ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13l03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191794.1| Oryza sativa (japonica cultivar-group), predic... 622 e-175
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
3dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
4ref|NM_113350.2| Arabidopsis thaliana HCF101 (HIGH-CHLOROPHYLL-F... 125 2e-25
5gb|AY450358.1| Arabidopsis thaliana [4Fe-4S] cluster assembly fa... 125 2e-25
6emb|AJ540304.1|ATH540304 Arabidopsis thaliana partial mRNA for p... 125 2e-25
7gb|AY086264.1| Arabidopsis thaliana clone 231598 mRNA, complete ... 125 2e-25
8dbj|AK107082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
9emb|BX823690.1|CNS0A7UW Arabidopsis thaliana Full-length cDNA Co... 103 6e-19
10emb|BX823365.1|CNS0A6NM Arabidopsis thaliana Full-length cDNA Co... 103 6e-19
11dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 94 6e-16
12emb|AL596173.1| Listeria innocua Clip11262 complete genome, segm... 46 0.12
13emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 44 0.49
14gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 1.9
15gb|AC172115.2| Rhesus Macaque CHR16 BAC CH250-479K3 (Children's ... 42 1.9
16gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 7.6
17gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, com... 40 7.6
18gb|AE009952.1| Yersinia pestis KIM, complete genome 40 7.6
19gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosom... 40 7.6
20gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, com... 40 7.6
21emb|Z97989.1|HS66H14 Human DNA sequence from clone RP1-66H14 on ... 40 7.6
22emb|AL591896.6| Human DNA sequence from clone RP11-422P22 on chr... 40 7.6
23emb|AL355152.8| Human DNA sequence from clone RP11-725M24 on chr... 40 7.6
24gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map... 40 7.6
25emb|Z48931.1|GGB2MGB6 G.gallus gene for beta-2 microglobulin (cl... 40 7.6
26emb|Z48922.1|GGB2MGB5 G.gallus gene for beta-2 microglobulin (cl... 40 7.6
27emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC... 40 7.6
28emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; seg... 40 7.6
29gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 40 7.6
30gb|AC159326.9| Mus musculus 10 BAC RP23-451H6 (Roswell Park Canc... 40 7.6
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
33gb|AY193548.1|AY193549S2 Lactuca sativa clone TDQ resistance pro... 40 7.6
34gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
35gb|CP000215.1| Drosophila melanogaster genomic scaffold 21100002... 40 7.6
36gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 7.6 
>ref|NM_191794.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score =  622 bits (314), Expect = e-175
 Identities = 500/562 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    agcagtctcaagttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgctta 61
            |||||| ||||| |||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct: 528  agcagtttcaagctgcaagggaggagttggaaagtctacagttgctgtaaatcttgcata 587

                                                                        
Query: 62   taccttagctggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
            ||| |||||||||||||||||||||||||| || || ||||| |||||||| ||||| ||
Sbjct: 588  tacattagctggtatgggggccagggttggaatatttgatgctgatgtcttcggtccgag 647

                                                                        
Query: 122  cttaccaaatatggtttctccagagaaccgactgctagtggtgaacccagaaagcaaaag 181
            |||||||| |||||||||||| || ||||| ||||||||| ||||||||||||||| |||
Sbjct: 648  cttaccaactatggtttctcctgaaaaccggctgctagtgatgaacccagaaagcagaag 707

                                                                        
Query: 182  tattcttccgactgagtatttgggagtcaaattggtgtctttcggctttgctggacaagg 241
            ||||||||| || ||||||||||| |||||  |||||||||| |||||||||||||||||
Sbjct: 708  tattcttccaaccgagtatttgggcgtcaagatggtgtcttttggctttgctggacaagg 767

                                                                        
Query: 242  aagagcaatcatgcgaggtccaatggtttcaggagtcattaatcagttgctgaccacgac 301
            |||||| || ||||| |||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 768  aagagctataatgcgtggtccaatggtttcgggagtgattaatcagttgctgaccactac 827

                                                                        
Query: 302  tgactggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatataca 361
            ||| ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 828  tgattggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatataca 887

