>RPC1_YEAST (P04051) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6) (C160)
          Length = 1460

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 305 LSASSGPLGFATPCCPDFPRAQSAESK*ARSWSFXMSGGFLGISPPNF 162
           +S +  P GF     P FP+     SK  +S  F  +  F G+SPP F
Sbjct: 818 ISGNRVPDGFQDRSLPHFPK----NSKTPQSKGFVRNSFFSGLSPPEF 861

>Y1627_AQUAE (O67549) Hypothetical protein aq_1627|
          Length = 126

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 128 GMALSPLWSIGSEF--PTLSCPAALASFIPDMVSHGYGDAGGA 6
           G+AL  LW +  E   PTLS P    +F+   +S G+ +AGG+
Sbjct: 29  GLALCTLWILDKEIEEPTLSIPE--TNFVTLALSVGFMNAGGS 69

>SOX21_CHICK (Q9W7R5) Transcription factor SOX-21|
          Length = 280

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 110 LWSIGSEFPTLSCPAALASFIPDMVSHGYGDAGGAG 3
           L  +GS+   +S  ++  S +P   S GY  AGGAG
Sbjct: 172 LLDLGSKMAEISSSSSAGSALPYASSLGYPGAGGAG 207

>RS7_LEIXX (Q6ACY8) 30S ribosomal protein S7|
          Length = 156

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 214 ERAYFDSADWALGKSGQQGVAKPKGPLEALRPKLQ 318
           ER  +D+ +    KSG   VA  K  L+ +RP L+
Sbjct: 40  ERIVYDALEGVSSKSGNDAVATLKKALDNIRPTLE 74

>MYCS_MOUSE (Q9Z304) Protein S-myc|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 95  NLWTKVEIMPCPRLSNRNK*SKRSLE 172
           ++W K E++P PRLS  +  ++ SLE
Sbjct: 48  DIWKKFELLPTPRLSPDSALAEHSLE 73

>REC8L_MOUSE (Q8C5S7) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)|
          Length = 591

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 35  SPCRG*RTPMLLGMITLEILNLWTKVEIMPCPRLSNR 145
           SP    RTP L G +  E+L LWT    +P   L  R
Sbjct: 385 SPAELFRTPTLSGWLPPELLGLWTHCAQVPQRMLRQR 421

>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1046

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -2

Query: 322 WAATLAXVPRAVLWVLQHLAVQTFREPNQQ 233
           WA  L  VP +VLW+L+  AV    EPN Q
Sbjct: 861 WANILKRVPNSVLWLLRFPAV---GEPNIQ 887


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.126    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,970,933
Number of Sequences: 219361
Number of extensions: 801527
Number of successful extensions: 1389
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)