ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13j21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY120886.1| Hordeum vulgare RNase S-like protein mRNA, comple... 502 e-139
2gb|BT009061.1| Triticum aestivum clone wds1c.pk001.m19.f:fis, fu... 270 3e-69
3gb|AF495872.1| Triticum aestivum S-like RNase mRNA, complete cds 256 4e-65
4gb|AY056038.1| Oryza sativa RNase S-like protein mRNA, complete cds 139 7e-30
5gb|AF439449.1|AF439449 Oryza sativa RNase S-like protein gene, c... 139 7e-30
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
7dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
8dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
9dbj|AK119186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
10dbj|AK104888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
11dbj|AK104599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
12dbj|AK104553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
13dbj|AK104509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
14dbj|AK104656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
15dbj|AK104454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
16dbj|AK104221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
17dbj|AK098949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
18dbj|AK061438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
19gb|AY061961.1| Oryza sativa drought-induced S-like ribonuclease ... 131 2e-27
20gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, compl... 44 0.31
21gb|AC026827.6| Homo sapiens chromosome 8, clone RP11-678C14, com... 44 0.31
22gb|AY107950.1| Zea mays PCO076023 mRNA sequence 44 0.31
23gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, comple... 44 0.31
24dbj|AP004286.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.31
25gb|AC164589.6| Mus musculus chromosome 8, clone RP24-363C11, com... 42 1.2
26ref|XM_535606.2| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
27ref|XM_843397.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
28ref|XM_851100.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
29ref|XM_851054.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
30ref|XM_851019.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
31ref|XM_850977.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
32ref|XM_850902.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
33ref|XM_850861.1| PREDICTED: Canis familiaris similar to Ras-GTPa... 42 1.2
34gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosom... 42 1.2
35emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete ... 42 1.2
36emb|AL008609.1|MLCB1788 Mycobacterium leprae cosmid B1788 42 1.2
37gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, compl... 42 1.2
38emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 i... 42 1.2
39gb|AC099723.16| Mus musculus chromosome 8, clone RP23-369P21, co... 42 1.2
40gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.8
41gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, co... 40 4.8
42gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.8
43emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 i... 40 4.8
44gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell... 40 4.8
45gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cance... 40 4.8
46gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome... 40 4.8
47gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Can... 40 4.8
48gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 4.8
49gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 40 4.8
50gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, r... 40 4.8
51gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.8
52gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.8
53gb|AC002981.1|AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Sy... 40 4.8 
>gb|AY120886.1| Hordeum vulgare RNase S-like protein mRNA, complete cds
          Length = 905

 Score =  502 bits (253), Expect = e-139
 Identities = 282/292 (96%)
 Strand = Plus / Minus

                                                                       
Query: 73  gcatataggaaagacatagcacaatataatggtccagagttcaggccacagtagcaggta 132
           |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 870 gcatataggaaaaacatagcacaatataatggtccagagttcaggccacaatagcaggta 811

                                                                       
Query: 133 gtttcagttgaggcaccggccgagcgggtggctcttaggcctcggtgggcaaggtgatct 192
           ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 810 gtttcagttgaggcatcggccgagcgggtggctcttaggcctcggtgggcaacgtgatct 751

                                                                       
Query: 193 tggcggacgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcgg 252
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tggcgggcgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcgg 691

                                                                       
Query: 253 ggcagcgcaacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgc 312
           ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 690 ggcagtgcaacttgggcagcttggggcagtcgatgaagatctggccgtccttgtcgacgc 631

                                                               
Query: 313 agaggtagatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 630 agaggtagatctggtagagctgcttcttgccgaacggcccgtccctgcactg 579
to top
>gb|BT009061.1| Triticum aestivum clone wds1c.pk001.m19.f:fis, full insert mRNA
           sequence
          Length = 1062

 Score =  270 bits (136), Expect = 3e-69
 Identities = 222/251 (88%)
 Strand = Plus / Minus

                                                                       
Query: 114 caggccacagtagcaggtagtttcagttgaggcaccggccgagcgggtggctcttaggcc 173
           ||||||||||||| | ||| | |||  |||||| |||| ||  ||||||| ||| |||||
Sbjct: 834 caggccacagtagtacgtactctcaagtgaggcgccggtcggccgggtgggtctcaggcc 775