                                                                        
Query: 362  cttaacactctgtcaggtagctccattgactgcagctgtgattgttactacccctcagaa 421
            ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 888  cttaacactctgtcaggtagccccattgactgcagctgtcattgttaccacccctcagaa 947

                                                                        
Query: 422  gttggcttttattgatgttgcaaagggtgttaggatgttctctaagctgaaggttccatg 481
            | | ||||| || |||||||||||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 948  gcttgctttcatcgatgttgcaaagggagttagaatgttttccaagctgaaggttccgtg 1007

                                                                        
Query: 482  tgttgcagttgttgagaacatgtgctactttgatgccgacgaaaagcgctattacccatt 541
             ||||||||||||||||||||||||||||| ||||| || | ||| || | |||||||||
Sbjct: 1008 cgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaacgattttacccatt 1067

                                  
Query: 542  tggaaaagggtctggagctcag 563
            |||  |||| ||||||||||||
Sbjct: 1068 tgggcaaggttctggagctcag 1089
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  176 bits (89), Expect = 5e-41
 Identities = 128/141 (90%)
 Strand = Plus / Plus

                                                                            
Query: 164      gaacccagaaagcaaaagtattcttccgactgagtatttgggagtcaaattggtgtcttt 223
                |||||||||||||| |||||||||||| || ||||||||||| |||||  ||||||||||
Sbjct: 30003081 gaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttt 30003140

                                                                            
Query: 224      cggctttgctggacaaggaagagcaatcatgcgaggtccaatggtttcaggagtcattaa 283
                 ||||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 30003141 tggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaa 30003200

                                     
Query: 284      tcagttgctgaccacgactga 304
                ||||||||||||||| |||||
Sbjct: 30003201 tcagttgctgaccactactga 30003221



 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                            
Query: 19       agggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagctggtatgg 78
                |||||||||||||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 30002862 agggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgg 30002921

                                                                            
Query: 79       gggccagggttgggattttcgatgccgatgtctttggtccaagcttaccaaatatggttt 138
                ||||||||||||| || || ||||| |||||||| ||||| |||||||||| ||||||||
Sbjct: 30002922 gggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggttt 30002981

                                       
Query: 139      ctccagagaaccgactgctagtg 161
                |||| || ||||| |||||||||
Sbjct: 30002982 ctcctgaaaaccggctgctagtg 30003004



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                            
Query: 374      tcaggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttat 433
                ||||||||| ||||||||||||||||| |||||||| |||||||||||| | ||||| ||
Sbjct: 30003536 tcaggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcat 30003595

                                                          
Query: 434      tgatgttgcaaagggtgttaggatgttctctaagctgaaggt 475
                 |||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 30003596 cgatgttgcaaagggagttagaatgttttccaagctgaaggt 30003637



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                            
Query: 307      ggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatatacacttaa 366
                |||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 30003375 ggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaa 30003434

                             
Query: 367      cactctgtcaggt 379
                |||||||||||||
Sbjct: 30003435 cactctgtcaggt 30003447



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 469      tgaaggttccatgtgttgcagttgttgagaacatgtgctactttgatgccgacgaaaagc 528
                |||||||||| || ||||||||||||||||||||||||||||| ||||| || | ||| |
Sbjct: 30003732 tgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaac 30003791

                                                   
Query: 529      gctattacccatttggaaaagggtctggagctcag 563
                | | ||||||||||||  |||| ||||||||||||
Sbjct: 30003792 gattttacccatttgggcaaggttctggagctcag 30003826
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480C01
          Length = 151100

 Score =  176 bits (89), Expect = 5e-41
 Identities = 128/141 (90%)
 Strand = Plus / Plus

                                                                          
Query: 164    gaacccagaaagcaaaagtattcttccgactgagtatttgggagtcaaattggtgtcttt 223
              |||||||||||||| |||||||||||| || ||||||||||| |||||  ||||||||||
Sbjct: 147639 gaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttt 147698

                                                                          
Query: 224    cggctttgctggacaaggaagagcaatcatgcgaggtccaatggtttcaggagtcattaa 283
               ||||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 147699 tggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaa 147758

