>M3KSL_DROME (Q95UN8) Mitogen-activated protein kinase kinase kinase (EC|
           2.7.11.25) (Mixed lineage kinase) (dMLK) (Protein
           slipper)
          Length = 1161

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = -2

Query: 261 SLSLCRIQLPHQGTPSYSGFPNRLELFALEFWPLRTGTRGRASVHLPWGNTPSHRR*RSA 82
           +++  R +    G+PS+SG         L    L  G +G+      WG +  H+R RS 
Sbjct: 512 TITAVRDKAEQPGSPSFSG---------LRIVALTDGHKGKT-----WGPSTMHQRERSL 557

Query: 81  MPARTAGEAPSPP 43
           +P++ +G  P  P
Sbjct: 558 LPSQLSGGQPEWP 570

>TKT1_YEAST (P23254) Transketolase 1 (EC 2.2.1.1) (TK 1)|
          Length = 679

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +3

Query: 174 PEQRALVDLET--HYTKEYLDEEVESCTRRAILYKEYVKGISSTGMQCNCGFEGQINACW 347
           P++  +V  E   HY K  L   VE+  +   L+ EY K     G +      GQ+ A W
Sbjct: 282 PDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLSGQLPANW 341

Query: 348 THKVTT 365
             K+ T
Sbjct: 342 ESKLPT 347

>EZY3_CHLRE (Q08356) Ezy-1 protein (Fragment)|
          Length = 297

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +3

Query: 12  PSMGAMISCKLAAMAPHRLSSLALLNV-----TGGGMECFPKVDGQMLSLAFRFLRARTP 176
           P++  +++C   AMAP +  +LAL+ +     TGGG      VDG +       L+   P
Sbjct: 175 PTLALVLACGYLAMAPRQYRALALVPMILPGKTGGG------VDGALTREGLSLLKKLRP 228

Query: 177 EQRALVDLETHY 212
               L D +  +
Sbjct: 229 GISGLADKDKQW 240

>ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferase component of|
           acetoin cleaving system (EC 2.3.1.12) (Acetoin
           dehydrogenase E2 component) (Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system)
          Length = 370

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 15  SMGAMISCKLAAMAPHRLSSLALLNVTGGGMECFPKVDGQML 140
           SMG  +S  +A +AP R++SL+L+   G G      ++GQ L
Sbjct: 207 SMGGAVSLNVAGLAPQRVASLSLIASAGLG----EAINGQYL 244

>DHN2_HORVU (P12952) Dehydrin DHN2 (B9)|
          Length = 143

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 125 YLGETLHPTAGDVQQCQRGQPVRRHRRQFAGNHGTHG 15
           Y G+T H T   V++   GQPV  H     G  GTHG
Sbjct: 3   YQGQTGHATTDKVEEY--GQPVAGHGGATGGPTGTHG 37

>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = +2

Query: 47   GDGASPAVLAGIAERHRRW-DGV--FPQGRWTDALPRVPVLKGQNSRAKSSSRFGNPLYE 217
            GD   P +     E   R  DGV  +P    TD LP +P   GQ      +   G P Y 
Sbjct: 967  GDNGLPGLEGECGEEGSRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYR 1026

Query: 218  GVP 226
            G P
Sbjct: 1027 GQP 1029

>PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein)|
          Length = 567

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 50  DGASPAVLAGIAERHRRWDGVFPQGRWTDALPRVPVLKGQNS 175
           D ASPA  +G   R R W+G     RWTD L  +  +K  +S
Sbjct: 17  DPASPAPTSG--PRPRLWEGQDVLARWTDGLLYLGTIKKVDS 56

>ENGB_AGRT5 (Q8UIB4) Probable GTP-binding protein engB|
          Length = 217

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 57  PHRLSSLALLNVTGGGMECFPK--VDGQMLSLAFRFLRARTPEQRALVDLETHYTKEYLD 230
           P  L  +AL+++ G G    PK  VD     L F +LR R   +R  V +++ +  +  D
Sbjct: 85  PGDLPPMALVDMPGYGYAQAPKDHVDA-WTKLVFDYLRGRATLKRVYVLIDSRHGIKKND 143

Query: 231 EEVESCTRRAILYKEYV 281
           EEV S   +A +  + V
Sbjct: 144 EEVLSLLDKAAVSYQVV 160

>GI24_MOUSE (Q9D659) Platelet receptor Gi24 precursor|
          Length = 309

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 95  GDVQQCQRGQPVRRHRRQFAGNHGTH 18
           G+VQ C+  +P+R    Q   +HG+H
Sbjct: 78  GEVQMCKEHRPIRNFTLQHLQHHGSH 103

>YBLH_SCHPO (Q10341) Hypothetical protein C106.17c in chromosome II|
          Length = 504

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 15  SMGAMISCKLAAMAPHRLSSLALLNVTGGGMECFPKVDGQMLSLAFRF 158
           S+G M S  L A+APHR+  +A ++   GG    P       S+A RF
Sbjct: 221 SLGGMQSLTLGALAPHRVGRIASIS---GGARSHP------YSIALRF 259

>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like
            proteinase (EC 3.4
          Length = 6758

