| Clone Name | baal13i15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 118245 tgattgctcgaggaaggcagcattggagcaat 118214
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 36698 tgattgctcgaggaaggcagcattggagcaat 36667
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 31703428 tgattgctcgaggaaggcagcattggagcaat 31703397
>dbj|AK068767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168B07, full insert sequence Length = 3529 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 3268 tgattgctcgaggaaggcagcattggagcaat 3299
>dbj|AK067242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095J23, full insert sequence Length = 1565 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 1276 tgattgctcgaggaaggcagcattggagcaat 1307
>dbj|AK064902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L17, full insert sequence Length = 2329 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 2074 tgattgctcgaggaaggcagcattggagcaat 2105
>dbj|AK061831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D02, full insert sequence Length = 1142 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 tgattgctcgaggaaggcagcgtgggagcaat 58 ||||||||||||||||||||| | |||||||| Sbjct: 881 tgattgctcgaggaaggcagcattggagcaat 912
>ref|XM_415716.1| PREDICTED: Gallus gallus similar to Myeloperoxidase precursor (MPO) (LOC417467), mRNA Length = 3369 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tatccttgctcttcctcgtgg 80 ||||||||||||||||||||| Sbjct: 2700 tatccttgctcttcctcgtgg 2720
>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine K203, and chemokine ah294 genes, complete cds Length = 112034 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tatccttgctcttcctcgtgg 80 ||||||||||||||||||||| Sbjct: 94705 tatccttgctcttcctcgtgg 94685
>emb|BX255952.9| Zebrafish DNA sequence from clone CH211-267P8 in linkage group 24, complete sequence Length = 121889 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 268 tgaaacattgtaatttaactgcatt 292 |||||||||||||||||| |||||| Sbjct: 80171 tgaaacattgtaatttaattgcatt 80195
>gb|AC163211.5| Mus musculus chromosome 7, clone RP24-341C24, complete sequence Length = 148004 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cttaatattggtgatgaatg 318 |||||||||||||||||||| Sbjct: 105609 cttaatattggtgatgaatg 105628
>emb|AL604027.9| Mouse DNA sequence from clone RP23-155G20 on chromosome 11, complete sequence Length = 196398 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tcttaatattggtgatgaat 317 |||||||||||||||||||| Sbjct: 96971 tcttaatattggtgatgaat 96990
>gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197426 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ggaaggcagcgtgggagcaa 57 |||||||||||||||||||| Sbjct: 147320 ggaaggcagcgtgggagcaa 147301
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gaggaaggcagcgtgggagc 55 |||||||||||||||||||| Sbjct: 15488611 gaggaaggcagcgtgggagc 15488630
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 aaacattgtaatttaactgc 289 |||||||||||||||||||| Sbjct: 32840768 aaacattgtaatttaactgc 32840749
>gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complete sequence Length = 152996 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ttaactgcattggcattctt 301 |||||||||||||||||||| Sbjct: 5386 ttaactgcattggcattctt 5367
>gb|AC069070.19| Homo sapiens 3 BAC RP11-575H20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154828 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tatactgtcagcgtgatgtg 182 |||||||||||||||||||| Sbjct: 81547 tatactgtcagcgtgatgtg 81528
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 aaacattgtaatttaactgc 289 |||||||||||||||||||| Sbjct: 62173 aaacattgtaatttaactgc 62154
>gb|AC102906.12| Mus musculus chromosome 7, clone RP24-291N22, complete sequence Length = 132746 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cttaatattggtgatgaatg 318 |||||||||||||||||||| Sbjct: 91356 cttaatattggtgatgaatg 91337
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gaggaaggcagcgtgggagc 55 |||||||||||||||||||| Sbjct: 15442894 gaggaaggcagcgtgggagc 15442913
>emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb0066P16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126680 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gaggaaggcagcgtgggagc 55 |||||||||||||||||||| Sbjct: 13876 gaggaaggcagcgtgggagc 13857
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tagggcagagttggtggtgt 256 |||||||||||||||||||| Sbjct: 93496 tagggcagagttggtggtgt 93477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,429,965 Number of Sequences: 3902068 Number of extensions: 2429965 Number of successful extensions: 41500 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41412 Number of HSP's gapped (non-prelim): 88 length of query: 342 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 320 effective length of database: 17,147,199,772 effective search space: 5487103927040 effective search space used: 5487103927040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)