                                   
Query: 284    tcagttgctgaccacgactga 304
              ||||||||||||||| |||||
Sbjct: 147759 tcagttgctgaccactactga 147779



 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                          
Query: 19     agggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagctggtatgg 78
              |||||||||||||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 147420 agggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgg 147479

                                                                          
Query: 79     gggccagggttgggattttcgatgccgatgtctttggtccaagcttaccaaatatggttt 138
              ||||||||||||| || || ||||| |||||||| ||||| |||||||||| ||||||||
Sbjct: 147480 gggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggttt 147539

                                     
Query: 139    ctccagagaaccgactgctagtg 161
              |||| || ||||| |||||||||
Sbjct: 147540 ctcctgaaaaccggctgctagtg 147562



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 374    tcaggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttat 433
              ||||||||| ||||||||||||||||| |||||||| |||||||||||| | ||||| ||
Sbjct: 148094 tcaggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcat 148153

                                                        
Query: 434    tgatgttgcaaagggtgttaggatgttctctaagctgaaggt 475
               |||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 148154 cgatgttgcaaagggagttagaatgttttccaagctgaaggt 148195



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                          
Query: 307    ggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatatacacttaa 366
              |||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 147933 ggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaa 147992

                           
Query: 367    cactctgtcaggt 379
              |||||||||||||
Sbjct: 147993 cactctgtcaggt 148005



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                          
Query: 469    tgaaggttccatgtgttgcagttgttgagaacatgtgctactttgatgccgacgaaaagc 528
              |||||||||| || ||||||||||||||||||||||||||||| ||||| || | ||| |
Sbjct: 148290 tgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaac 148349

                                                 
Query: 529    gctattacccatttggaaaagggtctggagctcag 563
              | | ||||||||||||  |||| ||||||||||||
Sbjct: 148350 gattttacccatttgggcaaggttctggagctcag 148384
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>ref|NM_113350.2| Arabidopsis thaliana HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP
            binding AT3G24430 (HCF101) mRNA, complete cds
          Length = 1794

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                        
Query: 300  actgactggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatata 359
            ||||| ||||| || || ||||||||||| || || |||||||| ||||| || ||||||
Sbjct: 882  actgaatggggagagctggactatcttgttatcgacatgcctcctggaactggtgatata 941

                                                                        
Query: 360  cacttaacactctgtcaggtagctccattgactgcagctgtgattgttactacccctcag 419
            ||  | ||  | || ||||| || |||||||| ||||| || ||||| || |||||||| 
Sbjct: 942  caactgaccttatgccaggttgcgccattgacagcagcggtaattgtcaccacccctcaa 1001

                                                                        
Query: 420  aagttggcttttattgatgttgcaaagggtgttaggatgttctctaagctgaaggttcca 479
            |||||||| ||||||||||||||||| ||||| ||||||||||| || || ||||| || 
Sbjct: 1002 aagttggcgtttattgatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtgcct 1061

                                               
Query: 480  tgtgttgcagttgttgagaacatgtgctactttga 514
            || ||||| ||||| ||||| |||||| |||||||
Sbjct: 1062 tgcgttgctgttgtggagaatatgtgccactttga 1096



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagct 71
           ||||||||||| || ||||| ||||| || || || |||||||| |||||||| ||||||
Sbjct: 594 agttgcaagggtggtgttgggaaatcaacagtagctgtaaatcttgcttatacattagct 653

                                                             
Query: 72  ggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           |||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 654 ggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 703
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>gb|AY450358.1| Arabidopsis thaliana [4Fe-4S] cluster assembly factor mRNA, complete
            cds; nuclear gene for chloroplast product
          Length = 1606

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                        
Query: 300  actgactggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatata 359
            ||||| ||||| || || ||||||||||| || || |||||||| ||||| || ||||||
Sbjct: 841  actgaatggggagagctggactatcttgttatcgacatgcctcctggaactggtgatata 900

