
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 239 bits (610), Expect = 3e-63 Identities = 115/168 (68%), Positives = 139/168 (82%), Gaps = 1/168 (0%) Frame = +1 Query: 1 GGPG-FPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ G+S A+F+ P+TGV+F D+AG+DEAK +F E+V FLK+P+++T VGA+I Sbjct: 159 GGSGQSPMSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKI 218 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKG+LLVGPPGTGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENA Sbjct: 219 PKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENA 278 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 PCIVF+DEIDAV NDEREQTLNQLLTEMDGF+ N G+I Sbjct: 279 PCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVI 326
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 238 bits (608), Expect = 5e-63 Identities = 116/167 (69%), Positives = 136/167 (81%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 204 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 263 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK AP Sbjct: 264 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAP 323 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+I Sbjct: 324 CIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVI 370
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 231 bits (588), Expect = 1e-60 Identities = 116/167 (69%), Positives = 131/167 (78%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG + FG+SKAK E F DVAG DE KQ+ +EVVEFLK P +F+A+GARIP Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQLL EMDGF N GII Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGII 306
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 229 bits (583), Expect = 4e-60 Identities = 116/167 (69%), Positives = 129/167 (77%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG + FG+SKAK E V F DVAG DE KQ+ +EVVEFLK P +F +GARIP Sbjct: 135 GGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIP 194 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 254 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 C++F+DEIDAV +DEREQTLNQLL EMDGF N GII Sbjct: 255 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGII 301
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 224 bits (570), Expect = 1e-58 Identities = 117/168 (69%), Positives = 132/168 (78%), Gaps = 1/168 (0%) Frame = +1 Query: 1 GGPGF-PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARI Sbjct: 160 GGNGRNPMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARI 219 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P GVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ A Sbjct: 220 PAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA 279 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P I+F+DEIDAV NDEREQTLNQLL EMDGFEGN GII Sbjct: 280 PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGII 327
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 224 bits (570), Expect = 1e-58 Identities = 117/168 (69%), Positives = 132/168 (78%), Gaps = 1/168 (0%) Frame = +1 Query: 1 GGPGF-PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARI Sbjct: 160 GGNGRNPMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARI 219 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P GVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ A Sbjct: 220 PAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA 279 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P I+F+DEIDAV NDEREQTLNQLL EMDGFEGN GII Sbjct: 280 PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGII 327
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 224 bits (570), Expect = 1e-58 Identities = 106/166 (63%), Positives = 130/166 (78%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G +GFG+SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPK Sbjct: 130 GGGKAMGFGKSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPK 189 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPC Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 I+F+DEIDAV NDEREQTLNQ+L EMDGFE N G++ Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVV 295
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 224 bits (570), Expect = 1e-58 Identities = 106/166 (63%), Positives = 130/166 (78%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G +GFG+SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPK Sbjct: 130 GGGKAMGFGKSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPK 189 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPC Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 I+F+DEIDAV NDEREQTLNQ+L EMDGFE N G++ Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVV 295
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 220 bits (561), Expect = 1e-57 Identities = 114/162 (70%), Positives = 132/162 (81%), Gaps = 2/162 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 G PG L F +SKAK +E +T VTFDDVAGV+EAK + EVV+FLK P+R+TA+GA+I Sbjct: 147 GAPGGALAFTKSKAKVYVEGDSTKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKI 206 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKGVLLVGPPGTGKTLLAKA AGEAGVPFF ISGSEFVE+FVG GA+RVRDLF++AK+ A Sbjct: 207 PKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQA 266 Query: 358 PCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 PCIVF+DE+DA+ NDEREQTLNQLLTEMDGF Sbjct: 267 PCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGF 308
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 219 bits (559), Expect = 2e-57 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 292
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 219 bits (559), Expect = 2e-57 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 292
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 219 bits (559), Expect = 2e-57 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 292
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 219 bits (559), Expect = 2e-57 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 292
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 219 bits (559), Expect = 2e-57 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 292
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 219 bits (557), Expect = 4e-57 Identities = 105/167 (62%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+S+AK + VTF DVAG DEAK++ E+V+FL+ P +F +G +IP Sbjct: 125 GGGGKAMSFGKSRAKMLNQDQIKVTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIP 184 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLA+AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAP Sbjct: 185 KGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAP 244 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 C++F+DEIDAV +DEREQTLNQ+L EMDGF GN G+I Sbjct: 245 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVI 291
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 218 bits (555), Expect = 7e-57 Identities = 107/167 (64%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E +TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ +++ AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGII 292
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 218 bits (555), Expect = 7e-57 Identities = 107/167 (64%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ A+++AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN G+I Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVI 292
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 217 bits (553), Expect = 1e-56 Identities = 107/167 (64%), Positives = 132/167 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ ++++AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN GII Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGII 292
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 215 bits (548), Expect = 5e-56 Identities = 107/167 (64%), Positives = 129/167 (77%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVI 303
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 215 bits (548), Expect = 5e-56 Identities = 107/167 (64%), Positives = 129/167 (77%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVI 303
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 214 bits (544), Expect = 1e-55 Identities = 110/169 (65%), Positives = 132/169 (78%), Gaps = 2/169 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+S+AK Q + V F DVAG +E KQ+ +EVV+FLK P+++ +GARIP Sbjct: 167 GGGGNPMSFGKSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIP 226 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 GVLL GPPGTGKTLLAKA+AGEAGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP Sbjct: 227 AGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAP 286 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF--EGNTGII 501 I+F+DEIDAV NDEREQTLNQLL EMDGF +GN+ I+ Sbjct: 287 SIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIV 335
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 211 bits (538), Expect = 7e-55 Identities = 106/167 (63%), Positives = 127/167 (76%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ +GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I Sbjct: 257 CIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVI 303
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 203 bits (516), Expect = 2e-52 Identities = 99/158 (62%), Positives = 124/158 (78%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G +++ E F DVAGVDEAK++ MEVV+FLK P+++T +G +IP+GVLLVGPP Sbjct: 124 GHARSAAVEEGKVTTRFADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPP 183 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLA+A+AGEA VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+D Sbjct: 184 GTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELD 243 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 A+ NDEREQTLNQLL EMDGF+ TG+I Sbjct: 244 AI-GKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLI 280
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 198 bits (504), Expect = 6e-51 Identities = 100/160 (62%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = +1 Query: 25 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGP 204 FG+S+AK +E VTF DVAG++E K++ E++E+LK P +F +G R PKGVLL G Sbjct: 137 FGKSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGE 196 Query: 205 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 384 PG GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEI Sbjct: 197 PGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEI 256 Query: 385 DAVXXXXXXX-XXXXNDEREQTLNQLLTEMDGFEGNTGII 501 DAV +DEREQTLNQLL EMDGF+ + GII Sbjct: 257 DAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGII 296
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 198 bits (503), Expect = 8e-51 Identities = 102/162 (62%), Positives = 120/162 (74%), Gaps = 2/162 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 G G G +SKAK F E + + F DVAG DEAK++ ME V FLK+P R+ +GA+I Sbjct: 321 GSRGGIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKI 380 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P+G +L GPPGTGKTLLAKA AGEAGVPF+ +SGSEFVEMFVGVGA+RVRDLFK A+ENA Sbjct: 381 PRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENA 440 Query: 358 PCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 P IVF+DEIDA+ NDERE TLNQ+L EMDGF Sbjct: 441 PSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGF 482
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 191 bits (486), Expect = 7e-49 Identities = 99/155 (63%), Positives = 120/155 (77%), Gaps = 2/155 (1%) Frame = +1 Query: 22 GFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 G G +K E PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLV Sbjct: 152 GMGSAKKLINAEKPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLV 209 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+D Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269 Query: 379 EIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 EIDA+ NDEREQTLNQLL EMDGF Sbjct: 270 EIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGF 304
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 191 bits (486), Expect = 7e-49 Identities = 99/155 (63%), Positives = 120/155 (77%), Gaps = 2/155 (1%) Frame = +1 Query: 22 GFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 G G +K E PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLV Sbjct: 152 GMGSAKKLINAEKPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLV 209 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+D Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269 Query: 379 EIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 EIDA+ NDEREQTLNQLL EMDGF Sbjct: 270 EIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGF 304
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 191 bits (486), Expect = 7e-49 Identities = 100/170 (58%), Positives = 122/170 (71%), Gaps = 3/170 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G G+S+AK F E + ++F +VAG DEAKQ+ ME V FLK P ++T +GA+I Sbjct: 261 GGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKI 320 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+ A Sbjct: 321 PRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMA 380 Query: 358 PCIVFVDEIDAV--XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P I+F+DEIDA+ NDERE TLNQLL EMDGF + ++ Sbjct: 381 PSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVV 430
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 191 bits (484), Expect = 1e-48 Identities = 97/154 (62%), Positives = 118/154 (76%), Gaps = 1/154 (0%) Frame = +1 Query: 22 GFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 201 G G SK E V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVG Sbjct: 158 GMGSSKKLINAE-KPKVRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVG 216 Query: 202 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 381 PPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF AK+ AP I+F+DE Sbjct: 217 PPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDE 276 Query: 382 IDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 IDA+ NDEREQTLNQLL EMDGF Sbjct: 277 IDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGF 310
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 186 bits (471), Expect = 4e-47 Identities = 89/144 (61%), Positives = 114/144 (79%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 395 Query: 430 DEREQTLNQLLTEMDGFEGNTGII 501 QT+NQLL EMDGF+ N G+I Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVI 419
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 185 bits (470), Expect = 5e-47 Identities = 89/144 (61%), Positives = 114/144 (79%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 453 Query: 430 DEREQTLNQLLTEMDGFEGNTGII 501 QT+NQLL EMDGF+ N G+I Sbjct: 454 PYSRQTINQLLAEMDGFKPNEGVI 477
