>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                           
Query: 13      cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
               ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 9463799 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 9463740

                                                                           
Query: 72      atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
                |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 9463739 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 9463680

                         
Query: 132     ccatccgcgt 141
               ||||||||||
Sbjct: 9463679 ccatccgcgt 9463670

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                          
Query: 13     cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
              ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 161199 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 161140

                                                                          
Query: 72     atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
               |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 161139 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 161080

                        
Query: 132    ccatccgcgt 141
              ||||||||||
Sbjct: 161079 ccatccgcgt 161070

>gb|AY224460.1| Oryza sativa (japonica cultivar-group) isolate 23496
           H+-transporting ATP synthase chain 9-like protein mRNA,
           complete cds
          Length = 636

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
           ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 505 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 564

                                                                       
Query: 72  atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
            |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 565 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 624

                     
Query: 132 ccatccgcgt 141
           ||||||||||
Sbjct: 625 ccatccgcgt 634

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                           
Query: 13      cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
               ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 9461920 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 9461861

                                                                           
Query: 72      atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
                |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 9461860 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 9461801

                         
Query: 132     ccatccgcgt 141
               ||||||||||
Sbjct: 9461800 ccatccgcgt 9461791

>dbj|AK105013.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B11, full
            insert sequence
          Length = 1262

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
            ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 972  cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 1031

                                                                        
Query: 72   atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
             |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 1032 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 1091

                      
Query: 132  ccatccgcgt 141
            ||||||||||
Sbjct: 1092 ccatccgcgt 1101

>dbj|AK105925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A08, full
           insert sequence
          Length = 969

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
           ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 681 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 740

                                                                       
Query: 72  atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
            |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 741 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 800

                     
Query: 132 ccatccgcgt 141
           ||||||||||
Sbjct: 801 ccatccgcgt 810

>dbj|AK066019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M17, full
           insert sequence
          Length = 983

 Score =  149 bits (75), Expect = 6e-33
 Identities = 117/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  cgcgtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggcc 71
           ||||| | |||||||||||| ||||||||||| | ||||| || ||||||||||||||||
Sbjct: 665 cgcgtcgaggccgagctcgtggaggcgctcgccaacctcgaggcgcagaaggaggaggcc 724

                                                                       
Query: 72  atcaaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctc 131
            |||||||||| ||||| |||||||  || ||||||||||||||||||||||||||||||
Sbjct: 725 gtcaaggcgctcgacgcccagatcgcctccctcagcgacgagatcgtcaagaaggtgctc 784

                     
Query: 132 ccatccgcgt 141
           ||||||||||
Sbjct: 785 ccatccgcgt 794

>gb|AY108614.1| Zea mays PCO080036 mRNA sequence
          Length = 972

 Score =  123 bits (62), Expect = 4e-25
 Identities = 113/129 (87%), Gaps = 1/129 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  gtggnggccgagctcgtcgaggcgctcgcgagcctcgggg-gcagaaggaggaggccatc 74
           |||| |||||||||||| ||||||||||| | ||||| || |||||||||||||||  | 
Sbjct: 573 gtggaggccgagctcgtagaggcgctcgccaacctcgaggcgcagaaggaggaggctgtt 632

                                                                       
Query: 75  aaggcgctggacgcgcagatcgtgtcactcagcgacgagatcgtcaagaaggtgctccca 134
           |||||||| ||||| |||||||  || ||||| || ||||||||||||||||||||||||
Sbjct: 633 aaggcgctcgacgcccagatcgcctcgctcagtgatgagatcgtcaagaaggtgctccca 692

                    
Query: 135 tccgcgtga 143
           |||||||||
Sbjct: 693 tccgcgtga 701

>gb|AF424650.1| Phytophthora infestans clone MY-06-G-03 serine/threonine protein
          phosphatase mRNA, complete cds
          Length = 1336

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 75 aaggcgctggacgcgcagatcg 96
          ||||||||||||||||||||||
Sbjct: 45 aaggcgctggacgcgcagatcg 66

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    gccgagctcgtcgaggcgctcgcg 45
             ||||||| ||||||||||||||||
Sbjct: 29750 gccgagcgcgtcgaggcgctcgcg 29773

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      gccgagctcgtcgaggcgct 41
               ||||||||||||||||||||
Sbjct: 3662957 gccgagctcgtcgaggcgct 3662976

>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome
          Length = 57416

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   cgcagcagccggcgcaatcc 186
             ||||||||||||||||||||
Sbjct: 35373 cgcagcagccggcgcaatcc 35354

>ref|XM_323628.1| Neurospora crassa OR74A hypothetical protein ( (AL451109) related to
            phosphoethanolamine cytidylyltransferase [Neurospora
            crassa OR74A] ) (NCU04289.1) partial mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   ggcagaaggaggaggccatc 74
            ||||||||||||||||||||
Sbjct: 1322 ggcagaaggaggaggccatc 1341