                                                                        
Query: 360  cacttaacactctgtcaggtagctccattgactgcagctgtgattgttactacccctcag 419
            ||  | ||  | || ||||| || |||||||| ||||| || ||||| || |||||||| 
Sbjct: 901  caactgaccttatgccaggttgcgccattgacagcagcggtaattgtcaccacccctcaa 960

                                                                        
Query: 420  aagttggcttttattgatgttgcaaagggtgttaggatgttctctaagctgaaggttcca 479
            |||||||| ||||||||||||||||| ||||| ||||||||||| || || ||||| || 
Sbjct: 961  aagttggcgtttattgatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtgcct 1020

                                               
Query: 480  tgtgttgcagttgttgagaacatgtgctactttga 514
            || ||||| ||||| ||||| |||||| |||||||
Sbjct: 1021 tgcgttgctgttgtggagaatatgtgccactttga 1055



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagct 71
           ||||||||||| || ||||| ||||| || || || |||||||| |||||||| ||||||
Sbjct: 553 agttgcaagggtggtgttgggaaatcaacagtagctgtaaatcttgcttatacattagct 612

                                                             
Query: 72  ggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           |||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 613 ggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 662
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>emb|AJ540304.1|ATH540304 Arabidopsis thaliana partial mRNA for putative PSI stabilising
            protein precursor (hcf101 gene)
          Length = 1631

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                        
Query: 300  actgactggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatata 359
            ||||| ||||| || || ||||||||||| || || |||||||| ||||| || ||||||
Sbjct: 867  actgaatggggagagctggactatcttgttatcgacatgcctcctggaactggtgatata 926

                                                                        
Query: 360  cacttaacactctgtcaggtagctccattgactgcagctgtgattgttactacccctcag 419
            ||  | ||  | || ||||| || |||||||| ||||| || ||||| || |||||||| 
Sbjct: 927  caactgaccttatgccaggttgcgccattgacagcagcggtaattgtcaccacccctcaa 986

                                                                        
Query: 420  aagttggcttttattgatgttgcaaagggtgttaggatgttctctaagctgaaggttcca 479
            |||||||| ||||||||||||||||| ||||| ||||||||||| || || ||||| || 
Sbjct: 987  aagttggcgtttattgatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtgcct 1046

                                               
Query: 480  tgtgttgcagttgttgagaacatgtgctactttga 514
            || ||||| ||||| ||||| |||||| |||||||
Sbjct: 1047 tgcgttgctgttgtggagaatatgtgccactttga 1081



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagct 71
           ||||||||||| || ||||| ||||| || || || |||||||| |||||||| ||||||
Sbjct: 579 agttgcaagggtggtgttgggaaatcaacagtagctgtaaatcttgcttatacattagct 638

                                                             
Query: 72  ggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           |||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 639 ggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 688
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>gb|AY086264.1| Arabidopsis thaliana clone 231598 mRNA, complete sequence
          Length = 1762

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                        
Query: 300  actgactggggcgaacttgactatcttgtcattgatatgcctcccggaacaggcgatata 359
            ||||| ||||| || || ||||||||||| || || |||||||| ||||| || ||||||
Sbjct: 883  actgaatggggagagctggactatcttgttatcgacatgcctcctggaactggtgatata 942

                                                                        
Query: 360  cacttaacactctgtcaggtagctccattgactgcagctgtgattgttactacccctcag 419
            ||  | ||  | || ||||| || |||||||| ||||| || ||||| || |||||||| 
Sbjct: 943  caactgaccttatgccaggttgcgccattgacagcagcggtaattgtcaccacccctcaa 1002

                                                                        
Query: 420  aagttggcttttattgatgttgcaaagggtgttaggatgttctctaagctgaaggttcca 479
            |||||||| ||||||||||||||||| ||||| ||||||||||| || || ||||| || 
Sbjct: 1003 aagttggcgtttattgatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtgcct 1062

                                               
Query: 480  tgtgttgcagttgttgagaacatgtgctactttga 514
            || ||||| ||||| ||||| |||||| |||||||
Sbjct: 1063 tgcgttgctgttgtggagaatatgtgccactttga 1097



