ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13l08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
2dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
3dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
4ref|NM_183835.1| Oryza sativa (japonica cultivar-group), predic... 115 2e-22
5ref|NM_100129.2| Arabidopsis thaliana unknown protein AT1G02475 ... 50 0.010
6gb|AY063040.1| Arabidopsis thaliana unknown protein (At1g02475) ... 50 0.010
7gb|AF370292.1| Arabidopsis thaliana unknown protein (At1g02475) ... 50 0.010
8gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14... 50 0.010
9dbj|AK176092.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 50 0.010
10ref|NM_001036495.1| Arabidopsis thaliana unknown protein AT4G018... 48 0.038
11gb|DQ108702.1| Arabidopsis thaliana clone 11468 mRNA sequence 48 0.038
12dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 46 0.15
13gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete se... 44 0.59
14gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, co... 44 0.59
15gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromo... 44 0.59
16gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15... 44 0.59
17emb|BX817365.1|CNS0ACR0 Arabidopsis thaliana Full-length cDNA Co... 44 0.59
18gb|AC146099.3| Pan troglodytes BAC clone RP43-5L2 from chromosom... 44 0.59
19gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, c... 44 0.59
20emb|CT009580.9| Mouse DNA sequence from clone RP23-133F14 on chr... 44 0.59
21gb|AC166114.5| Mus musculus BAC clone RP23-63J20 from chromosome... 42 2.3
22gb|AC124423.3| Mus musculus BAC clone RP24-328B20 from chromosom... 42 2.3
23gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete se... 42 2.3
24gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosom... 42 2.3
25gb|AC154529.2| Mus musculus BAC clone RP23-463N16 from 16, compl... 42 2.3
26gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete... 40 9.3
27gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, comp... 40 9.3
28gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, c... 40 9.3
29emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 40 9.3
30emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in... 40 9.3
31gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer... 40 9.3
32emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in ... 40 9.3
33emb|BX828192.1|CNS0A2YJ Arabidopsis thaliana Full-length cDNA Co... 40 9.3
34gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, r... 40 9.3
35gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, c... 40 9.3
36gb|AC013438.6| Homo sapiens BAC clone RP11-218M2 from 2, complet... 40 9.3
37gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome... 40 9.3
38gb|AF133052.1|AF133052 Walleye epidermal hyperplasia virus type ... 40 9.3
39emb|CR925743.18| Zebrafish DNA sequence from clone CH211-107N13 ... 40 9.3
40gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90... 40 9.3
41gb|AF014793.1| Walleye epidermal hyperplasia virus type 2 pol po... 40 9.3
42gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complet... 40 9.3 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 68       agcactgagattgaagttgatgttccatgttcagtggcctaccagtgttactccgaacgt 127
                ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 12634614 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 12634673

                                                            
Query: 128      gagactattcctcagtggatgccattcatatcaactgtcaaggt 171
                ||||| |||||||| ||||||||||| || ||| ||||||||||
Sbjct: 12634674 gagaccattcctcaatggatgccatttatctcatctgtcaaggt 12634717



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 171      tccttgaagataaaccagatctttcccgttggactttgaagtatgcgatacttggtcagg 230
                |||||||||||||||||||||  || ||||||||||||||||||| |||||||||||  |
Sbjct: 12635991 tccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtcgag 12636050

                                                  
Query: 231      atgtagaattttcttggcttgcccgaaacatgac 264
                ||||||||||||| ||||| || |||||||||||
Sbjct: 12636051 atgtagaattttcgtggctagctcgaaacatgac 12636084



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                            
Query: 419      ctgaaaccatttctggaaggtttgcttttcaatgggctagaacgttttgtgacgtttgcg 478
                ||||| ||||||||||||||  ||||| |  | ||  |||||||||| | ||||||||||
Sbjct: 12636822 ctgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgtttgcg 12636881

                                   
Query: 479      aaggagcgctatagcaaga 497
                ||||| || ||||||||||
Sbjct: 12636882 aaggaacgatatagcaaga 12636900



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 269      actaaaaatcagaagattcactggcgatctcttgaaggtcttc 311
                |||||||| || ||||| || ||||||||||||||||||||||
Sbjct: 12636166 actaaaaaccaaaagatccattggcgatctcttgaaggtcttc 12636208