>ref|XM_955986.1| Neurospora crassa OR74A hypothetical protein ( (AL451109) related to
            phosphoethanolamine cytidylyltransferase [Neurospora
            crassa OR74A] ) (NCU04289.1) partial mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   ggcagaaggaggaggccatc 74
            ||||||||||||||||||||
Sbjct: 1322 ggcagaaggaggaggccatc 1341

>ref|XM_657034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4522.2), mRNA
          Length = 351

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 agatcgtcaagaaggtgctc 131
           ||||||||||||||||||||
Sbjct: 299 agatcgtcaagaaggtgctc 318

>emb|AL451109.1|NCB11A5 Neurospora crassa DNA linkage group V BAC clone B11A5
          Length = 74109

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggcagaaggaggaggccatc 74
             ||||||||||||||||||||
Sbjct: 33985 ggcagaaggaggaggccatc 34004

>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 168058

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     agaaggaggaggccatcaag 77
              ||||||||||||||||||||
Sbjct: 113425 agaaggaggaggccatcaag 113406

>gb|AE011878.1| Xanthomonas axonopodis pv. citri str. 306,  section 256 of 469 of the
            complete genome
          Length = 10402

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 68   ggccatcaaggcgctggacgcgca 91
            ||||||| ||||||||||||||||
Sbjct: 1929 ggccatccaggcgctggacgcgca 1906

>ref|NM_079478.3| Drosophila melanogaster crocodile CG5069-RA (croc), mRNA
          Length = 2522

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  agaaggaggaggccatcaag 77
           ||||||||||||||||||||
Sbjct: 883 agaaggaggaggccatcaag 902

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     cgctggacgcgcagatcgtg 98
              ||||||||||||||||||||
Sbjct: 251178 cgctggacgcgcagatcgtg 251197

>gb|S80254.1| Drosophila melanogaster crocodile (croc/FD1) gene, complete cds
          Length = 2520

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  agaaggaggaggccatcaag 77
           ||||||||||||||||||||
Sbjct: 881 agaaggaggaggccatcaag 900

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 27      gctcgtcgaggcgctcgcgagcct 50
               ||||| ||||||||||||||||||
Sbjct: 1329334 gctcgccgaggcgctcgcgagcct 1329357

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 232      gcccactgggctgcctcccc 251
                ||||||||||||||||||||
Sbjct: 42248483 gcccactgggctgcctcccc 42248464

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     tcaaggcgctggacgcgcagatcg 96
              ||||||||||||||| ||||||||
Sbjct: 385281 tcaaggcgctggacgtgcagatcg 385304

>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0401G10
          Length = 160704

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   gcccactgggctgcctcccc 251
             ||||||||||||||||||||
Sbjct: 20440 gcccactgggctgcctcccc 20421

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 21      ggccgagctcgtcgaggcgctcgc 44
               ||||||||| ||||||||||||||
Sbjct: 4845865 ggccgagctggtcgaggcgctcgc 4845888



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 27      gctcgtcgaggcgctcgcga 46
               ||||||||||||||||||||
Sbjct: 1115005 gctcgtcgaggcgctcgcga 1115024

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     gcagcgcgcagcagccggcg 180
               ||||||||||||||||||||
Sbjct: 3957631 gcagcgcgcagcagccggcg 3957650

>dbj|AK110432.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-B10, full
            insert sequence
          Length = 2794

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  gcagcgcgcagcagccggcg 180
            ||||||||||||||||||||
Sbjct: 2355 gcagcgcgcagcagccggcg 2374

>gb|M96440.1|DROFD1BPA Drosophila melanogaster fork head domain DNA binding protein (FD1)
           gene, partial cds
          Length = 384

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  agaaggaggaggccatcaag 77
           ||||||||||||||||||||
Sbjct: 359 agaaggaggaggccatcaag 378

>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete
              sequence
          Length = 314904

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     agaaggaggaggccatcaag 77
              ||||||||||||||||||||
Sbjct: 210027 agaaggaggaggccatcaag 210008

>dbj|D16176.1|MXAPTATP Myxococcus xanthus gene for proton translocating ATPase, complete cds
          Length = 2492

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   catcaaggcgctggacgcgc 90
            ||||||||||||||||||||
Sbjct: 1083 catcaaggcgctggacgcgc 1102

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 23      ccgagctcgtcgaggcgctcgcga 46
               |||||||||||||| |||||||||
Sbjct: 2907049 ccgagctcgtcgagccgctcgcga 2907026

>gb|BT001793.1| Drosophila melanogaster RH24787 full insert cDNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  agaaggaggaggccatcaag 77
           ||||||||||||||||||||
Sbjct: 807 agaaggaggaggccatcaag 826

>gb|M26323.1|RCANIFQ Rhodobacter capsulatus nitogen fixation protein (nifQ) gene,
           complete cds
          Length = 1600

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 gacgagatcgtcaagaaggt 127
           ||||||||||||||||||||
Sbjct: 431 gacgagatcgtcaagaaggt 450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,275,999
Number of Sequences: 3902068
Number of extensions: 2275999
Number of successful extensions: 51529
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50737
Number of HSP's gapped (non-prelim): 784
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)