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagct 71
           ||||||||||| || ||||| ||||| || || || |||||||| |||||||| ||||||
Sbjct: 595 agttgcaagggtggtgttgggaaatcaacagtagctgtaaatcttgcttatacattagct 654

                                                             
Query: 72  ggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           |||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 655 ggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 704
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>dbj|AK107082.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F12, full
            insert sequence
          Length = 1984

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                        
Query: 374  tcaggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttat 433
            ||||||||| ||||||||||||||||| |||||||| |||||||||||| | ||||| ||
Sbjct: 1849 tcaggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcat 1790

                                                      
Query: 434  tgatgttgcaaagggtgttaggatgttctctaagctgaaggt 475
             |||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 1789 cgatgttgcaaagggagttagaatgttttccaagctgaaggt 1748



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 469  tgaaggttccatgtgttgcagttgttgagaacatgtgctactttgatgccgacgaaaagc 528
            |||||||||| || ||||||||||||||||||||||||||||| ||||| || | ||| |
Sbjct: 1653 tgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaac 1594

                                               
Query: 529  gctattacccatttggaaaagggtctggagctcag 563
            | | ||||||||||||  |||| ||||||||||||
Sbjct: 1593 gattttacccatttgggcaaggttctggagctcag 1559



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 336  atgcctcccggaacaggcgatatacacttaacactctgtcaggt 379
            |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1981 atgcctccaggaacaggagatatacacttaacactctgtcaggt 1938
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>emb|BX823690.1|CNS0A7UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZE08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1678

 Score =  103 bits (52), Expect = 6e-19
 Identities = 118/140 (84%)
 Strand = Plus / Plus

                                                                        
Query: 375  caggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttatt 434
            ||||| || |||||||| ||||| || ||||| || |||| ||| |||||||| ||||||
Sbjct: 929  caggttgcgccattgacagcagcggtaattgtcaccacccatcaaaagttggcgtttatt 988

                                                                        
Query: 435  gatgttgcaaagggtgttaggatgttctctaagctgaaggttccatgtgttgcagttgtt 494
            ||||||||||| ||||| ||||||||||| || || ||||| || || ||||| ||||| 
Sbjct: 989  gatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtgccttgcgttgctgttgtg 1048

                                
Query: 495  gagaacatgtgctactttga 514
            ||||| |||||| |||||||
Sbjct: 1049 gagaatatgtgccactttga 1068



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttataccttagct 71
           |||||| |||| || ||||| ||||| || || || |||||||| |||||||| ||||||
Sbjct: 573 agttgcgagggtggtgttgggaaatcaacagtagctgtaaatcttgcttatacattagct 632

                                                             
Query: 72  ggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           |||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 633 ggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 682
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>emb|BX823365.1|CNS0A6NM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZE11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1700

 Score =  103 bits (52), Expect = 6e-19
 Identities = 118/140 (84%)
 Strand = Plus / Plus

                                                                        
Query: 375  caggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttatt 434
            ||||| || |||||||| ||||| || ||||| || |||||||| |||||||| ||||||
Sbjct: 927  caggttgcgccattgacagcagcggtaattgtcaccacccctcaaaagttggcgtttatt 986

                                                                        
Query: 435  gatgttgcaaagggtgttaggatgttctctaagctgaaggttccatgtgttgcagttgtt 494
            ||||| ||||| ||||| ||||||||||| || || ||||| || || ||||| ||||| 
Sbjct: 987  gatgtcgcaaaaggtgtaaggatgttctcaaaacttaaggtgccttgcgttgctgttgtg 1046

                                
Query: 495  gagaacatgtgctactttga 514
            ||||| |||||| |||||||
Sbjct: 1047 gagaatatgtgccactttga 1066



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 91/111 (81%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  agttgcaagggaggagttggaaaatctacggtcgcagtaaatctcgcttatacctt-agc 70
           |||||| |||| || ||||| ||||| || || || || ||||| |||||||| || |||
Sbjct: 563 agttgcgagggtggtgttgggaaatcaacagtagctgtgaatcttgcttatacattcagc 622