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 35       ttctcccctcgggccatggagtggcaggagtgcag 69
                |||||||||  ||||||||||||||||||||||||
Sbjct: 12633717 ttctcccctgtggccatggagtggcaggagtgcag 12633751



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 317      aggggcgctgtccgattcttccctaagagttcatcctcttgtagagtaca 366
                ||||| ||||| || ||||| ||||| || ||||||||||| ||||||||
Sbjct: 12636524 aggggtgctgttcgtttctttcctaaaagctcatcctcttgcagagtaca 12636573



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 365      cagctaacagtggcctatgaagttcctgaaatt 397
                ||||| || ||||| ||||||||||||||||||
Sbjct: 12636667 cagctgacggtggcttatgaagttcctgaaatt 12636699
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0537A05
          Length = 152396

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                          
Query: 68     agcactgagattgaagttgatgttccatgttcagtggcctaccagtgttactccgaacgt 127
              ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 146224 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 146283

                                                          
Query: 128    gagactattcctcagtggatgccattcatatcaactgtcaaggt 171
              ||||| |||||||| ||||||||||| || ||| ||||||||||
Sbjct: 146284 gagaccattcctcaatggatgccatttatctcatctgtcaaggt 146327



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                          
Query: 171    tccttgaagataaaccagatctttcccgttggactttgaagtatgcgatacttggtcagg 230
              |||||||||||||||||||||  || ||||||||||||||||||| |||||||||||  |
Sbjct: 147601 tccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtcgag 147660

                                                
Query: 231    atgtagaattttcttggcttgcccgaaacatgac 264
              ||||||||||||| ||||| || |||||||||||
Sbjct: 147661 atgtagaattttcgtggctagctcgaaacatgac 147694



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                          
Query: 419    ctgaaaccatttctggaaggtttgcttttcaatgggctagaacgttttgtgacgtttgcg 478
              ||||| ||||||||||||||  ||||| |  | ||  |||||||||| | ||||||||||
Sbjct: 148432 ctgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgtttgcg 148491

                                 
Query: 479    aaggagcgctatagcaaga 497
              ||||| || ||||||||||
Sbjct: 148492 aaggaacgatatagcaaga 148510



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 269    actaaaaatcagaagattcactggcgatctcttgaaggtcttc 311
              |||||||| || ||||| || ||||||||||||||||||||||
Sbjct: 147776 actaaaaaccaaaagatccattggcgatctcttgaaggtcttc 147818



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 35     ttctcccctcgggccatggagtggcaggagtgcag 69
              |||||||||  ||||||||||||||||||||||||
Sbjct: 145327 ttctcccctgtggccatggagtggcaggagtgcag 145361



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 317    aggggcgctgtccgattcttccctaagagttcatcctcttgtagagtaca 366
              ||||| ||||| || ||||| ||||| || ||||||||||| ||||||||
Sbjct: 148134 aggggtgctgttcgtttctttcctaaaagctcatcctcttgcagagtaca 148183



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 365    cagctaacagtggcctatgaagttcctgaaatt 397
              ||||| || ||||| ||||||||||||||||||
Sbjct: 148277 cagctgacggtggcttatgaagttcctgaaatt 148309
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>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0554D10
          Length = 158723

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                        
Query: 68   agcactgagattgaagttgatgttccatgttcagtggcctaccagtgttactccgaacgt 127
            ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 1643 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 1702

                                                        
Query: 128  gagactattcctcagtggatgccattcatatcaactgtcaaggt 171
            ||||| |||||||| ||||||||||| || ||| ||||||||||
Sbjct: 1703 gagaccattcctcaatggatgccatttatctcatctgtcaaggt 1746



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                        
Query: 171  tccttgaagataaaccagatctttcccgttggactttgaagtatgcgatacttggtcagg 230
            |||||||||||||||||||||  || ||||||||||||||||||| |||||||||||  |
Sbjct: 3020 tccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtcgag 3079

                                              
Query: 231  atgtagaattttcttggcttgcccgaaacatgac 264
            ||||||||||||| ||||| || |||||||||||
Sbjct: 3080 atgtagaattttcgtggctagctcgaaacatgac 3113



