ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 573 bits (289), Expect = e-160 Identities = 475/537 (88%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagat 67 |||||||| || |||||||||||||||||||| || ||||| || ||| | || |||||| Sbjct: 1352 gcaatgaacaagctaaagaagatggcccttagggtcattgctgaaaatttatcggaagat 1411 Query: 68 gaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggccaaatc 127 |||||||| || |||||||| |||||||||||| |||||||||| |||||||| || ||| Sbjct: 1412 gaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggtcagatc 1471 Query: 128 acattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagagtcagaa 187 |||||||||||||||||||||||||||| |||||||||||| || || || || || ||| Sbjct: 1472 acattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggattcggaa 1531 Query: 188 attgcaactctaatggaagcggcggatattgataacagtgggtcaattgattatggggag 247 ||| |||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1532 attacaaccctaatggaagcggctgatattgataatagtggttcaatagattatggggag 1591 Query: 248 ttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgtttgcagca 307 ||| |||| ||||| ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1592 ttcattgctgcaactatgcatctgaacaaagttgagagagaagataatctttttgcagcg 1651 Query: 308 ttctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaaaaagca 367 || |||||||| |||||||| ||||||||||||||||||||||||| || |||||||| Sbjct: 1652 ttttcatactttgataaagacagcagtggttacattactcaagatgagctacaaaaagcc 1711 Query: 368 tgtgaagagtttggtataggagatgcacatcttgacgatattatccgagacattgatcaa 427 ||||| || ||||| ||||||||||||||||| || ||||| ||| ||| |||||||| Sbjct: 1712 tgtgaggaatttggcataggagatgcacatctggaggatatcatcaaagatattgatcag 1771 Query: 428 gacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1772 gacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaagggaataat 1831 Query: 488 ccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 544 ||||||||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 1832 ccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 1888
>dbj|AK068414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A17, full insert sequence Length = 2391 Score = 557 bits (281), Expect = e-155 Identities = 473/537 (88%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagat 67 |||||||| || |||||||||||||||||||| || ||||| || ||| | || |||||| Sbjct: 1352 gcaatgaacaagctaaagaagatggcccttagggtcattgctgaaaatttatcggaagat 1411 Query: 68 gaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggccaaatc 127 |||||||| | |||||||| |||||||||||| |||||||||| |||||||| || ||| Sbjct: 1412 gaaattgcgagattgagagaaatgttcaaaatgttggacactgataatagtggtcagatc 1471 Query: 128 acattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagagtcagaa 187 |||||||||||||||||||||||||||| |||||||||||| || || || || || ||| Sbjct: 1472 acattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggattcggaa 1531 Query: 188 attgcaactctaatggaagcggcggatattgataacagtgggtcaattgattatggggag 247 ||| |||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1532 attacaaccctaatggaagcggctgatattgataatagtggttcaatagattatggggag 1591 Query: 248 ttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgtttgcagca 307 ||| |||| ||||| ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1592 ttcattgctgcaactatgcatctgaacaaagttgagagagaagataatctttttgcagcg 1651 Query: 308 ttctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaaaaagca 367 || |||||||| |||||||| ||||||||||||||||||||||||| || |||||||| Sbjct: 1652 ttttcatactttgataaagacagcagtggttacattactcaagatgagctacaaaaagcc 1711 Query: 368 tgtgaagagtttggtataggagatgcacatcttgacgatattatccgagacattgatcaa 427 ||||| || ||||| ||||||||||||||||| || ||||| ||| ||| |||||||| Sbjct: 1712 tgtgaggaatttggcataggagatgcacatctggaggatatcatcaaagatattgatcag 1771 Query: 428 gacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 1772 gacaatgatggccggatcgactacaatgaatttgtaacaatgatgcggaaagggaataat 1831 Query: 488 ccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 544 ||||||||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 1832 ccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 1888
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 ||||||||||| ||||| ||||| ||||||||||||||| |||| ||||| |||||||| Sbjct: 3322566 gatattgataatagtggttcaatagattatggggagttcattgctgcaactatgcatctg 3322507 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| |||||||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct: 3322506 aacaaagttgagagagaagataatctttttgcagcgttttcatactttgataaagacagc 3322447 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 ||||||||||||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 3322446 agtggttacattactcaagatgagctacaaaaagcctgtgaggaatttggcataggagat 3322387 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 |||||||| || ||||| ||| ||| |||||||| ||||||| Sbjct: 3322386 gcacatctggaggatatcatcaaagatattgatcaggacaatg 3322344 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 |||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 3323099 gaagatgaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggt 3323040 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 181 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 3323039 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 3322980 Query: 182 tcagaaattgcaactctaatggaagcgg 209 || |||||| |||| ||||||||||||| Sbjct: 3322979 tcggaaattacaaccctaatggaagcgg 3322952 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataatccacta 493 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 3322251 gatggccggatcgactacaatgaatttgtaacaatgatgcagaaagggaataatccacta 3322192 Query: 494 gggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 544 ||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 3322191 gggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 3322141 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| || |||||||||||||||||||| Sbjct: 3323239 gcaatgaacaagctaaagaagatggcccttag 3323208 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 tggacactgacaatagtggcca 123 |||||||||||||||||||||| Sbjct: 19651444 tggacactgacaatagtggcca 19651465 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 tggacactgacaatagtggcca 123 |||||||||||||||||||||| Sbjct: 19592263 tggacactgacaatagtggcca 19592242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tggacactgacaatagtggcc 122 ||||||||||||||||||||| Sbjct: 19705836 tggacactgacaatagtggcc 19705856