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 183 bits (465), Expect = 2e-46 Identities = 93/166 (56%), Positives = 116/166 (69%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G G++ AK ++ V F DVAG +EAK + ME V FLK P+++ +GA+IPK Sbjct: 284 GMGGLFSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPK 342 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPC Sbjct: 343 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 402 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 I+F+DEIDAV E+E TLNQLL EMDGF T ++ Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVV 448
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 183 bits (465), Expect = 2e-46 Identities = 93/166 (56%), Positives = 116/166 (69%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G G++ AK ++ V F DVAG +EAK + ME V FLK P+++ +GA+IPK Sbjct: 283 GMGGLFSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPK 341 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPC Sbjct: 342 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 401 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 I+F+DEIDAV E+E TLNQLL EMDGF T ++ Sbjct: 402 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVV 447
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 182 bits (461), Expect = 6e-46 Identities = 88/144 (61%), Positives = 113/144 (78%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIEFPMH 395 Query: 430 DEREQTLNQLLTEMDGFEGNTGII 501 QT+ QLL EMDGF+ N G+I Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVI 419
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 181 bits (460), Expect = 7e-46 Identities = 91/168 (54%), Positives = 120/168 (71%), Gaps = 1/168 (0%) Frame = +1 Query: 1 GGPGFPL-GFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G L G++ AK ++ N V F DVAG +EAK + ME V FLK P+++ +GA+I Sbjct: 148 GGRGGGLFSVGETTAKI-LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKI 206 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKG +L GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+++A Sbjct: 207 PKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHA 266 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 PCI+F+DEIDA+ E+E TLNQ+L EMDGF +T ++ Sbjct: 267 PCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVV 314
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 178 bits (452), Expect = 6e-45 Identities = 87/158 (55%), Positives = 113/158 (71%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+++AK + V FD++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPP Sbjct: 214 GKTQAKLA---KSSVRFDNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPP 270 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLAKA+AGEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID Sbjct: 271 GTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID 330 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 +V EQTLNQLL EMDGF TG++ Sbjct: 331 SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVV 368
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 175 bits (443), Expect = 7e-44 Identities = 86/158 (54%), Positives = 112/158 (70%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+++AK + V F ++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPP Sbjct: 217 GKTQAKLA---KSTVKFTNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPP 273 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLAKA+AGEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID Sbjct: 274 GTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID 333 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 +V EQTLNQLL EMDGF TG++ Sbjct: 334 SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVV 371
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 174 bits (442), Expect = 9e-44 Identities = 84/146 (57%), Positives = 107/146 (73%) Frame = +1 Query: 64 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 T F D+AG E ++ E+V++LK P+++ A GAR PKG+LL GPPGTGKTLLAKA A Sbjct: 207 TDKKFTDIAGNKEPIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATA 266 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 GEA VPFF IS S FVE++VG+GA RVR++FK+A++ AP I+F+DE+DAV Sbjct: 267 GEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGG 326 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGII 501 NDEREQTLNQ+L EMDG N GI+ Sbjct: 327 GNDEREQTLNQILVEMDGINENAGIL 352
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 174 bits (440), Expect = 2e-43 Identities = 89/163 (54%), Positives = 113/163 (69%) Frame = +1 Query: 13 FPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVL 192 FP Q+ F NT V+F DV G DE K++ ++VVEFL+ PE+F +GA++PKGVL Sbjct: 146 FPKFLDQNIGSFA--ENTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVL 203 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 LVGPPG GKTLLAKA++GEA VPF SGS F E+ VG+GASR+R LF AK+N+PC+VF Sbjct: 204 LVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVF 263 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 +DEID+V + QT+NQLL EMDGF+ GII Sbjct: 264 IDEIDSV--GGNRTFSPHHPFANQTINQLLAEMDGFQSKEGII 304
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 167 bits (423), Expect = 1e-41 Identities = 82/146 (56%), Positives = 106/146 (72%) Frame = +1 Query: 64 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 T V FDDV G DEA+ + E+V+FLK P ++ ++G ++PKGVLL GPPGTGKTLLA+A A Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 GEAGV FF +SGSEF E++VGVGA R+RDLF +A+ AP I+F+DE+DA+ Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGII 501 +QTLNQLL E+DGF +GII Sbjct: 396 Y---AKQTLNQLLVELDGFSQTSGII 418
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 166 bits (419), Expect = 4e-41 Identities = 83/138 (60%), Positives = 103/138 (74%), Gaps = 1/138 (0%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXX 423 EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424 Query: 424 XNDEREQTLNQLLTEMDG 477 N E EQTLNQLL EMDG Sbjct: 425 SNTEEEQTLNQLLVEMDG 442
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 164 bits (415), Expect = 1e-40 Identities = 83/136 (61%), Positives = 102/136 (75%) Frame = +1 Query: 94 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 273 +DEAK + E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF Sbjct: 206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHT 265 Query: 274 SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLN 453 +GSEF E+ VG GA RVRDLF KAK APCI+F+DEID+V + QT+N Sbjct: 266 AGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTIN 323 Query: 454 QLLTEMDGFEGNTGII 501 QLL+EMDGF N GII Sbjct: 324 QLLSEMDGFTRNEGII 339
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 145 bits (367), Expect = 5e-35 Identities = 75/146 (51%), Positives = 96/146 (65%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E ++F+D+ G++ +D EVVE LK PE F VG PKGVLL GPPGTGKTL Sbjct: 138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTL 197 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F + GSE V+ F+G GA VRD+FK AKE +PCI+F+DEIDAV Sbjct: 198 LAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR 257 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++TL QLL EMDGF+ Sbjct: 258 TESLTGGDREVQRTLMQLLAEMDGFD 283
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 144 bits (362), Expect = 2e-34 Identities = 72/146 (49%), Positives = 96/146 (65%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ V ++D+ G+++ Q+ EVVE LK PE F VG PKG+LL GPPGTGKTL Sbjct: 160 EVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTL 219 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F + GSE V+ F+G GAS V+D+FK AKE AP I+F+DEIDA+ Sbjct: 220 LAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKR 279 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++TL QLL EMDGF+ Sbjct: 280 TDALTGGDREVQRTLMQLLAEMDGFD 305
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 141 bits (355), Expect = 1e-33 Identities = 74/154 (48%), Positives = 98/154 (63%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E V+++ + G++E ++ E VE LKKPE F +G PKGVLL GPPGTGKTL Sbjct: 141 EVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTL 200 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F I SEFV ++G GA VR +F+ AKE +P I+F+DEIDAV Sbjct: 201 LAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKR 260 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 + E ++TL QLL E+DGFE GN GI+ Sbjct: 261 LKSSTSGDREVQRTLMQLLAELDGFESRGNVGIV 294
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 140 bits (353), Expect = 2e-33 Identities = 71/146 (48%), Positives = 97/146 (66%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + V++DD+ G+DE ++ EVVE LK+PE F VG PKGVLL GPPGTGKTL Sbjct: 169 EVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTL 228 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A A F ++ E V+ F+G GA VR+LF+ A+E AP I+F+DEIDA+ Sbjct: 229 LAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARR 288 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++TL QLL EMDGF+ Sbjct: 289 MRDATSGDREVQRTLTQLLAEMDGFD 314
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 138 bits (348), Expect = 7e-33 Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++E V+++D+ G+D ++ E VE L KPE F VG PKGVLL GPPGTGKT Sbjct: 130 FEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKT 189 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A + F + GSEFV+ ++G GA VR++F+ AKE AP I+F+DE+DA+ Sbjct: 190 LLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAAR 249 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++T+ QLL E+DGF+ Sbjct: 250 RTNSDTSGDREVQRTMMQLLAELDGFD 276
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 133 bits (335), Expect = 2e-31 Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+++ Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 127 FEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKT 186 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A F + GSE V F+G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 187 LMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 246 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 E +TL QLL EMDGF+ GN +I Sbjct: 247 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVI 281
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 133 bits (335), Expect = 2e-31 Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ ++ G++E ++ EVVE LK PE F +G PKGVLL GPPGTGKT+LAKA+A Sbjct: 131 VTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVAT 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F + SEF + FVG GA VR+LF+ AK AP I+F+DEIDA+ Sbjct: 191 ESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSG 250 Query: 427 NDEREQTLNQLLTEMDGFE 483 E ++TL QLL E+DGF+ Sbjct: 251 EREIQRTLMQLLAELDGFD 269
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 133 bits (334), Expect = 3e-31 Identities = 72/155 (46%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 126 FEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 185 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKAIA E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 186 LMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 245 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 E +TL QLL EMDGF+ GN +I Sbjct: 246 RLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVI 280
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 133 bits (334), Expect = 3e-31 Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + VT+ D+ G+D+ ++ E VE L PE+F AVG P GVLL GPPGTGKT+ Sbjct: 142 EVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTM 201 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A + F ++GSE V F+G G+ VRDLF+ A++ P I+F+DEIDAV Sbjct: 202 LAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKR 261 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++T+ QLL+EMDGF+ Sbjct: 262 TDSKTSGDAEVQRTMMQLLSEMDGFD 287
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 132 bits (331), Expect = 7e-31 Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++E KQ+ E VE+ LK E F +G R PKGVLL GPPGTGKTLLAKA+A Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G F S+ G E +VG +R++F+KA+++APCI+F DEIDA+ Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA 568 Query: 427 NDEREQTLNQLLTEMDGFE 483 ++ +NQLLTE+DG E Sbjct: 569 --VTDKVVNQLLTELDGME 585 Score = 123 bits (308), Expect = 3e-28 Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+ E + E++E ++ PE F +G PKGVLLVGPPGTGKTLLAKA+A Sbjct: 176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 EAG F+ I+G E + +VG +R +F++A+ENAP I+F+DEIDA+ Sbjct: 236 EAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI---APKRDEAT 292 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + + QLLT MDG +G ++ Sbjct: 293 GEVERRLVAQLLTLMDGLKGRGQVV 317
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 132 bits (331), Expect = 7e-31 Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 E +TL QLL EMDGF+ GN +I Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVI 283
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 132 bits (331), Expect = 7e-31 Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 E +TL QLL EMDGF+ GN +I Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVI 283
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 130 bits (327), Expect = 2e-30 Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + V ++D+ G+D+ ++ E VE +K P F VG P GVLL GPPGTGKTL Sbjct: 139 EVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTL 198 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 +AKA+A + F ++GSE V F+G GA VRDLF+ A+++ P +VF+DEIDA+ Sbjct: 199 MAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKR 258 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++T+ QLL+EMDGF+ Sbjct: 259 TDSKTSGDAEVQRTMMQLLSEMDGFD 284
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 130 bits (327), Expect = 2e-30 Identities = 68/147 (46%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ V + D+ G++E + EV+E LK PE F +G PKGVLL GPPGTGKT Sbjct: 123 FEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKT 182 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+ F + SEF + FVG GA VR++F+ A+ AP IVF+DEIDA+ Sbjct: 183 LLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAK 242 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE 483 E ++TL QLL E+DGF+ Sbjct: 243 RVDMGTSGEREIQRTLMQLLAEIDGFK 269
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 130 bits (326), Expect = 3e-30 Identities = 68/147 (46%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +TFD + G+ E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLAKA+A Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 G F S V+ ++G A +R++F AKE+ PCI+F+DE+DA+ Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297 Query: 427 NDEREQTLNQLLTEMDGFE--GNTGII 501 + E ++TL +LLT+MDGF+ G T II Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKII 324
