| Clone Name | baal13j11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF099924.2| Caenorhabditis elegans cosmid K07A9, complete sequence Length = 33460 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ccctccctctcctccgccgctg 154 |||||||||||||||||||||| Sbjct: 14162 ccctccctctcctccgccgctg 14183
>gb|AC021105.13| Homo sapiens BAC clone RP11-163O17 from 4, complete sequence Length = 187360 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 gagtagtggtggcctaagaaag 508 |||||||||||||||||||||| Sbjct: 66636 gagtagtggtggcctaagaaag 66615
>emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5, complete sequence Length = 198456 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 tcctttttcacttcatctcataaac 131 ||||||||||| ||||||||||||| Sbjct: 171264 tcctttttcacatcatctcataaac 171240
>ref|XM_466039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 471 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ccgccgctggatccccttct 165 |||||||||||||||||||| Sbjct: 241 ccgccgctggatccccttct 260
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ctccctctcctccgccgctg 154 |||||||||||||||||||| Sbjct: 92066 ctccctctcctccgccgctg 92047
>ref|XM_366141.1| Magnaporthe grisea 70-15 chromosome IV predicted protein (MG10361.4) partial mRNA Length = 792 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cttcttcatctgcagccaca 180 |||||||||||||||||||| Sbjct: 720 cttcttcatctgcagccaca 701
>ref|XM_426604.1| PREDICTED: Gallus gallus similar to 5-hydroxytryptamine (serotonin) receptor 5A (LOC429047), mRNA Length = 936 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gctggatccccttcttcatc 170 |||||||||||||||||||| Sbjct: 752 gctggatccccttcttcatc 771
>ref|XM_425970.1| PREDICTED: Gallus gallus similar to 5-hydroxytryptamine (serotonin) receptor 5A (LOC428409), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gctggatccccttcttcatc 170 |||||||||||||||||||| Sbjct: 887 gctggatccccttcttcatc 906
>ref|XM_872918.1| PREDICTED: Bos taurus similar to diacylglycerol kinase, theta, transcript variant 5 (LOC518371), mRNA Length = 4239 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ggaggacctccagcaccacg 344 |||||||||||||||||||| Sbjct: 1294 ggaggacctccagcaccacg 1275
>ref|XM_864284.1| PREDICTED: Bos taurus similar to diacylglycerol kinase, theta, transcript variant 3 (LOC518371), mRNA Length = 4233 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ggaggacctccagcaccacg 344 |||||||||||||||||||| Sbjct: 1288 ggaggacctccagcaccacg 1269
>gb|DQ493949.1| Magnaporthe grisea 70-15 clone 25N20 telomere region, partial sequence Length = 41552 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ttggaggacctccagcacca 342 |||||||||||||||||||| Sbjct: 1379 ttggaggacctccagcacca 1360
>gb|AE012975.1| Thermoanaerobacter tengcongensis MB4, section 2 of 244 of the complete genome Length = 7760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctcataaacaccctccctct 142 |||||||||||||||||||| Sbjct: 5523 ctcataaacaccctccctct 5542
>gb|AC140047.8| Mus musculus chromosome 17, clone RP23-233F10, complete sequence Length = 186632 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ttcctttttcacttcatctcataa 129 |||||||||| ||||||||||||| Sbjct: 79266 ttcctttttcccttcatctcataa 79289
>gb|AC006027.5| Homo sapiens BAC clone GS1-114I9 from 7, complete sequence Length = 68769 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 ccttcctttttcacttcatctcat 127 |||||||||||||||| ||||||| Sbjct: 49933 ccttcctttttcacttaatctcat 49910
>gb|BC035260.1| Homo sapiens cDNA clone IMAGE:4837452 Length = 2835 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cttcctttttcacttcatct 124 |||||||||||||||||||| Sbjct: 2775 cttcctttttcacttcatct 2756
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 527 acttccaatatgtctcttcatgtt 550 ||||||||||||||| |||||||| Sbjct: 84011 acttccaatatgtcttttcatgtt 84034
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence Length = 181174 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tgctcctcctccctacgatc 247 |||||||||||||||||||| Sbjct: 86178 tgctcctcctccctacgatc 86197
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccgccgctggatccccttct 165 |||||||||||||||||||| Sbjct: 19228333 ccgccgctggatccccttct 19228314
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cttcctttttcacttcatct 124 |||||||||||||||||||| Sbjct: 59350 cttcctttttcacttcatct 59369
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cttcctttttcacttcatct 124 |||||||||||||||||||| Sbjct: 119158 cttcctttttcacttcatct 119177
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cttcctttttcacttcatct 124 |||||||||||||||||||| Sbjct: 129204 cttcctttttcacttcatct 129223
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccgccgctggatccccttct 165 |||||||||||||||||||| Sbjct: 126582 ccgccgctggatccccttct 126563
>dbj|AK107402.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D11, full insert sequence Length = 2061 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ccctccctctcctccgccgc 152 |||||||||||||||||||| Sbjct: 11 ccctccctctcctccgccgc 30
>gb|AF149774.1|HSNOD1G2 Homo sapiens NOD1 protein (NOD1) gene, exons 4 through 14 and complete cds Length = 34223 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ccttcctttttcacttcatctcat 127 |||||||||||||||| ||||||| Sbjct: 18641 ccttcctttttcacttaatctcat 18664
>gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete sequence Length = 189905 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gctggatccccttcttcatc 170 |||||||||||||||||||| Sbjct: 93528 gctggatccccttcttcatc 93509 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,967,276 Number of Sequences: 3902068 Number of extensions: 4967276 Number of successful extensions: 100208 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100103 Number of HSP's gapped (non-prelim): 105 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)