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 ||||||||||| ||||| ||||| ||||||||||||||| |||| ||||| |||||||| Sbjct: 132259 gatattgataatagtggttcaatagattatggggagttcattgctgcaactatgcatctg 132200 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| |||||||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct: 132199 aacaaagttgagagagaagataatctttttgcagcgttttcatactttgataaagacagc 132140 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 ||||||||||||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 132139 agtggttacattactcaagatgagctacaaaaagcctgtgaggaatttggcataggagat 132080 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 |||||||| || ||||| ||| ||| |||||||| ||||||| Sbjct: 132079 gcacatctggaggatatcatcaaagatattgatcaggacaatg 132037 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 |||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 132792 gaagatgaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggt 132733 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 181 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 132732 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 132673 Query: 182 tcagaaattgcaactctaatggaagcgg 209 || |||||| |||| ||||||||||||| Sbjct: 132672 tcggaaattacaaccctaatggaagcgg 132645 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataatccacta 493 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 131944 gatggccggatcgactacaatgaatttgtaacaatgatgcagaaagggaataatccacta 131885 Query: 494 gggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 544 ||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 131884 gggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 131834 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| || |||||||||||||||||||| Sbjct: 132932 gcaatgaacaagctaaagaagatggcccttag 132901
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 140270 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 140211 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 140210 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 140151 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 140150 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 140091 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 140090 acccgtattgaggatattattggagacattgatcaggacaatg 140048 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 140845 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 140786 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 168 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 140785 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 140739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 139971 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 139918 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| ||||||||||| ||||| ||||| Sbjct: 140981 gcaatgaacaaactaaagaaaatggcgcttag 140950
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 32488142 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 32488083 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 32488082 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 32488023 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 32488022 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 32487963 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 32487962 acccgtattgaggatattattggagacattgatcaggacaatg 32487920 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 32488717 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 32488658 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 168 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 32488657 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 32488611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 32487843 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 32487790 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| ||||||||||| ||||| ||||| Sbjct: 32488853 gcaatgaacaaactaaagaaaatggcgcttag 32488822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 32578652 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 32578593 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 32578592 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 32578533 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 32578532 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 32578473 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 32578472 acccgtattgaggatattattggagacattgatcaggacaatg 32578430 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 32579227 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 32579168 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 168 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 32579167 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 32579121 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 32578353 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 32578300 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| ||||||||||| ||||| ||||| Sbjct: 32579363 gcaatgaacaaactaaagaaaatggcgcttag 32579332
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 21591 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 21532 Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 21531 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 21472 Query: 332 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 391 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 21471 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 21412 Query: 392 gcacatcttgacgatattatccgagacattgatcaagacaatg 434 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 21411 acccgtattgaggatattattggagacattgatcaggacaatg 21369 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 62 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 121 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 22166 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 22107 Query: 122 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 168 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 22106 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 22060 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 434 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 487 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 21292 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 21239 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggcccttag 39 |||||||| ||||||||||| ||||| ||||| Sbjct: 22302 gcaatgaacaaactaaagaaaatggcgcttag 22271
>emb|AJ344154.1|NTA344154 Nicotiana tabacum mRNA for calcium-dependent protein kinase 2 (cdpk2 gene) Length = 2019 Score = 111 bits (56), Expect = 3e-21 Identities = 215/268 (80%) Strand = Plus / Plus Query: 216 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 275 |||||||||| || |||||||||||||||| || | || |||||||| ||| | |||| Sbjct: 1492 ttgataacagcggcacaattgattatggggaatttatagctgcaacattacattttaaca 1551 Query: 276 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 335 | |||| ||||||||| |||| ||||| || ||||| ||||| |||||||||||||||| Sbjct: 1552 aaattgaaagagaagatcatctatttgctgctttctcttactttgataaagatggcagtg 1611 Query: 336 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagatgcac 395 | |||||||| ||| || || ||| |||| ||||| || |||||||| || |||| | Sbjct: 1612 gctacattaccgcagacgagcttcaacaagcttgtgaggaatttggtattggggatgtcc 1671 Query: 396 atcttgacgatattatccgagacattgatcaagacaatgatggccggatcgactacaatg 455 |||| || ||||| || ||||| |||||| ||||||||||| || || || ||||||| Sbjct: 1672 atctagaagatatgataagagacgctgatcaggacaatgatggacgaattgattacaatg 1731 Query: 456 aatttgtaacaatgatgcagaagggaaa 483 | || || | |||||||| |||||||| Sbjct: 1732 agttcgttgctatgatgcaaaagggaaa 1759
