ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13m05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
3emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
4emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
5dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone... 58 3e-05
6ref|XM_390740.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.52
7gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 patho... 44 0.52
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
9dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
10dbj|AK069536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
11dbj|AK066485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
12emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chro... 44 0.52
13gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, compl... 42 2.0
14gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 42 2.0
15gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.0
16emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23,... 42 2.0
17gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, co... 40 8.1
18gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, com... 40 8.1
19gb|DQ149611.1| Human adenovirus type 31 hexon protein gene, comp... 40 8.1
20gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
21gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
22gb|AC117748.13| Mus musculus chromosome 5, clone RP24-317A24, co... 40 8.1
23gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, com... 40 8.1
24gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome... 40 8.1
25emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 40 8.1
26emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5... 40 8.1
27emb|Y17253.1|HAY17253 Human adenovirus type 31 hexon gene (partial) 40 8.1
28gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.1
29dbj|AK124758.1| Homo sapiens cDNA FLJ42768 fis, clone BRAWH3003522 40 8.1
30gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genom... 40 8.1
31gb|AF161320.1|AF161320 Pseudomonas aeruginosa NRAMP protein MntH... 40 8.1
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
33gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome... 40 8.1
34gb|AE004516.1| Pseudomonas aeruginosa PAO1, section 77 of 529 of... 40 8.1
35gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, comp... 40 8.1
36gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complet... 40 8.1
37dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:... 40 8.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                            
Query: 246      aggaatcttttaccatattatcaaccgaggaagagagaagattatatgattggagcttgg 305
                ||||||||||||||||| |||  ||||||||||||||||||||||| |||||||| ||||
Sbjct: 18959729 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 18959670

                                                                            
Query: 306      cgagaaatgggcagcctgaacgatatgtttggccttttgaagttgaccccatggagttgg 365
                | |||| |||  ||||||| |||||||| |||||||| ||||| || ||||||||| | |
Sbjct: 18959669 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 18959610

                                  
Query: 366      caccagatcctcctaagg 383
                ||||||||||||| ||||
Sbjct: 18959609 caccagatcctccaaagg 18959592



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                          
Query: 36       cgcggcctccctactcgctcatctccgccgccaacgtgcagaaggcgatgcgcggcct 93
                ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 18961245 cgcggccgccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcct 18961188



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 201      aaggactggaagaagaggaaatcagcaaggaacatgacct 240
                ||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 18959867 aaggattggaagaagaggaaatcaacaaggagcatgacct 18959828



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 109      tgatcactatgggaggcttggaattaccagattagcgtcaaccgatgaggt 159
                |||||| |||||||||||||| || ||||||| ||| || |||||||||||
Sbjct: 18960808 tgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggt 18960758



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                            
Query: 389      gaagatgagtttcctacaaagcttgtcggctacttcttgttgacatggttcataatttct 448
                ||||||||||| || |||||||| || |||||||| ||  || ||||||||||| | |||
Sbjct: 18959390 gaagatgagttcccaacaaagctggttggctactttttcctggcatggttcatactatct 18959331

                       
Query: 449      gtagcct 455
                || ||||
Sbjct: 18959330 gttgcct 18959324
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                            
Query: 246      aggaatcttttaccatattatcaaccgaggaagagagaagattatatgattggagcttgg 305
                ||||||||||||||||| |||  ||||||||||||||||||||||| |||||||| ||||
Sbjct: 18885956 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 18885897

                                                                            
Query: 306      cgagaaatgggcagcctgaacgatatgtttggccttttgaagttgaccccatggagttgg 365
                | |||| |||  ||||||| |||||||| |||||||| ||||| || ||||||||| | |
Sbjct: 18885896 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 18885837

                                  
Query: 366      caccagatcctcctaagg 383
                ||||||||||||| ||||
Sbjct: 18885836 caccagatcctccaaagg 18885819



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                          
Query: 36       cgcggcctccctactcgctcatctccgccgccaacgtgcagaaggcgatgcgcggcct 93
                ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 18887472 cgcggccgccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcct 18887415



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 201      aaggactggaagaagaggaaatcagcaaggaacatgacct 240
                ||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 18886094 aaggattggaagaagaggaaatcaacaaggagcatgacct 18886055



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 109      tgatcactatgggaggcttggaattaccagattagcgtcaaccgatgaggt 159
                |||||| |||||||||||||| || ||||||| ||| || |||||||||||
Sbjct: 18887035 tgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggt 18886985



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                            
Query: 389      gaagatgagtttcctacaaagcttgtcggctacttcttgttgacatggttcataatttct 448
                ||||||||||| || |||||||| || |||||||| ||  || ||||||||||| | |||
Sbjct: 18885617 gaagatgagttcccaacaaagctggttggctactttttcctggcatggttcatactatct 18885558

                       
Query: 449      gtagcct 455
                || ||||
Sbjct: 18885557 gttgcct 18885551
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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 246   aggaatcttttaccatattatcaaccgaggaagagagaagattatatgattggagcttgg 305
             ||||||||||||||||| |||  ||||||||||||||||||||||| |||||||| ||||
Sbjct: 10650 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 10709