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                        
Query: 419  ctgaaaccatttctggaaggtttgcttttcaatgggctagaacgttttgtgacgtttgcg 478
            ||||| ||||||||||||||  ||||| |  | ||  |||||||||| | ||||||||||
Sbjct: 3851 ctgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgtttgcg 3910

                               
Query: 479  aaggagcgctatagcaaga 497
            ||||| || ||||||||||
Sbjct: 3911 aaggaacgatatagcaaga 3929



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 269  actaaaaatcagaagattcactggcgatctcttgaaggtcttc 311
            |||||||| || ||||| || ||||||||||||||||||||||
Sbjct: 3195 actaaaaaccaaaagatccattggcgatctcttgaaggtcttc 3237



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 35  ttctcccctcgggccatggagtggcaggagtgcag 69
           |||||||||  ||||||||||||||||||||||||
Sbjct: 746 ttctcccctgtggccatggagtggcaggagtgcag 780



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 317  aggggcgctgtccgattcttccctaagagttcatcctcttgtagagtaca 366
            ||||| ||||| || ||||| ||||| || ||||||||||| ||||||||
Sbjct: 3553 aggggtgctgttcgtttctttcctaaaagctcatcctcttgcagagtaca 3602



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 365  cagctaacagtggcctatgaagttcctgaaatt 397
            ||||| || ||||| ||||||||||||||||||
Sbjct: 3696 cagctgacggtggcttatgaagttcctgaaatt 3728
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>ref|NM_183835.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 279

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                       
Query: 171 tccttgaagataaaccagatctttcccgttggactttgaagtatgcgatacttggtcagg 230
           |||||||||||||||||||||  || ||||||||||||||||||| |||||||||||  |
Sbjct: 41  tccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtcgag 100

                                             
Query: 231 atgtagaattttcttggcttgcccgaaacatgac 264
           ||||||||||||| ||||| || |||||||||||
Sbjct: 101 atgtagaattttcgtggctagctcgaaacatgac 134



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                       
Query: 374 gtggcctatgaagttcctgaaattctgaacccggttgcatcagccctgaaaccatttctg 433
           ||||| |||||||||||||||||| ||   || ||||| ||||| ||||| |||||||||
Sbjct: 142 gtggcttatgaagttcctgaaattttggcacctgttgcgtcagcactgaagccatttctg 201

                                                                       
Query: 434 gaaggtttgcttttcaatgggctagaacgttttgtgacgtttgcgaaggagcgctatagc 493
           |||||  ||||| |  | ||  |||||||||| | ||||||||||||||| || ||||||
Sbjct: 202 gaagggctgcttatgcaaggtttagaacgtttcgcgacgtttgcgaaggaacgatatagc 261

               
Query: 494 aaga 497
           ||||
Sbjct: 262 aaga 265
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>ref|NM_100129.2| Arabidopsis thaliana unknown protein AT1G02475 mRNA, complete cds
          Length = 795

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 275 aatcagaagattcactggcgatctcttgaaggtcttcctaa 315
           |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 457 aatcagaaaatccattggagatctcttgaaggtcttcctaa 497
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>gb|AY063040.1| Arabidopsis thaliana unknown protein (At1g02475) mRNA, complete cds
          Length = 690

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 275 aatcagaagattcactggcgatctcttgaaggtcttcctaa 315
           |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 445 aatcagaaaatccattggagatctcttgaaggtcttcctaa 485
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>gb|AF370292.1| Arabidopsis thaliana unknown protein (At1g02475) mRNA, complete cds
          Length = 812

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 275 aatcagaagattcactggcgatctcttgaaggtcttcctaa 315
           |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 457 aatcagaaaatccattggagatctcttgaaggtcttcctaa 497
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>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
              sequence
          Length = 121668

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 275    aatcagaagattcactggcgatctcttgaaggtcttcctaa 315
              |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 103242 aatcagaaaatccattggagatctcttgaaggtcttcctaa 103282
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>dbj|AK176092.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-86-K15
          Length = 896

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 275 aatcagaagattcactggcgatctcttgaaggtcttcctaa 315
           |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 486 aatcagaaaatccattggagatctcttgaaggtcttcctaa 526
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>ref|NM_001036495.1| Arabidopsis thaliana unknown protein AT4G01883 mRNA, complete cds
          Length = 675