>emb|AJ344156.1|NBE344156 Nicotiana benthamiana mRNA for calcium-dependent protein kinase 2 (cdpk2 gene) Length = 1746 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 216 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 275 |||||||||| || |||||||||||||||| || | || |||||||| ||| | |||| Sbjct: 1403 ttgataacagcggcacaattgattatggggaatttatagctgcaacattacattttaaca 1462 Query: 276 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 335 | |||| ||||||||| |||| ||||| || ||||| ||||| ||||||||| |||||| Sbjct: 1463 aaattgaaagagaagatcatctatttgctgctttctcttactttgataaagattgcagtg 1522 Query: 336 gttacattact 346 | ||||||||| Sbjct: 1523 gctacattact 1533 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 59 tctgaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagt 118 |||||||| |||||||| || ||| ||| ||||||| ||| | || |||||||||||| Sbjct: 1246 tctgaagaagaaattgctggtctgaaagaaatgttcaggatgatagatactgacaatagt 1305 Query: 119 ggccaaat 126 || ||||| Sbjct: 1306 ggtcaaat 1313
>emb|AJ344155.1|NTA344155 Nicotiana tabacum mRNA for calcium-dependent protein kinase 3 (cdpk3 gene) Length = 2437 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 216 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 275 ||||||||||||| ||||||||||||| || || | || |||||||| ||| |||||| Sbjct: 1767 ttgataacagtggaacaattgattatggtgaatttatagctgcaacattacatatgaaca 1826 Query: 276 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 335 | |||| ||| ||||| |||| ||||| || |||| ||||||||||||||||| |||| Sbjct: 1827 aaattgaaagacaagatcatctttttgctgctttctgttacttcgataaagatggaagtg 1886 Query: 336 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttgg 381 | ||||| ||| ||||| || ||| |||| |||||||| ||||| Sbjct: 1887 gctacatcactgcggatgagcttcaacaagcttgtgaagaatttgg 1932
>dbj|AB051808.1| Solanum tuberosum RiCDPK1 mRNA for calcium dependent protein kinase, complete cds Length = 2393 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 216 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 275 ||||||||||||| ||||||||||||| || || | || |||||||| ||| |||||| Sbjct: 1878 ttgataacagtggaacaattgattatggtgaatttatagctgcaacattacatatgaaca 1937 Query: 276 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 335 | |||| ||| ||||| |||| ||||| || |||| ||||||||||||||||| |||| Sbjct: 1938 aaattgaaagacaagatcatctttttgctgctttctgttacttcgataaagatggaagtg 1997 Query: 336 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttgg 381 | ||||| ||| ||||| || ||| |||| |||||||| ||||| Sbjct: 1998 gctacatcactgcggatgagcttcaacaagcttgtgaagaatttgg 2043
>gb|AY753553.1| Vicia faba calcium-dependent protein kinase 2 (CPK2) mRNA, partial cds Length = 1299 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 218 gataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaacaag 277 ||||| ||||| ||||||||||| | || ||| | || |||||||||||| ||||||| Sbjct: 808 gataatagtggcacaattgattatagagaattcatagctgcaacattgcatttgaacaaa 867 Query: 278 gttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtggt 337 |||| || ||||||||| | || |||| || ||||| || |||||||| || ||||| Sbjct: 868 gttggtagggaagataatttagttacagctttttcatattttgataaagacggaagtggc 927 Query: 338 tacattactcaagatga 354 ||||| ||||||||||| Sbjct: 928 tacatcactcaagatga 944
>dbj|AK059003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H02, full insert sequence Length = 572 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 485 aatccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 544 |||||||||||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 8 aatccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 67
>gb|DQ071551.1| Brassica napus putative calcium dependent kinase 6 mRNA, partial cds Length = 1608 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 ||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |||| Sbjct: 1503 ttgatcaagacaatgatggacggattgactatggagaatttgttgcaatgatgcaaaagg 1562 Query: 480 gaaat 484 ||||| Sbjct: 1563 gaaat 1567 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1091 gcaatgaataaattaaagaagatggc 1116
>gb|DQ071550.1| Brassica rapa subsp. pekinensis putative calcium dependent kinase 6 mRNA, partial cds Length = 1614 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 ||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |||| Sbjct: 1509 ttgatcaagacaatgatggacggattgactatggagaatttgttgcaatgatgcaaaagg 1568 Query: 480 gaaat 484 ||||| Sbjct: 1569 gaaat 1573 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1097 gcaatgaataaattaaagaagatggc 1122 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 tacttcgataaagatggcagtggttacat 342 ||||| ||||||||||| ||||||||||| Sbjct: 1403 tactttgataaagatggaagtggttacat 1431
>gb|AY247754.1| Glycine max seed calcium dependent protein kinase a mRNA, complete cds Length = 1524 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgc 255 ||||| || |||||||||||||| |||||| ||||||||||||| || ||| |||| Sbjct: 1135 atggatgctgcggatattgataaaagtgggacaattgattatggngaattcattgc 1190
>gb|AY030280.1| Psophocarpus tetragonolobus calcium-dependent protein kinase mRNA, partial cds Length = 1041 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatgg 243 ||||| || |||||||||||||| |||||| ||||||||||||| Sbjct: 790 atggatgctgcggatattgataaaagtgggacaattgattatgg 833
>gb|M64987.1|SOYCADPK Glycine max calcium dependent protein kinase mRNA Length = 1768 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatgg 243 ||||| || |||||||||||||| |||||| ||||||||||||| Sbjct: 1269 atggatgctgcggatattgataaaagtgggacaattgattatgg 1312
>ref|NM_119697.2| Arabidopsis thaliana CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase> AT4G35310 (CPK5) mRNA, complete cds Length = 2176 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||||||||||||||| Sbjct: 1273 gcaatgaataaactaaagaagatggc 1298
>ref|NM_129449.1| Arabidopsis thaliana CPK20; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein se> AT2G38910 (CPK20) mRNA, complete cds Length = 1752 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Plus Query: 198 taatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcgg 257 ||||| |||| |||||||| |||||||||||| |||| || ||||| ||||| | || | Sbjct: 1436 taatgcaagcagcggatatagataacagtgggacaatagactatggagagtttatagcag 1495 Query: 258 caacattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatact 317 ||| ||||| ||||||| | |||| |||||| || |||| |||||||||| |||| Sbjct: 1496 caatggtgcatttgaacaaaatagagaaagaagaccatttgttcacagcattctcttact 1555 Query: 318 tcgataaagatggcagtggtta 339 | || ||||||| |||||||| Sbjct: 1556 ttgaccaagatggaagtggtta 1577
>ref|NM_111902.1| Arabidopsis thaliana CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calcium- and calmodulin-dependent protein kinase/ kinase AT3G10660 (CPK2) mRNA, complete cds Length = 2142 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaa 477 ||||||||||||| ||||| || || |||||||| || ||||| ||||||||||||| Sbjct: 1814 ttgatcaagacaaggatggacgaatagactacaacgagtttgtggcaatgatgcagaa 1871