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 129 bits (324), Expect = 4e-30 Identities = 65/154 (42%), Positives = 93/154 (60%), Gaps = 1/154 (0%) Frame = +1 Query: 40 AKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTG 216 A ++ + V +D + G+DE Q+ E VE L PERF +G PKGVLL G PGTG Sbjct: 146 AAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTG 205 Query: 217 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX 396 KTLLAKA+A F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 206 KTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIA 265 Query: 397 XXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 + E ++TL QLL EMDGF+ I Sbjct: 266 ARRLNETTGADREVQRTLMQLLAEMDGFDKRKNI 299
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 129 bits (323), Expect = 6e-30 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 267 SEVQRTMLELLNQLDGFEATKNI 289
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 129 bits (323), Expect = 6e-30 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 267 SEVQRTMLELLNQLDGFEATKNI 289
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 129 bits (323), Expect = 6e-30 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 267 SEVQRTMLELLNQLDGFEATKNI 289
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 129 bits (323), Expect = 6e-30 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 267 SEVQRTMLELLNQLDGFEATKNI 289
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 129 bits (323), Expect = 6e-30 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 267 SEVQRTMLELLNQLDGFEATKNI 289
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 128 bits (322), Expect = 7e-30 Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +D + G+DE Q+ E VE L +PERF +G PKGVLL G PGTGKTLLAKA+A Sbjct: 156 VDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 216 RTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGA 275 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++TL QLL EMDGF+ I Sbjct: 276 DREVQRTLMQLLAEMDGFDKRKNI 299
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 128 bits (322), Expect = 7e-30 Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E V F DV G++E ++ E V +K P F +G PKGVLL GPPGTGKTL Sbjct: 129 EVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTL 188 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+AGE F + GSE V F+G GA VR++F+ A+E AP I+F+DEIDA+ Sbjct: 189 LAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKR 248 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++T+ QLL E+DGF+ Sbjct: 249 VDIGTSGDREVQRTMLQLLAELDGFD 274
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 128 bits (321), Expect = 1e-29 Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV ++G G VRD+F+ A+ENAP I+F+DE+D++ Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LLT+MDGF+ +T + Sbjct: 289 DREVQRILIELLTQMDGFDQSTNV 312
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 128 bits (321), Expect = 1e-29 Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 3/147 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 ++F V G++E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 GV F + S V+ ++G A +R++F AKE+ PC++F+DEIDA+ Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248 Query: 427 NDEREQTLNQLLTEMDGFE--GNTGII 501 + E ++TL +LL +MDGF+ G T II Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKII 275
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 128 bits (321), Expect = 1e-29 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 266 SEVQRTMLELLNQLDGFEATKNI 288
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 128 bits (321), Expect = 1e-29 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 202 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 203 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 262 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 263 SEVQRTMLELLNQLDGFEATKNI 285
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 127 bits (320), Expect = 1e-29 Identities = 63/144 (43%), Positives = 89/144 (61%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ + Sbjct: 277 DREVQRILMELLNQMDGFDQTVNV 300
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 127 bits (319), Expect = 2e-29 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 1/147 (0%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 + VT+DDV G+DE K++ E VE+ + P+++T G KGVL GPPGTGKTLLAKA Sbjct: 481 SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA 540 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 417 +A E F S+ G E + M+ G S +RD+F KA+ AP +VF+DE+D++ Sbjct: 541 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL 600 Query: 418 XXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++ +NQLLTEMDG + Sbjct: 601 GDAGGASDRVVNQLLTEMDGMNAKKNV 627 Score = 112 bits (281), Expect = 4e-25 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G + E+VE L+ P+ F A+G + P+GVL+ GPPGTGKTL+A+A+A Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSI---APKRDKTN 327 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + + ++ Sbjct: 328 GEVERRVVSQLLTLMDGMKARSNVV 352
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 127 bits (318), Expect = 2e-29 Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGFE ++ + Sbjct: 283 DREVQRILLELLNQMDGFEQSSNV 306
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 127 bits (318), Expect = 2e-29 Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ + Sbjct: 272 DREVQRILMELLNQMDGFDQTVNV 295
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 127 bits (318), Expect = 2e-29 Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++ AKQ+ ME VE+ LK PE F A + P+G+LL GPPGTGKTLLAKA+A Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F S+ G E + +VG VR++F+KA++ APC++F DEID++ Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSH 571 Query: 427 NDEREQTLNQLLTEMDGFE 483 ER ++QLLTE+DG E Sbjct: 572 VTER--VVSQLLTELDGLE 588 Score = 115 bits (289), Expect = 5e-26 Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+ + E++E LK PE F +G PKGVLL GPPGTGKTL+AKA+A Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F ISG E + + G R+R++F++AKENAP I+F+DEID++ Sbjct: 239 EVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSI---APKREEVT 295 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + + QLL MDG E +I Sbjct: 296 GEVERRVVAQLLALMDGLEARGDVI 320
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 126 bits (317), Expect = 3e-29 Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE APCI+F+DEIDA+ + Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF + I Sbjct: 290 EVQRTMLELLNQLDGFSSDERI 311
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 126 bits (316), Expect = 4e-29 Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ A+ENAP I+F+DEIDA+ Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LLT+MDGF+ + Sbjct: 251 DREVQRILIELLTQMDGFDQGANV 274
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 126 bits (316), Expect = 4e-29 Identities = 63/145 (43%), Positives = 95/145 (65%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ ++EAKQ E+VE+ ++ PE F +G PKG+LL GPPGTGKTLLA+A+A Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G F +++G E + F G R+R++FK+A+ENAP I+F+DEIDA+ Sbjct: 269 EIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI---APKREDVT 325 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + ++ + QLLT MDG +G +I Sbjct: 326 GEVEKRVVAQLLTLMDGIKGRGRVI 350 Score = 120 bits (301), Expect = 2e-27 Identities = 61/137 (44%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G+D KQ E VE+ L+ PE FT G PKG+LL GPPGTGKT+LAKA+A Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G F ++ G E + +VG +R++F+KA++ AP ++F DEID++ Sbjct: 544 ESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG 603 Query: 427 NDEREQTLNQLLTEMDG 477 ER +NQLL EMDG Sbjct: 604 VTER--IVNQLLAEMDG 618
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 125 bits (314), Expect = 6e-29 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 3/159 (1%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 210 S Q+E VT+ DV G E + EVVE L PERF +G PKG++L GPPG Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 TGKTL A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDA Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 283 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 + ++E ++T+ +L+T++DGF+ GN ++ Sbjct: 284 IGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVL 322
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 125 bits (313), Expect = 8e-29 Identities = 64/144 (44%), Positives = 93/144 (64%), Gaps = 2/144 (1%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+D V G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 188 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 189 TDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGG 248 Query: 430 D-EREQTLNQLLTEMDGFEGNTGI 498 D E ++T+ +LL ++DGFE I Sbjct: 249 DSEVQRTMLELLNQLDGFESTKNI 272
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 125 bits (313), Expect = 8e-29 Identities = 64/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGD 260 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE I Sbjct: 261 SEVQRTMLELLNQLDGFEATKNI 283
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 124 bits (312), Expect = 1e-28 Identities = 60/144 (41%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +++ D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA+ Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ +T + Sbjct: 278 DREVQRILLELLNQMDGFDQSTNV 301
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 124 bits (312), Expect = 1e-28 Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 169 YHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF + I Sbjct: 289 EVQRTMLELLNQLDGFSSDDRI 310
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 124 bits (312), Expect = 1e-28 Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ DV G+D+ Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A + Sbjct: 186 TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQ 245 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F I GSE ++ ++G G VR+LF+ A+ENAP IVF+DEIDAV Sbjct: 246 TSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGE 305 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 306 REIQRTMLELLNQLDGFD 323
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 124 bits (311), Expect = 1e-28 Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 210 S + Q + V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG Sbjct: 147 SISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPG 206 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 GKT+LA A+A F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA Sbjct: 207 CGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDA 266 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 + + E ++ L +LL +MDGF+ T + Sbjct: 267 IATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 302
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 124 bits (311), Expect = 1e-28 Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 2/152 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E T++ V G+DE ++ EV+E +K PE F ++G PKGV++ GPPGTGKTL Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA+A+A F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTR 265 Query: 406 XXXXXXXND-EREQTLNQLLTEMDGFEGNTGI 498 D E ++T+ +LL ++DGFE I Sbjct: 266 TEGGKGGGDSEVQRTMLELLNQLDGFESTQNI 297
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 124 bits (310), Expect = 2e-28 Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + +RF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 175 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 234 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 235 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 294 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF + I Sbjct: 295 EVQRTMLELLNQLDGFSSDERI 316
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 124 bits (310), Expect = 2e-28 Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT+ DV G + + EVVE L PERF +G PKG+LL GPPGTGKTL Sbjct: 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDAV Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARF 319 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFE 483 ++E ++T+ +L+T++DGF+ Sbjct: 320 DDGAGGDNEVQRTMLELITQLDGFD 344
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 123 bits (309), Expect = 2e-28 Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVAN 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV+ ++G G VRD+F+ A+E AP IVF+DE+D++ Sbjct: 191 HTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSA 250 Query: 427 NDEREQTLNQLLTEMDGFE 483 + E ++ L +LL +MDGF+ Sbjct: 251 DREVQRVLIELLNQMDGFD 269
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 123 bits (308), Expect = 3e-28 Identities = 62/139 (44%), Positives = 89/139 (64%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +T+DDV G+ EAK + E VE+ L +PE+FT +G P GVLL GPPGTGKTL+AKA+A Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G + + +VG +R F+KA++ AP ++F DE+D++ Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSL--APGRGQTGG 576 Query: 427 NDEREQTLNQLLTEMDGFE 483 N+ E+ +NQLLTE+DG E Sbjct: 577 NNVSERVVNQLLTELDGLE 595 Score = 119 bits (297), Expect = 6e-27 Identities = 59/146 (40%), Positives = 91/146 (62%), Gaps = 1/146 (0%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 G+T++D+ G++ Q E+VE +K P+ F +G P+GVLL GPPGTGKTLLAKA+A Sbjct: 185 GITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVA 244 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E FFSI+G E + + G ++R++F+ AK+++P I+F+DE+D++ Sbjct: 245 NETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSI---APKREDV 301 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGII 501 + + + QLLT MDG EG +I Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVI 327
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 122 bits (307), Expect = 4e-28 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 ++E ++T+ +L+ ++DGF+ GN ++ Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVL 318
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 122 bits (307), Expect = 4e-28 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 ++E ++T+ +L+ ++DGF+ GN ++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVL 317
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 122 bits (307), Expect = 4e-28 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 ++E ++T+ +L+ ++DGF+ GN ++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVL 317
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 122 bits (307), Expect = 4e-28 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 ++E ++T+ +L+ ++DGF+ GN ++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVL 317