                                                                       
Query: 174 tcggtgggcaaggtgatcttggcggacgatgtggcgttgagcatccaggtgtggaaggga 233
           || ||||||||  |||||||||| | ||||||||||||||||||||| ||||||||||| 
Sbjct: 774 tcagtgggcaacatgatcttggcaggcgatgtggcgttgagcatccacgtgtggaagggg 715

                                                                       
Query: 234 tggaagaggacctcctcggggcagcgcaacttgggcagcttggggcagtcgatgaaggtc 293
           ||||||||||||||||| |||||  |||  ||||||||||||||||||||||||||||||
Sbjct: 714 tggaagaggacctcctcagggcaatgcagtttgggcagcttggggcagtcgatgaaggtc 655

                                                                       
Query: 294 ttgccgtccttgtcgacgcagaggtagatctggtagagctgcttcttgccgaacggnccg 353
           | ||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 654 tcgccgttcttgtcgacgcagaggtagatctggtagagctgcttcttgccgaatggcccg 595

                      
Query: 354 tccttgcactg 364
           ||| |||||||
Sbjct: 594 tccctgcactg 584
to top
>gb|AF495872.1| Triticum aestivum S-like RNase mRNA, complete cds
          Length = 901

 Score =  256 bits (129), Expect = 4e-65
 Identities = 200/224 (89%)
 Strand = Plus / Minus

                                                                       
Query: 141 tgaggcaccggccgagcgggtggctcttaggcctcggtgggcaaggtgatcttggcggac 200
           |||||| |||||||  ||||||| ||| | ||||| ||||||||  |||||||||| | |
Sbjct: 797 tgaggcgccggccggccgggtgggtctcacgcctcagtgggcaacatgatcttggcaggc 738

                                                                       
Query: 201 gatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcgc 260
           |||||||||||||||||||| |||||||| || ||||||||||||||||| |||||  ||
Sbjct: 737 gatgtggcgttgagcatccacgtgtggaacgggtggaagaggacctcctcagggcaatgc 678

                                                                       
Query: 261 aacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggtag 320
           |  ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 677 agtttgggcagcttggggcagtcgatgatggtctcgccgttcttgtcgacgcagaggtag 618

                                                       
Query: 321 atctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 617 atctggtagagctgcttcttgccgaacggcccgtccctgcactg 574
to top
>gb|AY056038.1| Oryza sativa RNase S-like protein mRNA, complete cds
          Length = 999

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 731 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 672

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 671 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 612

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 611 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 567
to top
>gb|AF439449.1|AF439449 Oryza sativa RNase S-like protein gene, complete cds
          Length = 1909

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
            |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 1642 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 1583

                                                                        
Query: 260  caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
             |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1582 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 1523

                                                         
Query: 320  gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
            ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 1522 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 1478
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                            
Query: 200      cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
                |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 20854870 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 20854929

                                                                            
Query: 260      caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
                 |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 20854930 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 20854989

                                                             
Query: 320      gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
                ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 20854990 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 20855034
to top
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                         
Query: 200   cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
             |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 47096 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 47155

                                                                         
Query: 260   caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
              |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 47156 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 47215

                                                          
Query: 320   gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
             ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 47216 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 47260
to top
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0569E11
          Length = 157319

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                          
Query: 200    cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
              |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 129899 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 129958

                                                                          
Query: 260    caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
               |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 129959 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 130018

                                                           
Query: 320    gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
              ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 130019 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 130063
to top
>dbj|AK119186.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G06, full
           insert sequence
          Length = 930

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>dbj|AK104888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B11, full
           insert sequence
          Length = 997

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 604
to top
>dbj|AK104599.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G01, full
           insert sequence
          Length = 1065

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 604
to top
>dbj|AK104553.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E10, full
           insert sequence
          Length = 1068

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 604
to top
>dbj|AK104509.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G12, full
           insert sequence
          Length = 1069

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>dbj|AK104656.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C11, full
           insert sequence
          Length = 1069

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>dbj|AK104454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A06, full
           insert sequence
          Length = 1068