>emb|AJ007366.1|ZMA7366 Zea mays mRNA for calcium-dependent protein kinase Length = 2566 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 11 atgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagatgaa 70 |||||||| || ||||||||||| ||||| || || |||||||| ||||| || || || Sbjct: 1618 atgaataagctgaagaagatggctcttagggtgatcgccgagaacctgtcggaggacgag 1677 Query: 71 attgcagggttgagagagatgttcaa 96 || || ||| |||| ||||||||||| Sbjct: 1678 atcgccgggctgagggagatgttcaa 1703
>gb|DQ071549.1| Brassica oleracea var. alboglabra calcium dependent kinase 5 mRNA, partial cds Length = 1608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||||||||||||||| Sbjct: 1091 gcaatgaataaactaaagaagatggc 1116
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||||||||||||||| Sbjct: 68430 gcaatgaataaactaaagaagatggc 68455
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||||||||||||||| Sbjct: 34921 gcaatgaataaactaaagaagatggc 34896
>gb|AY072802.1| Cucurbita maxima calmodulin-like-domain protein kinase CPK2 mRNA, complete cds Length = 2214 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatggggagtt 249 ||||||||||| |||||||| || |||||| | || |||||||||||||| Sbjct: 1470 atggaagcggctgatattgacaatagtgggactatagattatggggagtt 1519
>gb|U31834.1|ATU31834 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 5 (CPK5) mRNA, complete cds Length = 1967 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||||||||||||||| Sbjct: 1235 gcaatgaataaactaaagaagatggc 1260
>gb|U31833.1|ATU31833 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 2 (CPK2) mRNA, complete cds Length = 2142 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaa 477 ||||||||||||| ||||| || || |||||||| || ||||| ||||||||||||| Sbjct: 1814 ttgatcaagacaaggatggacgaatagactacaacgagtttgtggcaatgatgcagaa 1871
>gb|AY109374.1| Zea mays CL146_1 mRNA sequence Length = 2566 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 11 atgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagatgaa 70 |||||||| || ||||||||||| ||||| || || |||||||| ||||| || || || Sbjct: 1618 atgaataagctgaagaagatggctcttagggtgatcgccgagaacctgtcggaggacgag 1677 Query: 71 attgcagggttgagagagatgttcaa 96 || || ||| |||| ||||||||||| Sbjct: 1678 atcgccgggctgagggagatgttcaa 1703
>ref|NM_117025.4| Arabidopsis thaliana CPK4; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein ser> AT4G09570 (CPK4) mRNA, complete cds Length = 1696 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 195 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 254 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1145 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1204 Query: 255 cggcaacattgcatctgaacaaggttgagagagaaga 291 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1205 cagcgacattacatataaacaagatggagagagaaga 1241
>gb|U31752.1|ATU31752 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 4 (CPK4) mRNA, partial cds Length = 1657 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 195 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 254 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1106 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1165 Query: 255 cggcaacattgcatctgaacaaggttgagagagaaga 291 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1166 cagcgacattacatataaacaagatggagagagaaga 1202
>emb|BX827366.1|CNS0A2CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1676 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 195 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 254 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1149 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1208 Query: 255 cggcaacattgcatctgaacaaggttgagagagaaga 291 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1209 cagcgacattacatataaacaagatggagagagaaga 1245
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 48.1 bits (24), Expect = 0.034 Identities = 105/132 (79%) Strand = Plus / Minus Query: 208 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 267 ||||||||| |||||||||||| |||| || ||||| ||||| | || |||| |||| Sbjct: 17723 ggcggatatagataacagtgggacaatagactatggagagtttatagcagcaatggtgca 17664 Query: 268 tctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaaga 327 | ||||||| | |||| |||||| || |||| |||||||||| ||||| || |||| Sbjct: 17663 tttgaacaaaatagagaaagaagaccatttgttcacagcattctcttactttgaccaaga 17604 Query: 328 tggcagtggtta 339 ||| |||||||| Sbjct: 17603 tggaagtggtta 17592
>ref|NM_127284.2| Arabidopsis thaliana CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase> AT2G17290 (CPK6) mRNA, complete cds Length = 2332 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 422 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 481 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1816 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1875 Query: 482 aat 484 ||| Sbjct: 1876 aat 1878 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1402 gcaatgaataaattaaagaagatggc 1427
>ref|NM_120569.2| Arabidopsis thaliana CPK1; calcium- and calmodulin-dependent protein kinase/ kinase AT5G04870 (CPK1) mRNA, complete cds Length = 2526 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 2167 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 2226 Query: 480 gaa 482 ||| Sbjct: 2227 gaa 2229
>gb|AY753552.1| Vicia faba calcium-dependent protein kinase 1 (CPK1) mRNA, complete cds Length = 1783 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 |||||| | |||||||| || ||||| || | |||||||| ||||| || |||||||| Sbjct: 1316 aacaagctggagagagaggaaaatctcttgtctgcattctcctactttgacaaagatgga 1375 Query: 332 agtggttacat 342 ||||||||||| Sbjct: 1376 agtggttacat 1386
>gb|AY140007.1| Arabidopsis thaliana putative calmodulin-domain protein kinase CPK6 (At2g17290) mRNA, complete cds Length = 2197 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 422 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 481 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1776 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1835 Query: 482 aat 484 ||| Sbjct: 1836 aat 1838 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1362 gcaatgaataaattaaagaagatggc 1387
>gb|U31835.1|ATU31835 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 6 (CPK6) mRNA, complete cds Length = 2036 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 422 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 481 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1575 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1634 Query: 482 aat 484 ||| Sbjct: 1635 aat 1637 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1161 gcaatgaataaattaaagaagatggc 1186