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
 Frame = +3

Query: 219  EYLDEEVESCTRR---------AILYKEYVKGISSTGMQCNCGFEGQINACWTHKVTTK 368
            ++LD  V+ CTR+           +  +Y+  +  + + CN  F G++ A     +T K
Sbjct: 1548 KHLDNNVQRCTRKLNRLMCDIVCTIPADYILPLVLSSLTCNVSFVGELKAAEAKVITIK 1606

>PHF1_MOUSE (Q9Z1B8) PHD finger protein 1 (PHF1 protein) (T-complex|
           testis-expressed 3) (Polycomblike 1) (mPCl1)
          Length = 559

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 50  DGASPAVLAGIAERHRRWDGVFPQGRWTDALPRVPVLKGQNS 175
           D ASPA  +G   R R W+G     RWTD L  +  +K  +S
Sbjct: 17  DPASPAPTSG--PRPRLWEGQDVLARWTDGLLYLGTIKKVDS 56

>Y25K_BNYVF (P19229) RNA-3 hypothetical 24.7 kDa protein|
          Length = 219

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
 Frame = -2

Query: 294 MICLSHIPYTGSLSLCRIQL---------PHQGTPSYSGFPNRLE 187
           ++C  H PY G  +LCR+ L         P  G+  +   P RL+
Sbjct: 64  LLCAYHRPYCGFRALCRVMLCSLPRLCDIPINGSRDFVADPTRLD 108

>PLS1_HUMAN (O15162) Phospholipid scramblase 1 (PL scramblase 1)|
           (Ca(2+)-dependent phospholipid scramblase 1)
           (Erythrocyte phospholipid scramblase) (MmTRA1b)
          Length = 318

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
 Frame = -2

Query: 228 QGTPSYSGFPNRLELFALEFWPLRTGTRGRASVHLPWGNTPSHRR*RSAMPARTAG---- 61
           QG P YSG+P       + + P   G  G      P  N P + +     P   AG    
Sbjct: 31  QGPPGYSGYPGP----QVSYPPPPAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWM 86

Query: 60  EAPSPPV 40
            AP PP+
Sbjct: 87  PAPQPPL 93

>LACR_STAXY (O33813) Lactose operon transcription activator|
          Length = 279

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 125 YLGETLHPTAGDVQQCQRGQPV 60
           Y GET H TAGD+   +RG  V
Sbjct: 53  YAGETYHLTAGDIFLLERGMEV 74

>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
           transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = -1

Query: 208 WVSKSTRALCSGVLALKNRNARESICPSTLGKHSIPPPVTFSNASEDSR*GAIAASLQEI 29
           W  K T+++      L N + + +  P T+      PPV+ S   ++S    + A+ ++ 
Sbjct: 767 WTEKPTKSVIESRTKLLNESKKNTTKPETIPDMEDSPPVSDSEEQQES----VRAAPEKS 822

Query: 28  MAPM 17
            AP+
Sbjct: 823 AAPL 826

>ZN561_HUMAN (Q8N587) Zinc finger protein 561|
          Length = 486

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
 Frame = +3

Query: 171 TPEQRALVD-----------LETHYTKEYLDEEVESCTRRAILYKEYVKGISSTGMQCNC 317
           TPE+ AL+D           LE +     ++ E++  T+R+ L + ++K    +G+Q   
Sbjct: 51  TPEEWALLDTTEKYLYRDVMLENYMNLASVEWEIQPRTKRSSLQQGFLKNQIFSGIQMTR 110

Query: 318 GFEG 329
           G+ G
Sbjct: 111 GYSG 114

>PRXH_BPMD2 (O64252) Putative non-heme haloperoxidase (EC 1.11.1.-)|
          Length = 278

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 15  SMGAMISCKLAAMAPHRLSSLALLNVTGGGMECFPKVDGQMLSLAFR 155
           SMG  +  ++AA  PHR+++  LL+   G         G   +LAFR
Sbjct: 97  SMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYATLAFR 143

>ACOC_RALEU (P27747) Dihydrolipoyllysine-residue acetyltransferase component of|
           acetoin cleaving system (EC 2.3.1.12) (Acetoin
           dehydrogenase E2 component) (Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system)
           (Fast-migrating protein) (
          Length = 373

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 15  SMGAMISCKLAAMAPHRLSSLALLNVTGGG 104
           SMG  ++ +LA  AP R+ S+AL++  G G
Sbjct: 208 SMGGGVAAQLAVDAPQRVLSVALVSPVGFG 237

>TOXR_VIBCH (P15795) Cholera toxin transcriptional activator|
          Length = 294

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = -1

Query: 298 VDDMPFTYSLYRIALLVQDSTSSSRYSFV*WVSKSTRALCSGVLALKNRNARESICPSTL 119
           VDD   T ++  +  +++DST S +Y  V  V K    L + V  ++   ARES      
Sbjct: 83  VDDSSLTQAISTLRKMLKDSTKSPQY--VKTVPKRGYQLIARVETVEEEMARES-----E 135

Query: 118 GKHSIPPPVTFSNASEDS 65
             H I  P + +  +E S
Sbjct: 136 AAHDISQPESVNEYAESS 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,163,517
Number of Sequences: 219361
Number of extensions: 1275879
Number of successful extensions: 3643
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)