ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precu... 51 1e-06
2SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor... 49 5e-06
3SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor 45 4e-05
4EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1... 45 6e-05
5SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor... 44 1e-04
6SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor ... 44 1e-04
7SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor 44 2e-04
8SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 44 2e-04
9SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor 41 0.001
10PADI6_MOUSE (Q8K3V4) Protein-arginine deiminase type-6 (EC 3.5.3... 29 4.1
11HST4_SCHPO (Q9UR39) NAD-dependent deacetylase hst4 (EC 3.5.1.-) ... 28 9.2

>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC|
           2.7.11.1)
          Length = 817

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = +2

Query: 14  TGVA-AVILDTGNLVLRSSNGTVIWQSFDHPTDTLLP 121
           TGV  A +LDTGNLV+  S G  +WQSFD PTDT LP
Sbjct: 130 TGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLP 166



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>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)|
           (Fragment)
          Length = 434

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +LD GN V+R SN       +WQSFD+PTDTLLP M+
Sbjct: 130 VVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMK 170



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>SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor|
          Length = 435

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +L  GN VLR SN       +WQSFD+PTDTLLP M+
Sbjct: 130 VVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMK 170



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>EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1 precursor|
           (52/54-kDa medium protein)
          Length = 389

 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 23/39 (58%), Positives = 26/39 (66%)
 Frame = +2

Query: 8   GVTGVAAVILDTGNLVLRSSNGTVIWQSFDHPTDTLLPG 124
           GV G+   IL  GN+VL  S G  +WQSFD PTDTLL G
Sbjct: 133 GVVGLK--ILPNGNMVLYDSKGKFLWQSFDTPTDTLLVG 169



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>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)|
           (Fragment)
          Length = 434

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +L  GN V+R SN       +WQSFD PTDTLLP M+
Sbjct: 128 VVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMK 168



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>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)|
          Length = 436

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +L  GN V+R S+       +WQSFD+PTDTLLP M+
Sbjct: 131 VVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMK 171



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>SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor|
          Length = 444

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGTVI----WQSFDHPTDTLLPGMR 130
           V A +L  GN VLR S  T +    WQSFD+P DTLLP M+
Sbjct: 134 VTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMK 174



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>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +L  GN V+R S+       +WQSFD+PTDTLLP M+
Sbjct: 130 VVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMK 170



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>SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor|
          Length = 444

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VAAVILDTGNLVLRSSNGT----VIWQSFDHPTDTLLPGMR 130
           V A +L  GN VLR S        +WQSFD+P DTLLP M+
Sbjct: 134 VTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMK 174



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>PADI6_MOUSE (Q8K3V4) Protein-arginine deiminase type-6 (EC 3.5.3.15)|
           (Protein-arginine deiminase type VI) (Peptidylarginine
           deiminase VI) (Arginine deiminase-like protein) (Egg and
           embryo anbundant PAD) (ePAD)
          Length = 682

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 11  VTGVAAVILDTGNLVLRSSNGTVIWQSFDHPTDTLL 118
           + G   +++   + V+     TV+W+S +HPT  L+
Sbjct: 42  IRGSPRILIHISSSVIAGKEDTVVWRSMNHPTVALV 77



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>HST4_SCHPO (Q9UR39) NAD-dependent deacetylase hst4 (EC 3.5.1.-) (Homologous to|
           SIR2 protein 4)
          Length = 415

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 11  VTGVAAVILDTGNLVLRSSNGTVIWQSFDHPTDTLL 118
           + GV  +I +  N V     G VIW ++D PT   L
Sbjct: 278 IPGVKRIIKEMSNCV-HKQKGNVIWLNYDEPTKDFL 312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,279,422
Number of Sequences: 219361
Number of extensions: 336997
Number of successful extensions: 996
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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