                                                              
Query: 71  tggtatgggggccagggttgggattttcgatgccgatgtctttggtccaag 121
           ||||||||| || || ||||| || || ||||| ||||||| |||||||||
Sbjct: 623 tggtatgggtgctagagttggtatctttgatgctgatgtctatggtccaag 673
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>dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7M2
          Length = 80393

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                         
Query: 374   tcaggtagctccattgactgcagctgtgattgttactacccctcagaagttggcttttat 433
             |||||| || |||||||| ||||| || ||||| || |||||||| |||||||| |||||
Sbjct: 77433 tcaggttgcgccattgacagcagcggtaattgtcaccacccctcaaaagttggcgtttat 77374

                                                        
Query: 434   tgatgttgcaaagggtgttaggatgttctctaagctgaaggtt 476
             |||||||||||| ||||| ||||||||||| || || ||||||
Sbjct: 77373 tgatgttgcaaaaggtgtaaggatgttctcaaaacttaaggtt 77331



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                         
Query: 27    gttggaaaatctacggtcgcagtaaatctcgcttataccttagctggtatgggggccagg 86
             ||||| ||||| || || || |||||||| |||||||| |||||||||||||| || || 
Sbjct: 78145 gttgggaaatcaacagtagctgtaaatcttgcttatacattagctggtatgggtgctaga 78086

                                                
Query: 87    gttgggattttcgatgccgatgtctttggtccaag 121
             ||||| || || ||||| ||||||| |||||||||
Sbjct: 78085 gttggtatctttgatgctgatgtctatggtccaag 78051



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 318   gactatcttgtcattgatatgcctcccggaacaggcgatataca 361
             ||||||||||| || || |||||||| ||||| || ||||||||
Sbjct: 77694 gactatcttgttatcgacatgcctcctggaactggtgatataca 77651
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>emb|AL596173.1| Listeria innocua Clip11262 complete genome, segment 11/12
          Length = 305050

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 10     caagttgcaagggaggagttggaaaatctacggtcgcag 48
              ||||| |||||||||| ||||||||||| || |||||||
Sbjct: 154521 caagtggcaagggaggcgttggaaaatcgactgtcgcag 154483
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 306     tggggcgaacttgactatcttgtcattgat 335
               |||||||||||||| |||||| ||||||||
Sbjct: 3321428 tggggcgaacttgattatcttatcattgat 3321399
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     tgggattttcgatgccgatgt 109
              |||||||||||||||||||||
Sbjct: 577028 tgggattttcgatgccgatgt 577008
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>gb|AC172115.2| Rhesus Macaque CHR16 BAC CH250-479K3 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 138615

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   tgtctttggtccaagcttacc 127
             |||||||||||||||||||||
Sbjct: 26951 tgtctttggtccaagcttacc 26971
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 333     gatatgcctcccggaacaggcgat 356
               ||||||||||| ||||||||||||
Sbjct: 1675169 gatatgcctccaggaacaggcgat 1675146
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>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence
          Length = 161846

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   cagaaagcaaaagtattctt 188
             ||||||||||||||||||||
Sbjct: 42020 cagaaagcaaaagtattctt 42001
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     tcattaatcagttgctgacc 296
               ||||||||||||||||||||
Sbjct: 2420182 tcattaatcagttgctgacc 2420201
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>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence
          Length = 175150

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    caagggaggagttggaaaat 36
             ||||||||||||||||||||
Sbjct: 43063 caagggaggagttggaaaat 43044
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>gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, complete sequence
          Length = 211821

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cagaaagcaaaagtattctt 188
             ||||||||||||||||||||
Sbjct: 19555 cagaaagcaaaagtattctt 19574
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>emb|Z97989.1|HS66H14 Human DNA sequence from clone RP1-66H14 on chromosome 6q21-22 Contains
             the 3' end of the FYN gene for the FYN oncogene related to
             SRC, FGR, YES and the 5' end of the C6orf5 gene for
             chromosome 6 open reading frame 5 (NFkB-activating protein
             ACT1, connection to IKK and SAPK/JNK, chromosome 6 open
             reading frame 6) (C6orf5)(ACT1, CIKS, C6ORF6,
             DKFZP586G0522)(contains FLJ22949), complete sequence
          Length = 155937