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 122 bits (307), Expect = 4e-28 Identities = 62/144 (43%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ N + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNV 305
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 122 bits (307), Expect = 4e-28 Identities = 62/144 (43%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ N + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNV 305
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 122 bits (307), Expect = 4e-28 Identities = 62/144 (43%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 + E ++ L +LL +MDGF+ N + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNV 305
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 122 bits (306), Expect = 5e-28 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + E+F +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 165 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 224 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE +PCI+F+DEIDA+ + Sbjct: 225 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 284 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF + I Sbjct: 285 EVQRTMLELLNQLDGFSSDDRI 306
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 122 bits (306), Expect = 5e-28 Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 303 REIQRTMLELLNQLDGFD 320
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 122 bits (306), Expect = 5e-28 Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 303 REIQRTMLELLNQLDGFD 320
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 122 bits (306), Expect = 5e-28 Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 303 REIQRTMLELLNQLDGFD 320
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 122 bits (306), Expect = 5e-28 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF+ NT + Sbjct: 308 EVQRTMLELLNQLDGFQPNTQV 329
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 122 bits (306), Expect = 5e-28 Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+D V G+ + ++ EV+E +K PE F ++G PKGV+L GPPGTGKTLLA+A+A Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SG+E V+ ++G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGFE + I Sbjct: 266 SEVQRTMLELLNQLDGFETSKNI 288
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 122 bits (306), Expect = 5e-28 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF+ NT + Sbjct: 305 EVQRTMLELLNQLDGFQPNTQV 326
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 122 bits (306), Expect = 5e-28 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF+ NT + Sbjct: 305 EVQRTMLELLNQLDGFQPNTQV 326
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 122 bits (306), Expect = 5e-28 Identities = 61/138 (44%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDAV Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 301 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 302 REIQRTMLELLNQLDGFD 319
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 122 bits (305), Expect = 7e-28 Identities = 61/144 (42%), Positives = 93/144 (64%), Gaps = 2/144 (1%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+++ ++ EV+E +K PE F ++G PKG+LL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262 Query: 430 D-EREQTLNQLLTEMDGFEGNTGI 498 D E ++T+ +LL ++DGFE I Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNI 286
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 121 bits (304), Expect = 9e-28 Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G+++ K++ E VE L KP+ F +G R KG LL GPPG GKTLLAKA+A Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F SI G E + +VG +R++FKKAK+ AP IVF+DEID++ Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 ER +NQLLT +DG E G++ Sbjct: 584 VTER--IVNQLLTSLDGIEVMNGVV 606 Score = 114 bits (284), Expect = 2e-25 Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 1/151 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E + ++++D+ G+ E E++E LK PE F +G PKGV+L GPPGTGKTL+ Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI 240 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A E+G F SI+G E + + G ++R++F KA+E AP I+F+DEID++ Sbjct: 241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSI---AP 297 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + + QLLT MDG + +I Sbjct: 298 KREEVQGEVERRVVAQLLTLMDGMKERGHVI 328
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 121 bits (304), Expect = 9e-28 Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDA 597 Query: 427 NDEREQTLNQLLTEMDG 477 ++ LNQLLTEMDG Sbjct: 598 GGAADRVLNQLLTEMDG 614 Score = 113 bits (283), Expect = 2e-25 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVI 346
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 121 bits (303), Expect = 1e-27 Identities = 58/137 (42%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597 Query: 427 NDEREQTLNQLLTEMDG 477 ++ LNQLLTEMDG Sbjct: 598 GGAADRVLNQLLTEMDG 614 Score = 113 bits (283), Expect = 2e-25 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVI 346
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 121 bits (303), Expect = 1e-27 Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA 597 Query: 427 NDEREQTLNQLLTEMDG 477 ++ LNQLLTEMDG Sbjct: 598 GGAADRVLNQLLTEMDG 614 Score = 113 bits (283), Expect = 2e-25 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVI 346
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 121 bits (303), Expect = 1e-27 Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596 Query: 427 NDEREQTLNQLLTEMDG 477 ++ LNQLLTEMDG Sbjct: 597 GGAADRVLNQLLTEMDG 613 Score = 114 bits (284), Expect = 2e-25 Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 427 NDEREQTL-NQLLTEMDGFEGNTGII 501 N E E+ + +QLLT MDG + +I Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVI 345
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 120 bits (302), Expect = 2e-27 Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+ P IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 303 REIQRTMLELLNQLDGFD 320
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 120 bits (301), Expect = 2e-27 Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Frame = +1 Query: 16 PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 192 P F +++ T+ DV G+D+ ++ +E + +K+ ++F +G R PKG L Sbjct: 160 PSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGAL 219 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 + GPPGTGKTLLA+A A + F ++ + V+M++G GA VRD F AKE AP I+F Sbjct: 220 MYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIF 279 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 489 +DE+DA+ + E ++T+ +LL ++DGF + Sbjct: 280 IDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 318
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 120 bits (301), Expect = 2e-27 Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G + + EVVE L PER+ +G PKGVLL GPPGTGKTL Sbjct: 167 QVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDAV Sbjct: 227 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGII 501 ++E ++T+ +L+ ++DGF+ GN ++ Sbjct: 287 FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVL 320
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 120 bits (300), Expect = 3e-27 Identities = 57/139 (41%), Positives = 88/139 (63%), Gaps = 1/139 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 169 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 228 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 229 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 288 Query: 433 EREQTLNQLLTEMDGFEGN 489 E ++T+ +LL ++DGF+ N Sbjct: 289 EVQRTMLELLNQLDGFQPN 307
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 120 bits (300), Expect = 3e-27 Identities = 57/142 (40%), Positives = 89/142 (62%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 209 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 210 KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDR 269 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 E ++T+ +LL ++DGF+ T + Sbjct: 270 EVQRTMLELLNQLDGFQPTTQV 291
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 119 bits (299), Expect = 3e-27 Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 1/143 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G D KQ+ E VE L + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ + Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGAD 267 Query: 430 DEREQTLNQLLTEMDGFEGNTGI 498 E ++ L +LL +MDGF+ + + Sbjct: 268 REVQRILMELLNQMDGFDVSVNV 290
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 119 bits (299), Expect = 3e-27 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 158 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 217 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 218 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 277 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++E ++T+ +++ ++DGF+ I Sbjct: 278 DDGVGGDNEVQRTMLEIVNQLDGFDARGNI 307
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 119 bits (299), Expect = 3e-27 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++E ++T+ +++ ++DGF+ I Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNI 308
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 119 bits (299), Expect = 3e-27 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++E ++T+ +++ ++DGF+ I Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNI 308
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 119 bits (299), Expect = 3e-27 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++E ++T+ +++ ++DGF+ I Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNI 308
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 119 bits (298), Expect = 5e-27 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593 Query: 427 NDEREQTLNQLLTEMDG 477 ++ +NQ+LTEMDG Sbjct: 594 GGAADRVINQILTEMDG 610 Score = 111 bits (277), Expect = 1e-24 Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 310 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVI 342
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 119 bits (298), Expect = 5e-27 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDG 477 ++ +NQ+LTEMDG Sbjct: 593 GGAADRVINQILTEMDG 609 Score = 111 bits (277), Expect = 1e-24 Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVI 341
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 119 bits (298), Expect = 5e-27 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDG 477 ++ +NQ+LTEMDG Sbjct: 593 GGAADRVINQILTEMDG 609 Score = 111 bits (278), Expect = 9e-25 Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DDV G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVI 341
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 119 bits (298), Expect = 5e-27 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDG 477 ++ +NQ+LTEMDG Sbjct: 593 GGAADRVINQILTEMDG 609 Score = 111 bits (277), Expect = 1e-24 Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVI 341
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 119 bits (297), Expect = 6e-27 Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F PN VT+ D+ +++ +++ M ++ ++ P++F A+G P GVLL GPPG GKT Sbjct: 572 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE 483 + + +NQLLTEMDG E Sbjct: 690 RSDRETGAS---VRVVNQLLTEMDGLE 713 Score = 103 bits (256), Expect = 3e-22 Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 5/153 (3%) Frame = +1 Query: 31 QSKAK-----FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLL 195 Q KAK FQ+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL Sbjct: 247 QKKAKARGLEFQI---SNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLL 303 Query: 196 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 375 GPPG GKTLLA AIAGE +P ++ E V G ++R+LF++A NAPCI+F+ Sbjct: 304 HGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFI 363 Query: 376 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 DEIDA+ D + + QLLT MD Sbjct: 364 DEIDAI---TPKREVASKDMERRIVAQLLTCMD 393
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 118 bits (295), Expect = 1e-26 Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 1/148 (0%) Frame = +1 Query: 43 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGK 219 K E +++ DV G+ E ++ EVVE L PE F VG PKG LL GPPGTGK Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197 Query: 220 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX 399 TLLA+A+A + F + S V+ ++G A +R++F A+++ PCIVF+DEIDA+ Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257 Query: 400 XXXXXXXXXNDEREQTLNQLLTEMDGFE 483 + E ++TL +LL ++DGF+ Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFD 285
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 118 bits (295), Expect = 1e-26 Identities = 55/137 (40%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ ++V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDG 477 ++ +NQ+LTEMDG Sbjct: 593 GGAADRVINQILTEMDG 609 Score = 111 bits (277), Expect = 1e-24 Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + +I Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVI 341
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 118 bits (295), Expect = 1e-26 Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 477 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 535 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGS 594 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++ +NQ+LTEMDG + Sbjct: 595 VGDAGGAADRVINQVLTEMDGMNAKKNV 622 Score = 109 bits (272), Expect = 5e-24 Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F + ++N+P I+F+DEIDA+ Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + ++ ++QLLT MDG + ++ Sbjct: 315 ---APKREKAHGEVEKRIVSQLLTLMDGLKTRAHVV 347
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 117 bits (294), Expect = 1e-26 Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++E K++ E V+ + E+F G KGVL GPPGTGKTLLAKAIA Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G S VRD+F KA+ APC+VF+DE+D++ Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 ++ +NQLLTEMDG + Sbjct: 614 GG-GDRVVNQLLTEMDGVNSKKNV 636 Score = 110 bits (274), Expect = 3e-24 Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G E+VE L+ P+ F ++G + P+G+L+ GPPGTGKTL+A+A+A Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++N+P I+F+DEID++ Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSI---APKREKTN 337 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 + + ++QLLT MDG + + ++ Sbjct: 338 GEVERRVVSQLLTLMDGMKARSNVV 362
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 116 bits (291), Expect = 3e-26 Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFE 483 + E ++TL +LL +MDGF+ Sbjct: 250 DREIQRTLMELLNQMDGFD 268