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 604
to top
>dbj|AK104221.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E03, full
           insert sequence
          Length = 1069

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>dbj|AK098949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M18, full
           insert sequence
          Length = 1052

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>dbj|AK061438.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B06, full
           insert sequence
          Length = 1072

 Score =  139 bits (70), Expect = 7e-30
 Identities = 141/165 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  ||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>gb|AY061961.1| Oryza sativa drought-induced S-like ribonuclease mRNA, complete cds
          Length = 1050

 Score =  131 bits (66), Expect = 2e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                       
Query: 200 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 259
           |||||||| ||||||||||||||||||||| ||||||||||| |||||  | ||||||| 
Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713

                                                                       
Query: 260 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 319
            |  || |||||    ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 712 gaggttaggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653

                                                        
Query: 320 gatctggtagagctgcttcttgccgaacggnccgtccttgcactg 364
           ||||| ||| | ||||||||| || || || |||||| |||||||
Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactg 608
to top
>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds
          Length = 850

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 305 gtcgacgcagaggtagatctggtagagctg 334
           ||||||||||| ||||| ||||||||||||
Sbjct: 628 gtcgacgcagaagtagagctggtagagctg 599
to top
>gb|AC026827.6| Homo sapiens chromosome 8, clone RP11-678C14, complete sequence
          Length = 186183

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    aaacccatattattttttactt 64
             ||||||||||||||||||||||
Sbjct: 66802 aaacccatattattttttactt 66823
to top
>gb|AY107950.1| Zea mays PCO076023 mRNA sequence
          Length = 1046

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 305 gtcgacgcagaggtagatctggtagagctg 334
           ||||||||||| ||||| ||||||||||||
Sbjct: 802 gtcgacgcagaagtagagctggtagagctg 773
to top
>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds
          Length = 1583

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 305  gtcgacgcagaggtagatctggtagagctg 334
            ||||||||||| ||||| ||||||||||||
Sbjct: 1481 gtcgacgcagaagtagagctggtagagctg 1452
to top
>dbj|AP004286.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1425B2, complete
             sequence
          Length = 175274

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    aaacccatattattttttactt 64
             ||||||||||||||||||||||
Sbjct: 98490 aaacccatattattttttactt 98511
to top
>gb|AC164589.6| Mus musculus chromosome 8, clone RP24-363C11, complete sequence
          Length = 197883

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     ccccaaacccatattattttt 59
              |||||||||||||||||||||
Sbjct: 134756 ccccaaacccatattattttt 134736
to top
>ref|XM_535606.2| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 1 (LOC478429), mRNA
          Length = 4345

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1579 gggatggaagaggacctcctc 1599
to top
>ref|XM_843397.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 2 (LOC478429), mRNA
          Length = 4247

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1481 gggatggaagaggacctcctc 1501
to top
>ref|XM_851100.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 9 (LOC478429), mRNA
          Length = 4324

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1558 gggatggaagaggacctcctc 1578
to top
>ref|XM_851054.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 8 (LOC478429), mRNA
          Length = 4324

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1558 gggatggaagaggacctcctc 1578
to top
>ref|XM_851019.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 7 (LOC478429), mRNA
          Length = 4318

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1552 gggatggaagaggacctcctc 1572
to top
>ref|XM_850977.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating
           protein SH3 domain-binding protein 2 isoform a,
           transcript variant 6 (LOC478429), mRNA
          Length = 3662

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 230 gggatggaagaggacctcctc 250
           |||||||||||||||||||||
Sbjct: 896 gggatggaagaggacctcctc 916
to top
>ref|XM_850902.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein
            SH3 domain-binding protein 2 isoform a, transcript
            variant 4 (LOC478429), mRNA
          Length = 4246

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gggatggaagaggacctcctc 250
            |||||||||||||||||||||
Sbjct: 1480 gggatggaagaggacctcctc 1500
to top
>ref|XM_850861.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating
           protein SH3 domain-binding protein 2 isoform a,
           transcript variant 3 (LOC478429), mRNA
          Length = 3619

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 230 gggatggaagaggacctcctc 250
           |||||||||||||||||||||
Sbjct: 853 gggatggaagaggacctcctc 873
to top
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete
             sequence
          Length = 194018