>gb|AY247755.1| Glycine max seed calcium dependent protein kinase b mRNA, complete cds Length = 1473 Score = 46.1 bits (23), Expect = 0.14 Identities = 113/143 (79%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcggca 259 ||||||||||| ||||| || |||| ||| ||||| || ||||| || || ||||| || Sbjct: 1105 atggaagcggctgatatagacaacaatggatcaatagactatggtgaatttcttgctgct 1164 Query: 260 acattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttc 319 ||| |||| |||| ||| | || ||||| || ||| || |||| || ||| | || || Sbjct: 1165 acactgcacttgaataagatggaaagagaggagaatttggttgctgctttcgcctatttt 1224 Query: 320 gataaagatggcagtggttacat 342 ||||||||||| ||||||||||| Sbjct: 1225 gataaagatggtagtggttacat 1247 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||| ||||||||||| Sbjct: 913 gcaatgaataaacttaagaagatggc 938
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 18142173 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 18142232 Query: 332 agtggttacat 342 ||||| ||||| Sbjct: 18142233 agtggatacat 18142243
>gb|BT005932.1| Arabidopsis thaliana At5g04870 gene, complete cds Length = 1833 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 1706 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 1765 Query: 480 gaa 482 ||| Sbjct: 1766 gaa 1768
>gb|BT002600.1| Arabidopsis thaliana putative calmodulin-domain protein kinase CPK6 (At2g17290) mRNA, complete cds Length = 1735 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 422 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 481 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1513 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1572 Query: 482 aat 484 ||| Sbjct: 1573 aat 1575 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1099 gcaatgaataaattaaagaagatggc 1124
>dbj|D28582.1|ATHATCDPK Arabidopsis thaliana mRNA for calcium-dependent protein kinase, complete cds Length = 1858 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 422 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 481 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1437 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1496 Query: 482 aat 484 ||| Sbjct: 1497 aat 1499 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 1023 gcaatgaataaattaaagaagatggc 1048
>dbj|AK118706.1| Arabidopsis thaliana At5g04870 mRNA for putative calcium-dependent protein kinase, complete cds, clone: RAFL21-01-N11 Length = 2521 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 2167 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 2226 Query: 480 gaa 482 ||| Sbjct: 2227 gaa 2229
>gb|AF051211.1|AF051211 Picea mariana probable calcium dependent protein kinase (Sb15) mRNA, partial cds Length = 1179 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagat 67 |||||||||||| | ||||||||||| |||| ||||| || || | |||| || || Sbjct: 262 gcaatgaataaattgaagaagatggcacttatggtaatagctgaaagcttgtcagaggaa 321 Query: 68 gaaattgcagggttgagagagatgttc 94 || |||||||| ||||||||||||||| Sbjct: 322 gagattgcaggtttgagagagatgttc 348
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 18068494 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 18068553 Query: 332 agtggttacat 342 ||||| ||||| Sbjct: 18068554 agtggatacat 18068564
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 272 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 331 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 95851 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 95910 Query: 332 agtggttacat 342 ||||| ||||| Sbjct: 95911 agtggatacat 95921
>gb|AY301062.2| Zea mays calcium-dependent protein kinase ZmCPK11 mRNA, complete cds Length = 1738 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 195 ctctaatggaagcggcggatattgataacag 225 ||||||||||||| || |||||||||||||| Sbjct: 1166 ctctaatggaagcagctgatattgataacag 1196
>gb|U69173.1|GMU69173 Glycine max calmodulin-like domain protein kinase isoenzyme beta mRNA, complete cds Length = 1754 Score = 46.1 bits (23), Expect = 0.14 Identities = 113/143 (79%) Strand = Plus / Plus Query: 200 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcggca 259 ||||||||||| ||||| || |||| ||| ||||| || ||||| || || ||||| || Sbjct: 1161 atggaagcggctgatatagacaacaatggatcaatagactatggtgaatttcttgctgct 1220 Query: 260 acattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttc 319 ||| |||| |||| ||| | || ||||| || ||| || |||| || ||| | || || Sbjct: 1221 acactgcacttgaataagatggaaagagaggagaatttggttgctgctttcgcctatttt 1280 Query: 320 gataaagatggcagtggttacat 342 ||||||||||| ||||||||||| Sbjct: 1281 gataaagatggtagtggttacat 1303 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||||| ||||||||||| Sbjct: 969 gcaatgaataaacttaagaagatggc 994
>gb|L15390.1|MZECDPK Zea mays calcium dependent protein kinase (CDPK) mRNA, partial cds Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 300 ttgcagcattctcatacttcgataaagatggcagtggttacattact 346 |||||||||| || || || || |||||| ||||||||||||||||| Sbjct: 1184 ttgcagcattttcctattttgacaaagatagcagtggttacattact 1230
>gb|L14771.1|ATHCALLIPR Arabidopsis thaliana calcium dependent protein kinase (AK1 isoform) mRNA, complete cds Length = 2214 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 420 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 479 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 1855 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 1914 Query: 480 gaa 482 ||| Sbjct: 1915 gaa 1917
>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence Length = 202201 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 aagagtcagaaattgcaactct 198 |||||||||||||||||||||| Sbjct: 73096 aagagtcagaaattgcaactct 73117
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE Length = 124859 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 gcaatgaataaactaaagaagatggc 33 ||||||||||| |||||||||||||| Sbjct: 30203 gcaatgaataagctaaagaagatggc 30178
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 actacaatgaatttgtaacaat 468 |||||||||||||||||||||| Sbjct: 293794 actacaatgaatttgtaacaat 293815
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 actacaatgaatttgtaacaat 468 |||||||||||||||||||||| Sbjct: 42393 actacaatgaatttgtaacaat 42414
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 actacaatgaatttgtaacaat 468 |||||||||||||||||||||| Sbjct: 189292 actacaatgaatttgtaacaat 189313
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggc 33 |||||||||||| ||||||||||||| Sbjct: 19260 gcaatgaataaattaaagaagatggc 19285
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 tggacactgacaatagtggcca 123 |||||||||||||||||||||| Sbjct: 135607 tggacactgacaatagtggcca 135586
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 tggacactgacaatagtggcca 123 |||||||||||||||||||||| Sbjct: 90094 tggacactgacaatagtggcca 90115 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 tggacactgacaatagtggcca 123 |||||||||||||||||||||| Sbjct: 30913 tggacactgacaatagtggcca 30892