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 116 bits (291), Expect = 3e-26 Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFE 483 + E ++TL +LL +MDGF+ Sbjct: 250 DREIQRTLMELLNQMDGFD 268
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 116 bits (291), Expect = 3e-26 Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFE 483 + E ++TL +LL +MDGF+ Sbjct: 250 DREIQRTLMELLNQMDGFD 268
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 116 bits (291), Expect = 3e-26 Identities = 59/146 (40%), Positives = 88/146 (60%), Gaps = 1/146 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +M+ + ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTL Sbjct: 172 KMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 231 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A + F I GSE ++ ++G G R +FK A ENAP IVF+DEIDA+ Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR 291 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFD 317
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 116 bits (291), Expect = 3e-26 Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F PN VT+ D+ +++ + + M ++ ++ P++F +G P G+LL GPPG GKT Sbjct: 571 FVTVPN--VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKT 628 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFE 483 + + +NQLLTEMDG E Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLE 712 Score = 103 bits (257), Expect = 3e-22 Identities = 58/148 (39%), Positives = 84/148 (56%) Frame = +1 Query: 31 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 210 ++KA+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL GPPG Sbjct: 248 KAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPG 307 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 GKTLLA AIAGE +P ++ E V G ++R+LF +A NAPCIVF+DEIDA Sbjct: 308 CGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDA 367 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMD 474 + D + + QLLT MD Sbjct: 368 I---TPKREVASKDMERRIVAQLLTCMD 392
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 115 bits (289), Expect = 5e-26 Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G+D Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A Sbjct: 191 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANS 250 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A E +P IVF+DEIDAV Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGE 310 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 311 REIQRTMLELLNQLDGFD 328
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 115 bits (288), Expect = 7e-26 Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 2/138 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX-XXXXXXXX 423 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596 Query: 424 XNDEREQTLNQLLTEMDG 477 ++ LNQLLTEMDG Sbjct: 597 GGGAADRVLNQLLTEMDG 614 Score = 114 bits (284), Expect = 2e-25 Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 427 NDEREQTL-NQLLTEMDGFEGNTGII 501 N E E+ + +QLLT MDG + +I Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVI 345
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 115 bits (287), Expect = 9e-26 Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 E N +T++D+ G+ + E++E LK PE F ++G PKGVL+ G PGTGKT +A Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578 Query: 232 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 411 KAIA E+ + I+G E + +G ++R +FKKA E PCI+F+DEID++ Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI---ANK 635 Query: 412 XXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 N+ ++ ++QLLT MDG + N ++ Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVL 665 Score = 111 bits (278), Expect = 9e-25 Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G++E K+ E + + L+ + + KG+LL GPPG GKTLLAKAIA Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VRDLF KA+ +PCI+F DEID++ Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSL--AKERNSNTN 1048 Query: 427 NDEREQTLNQLLTEMDG 477 ND ++ +NQ+LTE+DG Sbjct: 1049 NDASDRVINQILTEIDG 1065
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 114 bits (286), Expect = 1e-25 Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 1/138 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTLLAKA+A + Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR LF A+E++P IVF+DEIDA+ Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAE 308 Query: 430 DEREQTLNQLLTEMDGFE 483 E ++T+ +LL ++DGF+ Sbjct: 309 REIQRTMLELLNQLDGFD 326
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 113 bits (282), Expect = 3e-25 Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 2/149 (1%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 478 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 535 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXX 411 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595 Query: 412 XXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 ++ +NQ+LTEMDG + Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAKKNV 624 Score = 111 bits (278), Expect = 9e-25 Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 2/157 (1%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E + +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++ ++N P I+F+DEIDA+ Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315 Query: 394 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGII 501 N E E+ + +QLLT MDG +G + ++ Sbjct: 316 ----APKREKTNGEVERRIVSQLLTLMDGVKGRSNLV 348
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 111 bits (278), Expect = 9e-25 Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 7/155 (4%) Frame = +1 Query: 34 SKAKFQMEPNTG------VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 192 SKA+ + + G VT+DD+ G+D K + ++ ++ LK PE FT+ G + G+L Sbjct: 711 SKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGIL 769 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 GPPGTGKTL+AKAIA + FFS+ G E + M++G + VR +F+KA+E PC++F Sbjct: 770 FYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIF 829 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 477 DEID+V ++ ++QLL E+DG Sbjct: 830 FDEIDSV-APKRGNQGDSGGVMDRIVSQLLAELDG 863
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 111 bits (278), Expect = 9e-25 Identities = 50/139 (35%), Positives = 86/139 (61%), Gaps = 1/139 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+ + ++ E + +++ ++F +G + PKG L+ GPPGTGKTLLA+A A ++ Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS 243 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++ + V+MF+G GA VRD F AKE +P I+F+DE+DA+ + Sbjct: 244 NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDR 303 Query: 433 EREQTLNQLLTEMDGFEGN 489 E ++T+ +LL ++DGF + Sbjct: 304 EVQRTMLELLNQLDGFSSD 322
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 110 bits (276), Expect = 2e-24 Identities = 58/145 (40%), Positives = 89/145 (61%), Gaps = 2/145 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DD+ G+D K + M+ ++ LK PE F++ G + G+L GPPGTGKTLLAKAIA Sbjct: 699 VTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIAS 757 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 758 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 816 Query: 427 NDEREQTLNQLLTEMDGF-EGNTGI 498 ++ ++QLL E+DG G G+ Sbjct: 817 GGVMDRIVSQLLAELDGMSSGGDGV 841
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 110 bits (276), Expect = 2e-24 Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 988 VTWDDVGGLGNVKDAITETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1047 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1105 Query: 427 NDEREQTLNQLLTEMDGFEGNTG 495 ++ ++QLL E+DG G G Sbjct: 1106 GGVMDRIVSQLLAELDGMSGGEG 1128
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 109 bits (272), Expect = 5e-24 Identities = 65/153 (42%), Positives = 85/153 (55%), Gaps = 4/153 (2%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E G TF D G+ + + M V+ + PE F +G + P G+L GPPG GKT Sbjct: 223 EVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTK 282 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA AIA EAGVPF+ IS +E + G +R+LF KA AP IVF+DEIDA+ Sbjct: 283 LANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---- 338 Query: 406 XXXXXXXNDERE---QTLNQLLTEMDGFEGNTG 495 N +RE + + QLLT MDG GN G Sbjct: 339 --GSKRENQQREMEKRIVTQLLTCMDG-PGNKG 368 Score = 107 bits (268), Expect = 1e-23 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV G+D + F +V +KKP+ + A G + G LL GPPG GKTL+AKA A Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 EAG F I G+E + +VG +R LF++A+ APC++F DE+DA+ Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV 644 Query: 427 NDEREQTLNQLLTEMDGFE 483 E+ LNQ L E+DG E Sbjct: 645 ---VERLLNQFLVELDGGE 660
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 109 bits (272), Expect = 5e-24 Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++DV G+D K + ++ +E LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 810 VKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIAT 868 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 869 NFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 927 Query: 427 NDEREQTLNQLLTEMDGFEGNTG 495 ++ ++QLL E+DG G G Sbjct: 928 GGVMDRIVSQLLAELDGMSGAEG 950
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 109 bits (272), Expect = 5e-24 Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 1/140 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G++ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 991 VTWDDVGGLNNVKDAVTETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1050 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1108 Query: 427 NDEREQTLNQLLTEMDGFEG 486 ++ ++QLL E+DG G Sbjct: 1109 GGVMDRIVSQLLAELDGMSG 1128
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 108 bits (270), Expect = 8e-24 Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PN G +DDV G+ K +E ++ L++PE F A G + G+L GPPGTGKTLLAK Sbjct: 1025 PNVG--WDDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1081 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 AIA E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1082 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGN 1140 Query: 415 XXXXNDEREQTLNQLLTEMDGFEG 486 ++ ++QLL E+DG G Sbjct: 1141 QGDSGGVMDRIVSQLLAELDGMNG 1164
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 108 bits (269), Expect = 1e-23 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ K ME ++ LK PE F + G + G+L GPPGTGKTLLAKAIA Sbjct: 715 VTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIAT 773 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 774 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSV-APKRGNQGDS 832 Query: 427 NDEREQTLNQLLTEMDGFEGN 489 ++ ++QLL E+DG + Sbjct: 833 GGVMDRIVSQLLAELDGMSSD 853
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 107 bits (268), Expect = 1e-23 Identities = 56/136 (41%), Positives = 87/136 (63%), Gaps = 1/136 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G++EAK + ++ L+ PE F+ G + GVLL GPPGTGKTLLAKA+A Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + F SI G E + M+VG + VR++F+KA+ ++PC++F DE+D++ Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG 770 Query: 427 NDEREQTLNQLLTEMD 474 N ++ ++QLL E+D Sbjct: 771 N-VMDRVVSQLLAELD 785 Score = 37.0 bits (84), Expect = 0.030 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +1 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC-I 366 LL G P TGKT + +A P F+IS EF + +++ D+F + +PC I Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQNVVKSPCAI 484 Query: 367 VFVDEIDAV 393 +FV ++D + Sbjct: 485 IFVKDLDVL 493
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 107 bits (267), Expect = 2e-23 Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++DV G+D K + ++ ++ +K PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 816 VKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIAT 874 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 875 NFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSV-APKRGNQGDS 933 Query: 427 NDEREQTLNQLLTEMDGFEGNTG 495 ++ ++QLL E+DG G G Sbjct: 934 EGVMDRIVSQLLAELDGMSGGDG 956
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 107 bits (267), Expect = 2e-23 Identities = 53/142 (37%), Positives = 85/142 (59%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 255 F ++ G +EAK+ ++++L+ P+ F G PK VL GPPGTGKTL+A+A+A E Sbjct: 123 FSEIIGQEEAKKKCRIIMKYLENPKLF---GEWAPKNVLFYGPPGTGKTLMARALATETN 179 Query: 256 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 435 F + E + VG + +R+L+++A E+APCIVF+DE+DA+ + Sbjct: 180 SSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAI--GLSREYQSLRGD 237 Query: 436 REQTLNQLLTEMDGFEGNTGII 501 + +N LLTE+DG + N G++ Sbjct: 238 VSEVVNALLTELDGIKENEGVV 259
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 107 bits (266), Expect = 2e-23 Identities = 55/140 (39%), Positives = 85/140 (60%), Gaps = 1/140 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G+D K + M+ ++ LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 836 VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIAT 894 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 895 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 953 Query: 427 NDEREQTLNQLLTEMDGFEG 486 ++ ++QLL E+DG G Sbjct: 954 GGVMDRIVSQLLAELDGMSG 973
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 106 bits (264), Expect = 4e-23 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 11/174 (6%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ E K++ +E ++ + Sbjct: 671 GFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPEL 730 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 789 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 +A+ APCI+F DE+D++ ++ ++QLL E+DG + Sbjct: 790 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDV 842 Score = 38.1 bits (87), Expect = 0.013 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG GKT + A G+ + S G ++++ +F +A+ P + Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 367 VFVDEID 387 + + +D Sbjct: 526 LLLTAVD 532
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 106 bits (264), Expect = 4e-23 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 2/149 (1%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 PN G +DDV G++ K+D ++ +E K + + G + G+L GPPGTGKTLLAKA Sbjct: 714 PNVG--WDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKTLLAKA 771 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 417 IA + FFS+ G E + M++G + VR +F+KA++ PC+VF DE+D+V Sbjct: 772 IATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSV-APQRGNQ 830 Query: 418 XXXNDEREQTLNQLLTEMDGFE--GNTGI 498 ++ ++QLL E+DG G G+ Sbjct: 831 GDSGGVMDRIVSQLLAELDGMSTAGGEGV 859