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   cactctgtcaggtagctcca 386
             ||||||||||||||||||||
Sbjct: 47856 cactctgtcaggtagctcca 47875
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>emb|AL591896.6| Human DNA sequence from clone RP11-422P22 on chromosome 1 Contains a
            gene for a novel protein containing Kelch motif and a
            putative novel gene, complete sequence
          Length = 117320

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   gtatgggggccagggttggg 92
            ||||||||||||||||||||
Sbjct: 4086 gtatgggggccagggttggg 4067
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>emb|AL355152.8| Human DNA sequence from clone RP11-725M24 on chromosome 9, complete
             sequence
          Length = 118151

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   cctcagaagttggcttttat 433
             ||||||||||||||||||||
Sbjct: 43970 cctcagaagttggcttttat 43989
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>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence
          Length = 228883

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    caggagtcattaatcagttg 290
              ||||||||||||||||||||
Sbjct: 159013 caggagtcattaatcagttg 158994
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>emb|Z48931.1|GGB2MGB6 G.gallus gene for beta-2 microglobulin (clone RG6)
          Length = 3609

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  tgtctttcggctttgctgga 236
            ||||||||||||||||||||
Sbjct: 3223 tgtctttcggctttgctgga 3242
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>emb|Z48922.1|GGB2MGB5 G.gallus gene for beta-2 microglobulin (clone RG5)
          Length = 3586

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  tgtctttcggctttgctgga 236
            ||||||||||||||||||||
Sbjct: 3200 tgtctttcggctttgctgga 3219
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>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             6/6
          Length = 155932

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   gatatgcctcccggaacaggcgat 356
             ||||||||||| ||||||||||||
Sbjct: 48472 gatatgcctccaggaacaggcgat 48449
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>emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; segment 11/20
          Length = 334050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    tcattaatcagttgctgacc 296
              ||||||||||||||||||||
Sbjct: 134011 tcattaatcagttgctgacc 133992
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>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
             sequence, complete sequence
          Length = 138826

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   accaaatatggtttctccag 144
             ||||||||||||||||||||
Sbjct: 45533 accaaatatggtttctccag 45514
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>gb|AC159326.9| Mus musculus 10 BAC RP23-451H6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230689

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   caggagtcattaatcagttg 290
             ||||||||||||||||||||
Sbjct: 63534 caggagtcattaatcagttg 63515
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     accaaatatggtttctccag 144
               ||||||||||||||||||||
Sbjct: 5282319 accaaatatggtttctccag 5282338
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     accaaatatggtttctccag 144
               ||||||||||||||||||||
Sbjct: 6586323 accaaatatggtttctccag 6586304
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>gb|AY193548.1|AY193549S2 Lactuca sativa clone TDQ resistance protein RGC2 (RGC2) pseudogene,
           partial sequence
          Length = 3704

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 475 ttccatgtgttgcagttgtt 494
           ||||||||||||||||||||
Sbjct: 591 ttccatgtgttgcagttgtt 610
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     accaaatatggtttctccag 144
               ||||||||||||||||||||
Sbjct: 6652790 accaaatatggtttctccag 6652771
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>gb|CP000215.1| Drosophila melanogaster genomic scaffold 211000022280786
          Length = 161503

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   tgtctttggtccaagcttac 126
             ||||||||||||||||||||
Sbjct: 19191 tgtctttggtccaagcttac 19210



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   tgtctttggtccaagcttac 126
             ||||||||||||||||||||
Sbjct: 12492 tgtctttggtccaagcttac 12511
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 333     gatatgcctcccggaacaggcgat 356
               ||||||||||||||||| ||||||
Sbjct: 2544342 gatatgcctcccggaaccggcgat 2544319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,408,667
Number of Sequences: 3902068
Number of extensions: 4408667
Number of successful extensions: 76444
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76218
Number of HSP's gapped (non-prelim): 222
length of query: 563
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 540
effective length of database: 17,143,297,704
effective search space: 9257380760160
effective search space used: 9257380760160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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