>gb|U90262.1|CPU90262 Cucurbita pepo calcium-dependent calmodulin-independent protein kinase CDPK (cpCPK1) mRNA, complete cds Length = 2550 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Plus Query: 89 atgttcaaaatgctggacactgacaatagtggccaaatcacattggaggaactaaaaact 148 |||||||| ||| | || |||||||| || |||||||||||||| || ||||| ||| || Sbjct: 1845 atgttcaagatgatagatactgacaacagcggccaaatcacatttgaagaactcaaagct 1904 Query: 149 gg 150 || Sbjct: 1905 gg 1906 Score = 42.1 bits (21), Expect = 2.1 Identities = 108/137 (78%) Strand = Plus / Plus Query: 242 ggggagttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgttt 301 ||||||||| | || || ||||||||||| ||||| | |||| |||||| |||| | Sbjct: 1998 ggggagttcgtagctgccacattgcatctaaacaaaatcgagaaggaagatcatcttcta 2057 Query: 302 gcagcattctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaa 361 ||||| || ||||| ||||| |||||||| || || | |||||| || || || || ||| Sbjct: 2058 gcagcgttttcatatttcgacaaagatggaagcgggttcattacccacgacgagcttcaa 2117 Query: 362 aaagcatgtgaagagtt 378 |||||||| ||||||| Sbjct: 2118 caagcatgtaaagagtt 2134
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 aagagtcagaaattgcaactct 198 |||||||||||||||||||||| Sbjct: 164787 aagagtcagaaattgcaactct 164766
>ref|NM_122264.3| Arabidopsis thaliana CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinas> AT5G23580 (CDPK9) mRNA, complete cds Length = 1974 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 206 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 265 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1207 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1266 Query: 266 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 325 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1267 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1326 Query: 326 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 385 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1327 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1386 Query: 386 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 438 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1387 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1439
>ref|NM_119985.2| Arabidopsis thaliana CPK26; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein se> AT4G38230 (CPK26) mRNA, complete cds Length = 1800 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 1234 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 1293 Query: 272 aacaa 276 ||||| Sbjct: 1294 aacaa 1298
>gb|AY394009.1| Vitis labrusca x Vitis vinifera calcium-dependent protein kinase (VCPK1) mRNA, complete cds Length = 1714 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 attgataacagtgggtcaattgattatggggagttccttgc 255 ||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 1221 attgacaacagtggaacaatagattatggggaattccttgc 1261
>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete sequence Length = 174731 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 126978 caatgaatttgtcacaatgatggagaaaggaaa 127010
>emb|CR719968.2|CNS0GIH2 Tetraodon nigroviridis full-length cDNA Length = 1174 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgactacaatgaatttgtaac 465 ||||||||||||||||||||| Sbjct: 389 cgactacaatgaatttgtaac 409
>emb|BX255923.13| Human DNA sequence from clone RP11-115J7 on chromosome 9 Contains the 5' end of a pseudogene similar to part of phosphoglucomutase 5 (PGRM) (PGM5), a novel gene, the gene for a novel forkhead box D4 (FOXD4) protein, the gene for a novel protein similar to COBW domain containing 1 (CBWD1) and four CpG islands, complete sequence Length = 179342 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 127138 caatgaatttgtcacaatgatggagaaaggaaa 127106
>emb|AL591385.7| Human DNA sequence from clone RP11-391M20 on chromosome 9 Contains a novel gene similar to phosphoglucomutase 5 (PGM5), a pseudogene similar to part of FSHD region gene 1 (FRG1) and two CpG island, complete sequence Length = 174765 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 149125 caatgaatttgtcacaatgatggagaaaggaaa 149157
>emb|AL449043.16| Human DNA sequence from clone RP11-143M1 on chromosome 9 Contains four novel genes, the FOXD4 gene for forkhead box D4 (FKHL9, FREAC5), a novel pseudogene similar to phosphoglucomutase 5 (PGM5), the 3' end of the COBW-like protein (LOC55871) and three CpG islands, complete sequence Length = 97906 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 44935 caatgaatttgtcacaatgatggagaaaggaaa 44967
>emb|AL353608.20| Human DNA sequence from clone RP11-561O23 on chromosome 9 Contains four novel genes, the CBWD3 gene for COBW domain containing 3, the FOXD4L3 gene for forkhead box D4 like 3, the 5' end of the PGM5 gene for phosphoglucomutase 5, and four CpG islands, complete sequence Length = 172991 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 133014 caatgaatttgtcacaatgatggagaaaggaaa 132982
>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete sequence Length = 150130 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 102378 caatgaatttgtcacaatgatggagaaaggaaa 102410
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cagtggttacattactcaaga 351 ||||||||||||||||||||| Sbjct: 48116 cagtggttacattactcaaga 48136
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 38352 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 38293 Query: 272 aacaa 276 ||||| Sbjct: 38292 aacaa 38288
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 117430 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 117371 Query: 272 aacaa 276 ||||| Sbjct: 117370 aacaa 117366
>emb|AL445925.19| Human DNA sequence from clone RP11-403A15 on chromosome 9 Contains a pseudogene similar to part of FSHD region gene 1 (FSG1) (FRG1), a pseudogene similar to part of phosphoglucomutase 5 (PGRM) (PGM5) and four CpG islands, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 150142 caatgaatttgtcacaatgatggagaaaggaaa 150174
>gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, complete sequence Length = 176691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 aatctgtctgaagatgaaatt 73 ||||||||||||||||||||| Sbjct: 102600 aatctgtctgaagatgaaatt 102580
>gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, complete sequence Length = 113127 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 aatctgtctgaagatgaaatt 73 ||||||||||||||||||||| Sbjct: 17211 aatctgtctgaagatgaaatt 17191
>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete sequence Length = 230693 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 53040 caatgaatttgtcacaatgatggagaaaggaaa 53008
>gb|AF418563.3| Solanum tuberosum calcium-dependent protein kinase 2 mRNA, complete cds Length = 1702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 ttcgataaagatggcagtggttacattac 345 |||||||||||||||||||| | |||||| Sbjct: 1372 ttcgataaagatggcagtgggttcattac 1400
>emb|CR387925.5| Human DNA sequence from clone RP11-58A12 on chromosome 9, complete sequence Length = 172519 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 120933 caatgaatttgtcacaatgatggagaaaggaaa 120965