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 296 tctcttgaaggtcttcctaacaggggcgctgtccgattcttccc 339
           ||||||||||| |||||||||| |||| ||||||| || |||||
Sbjct: 472 tctcttgaagggcttcctaacaagggcactgtccggtttttccc 515
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>gb|DQ108702.1| Arabidopsis thaliana clone 11468 mRNA sequence
          Length = 943

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 296 tctcttgaaggtcttcctaacaggggcgctgtccgattcttccc 339
           ||||||||||| |||||||||| |||| ||||||| || |||||
Sbjct: 539 tctcttgaagggcttcctaacaagggcactgtccggtttttccc 582
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 1       gagcagcagcacggcaagggcga 23
               |||||||||||||||||||||||
Sbjct: 2151461 gagcagcagcacggcaagggcga 2151439
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>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
          Length = 106528

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 274   aaatcagaagattcactggcgatctcttgaaggtcttcctaacagg 319
             ||||||||| || || ||||||||||| || |||||||| ||||||
Sbjct: 25379 aaatcagaaaatccattggcgatctctggatggtcttcccaacagg 25334
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>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence
          Length = 233775

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 380    tatgaagttcctgaaattctga 401
              ||||||||||||||||||||||
Sbjct: 165115 tatgaagttcctgaaattctga 165094
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>gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromosome 15, complete
             sequence
          Length = 150565

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 380   tatgaagttcctgaaattctga 401
             ||||||||||||||||||||||
Sbjct: 47563 tatgaagttcctgaaattctga 47542
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>gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15, complete sequence
          Length = 170520

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 380    tatgaagttcctgaaattctga 401
              ||||||||||||||||||||||
Sbjct: 108759 tatgaagttcctgaaattctga 108780
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>emb|BX817365.1|CNS0ACR0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL18ZF02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 367

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 294 gatctcttgaaggtcttcctaa 315
           ||||||||||||||||||||||
Sbjct: 7   gatctcttgaaggtcttcctaa 28
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>gb|AC146099.3| Pan troglodytes BAC clone RP43-5L2 from chromosome 7, complete sequence
          Length = 196770

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 380    tatgaagttcctgaaattctga 401
              ||||||||||||||||||||||
Sbjct: 119002 tatgaagttcctgaaattctga 119023
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>gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, complete sequence
          Length = 174192

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 380    tatgaagttcctgaaattctga 401
              ||||||||||||||||||||||
Sbjct: 128955 tatgaagttcctgaaattctga 128934
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>emb|CT009580.9| Mouse DNA sequence from clone RP23-133F14 on chromosome 17, complete
              sequence
          Length = 191260

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 331    attcttccctaagagttcatcc 352
              ||||||||||||||||||||||
Sbjct: 141659 attcttccctaagagttcatcc 141638
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>gb|AC166114.5| Mus musculus BAC clone RP23-63J20 from chromosome 16, complete sequence
          Length = 207146

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    gattcttccctaagagttcat 350
              |||||||||||||||||||||
Sbjct: 177868 gattcttccctaagagttcat 177888
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>gb|AC124423.3| Mus musculus BAC clone RP24-328B20 from chromosome 8, complete sequence
          Length = 171403

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ggcaggagtgcagcactgaga 77
             |||||||||||||||||||||
Sbjct: 60953 ggcaggagtgcagcactgaga 60973
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>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence
          Length = 113622

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 528   caacaccaagaatttcaatttcatt 552
             |||||||||||||||||| ||||||
Sbjct: 68097 caacaccaagaatttcaacttcatt 68121
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>gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosome 9, complete sequence
          Length = 161507

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   ctatgaagttcctgaaattct 399
             |||||||||||||||||||||
Sbjct: 90714 ctatgaagttcctgaaattct 90694
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>gb|AC154529.2| Mus musculus BAC clone RP23-463N16 from 16, complete sequence
          Length = 177958

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    gattcttccctaagagttcat 350
              |||||||||||||||||||||
Sbjct: 142693 gattcttccctaagagttcat 142673
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>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 533  ccaagaatttcaatttcatt 552
            ||||||||||||||||||||
Sbjct: 6642 ccaagaatttcaatttcatt 6661
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>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence
          Length = 149157