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 106 bits (264), Expect = 4e-23 Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ +V + + + M +V+ +K+PE + VG P GVLL GPPG GKTLLAKA+A Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F SI G E + +VG +R +F +A+ + PC++F DE+DA+ Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDAL---VPRRDTSL 646 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 ++ + +N LLTE+DG GI Sbjct: 647 SESSSRVVNTLLTELDGLNDRRGI 670 Score = 98.6 bits (244), Expect = 8e-21 Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 1/140 (0%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PN+ + + G+D+ ME++ + PE F + G P+GVLL GPPG GKT +A Sbjct: 200 PNSSLK--SLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+AGE VPF SIS V G ++RDLF +A+ APC+VF DEIDA+ Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317 Query: 415 XXXXNDEREQTLNQLLTEMD 474 + R + QLLT MD Sbjct: 318 AQREMERR--IVAQLLTSMD 335
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 105 bits (261), Expect = 9e-23 Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G+ +AK +E +E+ K F++ R+ G+LL G PG GKTLLA A+A Sbjct: 796 VRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAA 855 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + G+ F SI G E + ++G VR+LF++A+ PCI+F DE D++ Sbjct: 856 QCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 915 Query: 427 NDEREQTLNQLLTEMDGFEGNTGI 498 D + +NQ+LT+MDG EG G+ Sbjct: 916 TD---RVVNQMLTQMDGAEGLDGV 936
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 104 bits (260), Expect = 1e-22 Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 11/174 (6%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ + K++ +E ++ + Sbjct: 672 GFPLLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPEL 731 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 732 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 790 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 +A+ APCI+F DE+D++ ++ ++QLL E+DG + Sbjct: 791 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDV 843 Score = 33.9 bits (76), Expect = 0.25 Identities = 17/67 (25%), Positives = 30/67 (44%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 367 VFVDEID 387 + + +D Sbjct: 527 LLLTAVD 533
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 104 bits (260), Expect = 1e-22 Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 11/174 (6%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ + K++ +E ++ + Sbjct: 669 GFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPEL 728 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 729 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 787 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 +A+ APCI+F DE+D++ ++ ++QLL E+DG + Sbjct: 788 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDV 840 Score = 33.5 bits (75), Expect = 0.33 Identities = 17/67 (25%), Positives = 30/67 (44%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 367 VFVDEID 387 + + +D Sbjct: 526 LLLTALD 532
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 103 bits (258), Expect = 2e-22 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G +E K E+++ L+ E F +G PKGVLL GPPG KTL AKA+A Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G+ F ++ G E +VG +R++F+KA+ AP I+F DEIDA+ Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA 632 Query: 427 NDEREQTLNQLLTEMDGFEGNTGII 501 L LL E+DG E G++ Sbjct: 633 ---ANHVLTSLLNEIDGVEELKGVV 654 Score = 85.1 bits (209), Expect = 9e-17 Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Frame = +1 Query: 31 QSKAKFQM-EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGP 204 Q+ K+ + EP +++ V G+D+ + +E L +P F++ G P+G+LL GP Sbjct: 231 QANRKYNLPEP---LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGP 287 Query: 205 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 384 PGTGKT+L + +A + +I+G V ++G + +RD+F +A++ P I+F+DEI Sbjct: 288 PGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEI 347 Query: 385 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 477 D++ + R + LLT MDG Sbjct: 348 DSIAPNRANDDSGEVESR--VVATLLTLMDG 376
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 103 bits (257), Expect = 3e-22 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 1/142 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 +D + G+ E +Q M+ ++ K PE F + R G+LL GPPGTGKTLLA IA E+ Sbjct: 839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 + F S+ G E + ++G VRD+F +A+ PCI+F DE +++ D Sbjct: 899 RMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTD 958 Query: 433 EREQTLNQLLTEMDGFEGNTGI 498 + +NQLLT++DG EG G+ Sbjct: 959 ---RVVNQLLTQLDGVEGLQGV 977
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 102 bits (255), Expect = 4e-22 Identities = 53/149 (35%), Positives = 86/149 (57%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 E + +T DDV G ++AK ++++L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVRSSITMDDVIGQEDAKIKCRIIMKYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + +N LLTEMDG N G++ Sbjct: 234 YQSLRGDVSEVVNALLTEMDGINQNWGVV 262
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 102 bits (255), Expect = 4e-22 Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 1/151 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER-FTAVGARIPKGVLLVGPPGTGKTL 225 ++ T + + D+ + AK +E +E+ K E F R+ G+LL G PG GKTL Sbjct: 687 KLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTL 746 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA A+A + G+ F S+ G E + F+G +R+LF++A+ PCI+F DE D++ Sbjct: 747 LASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKR 806 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGI 498 D + +NQLLT+MDG EG G+ Sbjct: 807 GHDSTGVTD---RVVNQLLTQMDGAEGLDGV 834
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 102 bits (253), Expect = 8e-22 Identities = 53/149 (35%), Positives = 85/149 (57%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 E + +T DDV G ++AK ++ +L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVKSDITMDDVIGQEDAKIKCRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + + +N LLTEMDG N G++ Sbjct: 234 FQSLRGDVSEVVNALLTEMDGINQNWGVV 262
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 102 bits (253), Expect = 8e-22 Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 2/146 (1%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ T V FDD+AG D AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 333 VDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 390 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 391 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 447 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 +D + + L E DG + Sbjct: 448 CERREGEHDASRRLKTEFLIEFDGVQ 473
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 100 bits (249), Expect = 2e-21 Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 2/146 (1%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ T V FDD+AG + AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 331 VDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 388 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 389 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 445 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE 483 +D + + L E DG + Sbjct: 446 CERREGEHDASRRLKTEFLIEFDGVQ 471
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 100 bits (249), Expect = 2e-21 Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 2/146 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ + K+ + VE+ +K F +G +G+LL GPPG KT LAKA A Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXXXXXX 423 A FFS+S +E M+VG G + +R+ F++A+ +P I+F DE D V Sbjct: 343 AAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSN 402 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGII 501 + E+ L+ LLTEMDG E GI+ Sbjct: 403 SSTVGERLLSTLLTEMDGLEEAKGIL 428 Score = 60.8 bits (146), Expect = 2e-09 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = +1 Query: 82 DVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV 258 ++ G + A Q E++ F + P +G + P+G+LL GPPGTGKT L +A+ E Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 259 PFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAV 393 +S G +R+ F +A +A P ++F+DEID + Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVL 131
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 100 bits (249), Expect = 2e-21 Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 2/145 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++ K + ++ ++ LK PE F A G + G+L GPPGTGKTLLAKA+A Sbjct: 720 VFWEDIGGLEMVKGEILDTIDMPLKFPELF-ASGMKKRSGILFYGPPGTGKTLLAKAVAT 778 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F++A++ PC++F DE+D+V Sbjct: 779 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSV-APKRGNQGDS 837 Query: 427 NDEREQTLNQLLTEMDGFE-GNTGI 498 ++ ++QLL E+DG G G+ Sbjct: 838 GGVMDRIVSQLLAELDGLSTGGDGL 862
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 97.4 bits (241), Expect = 2e-20 Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 1/114 (0%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 +PN V +DD+AG++ AK+ E V +K P+ F+ G + G+LL GPPGTGK+ LA Sbjct: 123 KPN--VRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLA 179 Query: 232 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 KA+A EAG FFSIS S+ V ++G VR LF+ A+E P I+F+DEID++ Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL 233
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 95.9 bits (237), Expect = 5e-20 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 181 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG 486 P +F+DEID++ +DE E + ++LL +MDG G Sbjct: 299 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGG 339
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 95.9 bits (237), Expect = 5e-20 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 181 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG 486 P +F+DEID++ +DE E + ++LL +MDG G Sbjct: 299 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGG 339
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 95.9 bits (237), Expect = 5e-20 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 183 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 240 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 241 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 300 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG 486 P +F+DEID++ +DE E + ++LL +MDG G Sbjct: 301 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGG 341
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 95.5 bits (236), Expect = 7e-20 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 2/144 (1%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ GV +DDVAG+ EAK+ E V L PE F G R P KGVL+ GPPGTGKTL Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTL 287 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E G FF++S + + G VR LF A+ AP +F+DEID++ Sbjct: 288 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347 Query: 406 XXXXXXXNDEREQTLNQLLTEMDG 477 + R + ++LL ++DG Sbjct: 348 GGSGEHESSRRVK--SELLVQVDG 369
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 95.5 bits (236), Expect = 7e-20 Identities = 54/140 (38%), Positives = 81/140 (57%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 +TF D+ G++ KQ+ + V FL K + ++ P G L GPPGTGKTL+AKA++ E Sbjct: 346 ITFRDIGGMESLKQE-LATVAFLLKQKNYSN---SYPMGYLFAGPPGTGKTLMAKAMSYE 401 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A P+ + GS+F GV +RV DLFK+ + +PCI+++DEID++ Sbjct: 402 AETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSI--------AERR 453 Query: 430 DEREQTLNQLLTEMDGFEGN 489 +E + L QL T D EG+ Sbjct: 454 EEANKQLEQLKTIGDSIEGS 473
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 95.1 bits (235), Expect = 9e-20 Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPP 207 S A +PN V ++DVAG++ AK+ E V +K P F G R P G+LL GPP Sbjct: 120 SSAILSEKPN--VKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPP 175 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGK+ LAKA+A EA FFS+S S+ V ++G V+ LF A+EN P I+F+DE+D Sbjct: 176 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVD 235 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDG 477 A+ ++ + +LL +M+G Sbjct: 236 AL---TGTRGEGESEASRRIKTELLVQMNG 262
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 95.1 bits (235), Expect = 9e-20 Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 2/163 (1%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + PE F G R P Sbjct: 181 GSGYDKDLIEALERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKTLLAKA+A E FF+IS S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG 486 P +F+DEID++ R + +LL +MDG G Sbjct: 299 PTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGG 339
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 94.7 bits (234), Expect = 1e-19 Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 2/147 (1%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ N V + D+AG+ EAK+ E V L P+ F G R P KGVL+VGPPGTGKT+ Sbjct: 225 VQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPPGTGKTM 282 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E G FF++S + + G VR LF+ A+ AP +F+DEID++ Sbjct: 283 LAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSI--CS 340 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEG 486 ++ + ++LL +MDG G Sbjct: 341 KRGTGSEHEASRRVKSELLIQMDGVSG 367
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 94.4 bits (233), Expect = 2e-19 Identities = 54/152 (35%), Positives = 84/152 (55%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+ + F++ + F D+ G+ + + E+V FL+ R +P G+LL GPP Sbjct: 957 GERQTGFRVFLESRKKFTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPHGILLTGPP 1016 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLL +A+AGEA VP +SGS +E A +++ +F++A++ APCIVF+DEID Sbjct: 1017 GTGKTLLVQALAGEAQVPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEID 1075 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 483 + + +R Q L + GFE Sbjct: 1076 TL-----------SSKRSQLLQNPMANDPGFE 1096 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = +1 Query: 310 GASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 489 GA + D FKK K+N N+++ L+QLL E+DG +G Sbjct: 1125 GAKKEFDNFKKQKKNP----------------AEYNSKQNEKQVSLLSQLLIELDGIQGR 1168 Query: 490 TGII 501 G++ Sbjct: 1169 NGVV 1172
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 92.0 bits (227), Expect = 8e-19 Identities = 59/146 (40%), Positives = 80/146 (54%), Gaps = 2/146 (1%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 234 N V +DD+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNT 492 R + +LL +MDG G + Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGTS 344
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 92.0 bits (227), Expect = 8e-19 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 3/111 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 244 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL 239
