>ZN580_MOUSE (Q9DB38) Zinc finger protein 580|
          Length = 172

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 68  IQCPENPRFPPQGSSTEGESGPK 136
           +Q  E PR PPQ  +T GE GP+
Sbjct: 67  VQLEEEPRGPPQREATPGEPGPR 89

>GP176_MOUSE (Q80WT4) Probable G-protein coupled receptor 176 (G-protein coupled|
           receptor AGR9)
          Length = 515

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17  DEAEARM--SA*VTKTLVRIQCPENPRFPPQGSSTEGESGPKIRPKGVVDGQQVNIPVLP 190
           +E+EA+   SA      V   CPE  + PPQ         P + P G VD +    PV P
Sbjct: 387 EESEAKYLGSADFQAKEVLTSCPEGEQEPPQ-------LAPSVPPPGTVDSEPRVSPVAP 439

Query: 191 L 193
           +
Sbjct: 440 M 440

>VL2_HPV58 (P26538) Minor capsid protein L2|
          Length = 472

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 255 VSLNL*PSFG*PSLLRPSVPTRGSTGILTCCPSTT 151
           VS +L PSF  PS+LRP  P   S  ++   P+ +
Sbjct: 155 VSTHLNPSFTEPSVLRPPAPAEASGHLIFSSPTVS 189

>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC|
           3.2.1.4)
          Length = 484

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -3

Query: 222 PSLLRPSVPTRGSTGILTCCPSTTPFGLILGPDSPSVDEPC 100
           P L    V  R +T  L  C   TP  L +G   P+VD  C
Sbjct: 105 PELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKC 145

>ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC protein)|
          Length = 172

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 68  IQCPENPRFPPQGSSTEGESGPK 136
           +Q  E PR PPQ  +  GE GP+
Sbjct: 67  VQLEEEPRGPPQREAPPGEPGPR 89

>THIE_STRAW (Q82AF9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 215

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +1

Query: 61  GENPMPRKPKVSSARFVHGG*VRA*DQAERRSRWTTGQYSCTTPCWYGGTEEARLA 228
           G+ P+P    +  A  + G    A  +AE  +      Y CT PCW   T+  R A
Sbjct: 94  GDLPVPAARAILGADVLIGRSTHAEAEAEAAAVQEGVDYFCTGPCWPTPTKPGRHA 149

>VL2_HPV32 (P36757) Minor capsid protein L2|
          Length = 476

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 237 PSFG*PSLLRPSVPTRGSTGILTCCPSTTP 148
           P +  P  LRPS+P  G+  +LT  P+  P
Sbjct: 164 PVYSDPFTLRPSLPVEGNGRLLTSHPTIAP 193

>METE_BACSU (P80877) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase) (Superoxide-inducible protein 9)
           (SOI9)
          Length = 761

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = +1

Query: 31  ENVGLSNENIGENPMPRKPKVSSARFVHGG*VRA*DQAERRSRWTTGQY----SCTTPCW 198
           E + L NE++G   +P  P  +   F     VR   Q  R++ W+  QY    +  T  W
Sbjct: 415 ERLALQNESLG---LPLLPTTTIGSFPQSAEVRRARQKWRKAEWSDEQYQNFINAETKRW 471

Query: 199 YGGTEEARL 225
               EE  L
Sbjct: 472 IDIQEELEL 480

>PYRD_FUSNN (Q8RG85) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 304

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +2

Query: 56  TLVRIQCPENPRFPPQGSSTEGESGPKIRPKGV----VDGQQVNIPVLPLVG 199
           TLV I        P   ++T G SGP IRP  +       Q VNIP++ + G
Sbjct: 194 TLVGIVLDRKTGKPIIANTTGGLSGPAIRPVAIRMVYQVAQAVNIPIIGMGG 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,614,325
Number of Sequences: 219361
Number of extensions: 955166
Number of successful extensions: 2655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)