>gb|U20388.1|ATACDPK9 Arabidopsis thaliana calcium dependent protein kinase mRNA, complete cds Length = 1693 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 206 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 265 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1145 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1204 Query: 266 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 325 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1205 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1264 Query: 326 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 385 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1265 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1324 Query: 386 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 438 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1325 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1377
>ref|NM_059962.2| Caenorhabditis elegans C36B1.5 (C36B1.5) mRNA, complete cds Length = 1589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tgtctgaagatgaaattgcag 77 ||||||||||||||||||||| Sbjct: 349 tgtctgaagatgaaattgcag 369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cagtggttacattactcaaga 351 ||||||||||||||||||||| Sbjct: 14315196 cagtggttacattactcaaga 14315216
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 ttcgataaagatggcagtggttacattac 345 ||||| ||||||||||||||||| ||||| Sbjct: 28108900 ttcgacaaagatggcagtggttatattac 28108928
>emb|BX827943.1|CNS0A3UI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1800 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 212 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 271 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 1234 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 1293 Query: 272 aacaa 276 ||||| Sbjct: 1294 aacaa 1298
>emb|BX832558.1|CNS0A1KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 206 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 265 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1208 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1267 Query: 266 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 325 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1268 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1327 Query: 326 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 385 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1328 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1387 Query: 386 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 438 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1388 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1440
>emb|BX830884.1|CNS0A0OT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1720 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 206 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 265 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1184 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1243 Query: 266 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 325 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1244 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1303 Query: 326 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 385 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1304 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1363 Query: 386 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 438 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1364 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1416
>gb|AC150905.2| Pan troglodytes BAC clone RP43-100G12 from chromosome unknown, complete sequence Length = 46540 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 42547 caatgaatttgtcacaatgatggagaaaggaaa 42579
>gb|AY176041.1| Paralichthys olivaceus calmodulin mRNA, partial cds Length = 437 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 cttcgataaagatggcagtggttacatta 344 ||||||||| ||||||| ||||||||||| Sbjct: 25 cttcgataaggatggcaatggttacatta 53
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tggacactgacaatagtggcc 122 ||||||||||||||||||||| Sbjct: 37842 tggacactgacaatagtggcc 37862
>dbj|BS000143.1| Pan troglodytes chromosome 22 clone:PTF22-005L11, map 22, complete sequences Length = 35971 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 29538 caatgaatttgtcacaatgatggagaaaggaaa 29506
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 ttcgataaagatggcagtggttacattac 345 ||||| ||||||||||||||||| ||||| Sbjct: 98547 ttcgacaaagatggcagtggttatattac 98575
>emb|AL731809.17| Human DNA sequence from clone RP13-354N4 on chromosome 9, complete sequence Length = 202611 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 157432 caatgaatttgtcacaatgatggagaaaggaaa 157400
>emb|Z80215.1|CEC36B1 Caenorhabditis elegans Cosmid C36B1, complete sequence Length = 44996 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tgtctgaagatgaaattgcag 77 ||||||||||||||||||||| Sbjct: 21803 tgtctgaagatgaaattgcag 21783
>emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395L14. Contains (part of) up to six novel genes or pseudogenes, the gene for a novel forkhead protein similar to FOXD4 (forkhead box D4, FREAC5), the gene for a novel phosphoglucomutase like protein, a pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His) box (S.cerevisiae CHL1-like helicase), an RPL23A (60S ribosomal protein L23A) pseudogene, the RABL2A gene for RAB-like 2A, the gene for a novel protein similar to small nuclear ribonucleoprotein polypeptide A' (SNRPA1) and the 3' part of the gene for a novel protein similar to acrosin (ACR). Contains ESTs, STSs, GSSs and nine putative CpG islands, complete sequence Length = 176734 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 451 caatgaatttgtaacaatgatgcagaagggaaa 483 |||||||||||| ||||||||| |||| ||||| Sbjct: 44053 caatgaatttgtcacaatgatggagaaaggaaa 44021
>gb|DQ250026.1| Hordeum brevisubulatum calcium-dependent protein kinase (CDPK) mRNA, complete cds Length = 2094 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 gcaatgaataaactaaagaagatggccct 36 |||||||||||||| || ||||||||||| Sbjct: 1400 gcaatgaataaactgaaaaagatggccct 1428
>gb|AC107704.8| Mus musculus chromosome 7, clone RP24-121L4, complete sequence Length = 194458 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggttacattactcaagatga 354 |||||||||||||||||||| Sbjct: 47868 ggttacattactcaagatga 47849
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 303 cagcattctcatacttcgataaagatggcagtggtt 338 |||||||||||| ||||| |||||||| ||||||| Sbjct: 70300 cagcattctcatttttcgacaaagatggaagtggtt 70265
>gb|AY341376.1| Pinctada fucata calmodulin mRNA, complete cds Length = 739 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 ttcgataaagatggcagtggttacatta 344 |||||||||||||||| ||||| ||||| Sbjct: 346 ttcgataaagatggcaatggtttcatta 373