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 92.0 bits (227), Expect = 8e-19 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 3/111 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 244 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL 239
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 90.5 bits (223), Expect = 2e-18 Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 2/110 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V +DD+AG++ AK E V + +P+ F G R P +G+LL GPPGTGKT+LA+A+A Sbjct: 602 VHWDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVA 659 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 E+ FFSIS S ++G VR LF AK+ +P I+FVDEID++ Sbjct: 660 TESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI 709
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 89.7 bits (221), Expect = 4e-18 Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 2/163 (1%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N V + D+A + EAK+ E V + PE F G R P Sbjct: 184 GTGYDKDLVEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRP 241 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKTLLAKA+A E FF++S S + G VR LF+ A+ + Sbjct: 242 WKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYS 301 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG 486 P +F+DEID++ R + +LL +MDG G Sbjct: 302 PATIFIDEIDSICSRRGTSEEHEASRRMKA--ELLVQMDGVGG 342
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 88.6 bits (218), Expect = 9e-18 Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V ++D+AG+ AK E V + +P+ F G R P +G+LL GPPGTGKT++AKA+A Sbjct: 468 VYWEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVA 525 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+ FFS+S S + ++G VR LF AK+ +P I+F+DEID++ Sbjct: 526 TESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSM-------LTA 578 Query: 424 XNDEREQTLNQLLTEM 471 +D ++ ++ TE+ Sbjct: 579 RSDNENESSRRIKTEL 594
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 88.6 bits (218), Expect = 9e-18 Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 2/144 (1%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 234 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 415 XXXXNDEREQTLNQLLTEMDGFEG 486 R + +LL +MDG G Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGG 342
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 87.4 bits (215), Expect = 2e-17 Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 3/116 (2%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 228 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 229 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL 232
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 87.4 bits (215), Expect = 2e-17 Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 3/116 (2%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 228 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 229 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL 232
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 86.3 bits (212), Expect = 4e-17 Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 21/171 (12%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHK-ELYREYALRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P IVF DE+D++ +D + QLL+E+DG EG +I Sbjct: 362 EGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVI 410
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 85.9 bits (211), Expect = 6e-17 Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 21/171 (12%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P IVF DE+D++ +D + QLL+E+DG EG +I Sbjct: 362 EGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVI 410
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 85.9 bits (211), Expect = 6e-17 Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 21/171 (12%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 P IVF DE+D++ +D + QLL+E+DG EG +I Sbjct: 362 EGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVI 410
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 82.8 bits (203), Expect = 5e-16 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 6/141 (4%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V FDD+ G+D E+V L PE + P+GVL GPPGTGKTL+A+A+A Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469 Query: 247 -----EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 411 E + FF G++ + +VG ++R LF++AK++ P I+F DEID + Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSS 529 Query: 412 XXXXXNDEREQTLNQLLTEMD 474 + TL L+ MD Sbjct: 530 KQEQIHASIVSTLLALMDGMD 550
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 82.0 bits (201), Expect = 8e-16 Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 2/109 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFT-AVGARIPKGVLLVGPPGTGKTLLAKAIA 243 +TF D+ G+D D E V + L PE ++ + + P GVLL GPPG GKT+LAKA+A Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALA 147 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 E+G F SI S ++ + G V +F A + PCI+F+DEID+ Sbjct: 148 KESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDS 196
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 81.3 bits (199), Expect = 1e-15 Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 ++ DD+ G+ + KQ E V L PE F G R P K ++L GPPGTGKTL+A+AIA Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIA 247 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+ FF++S ++ + G VR LF+ A+ AP I+F+DEID + Sbjct: 248 SESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTL--GGQRGNSG 305 Query: 424 XNDEREQTLNQLLTEMDG 477 ++ + ++ L +MDG Sbjct: 306 EHEASRRVKSEFLVQMDG 323
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 80.9 bits (198), Expect = 2e-15 Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 6/156 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M ++ V FD V G+ Q EVV F + PE F PKGV+ GPPGTGKTL+ Sbjct: 382 MSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441 Query: 229 AKAIAGEA-----GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A E V FF G++ + +VG ++R LF +A P I+F DEID + Sbjct: 442 ARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGL 501 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + ++ LL MDG +G ++ Sbjct: 502 ---APVRSSKQDQIHASIVSTLLALMDGLDGRGEVV 534
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 79.7 bits (195), Expect = 4e-15 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ +T V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 72 MQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 131 Query: 229 AKAIA-----GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A G+ V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 132 ARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGL 191 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + ++ LL MDG + I+ Sbjct: 192 ---APVRSSRQDQIHSSIVSTLLALMDGLDSRGEIV 224
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 77.8 bits (190), Expect = 2e-14 Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 248 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 307 Query: 229 AKAIA-----GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A G+ V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 308 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 367 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + ++ LL MDG + I+ Sbjct: 368 ---APVRSSRQDQIHSSIVSTLLALMDGLDSRGEIV 400
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 77.8 bits (190), Expect = 2e-14 Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 417 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 476 Query: 229 AKAIA-----GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A G+ V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 477 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 536 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + ++ LL MDG + I+ Sbjct: 537 ---APVRSSRQDQIHSSIVSTLLALMDGLDSRGEIV 569
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 77.0 bits (188), Expect = 3e-14 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 3/110 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 240 VT+ DVAG+DE + + V L +R G+++ PKGVLL GPPG GKTL+AKA Sbjct: 91 VTWRDVAGLDEIISEMQDTV-ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKAT 149 Query: 241 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 A +G F ++ S + + G +F A + PCI+F+DEID+ Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDS 199
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 76.6 bits (187), Expect = 3e-14 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 3/110 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 240 +T+ D+AG+DE + + V L +R G+R+ PKGVLL GPPG GKTL+AKA Sbjct: 92 ITWHDIAGLDEVITELKDTV-ILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKAT 150 Query: 241 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS 200
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 4e-14 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS 196
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 4e-14 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS 196
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 76.3 bits (186), Expect = 4e-14 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS 196
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 70.5 bits (171), Expect = 2e-12 Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 1/110 (0%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 N D+ G++E K F K+ E + G IPKG+LLVG GTGK+L AK+ Sbjct: 238 NPVTKISDIGGLNELKSWLKFRAASFSKRAEEY---GLPIPKGLLLVGIQGTGKSLTAKS 294 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 IA E +P + +G +RVR + + A+ +PCI+++DEID Sbjct: 295 IANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEID 344
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 69.7 bits (169), Expect = 4e-12 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARI---PKGVLLVGPPGTGKTLL 228 + G +D++ G +E E+ + + P RF + G+ + P+G+LL GPPG GKTLL Sbjct: 77 DVGADWDEIGGCEEL---VAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 133 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 AKA+A AG F ++ S + + G +F A++ P I+F+DEID+ Sbjct: 134 AKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDS---FLR 190 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGN 489 ++ Q +T DGF + Sbjct: 191 DRQSHDHESTAMMKAQFMTLWDGFSSS 217
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 65.9 bits (159), Expect = 6e-11 Identities = 34/120 (28%), Positives = 62/120 (51%) Frame = +1 Query: 124 VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 303 +V+ ++ + G ++ +L GPPG GKTL A+ A E G+P F + + ++ Sbjct: 100 LVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYL 159 Query: 304 GVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 483 G A+ +R F+ A++ PC++F DE DA+ ++E + +N LL +D + Sbjct: 160 GETATNIRKTFEFARKQ-PCVLFFDEFDAL--ARTRDDSGEHNELRRVVNSLLLFIDNMQ 216
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 63.9 bits (154), Expect = 2e-10 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 10/129 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + +G+LL GPPGTGKTL+A+ I A P ++G + ++ +VG S Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESES 377 Query: 319 RVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 VR LF A+E + I+ DEIDA+ + + +NQLL++MD Sbjct: 378 NVRKLFADAEEEWRRCGANSGLHIIIFDEIDAI-CKQRGSMAGSSSVHDTVVNQLLSKMD 436 Query: 475 GFEGNTGII 501 G E I+ Sbjct: 437 GVEQLNNIL 445 Score = 30.4 bits (67), Expect = 2.8 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 V+L G TGKT LA +A + PF IS + V ++ F+ AK + Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 364 IVFVDEID 387 ++ +D ++ Sbjct: 676 VLLIDNLE 683
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 63.5 bits (153), Expect = 3e-10 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 5/108 (4%) Frame = +1 Query: 79 DDVAGVDEAKQDFMEVVEFLKKPERFTA-----VGARIPKGVLLVGPPGTGKTLLAKAIA 243 +D+ G+D K +LKK R + G PKG+LLVG GTGK+L AKAIA Sbjct: 228 EDIGGLDALKS-------WLKKRSRSFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIA 280 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 + +P + + VG SR+R++ A+ +PC++++DEID Sbjct: 281 NDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEID 328
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 63.2 bits (152), Expect = 4e-10 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 9/128 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASR 321 P + +G + KG+LL GPPGTGKTL+A+ I G ++G E + FVG Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 322 VRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 477 VRDLF A+++ ++ DEIDA+ + +NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDG 357 Query: 478 FEGNTGII 501 E ++ Sbjct: 358 VEALNNVL 365 Score = 35.0 bits (79), Expect = 0.11 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +1 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE-FVEMFVGVGASRVRDLFKKAKENAPCI 366 LL GP G+GKT LA I ++ P+ I +E + + + + +F+ A ++ I Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 367 VFVDEID 387 + +D+I+ Sbjct: 594 IILDDIE 600
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 62.8 bits (151), Expect = 5e-10 Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 10/129 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 300 Query: 319 RVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 VR LF +A+E + I+ DEIDA+ + + +NQLLT++D Sbjct: 301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAI-CKQRGSVAGNSGVHDTVVNQLLTKID 359 Query: 475 GFEGNTGII 501 G + I+ Sbjct: 360 GVDQLNNIL 368 Score = 35.0 bits (79), Expect = 0.11 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +1 Query: 88 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 267 A V +D M V+ K PE V VL+ G P +GKT LA +A + PF Sbjct: 512 APVSNLLEDGMLYVQQAKAPESSGLVS------VLVAGAPNSGKTALAAQLAKMSDFPFV 565 Query: 268 SI-SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 + S + V +R +F A + + VD ++ Sbjct: 566 KVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVE 606
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 62.4 bits (150), Expect = 7e-10 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 11/167 (6%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVV--EFLKKPERFTAVGARIPKGVLLVGPP 207 S+ K + P+ + + G+D QD + PE + + KG+LL GPP Sbjct: 260 SRRKQIINPDFKLEDLGIGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPP 319 Query: 208 GTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAP 360 GTGKTL+A+ ++ G ++G E + +VG +R+LFK K +++ Sbjct: 320 GTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDL 379 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 ++ DE+D+V + +NQLL++MDG + I+ Sbjct: 380 HVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNIL 426 Score = 38.9 bits (89), Expect = 0.008 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = +1 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASR----VRDLFKKAK 348 + +LL GPPG GKT +A +A + PF + + E VG+G R + ++F+ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVH 650 Query: 349 ENAPCIVFVDEIDAV 393 ++ ++ +D+I+ + Sbjct: 651 KSPLNVLVIDKIENI 665