                                                                         
Query: 306   cgagaaatgggcagcctgaacgatatgtttggccttttgaagttgaccccatggagttgg 365
             | |||| |||  ||||||| |||||||| |||||||| ||||| || ||||||||| | |
Sbjct: 10710 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 10769

                               
Query: 366   caccagatcctcctaagg 383
             ||||||||||||| ||||
Sbjct: 10770 caccagatcctccaaagg 10787



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                      
Query: 36   cgcggcctccctactcgctcatctccgccgccaacgtgcagaaggcgatgcgcggcct 93
            ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9134 cgcggccgccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcct 9191



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 201   aaggactggaagaagaggaaatcagcaaggaacatgacct 240
             ||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 10512 aaggattggaagaagaggaaatcaacaaggagcatgacct 10551



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 109  tgatcactatgggaggcttggaattaccagattagcgtcaaccgatgaggt 159
            |||||| |||||||||||||| || ||||||| ||| || |||||||||||
Sbjct: 9571 tgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggt 9621



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 389   gaagatgagtttcctacaaagcttgtcggctacttcttgttgacatggttcataatttct 448
             ||||||||||| || |||||||| || |||||||| ||  || ||||||||||| | |||
Sbjct: 10989 gaagatgagttcccaacaaagctggttggctactttttcctggcatggttcatactatct 11048

                    
Query: 449   gtagcct 455
             || ||||
Sbjct: 11049 gttgcct 11055
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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 246   aggaatcttttaccatattatcaaccgaggaagagagaagattatatgattggagcttgg 305
             ||||||||||||||||| |||  ||||||||||||||||||||||| |||||||| ||||
Sbjct: 55846 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 55787

                                                                         
Query: 306   cgagaaatgggcagcctgaacgatatgtttggccttttgaagttgaccccatggagttgg 365
             | |||| |||  ||||||| |||||||| |||||||| ||||| || ||||||||| | |
Sbjct: 55786 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 55727

                               
Query: 366   caccagatcctcctaagg 383
             ||||||||||||| ||||
Sbjct: 55726 caccagatcctccaaagg 55709



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                       
Query: 36    cgcggcctccctactcgctcatctccgccgccaacgtgcagaaggcgatgcgcggcct 93
             ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 57362 cgcggccgccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcct 57305



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 201   aaggactggaagaagaggaaatcagcaaggaacatgacct 240
             ||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 55984 aaggattggaagaagaggaaatcaacaaggagcatgacct 55945



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 109   tgatcactatgggaggcttggaattaccagattagcgtcaaccgatgaggt 159
             |||||| |||||||||||||| || ||||||| ||| || |||||||||||
Sbjct: 56925 tgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggt 56875



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 389   gaagatgagtttcctacaaagcttgtcggctacttcttgttgacatggttcataatttct 448
             ||||||||||| || |||||||| || |||||||| ||  || ||||||||||| | |||
Sbjct: 55507 gaagatgagttcccaacaaagctggttggctactttttcctggcatggttcatactatct 55448

                    
Query: 449   gtagcct 455
             || ||||
Sbjct: 55447 gttgcct 55441
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>dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26D17, TM0154,
            complete sequence
          Length = 85795

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 275  gaagagagaagattatatgattggagcttggcgagaa 311
            ||||| |||||||||||||||||||||||||| ||||
Sbjct: 9489 gaagaaagaagattatatgattggagcttggccagaa 9525
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>ref|XM_390740.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10564.1)
            partial mRNA
          Length = 8961

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   ccttgcaattacaggtgctgat 112
            ||||||||||||||||||||||
Sbjct: 8802 ccttgcaattacaggtgctgat 8823
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>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE,
            complete sequence
          Length = 42001

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 275  gaagagagaagattatatgatt 296
            ||||||||||||||||||||||
Sbjct: 3961 gaagagagaagattatatgatt 3982
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 8       cgacgtcgccggcggcgctgccaatt 33
               |||||||||||||||||| |||||||
Sbjct: 2039612 cgacgtcgccggcggcgccgccaatt 2039587
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 8     cgacgtcgccggcggcgctgccaatt 33
             |||||||||||||||||| |||||||
Sbjct: 60474 cgacgtcgccggcggcgccgccaatt 60449
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>dbj|AK069536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022B22, full
           insert sequence
          Length = 1296

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 8   cgacgtcgccggcggcgctgccaatt 33
           |||||||||||||||||| |||||||
Sbjct: 716 cgacgtcgccggcggcgccgccaatt 741
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>dbj|AK066485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J24, full
           insert sequence
          Length = 1693

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 8   cgacgtcgccggcggcgctgccaatt 33
           |||||||||||||||||| |||||||
Sbjct: 809 cgacgtcgccggcggcgccgccaatt 834
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>emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chromosome 17, complete
              sequence
          Length = 219471

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 265    atcaaccgaggaagagagaaga 286
              ||||||||||||||||||||||
Sbjct: 192317 atcaaccgaggaagagagaaga 192338
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>gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, complete sequence
          Length = 137605