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    ttattttttacttctatatta 72
             |||||||||||||||||||||
Sbjct: 22497 ttattttttacttctatatta 22477
to top
>emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete genome; segment 8/10
          Length = 342300

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 286    tgaaggtcttgccgtccttgt 306
              |||||||||||||||||||||
Sbjct: 111079 tgaaggtcttgccgtccttgt 111059
to top
>emb|AL008609.1|MLCB1788 Mycobacterium leprae cosmid B1788
          Length = 39228

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   tgaaggtcttgccgtccttgt 306
             |||||||||||||||||||||
Sbjct: 15681 tgaaggtcttgccgtccttgt 15661
to top
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence
          Length = 174449

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    ttattttttacttctatatta 72
             |||||||||||||||||||||
Sbjct: 22220 ttattttttacttctatatta 22240
to top
>emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 in linkage group 18,
             complete sequence
          Length = 169038

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 51    attattttttacttctatattagca 75
             |||||||||||||| ||||||||||
Sbjct: 92610 attattttttacttatatattagca 92634
to top
>gb|AC099723.16| Mus musculus chromosome 8, clone RP23-369P21, complete sequence
          Length = 184770

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     ccccaaacccatattattttt 59
              |||||||||||||||||||||
Sbjct: 119219 ccccaaacccatattattttt 119199
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 283    cgatgaaggtcttgccgtccttgt 306
              ||||||||| ||||||||||||||
Sbjct: 813684 cgatgaaggacttgccgtccttgt 813707
to top
>gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, complete sequence
          Length = 198267

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ccaaacccatattatttttt 60
             ||||||||||||||||||||
Sbjct: 47467 ccaaacccatattatttttt 47448
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     tcttgccgtccttgtcgacg 311
               ||||||||||||||||||||
Sbjct: 3366785 tcttgccgtccttgtcgacg 3366766
to top
>emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 in linkage group 17,
             complete sequence
          Length = 161005

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 49    atattattttttacttctatattagcat 76
             |||||||||||||| | |||||||||||
Sbjct: 78869 atattattttttacatatatattagcat 78842
to top
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      tacatatatattattggggg 20
              ||||||||||||||||||||
Sbjct: 150177 tacatatatattattggggg 150158
to top
>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181191

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     tttttacttctatattagcatata 79
              |||||||||||||||| |||||||
Sbjct: 143166 tttttacttctatatttgcatata 143143
to top
>gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome 7, complete sequence
          Length = 194576

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    attagcatataggaaagaca 88
             ||||||||||||||||||||
Sbjct: 39520 attagcatataggaaagaca 39501
to top
>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 209920

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 228   aagggatggaagaggacctcctcg 251
             |||||| |||||||||||||||||
Sbjct: 94376 aagggacggaagaggacctcctcg 94353
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     aggtcttgccgtccttgtcg 308
               ||||||||||||||||||||
Sbjct: 2954542 aggtcttgccgtccttgtcg 2954523



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    aggtcttgccgtccttgtcg 308
              ||||||||||||||||||||
Sbjct: 173335 aggtcttgccgtccttgtcg 173316
to top
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
             sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tacatatatattattggggg 20
             ||||||||||||||||||||
Sbjct: 81718 tacatatatattattggggg 81737
to top
>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone
             DS04710, complete sequence
          Length = 72327

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tacatatatattattggggg 20
             ||||||||||||||||||||
Sbjct: 53242 tacatatatattattggggg 53261
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 285     atgaaggtcttgccgtccttgtcg 308
               |||||||||||||| |||||||||
Sbjct: 2018415 atgaaggtcttgccctccttgtcg 2018392
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     tgaaggtcttgccgtccttg 305
               ||||||||||||||||||||
Sbjct: 1701862 tgaaggtcttgccgtccttg 1701881
to top
>gb|AC002981.1|AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Systems) complete sequence
          Length = 153568

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     ttattttttacttctatatt 71
              ||||||||||||||||||||
Sbjct: 143068 ttattttttacttctatatt 143087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,616,104
Number of Sequences: 3902068
Number of extensions: 3616104
Number of successful extensions: 71101
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70858
Number of HSP's gapped (non-prelim): 243
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top