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 61.6 bits (148), Expect = 1e-09 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 10/129 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 305 Query: 319 RVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 +R LF +A+E + I+ DEIDA+ + + +NQLL ++D Sbjct: 306 NIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAI-CKARGSVAGNSGVHDTVVNQLLAKID 364 Query: 475 GFEGNTGII 501 G E I+ Sbjct: 365 GVEQLNNIL 373 Score = 30.4 bits (67), Expect = 2.8 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +1 Query: 94 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 273 V E +D M V+ K E V VL+ G P +GK+ LA +A + PF + Sbjct: 519 VTELLEDGMLSVQQAKATESSGLVS------VLIEGAPNSGKSALAANLAQLSDFPFVKV 572 Query: 274 -SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 S + V +R +F A + + VD ++ Sbjct: 573 CSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVE 611
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 61.2 bits (147), Expect = 1e-09 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%) Frame = +1 Query: 82 DVAGVDEAKQDFMEVVEFLKKPERFTAV-----GARIPKGVLLVGPPGTGKTLLAKAIAG 246 ++ GVD K ++LKK + + G P+G+LL+G GTGK+L AKAIA Sbjct: 229 NIGGVDNLK-------DWLKKRKTSFTIQASNYGLPTPRGLLLIGIQGTGKSLTAKAIAT 281 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 E +P + VG SR+R + A+ +PCI+++DE+D Sbjct: 282 EWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMD 328
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 60.5 bits (145), Expect = 3e-09 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 13/132 (9%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 309 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 310 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 465 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 466 EMDGFEGNTGII 501 ++DG E I+ Sbjct: 357 KIDGVEQLNNIL 368 Score = 37.4 bits (85), Expect = 0.023 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT +A IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEID 387 V VD+I+ Sbjct: 599 CVVVDDIE 606
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 60.5 bits (145), Expect = 3e-09 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 13/132 (9%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 309 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 310 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 465 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 466 EMDGFEGNTGII 501 ++DG E I+ Sbjct: 357 KIDGVEQLNNIL 368 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEID 387 V VD+I+ Sbjct: 599 CVVVDDIE 606
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 59.7 bits (143), Expect = 4e-09 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 15/160 (9%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEV-----VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 G F+D+ G+ +F + L P +G KG+LL GPPGTGKTL+A Sbjct: 263 GFKFEDM-GIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIA 321 Query: 232 KAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA--------KENAPCIVFVDE 381 + I A P ++G E + +VG VR LF A +E+ I+ DE Sbjct: 322 RQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDE 380 Query: 382 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 +DA+ +Q +NQLL +MDG + I+ Sbjct: 381 LDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNIL 419 Score = 37.4 bits (85), Expect = 0.023 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +1 Query: 127 VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFV 303 V+ +K ER V VLL GP +GKT LA IA + PF +S V M Sbjct: 574 VQQVKNSERTRLVS------VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNE 627 Query: 304 GVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 + V +F+ + ++ ++ VDEI+ + Sbjct: 628 NARVAHVNRVFEDSYKSPLSVIVVDEIERI 657
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 59.7 bits (143), Expect = 4e-09 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 10/129 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 P +G KG+LL GPPGTGKTL+A+ I A P ++G E + +VG Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEE 321 Query: 319 RVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 +R+LFK K +E++ I+ DE+D+V + +NQLL +MD Sbjct: 322 NIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMD 380 Query: 475 GFEGNTGII 501 G + I+ Sbjct: 381 GVDQLNNIL 389 Score = 36.6 bits (83), Expect = 0.039 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 +L+ GP G+GKT LA IA ++G PF IS +E M + + + F+ A ++ Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 364 IVFVDEIDAV 393 I+ +D ++ + Sbjct: 620 ILVIDSLETL 629
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 59.3 bits (142), Expect = 6e-09 Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 17/178 (9%) Frame = +1 Query: 19 LGFGQSKAKFQMEPNTGVTFDD--VAGVDEAKQD-FMEVVEF-LKKPERFTAVGARIPKG 186 +G ++K Q N F+ + G+D+ D F F + PE +G KG Sbjct: 196 IGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKG 255 Query: 187 VLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 351 +LL GPPG GKTLLA+ I A E V ++G E + +VG + +R LF A+E Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Query: 352 --------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII 501 + I+ DEIDA+ + +NQLL+++DG E I+ Sbjct: 312 EQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNIL 368 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEID 387 V VD+I+ Sbjct: 599 CVVVDDIE 606
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 49.3 bits (116), Expect = 6e-06 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Frame = +1 Query: 79 DDVAGVDEAKQDFMEVVEFL---KKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 +DV D+AK+ + + +KP++ + LL GPPG GKT L +AIA E Sbjct: 22 EDVVNQDQAKKILVPWFKAWLEGRKPDK---------RAALLYGPPGVGKTSLVEAIASE 72 Query: 250 AGVPFFSISGSEF-----VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 + ++ S++ +E VG ASR R +FK+ ++ +DE+D + Sbjct: 73 FNLEMIELNASDYRRRSDIERIVG-AASRKRSMFKRG-----VVILLDEVDGI 119
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 48.9 bits (115), Expect = 8e-06 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + +DVAG ++ KQ +E +E + +G + K +LL GPPG+GKT LA AIA + Sbjct: 12 SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63 Query: 253 GVPFFSISGS-----EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 ++ S + + VG A+ K+ ++ +DE+D + Sbjct: 64 AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL 109
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 48.9 bits (115), Expect = 8e-06 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 T D+V ++AKQ + V KK + K +LL GPPGTGKT A+A E Sbjct: 41 TLDEVENQEQAKQILRDYVINYKKKYK--------GKALLLYGPPGTGKTSSVYALANEL 92 Query: 253 GVPFFSISGSE-----FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 G ++ S+ + VG AS+ + LF K + I+ VDE+D + Sbjct: 93 GYEVLEVNASDERDAIHIHHIVG-EASKGKPLFHKGR-----IILVDEVDGL 138
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 48.1 bits (113), Expect = 1e-05 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +1 Query: 85 VAGVDEAKQDFMEVV---EFLKKPERFTAVGARIPKG-VLLVGPPGTGKTLLAKAIAGEA 252 V G D+AK+ F+ V + + ++ + G I K +++VGP GTGKTLLA+ IA Sbjct: 77 VIGQDDAKR-FLSVAVYNHYKRLLQQEDSDGVEIEKSNIIMVGPTGTGKTLLARTIAKML 135 Query: 253 GVPFFSISGSEFVEM-FVGVGASRVRDLFKKA-----KENAPCIVFVDEIDAVXXXXXXX 414 VPF + + E +VG + +A K+ IVF+DEID + Sbjct: 136 HVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVKQAERGIVFIDEIDKIARKSDNP 195 Query: 415 XXXXNDEREQTLNQLLTEMDG 477 + E LL ++G Sbjct: 196 SITRDVSGEGVQQGLLKLLEG 216
>HSLU_OCEIH (Q8CXH1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 465 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKA 345 +PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL + A Sbjct: 50 VPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVEMA 108
>HSLU_RHOPA (Q6ND03) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 433 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGASR-VRDLFKKA 345 +PK +L++GP G GKT +A+ +A AG PF + ++F E+ +VG + +RDL + A Sbjct: 49 LPKNILMIGPTGVGKTEIARRLAKLAGAPFLKVEATKFTEVGYVGRDVEQIIRDLVEVA 107
>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 47.4 bits (111), Expect = 2e-05 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 11/137 (8%) Frame = +1 Query: 10 GFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGV 189 G P G +SK K + V D G+D+ K+ +VE+L R + + I + Sbjct: 303 GLPWG-KKSKIKTDLNHAEKVLDTDHFGLDKVKE---RIVEYLAVQARSSKIKGPI---L 355 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFF-----------SISGSEFVEMFVGVGASRVRDLF 336 LVGPPG GKT LAK+IA G + I G ++G +V Sbjct: 356 CLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHR--RTYIGSMPGKVVQSM 413 Query: 337 KKAKENAPCIVFVDEID 387 KKAK++ P + +DEID Sbjct: 414 KKAKKSNP-LFLLDEID 429
>HSLU_BACSU (P39778) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 +PK +L++GP G GKT +A+ IA +G PF I ++F E+ +VG S VRDL Sbjct: 51 VPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDL 105
>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 516 Score = 47.0 bits (110), Expect = 3e-05 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%) Frame = +1 Query: 82 DVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVP 261 DVAG ++ K+ +E K E PK +LLVGPPG GKT LA A+A + G Sbjct: 15 DVAGHEKVKEKLKTWIESYLKGET--------PKPILLVGPPGCGKTTLAYALANDYGFE 66 Query: 262 FFSISGSE-----FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 ++ S+ ++ VG A+ KK ++ +DE+D + Sbjct: 67 VIELNASDKRNSSAIKKVVGHAATSSSIFGKK------FLIVLDEVDGI 109
>CLPX_DEIRA (Q9RSZ6) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 403 Score = 46.6 bits (109), Expect = 4e-05 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 7/138 (5%) Frame = +1 Query: 85 VAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKG-VLLVGPPGTGKTLLAKAIAGEAGVP 261 V G DEAK+ V + R + A + K +LL+GP GTGKTLLA+++A VP Sbjct: 74 VIGQDEAKKAL--AVAVVSHYHRLSNPDAGLQKSNILLIGPTGTGKTLLAQSLAEMLEVP 131 Query: 262 FFSISGSEFVEM-FVGVGASRVRDLFKKAKENAPC-----IVFVDEIDAVXXXXXXXXXX 423 F + E +VG V +A E I++VDEID + Sbjct: 132 FAIADATTLTEAGYVGDDVENVIVRLLQAAEYDVAAAERGIIYVDEIDKIARKSEGTSIT 191 Query: 424 XNDEREQTLNQLLTEMDG 477 + E LL ++G Sbjct: 192 RDVSGEGVQQALLKIIEG 209
>CLPX_NEIMB (Q9JYY3) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 414 Score = 46.6 bits (109), Expect = 4e-05 Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Frame = +1 Query: 79 DDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP---KGVLLVGPPGTGKTLLAKAIAGE 249 D V G ++AK+ V K R GA + +LL+GP G+GKTLLA+++A + Sbjct: 76 DHVIGQEQAKKALAVSVYNHYKRLRHPKAGANVELSKSNILLIGPTGSGKTLLAQSLARK 135 Query: 250 AGVPFFSISGSEFVEM-FVGVGASR-VRDLFKK----AKENAPCIVFVDEIDAVXXXXXX 411 VPF + E +VG + + L K ++ IV++DEID + Sbjct: 136 LDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDN 195 Query: 412 XXXXXNDEREQTLNQLLTEMDG 477 + E LL ++G Sbjct: 196 PSITRDVSGEGVQQALLKLIEG 217
>HSLU_NITEU (Q82SP6) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 443 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKAKE 351 PK +L++GP G GKT +A+ +A A PF I ++F E+ +VG S +RDL + A + Sbjct: 50 PKNILMIGPTGVGKTEIARRLARLANAPFIKIEATKFTEVGYVGRDVDSIIRDLVESAIK 109 Query: 352 NA 357 A Sbjct: 110 QA 111
>CLPX_DESVH (Q72CE7) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 417 Score = 45.8 bits (107), Expect = 6e-05 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC- 363 +LL+GP G+GKTLLAK +A VPF + E G V ++ + +NA Sbjct: 113 ILLIGPSGSGKTLLAKTLARVLKVPFAIADATTLTE--AGYVGEDVENILVQLLQNADYD 170 Query: 364 -------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 489 I+++DEID + + E LL ++G E N Sbjct: 171 IEAAAKGIIYIDEIDKISRKGDGPSITRDVSGEGVQQALLKIIEGTEAN 219
>HSLU_BARQU (Q6G0P9) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 436 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGASR-VRDLFKKA 345 +PK +L++GP G GKT +A+ +A AG PF + ++F E+ +VG + +RDL + A Sbjct: 50 MPKNILMIGPTGVGKTGIARRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEIA 108
>HSLU_BARHE (Q6G5G0) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 436 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGASR-VRDLFKKA 345 +PK +L++GP G GKT +A+ +A AG PF + ++F E+ +VG + +RDL + A Sbjct: 50 MPKNILMIGPTGVGKTGIARRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEIA 108
>HSLU_THEMA (Q9WYZ2) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 463 Score = 45.8 bits (107), Expect = 6e-05 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 +PK +L++GP G GKT +A+ +A +G PF + + F E+ +VG S +RDL Sbjct: 52 LPKNILMIGPTGVGKTEIARRLAQLSGSPFLKVEATRFTEVGYVGKNVDSMIRDL 106
>HSLU_BACSK (Q5WFQ1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 463 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKA 345 PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL + + Sbjct: 51 PKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVESS 108
>HSLU_GEOKA (Q5L0N1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 465 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 +PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL Sbjct: 51 MPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDL 105
>HSLU_STAAN (P63797) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL Sbjct: 54 PKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTELGYVGRDVESMVRDL 107
>HSLU_STAAM (P63796) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL Sbjct: 54 PKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTELGYVGRDVESMVRDL 107
>HSLU_STAAW (Q8NWZ7) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 45.4 bits (106), Expect = 8e-05 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL Sbjct: 54 PKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDL 107
>HSLU_STAAS (Q6G9V9) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 45.4 bits (106), Expect = 8e-05 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +1 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDL 333 PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL Sbjct: 54 PKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDL 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,473,154 Number of Sequences: 219361 Number of extensions: 1473168 Number of successful extensions: 11326 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10972 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