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   tgtttggccttttgaagttga 351
             |||||||||||||||||||||
Sbjct: 89268 tgtttggccttttgaagttga 89248
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     tgtttggccttttgaagttga 351
               |||||||||||||||||||||
Sbjct: 1708055 tgtttggccttttgaagttga 1708035
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 4       gaaccgacgtcgccggcggcg 24
               |||||||||||||||||||||
Sbjct: 2291736 gaaccgacgtcgccggcggcg 2291716
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>emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23, complete sequence
          Length = 182212

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ggaaatcagcaaggaacatga 237
              |||||||||||||||||||||
Sbjct: 166782 ggaaatcagcaaggaacatga 166762
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>gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, complete sequence
          Length = 145902

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   aaggactggaagaagaggaa 220
             ||||||||||||||||||||
Sbjct: 33087 aaggactggaagaagaggaa 33068
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>gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, complete sequence
          Length = 169078

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    aaggactggaagaagaggaa 220
              ||||||||||||||||||||
Sbjct: 150366 aaggactggaagaagaggaa 150347
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>gb|DQ149611.1| Human adenovirus type 31 hexon protein gene, complete cds
          Length = 2769

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  tttgaagttgaccccatgga 360
            ||||||||||||||||||||
Sbjct: 2623 tttgaagttgaccccatgga 2642
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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      accgacgtcgccggcggcgc 25
              ||||||||||||||||||||
Sbjct: 161308 accgacgtcgccggcggcgc 161289
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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0040E06, complete sequence
          Length = 160907

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     accgacgtcgccggcggcgc 25
             ||||||||||||||||||||
Sbjct: 13818 accgacgtcgccggcggcgc 13799
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>gb|AC117748.13| Mus musculus chromosome 5, clone RP24-317A24, complete sequence
          Length = 180438

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 563  taattaattattcacatgga 582
            ||||||||||||||||||||
Sbjct: 5768 taattaattattcacatgga 5749
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>gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, complete sequence
          Length = 134271

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   atctttaattaattattcac 577
             ||||||||||||||||||||
Sbjct: 56447 atctttaattaattattcac 56466
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>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence
          Length = 221263

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tggaagaagaggaaatcagc 226
              ||||||||||||||||||||
Sbjct: 204048 tggaagaagaggaaatcagc 204029
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>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ggactggaagaagaggaaat 222
             ||||||||||||||||||||
Sbjct: 90514 ggactggaagaagaggaaat 90533
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>emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 142723

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   atatgaatctttaattaattattc 575
             |||||||||||||||| |||||||
Sbjct: 48811 atatgaatctttaatttattattc 48834
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>emb|Y17253.1|HAY17253 Human adenovirus type 31 hexon gene (partial)
          Length = 790

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 tttgaagttgaccccatgga 360
           ||||||||||||||||||||
Sbjct: 668 tttgaagttgaccccatgga 687
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     caagcaaggactggaagaag 215
               ||||||||||||||||||||
Sbjct: 1065407 caagcaaggactggaagaag 1065388
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>dbj|AK124758.1| Homo sapiens cDNA FLJ42768 fis, clone BRAWH3003522
          Length = 3365

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 552  atatgaatctttaattaattattc 575
            |||||||||||||||| |||||||
Sbjct: 1895 atatgaatctttaatttattattc 1918
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>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete
             sequence
          Length = 91854

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   taattaattattcacatgga 582
             ||||||||||||||||||||
Sbjct: 64910 taattaattattcacatgga 64891
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>gb|AF161320.1|AF161320 Pseudomonas aeruginosa NRAMP protein MntH2 (mntH2) gene, complete
           cds
          Length = 1560

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   accgacgtcgccggcggcgc 25
           ||||||||||||||||||||
Sbjct: 240 accgacgtcgccggcggcgc 259
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        accgacgtcgccggcggcgc 25
                ||||||||||||||||||||
Sbjct: 28081143 accgacgtcgccggcggcgc 28081124
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>gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome 9, complete sequence
          Length = 253762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 551   tatatgaatctttaattaattatt 574
             ||||||||| ||||||||||||||
Sbjct: 86761 tatatgaatttttaattaattatt 86738
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>gb|AE004516.1| Pseudomonas aeruginosa PAO1, section 77 of 529 of the complete genome
          Length = 10476

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    accgacgtcgccggcggcgc 25
            ||||||||||||||||||||
Sbjct: 2862 accgacgtcgccggcggcgc 2843
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>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence
          Length = 163565

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 563    taattaattattcacatgga 582
              ||||||||||||||||||||
Sbjct: 140243 taattaattattcacatgga 140224
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>gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complete sequence
          Length = 209929

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tggaagaagaggaaatcagc 226
             ||||||||||||||||||||
Sbjct: 11103 tggaagaagaggaaatcagc 11084
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>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b,
            complete sequence
          Length = 56086

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  aatctttaattaattattca 576
            ||||||||||||||||||||
Sbjct: 1599 aatctttaattaattattca 1618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,657,522
Number of Sequences: 3902068
Number of extensions: 5657522
Number of successful extensions: 117083
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116700
Number of HSP's gapped (non-prelim): 383
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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