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     gggcgaggcctgccttgttctccc 41
              |||| |||||||||||||||||||
Sbjct: 103347 gggccaggcctgccttgttctccc 103370
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>gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, complete sequence
          Length = 63480

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gcctgccttgttctcccctc 44
             ||||||||||||||||||||
Sbjct: 39157 gcctgccttgttctcccctc 39138
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>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 624   ttattctagcaaataaatat 643
             ||||||||||||||||||||
Sbjct: 15804 ttattctagcaaataaatat 15785
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>emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in linkage group 13,
             complete sequence
          Length = 140709

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 468   tgacgtttgcgaaggagcgctata 491
             ||||||||| ||||||||||||||
Sbjct: 93476 tgacgtttgagaaggagcgctata 93453
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>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 118301

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    aaaatcagaagattcactgg 292
              ||||||||||||||||||||
Sbjct: 107797 aaaatcagaagattcactgg 107816
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>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3,
             complete sequence
          Length = 237569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 628   tctagcaaataaatattgactgtt 651
             |||| |||||||||||||||||||
Sbjct: 52566 tctaccaaataaatattgactgtt 52543
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>emb|BX828192.1|CNS0A2YJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZH09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1094

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 296 tctcttgaaggtcttcctaacaggggcgctgtccgattcttccc 339
           ||||||||||| |||||||||| |||  ||||||| || |||||
Sbjct: 707 tctcttgaagggcttcctaacaaggggactgtccggtttttccc 750
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>gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, region 96E-96F, BAC clone
             BACR03O03, complete sequence
          Length = 132168

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   ccaagaatttcaatttcatt 552
             ||||||||||||||||||||
Sbjct: 38106 ccaagaatttcaatttcatt 38087
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>gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, complete sequence
          Length = 41330

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   gttccatgttcagtggccta 108
            ||||||||||||||||||||
Sbjct: 2491 gttccatgttcagtggccta 2510
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>gb|AC013438.6| Homo sapiens BAC clone RP11-218M2 from 2, complete sequence
          Length = 65971

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 627   ttctagcaaataaatattga 646
             ||||||||||||||||||||
Sbjct: 47099 ttctagcaaataaatattga 47080
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>gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome 14, complete sequence
          Length = 236748

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     tgttcagtggcctaccagtgttac 118
              ||||||||||||||||||| ||||
Sbjct: 110356 tgttcagtggcctaccagtcttac 110333
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>gb|AF133052.1|AF133052 Walleye epidermal hyperplasia virus type 2 long terminal repeat,
            complete sequence; gag polyprotein (gag-pol) gene,
            complete cds; pol polyprotein (gag-pol) gene, partial
            cds; envelope polyprotein (env) and cyclin D homolog
            genes, complete cds; and unknown genes
          Length = 13125

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 631  agcaaataaatattgactgt 650
            ||||||||||||||||||||
Sbjct: 3691 agcaaataaatattgactgt 3672
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>emb|CR925743.18| Zebrafish DNA sequence from clone CH211-107N13 in linkage group 20,
              complete sequence
          Length = 161957

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    taaaaatcagaagattcact 290
              ||||||||||||||||||||
Sbjct: 143297 taaaaatcagaagattcact 143278
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>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the
             complete sequence
          Length = 188285

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   ccaagaatttcaatttcatt 552
             ||||||||||||||||||||
Sbjct: 48620 ccaagaatttcaatttcatt 48601
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>gb|AF014793.1| Walleye epidermal hyperplasia virus type 2 pol polyprotein (pol)
           gene, partial cds
          Length = 3741

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 631 agcaaataaatattgactgt 650
           ||||||||||||||||||||
Sbjct: 852 agcaaataaatattgactgt 833
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>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence
          Length = 217530

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ggcctgccttgttctcccct 43
             ||||||||||||||||||||
Sbjct: 91069 ggcctgccttgttctcccct 91050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,075,539
Number of Sequences: 3902068
Number of extensions: 6075539
Number of successful extensions: 166679
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 166558
Number of HSP's gapped (non-prelim): 117
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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