>gb|AY144497.1| Oryza sativa (japonica cultivar-group) OsCDPK protein mRNA, complete cds Length = 1907 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 303 cagcattctcatacttcgataaagatggcagtggtt 338 |||||||||||| ||||| |||||||| ||||||| Sbjct: 1312 cagcattctcatttttcgacaaagatggaagtggtt 1347
>emb|CR936462.9| Zebrafish DNA sequence from clone DKEY-259H22 in linkage group 5, complete sequence Length = 40246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 agtcatttgctatgctaatg 599 |||||||||||||||||||| Sbjct: 14414 agtcatttgctatgctaatg 14395
>emb|AL136363.4| Human DNA sequence from clone RP6-43L17 on chromosome Xq21.1-21.33, complete sequence Length = 93296 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 caatgaataaactaaagaagatgg 32 ||||||||||||||||||| |||| Sbjct: 47076 caatgaataaactaaagaaaatgg 47053
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gaatctgtctgaagatgaaattgc 75 |||||||||||| ||||||||||| Sbjct: 2441070 gaatctgtctgatgatgaaattgc 2441047
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 40.1 bits (20), Expect = 8.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 208 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 267 ||||||||| || ||||||||| |||| || || || || ||||| || || ||||| || Sbjct: 69326 ggcggatatagacaacagtgggacaatagactacggtgaattcctagcagcgacattaca 69385 Query: 268 tctgaacaaggttgagagagaaga 291 | | |||||| | ||||||||||| Sbjct: 69386 tataaacaagatggagagagaaga 69409
>emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome 4, BAC clone T25P22 (ESSA project) Length = 97876 Score = 40.1 bits (20), Expect = 8.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 208 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 267 ||||||||| || ||||||||| |||| || || || || ||||| || || ||||| || Sbjct: 22168 ggcggatatagacaacagtgggacaatagactacggtgaattcctagcagcgacattaca 22227 Query: 268 tctgaacaaggttgagagagaaga 291 | | |||||| | ||||||||||| Sbjct: 22228 tataaacaagatggagagagaaga 22251
>emb|CR854914.10| Zebrafish DNA sequence from clone DKEY-256M11 in linkage group 5, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 taaaaactggcttgcagaga 160 |||||||||||||||||||| Sbjct: 75989 taaaaactggcttgcagaga 75970
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence Length = 163126 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 577 cccagtcatttgctatgctaatga 600 |||||||||||||| ||||||||| Sbjct: 107523 cccagtcatttgctttgctaatga 107546
>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence Length = 169989 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 572 tgtgccccagtcatttgctatgct 595 ||||||||||||| |||||||||| Sbjct: 112983 tgtgccccagtcacttgctatgct 113006
>gb|AC025460.7| Homo sapiens chromosome 5 clone CTD-2235E24, complete sequence Length = 214636 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aaagaagatggcccttagag 41 |||||||||||||||||||| Sbjct: 100387 aaagaagatggcccttagag 100368
>gb|AC022880.10| Homo sapiens chromosome , clone RP11-436P7, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 agagagaagataatctgtttgcag 305 |||||||| ||||||||||||||| Sbjct: 12795 agagagaaaataatctgtttgcag 12772
>gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, complete sequence Length = 166236 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 agagagaagataatctgtttgcag 305 |||||||| ||||||||||||||| Sbjct: 1712 agagagaaaataatctgtttgcag 1735
>gb|AC090568.5| Homo sapiens chromosome 8, clone RP11-69I13, complete sequence Length = 166398 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 577 cccagtcatttgctatgctaatga 600 |||||||||||||| ||||||||| Sbjct: 164021 cccagtcatttgctttgctaatga 163998
>gb|AC091832.3| Homo sapiens chromosome 5 clone CTD-2029E14, complete sequence Length = 187969 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aaagaagatggcccttagag 41 |||||||||||||||||||| Sbjct: 137431 aaagaagatggcccttagag 137412
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 aagatgaactgcaaaaagca 367 |||||||||||||||||||| Sbjct: 2134457 aagatgaactgcaaaaagca 2134438
>gb|U20626.1|ATU20626 Arabidopsis thaliana calcium-dependent protein kinase (CDPK9) gene, complete cds Length = 4420 Score = 40.1 bits (20), Expect = 8.3 Identities = 89/112 (79%) Strand = Plus / Plus Query: 231 caattgattatggggagttccttgcggcaacattgcatctgaacaaggttgagagagaag 290 ||||||| ||||| |||||| | || |||||| | || |||||||| | |||||||| | Sbjct: 2777 caattgactatggagagttcttagctgcaacaatccacttgaacaagctggagagagagg 2836 Query: 291 ataatctgtttgcagcattctcatacttcgataaagatggcagtggttacat 342 | ||||| | || |||||||| | ||| ||||| |||| ||||||||||| Sbjct: 2837 agaatctagtagctgcattctctttctttgataaggatgcaagtggttacat 2888
>gb|AC148965.3| Medicago truncatula chromosome 7 BAC clone mth2-10f21, complete sequence Length = 97477 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gaacaaggttgagagagaag 290 |||||||||||||||||||| Sbjct: 50621 gaacaaggttgagagagaag 50602
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 303 cagcattctcatacttcgataaagatggcagtggtt 338 |||||||||||| ||||| |||||||| ||||||| Sbjct: 3476345 cagcattctcatttttcgacaaagatggaagtggtt 3476310
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ataggagatgcacatcttga 402 |||||||||||||||||||| Sbjct: 14369 ataggagatgcacatcttga 14350
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence Length = 175075 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gggaaaaagggacaagggca 513 |||||||||||||||||||| Sbjct: 81670 gggaaaaagggacaagggca 81651
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 40.1 bits (20), Expect = 8.3 Identities = 89/112 (79%) Strand = Plus / Minus Query: 231 caattgattatggggagttccttgcggcaacattgcatctgaacaaggttgagagagaag 290 ||||||| ||||| |||||| | || |||||| | || |||||||| | |||||||| | Sbjct: 29863 caattgactatggagagttcttagctgcaacaatccacttgaacaagctggagagagagg 29804 Query: 291 ataatctgtttgcagcattctcatacttcgataaagatggcagtggttacat 342 | ||||| | || |||||||| | ||| ||||| |||| ||||||||||| Sbjct: 29803 agaatctagtagctgcattctctttctttgataaggatgcaagtggttacat 29752
>dbj|AK102308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B04, full insert sequence Length = 2524 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 303 cagcattctcatacttcgataaagatggcagtggtt 338 |||||||||||| ||||| |||||||| ||||||| Sbjct: 1941 cagcattctcatttttcgacaaagatggaagtggtt 1976
>emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in linkage group 4, complete sequence Length = 195795 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tgtttgcagcattctcatac 316 |||||||||||||||||||| Sbjct: 109004 tgtttgcagcattctcatac 108985
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 303 cagcattctcatacttcgataaagatggcagtggtt 338 |||||||||||| ||||| |||||||| ||||||| Sbjct: 3485049 cagcattctcatttttcgacaaagatggaagtggtt 3485014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,635,471 Number of Sequences: 3902068 Number of extensions: 5635471 Number of successful extensions: 103708 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103102 Number of HSP's gapped (non-prelim): 604 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
