Clone Information

BLAST Search Result

Clone Name	baal13e13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SYP61_ARATH (Q946Y7) Syntaxin-61 (AtSYP61) (Osmotic stress-sensi...	143	2e-34
2	STX6_PONPY (Q5R6Q2) Syntaxin-6	66	4e-11
3	STX6_HUMAN (O43752) Syntaxin-6	66	4e-11
4	STX6_RAT (Q63635) Syntaxin-6	66	5e-11
5	STX6_MOUSE (Q9JKK1) Syntaxin-6	66	5e-11
6	STX6_CHICK (Q5ZL19) Syntaxin-6	65	1e-10
7	STX10_HUMAN (O60499) Syntaxin-10 (Syn10)	55	9e-08
8	FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP)	33	0.29
9	FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP)	33	0.29
10	FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhanc...	33	0.49
11	SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dep...	33	0.49
12	L_RABVP (P11213) Large structural protein (L protein) (Transcrip...	32	0.64
13	FLIP1_HUMAN (Q7Z7B0) Filamin-A-interacting protein 1 (FILIP)	32	0.64
14	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	32	0.64
15	BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (...	32	0.64
16	GD_DROME (O62589) Serine protease gd precursor (EC 3.4.21.-) (Pr...	32	0.83
17	PK3CG_PIG (O02697) Phosphatidylinositol-4,5-bisphosphate 3-kinas...	32	1.1
18	PK3CG_MOUSE (Q9JHG7) Phosphatidylinositol-4,5-bisphosphate 3-kin...	32	1.1
19	VP8_RDVO (P17379) Outer capsid protein P8 (Structural protein P8...	32	1.1
20	DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)	32	1.1
21	EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Co...	31	1.9
22	K1C1_CARAU (Q90303) Keratin, type I cytoskeletal 50 kDa (GK50)	31	1.9
23	RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)	31	1.9
24	NCOA3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48...	31	1.9
25	ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (E...	31	1.9
26	PDR1_YEAST (P12383) Transcription factor PDR1 (Pleiotropic drug ...	30	2.4
27	PK3CG_HUMAN (P48736) Phosphatidylinositol-4,5-bisphosphate 3-kin...	30	2.4
28	L_RABVS (P16289) Large structural protein (L protein) (Transcrip...	30	2.4
29	BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 ...	30	2.4
30	MYLK2_RABIT (P07313) Myosin light chain kinase 2, skeletal/cardi...	30	3.2
31	YP73_GVCL (P41730) Hypothetical protein in P7.3 3'region	30	3.2
32	WEE1_SCHPO (P07527) Mitosis inhibitor protein kinase wee1 (EC 2....	30	3.2
33	ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)	30	3.2
34	CI150_HUMAN (Q8IV03) Protein C9orf150	30	3.2
35	PYRD_NEIMB (Q9K1D7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D...	30	4.1
36	TPM_MIMNO (Q9GZ69) Tropomyosin	30	4.1
37	PO14_NASVI (Q03272) Retrovirus-related Pol polyprotein from type...	30	4.1
38	BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)	29	5.4
39	BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO d...	29	5.4
40	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	29	5.4
41	IF2_PROAC (Q6A7M5) Translation initiation factor IF-2	29	5.4
42	PYRD_NEIMA (Q9JX66) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D...	29	7.1
43	H1_MAIZE (P23444) Histone H1	29	7.1
44	TGAS_STRMB (P81453) Protein-glutamine gamma-glutamyltransferase ...	29	7.1
45	SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor	29	7.1
46	R1A_SOLDE (Q8W1E0) Late blight resistance protein R1-A (Protein R1)	29	7.1
47	CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor	29	7.1
48	DMBT1_HUMAN (Q9UGM3) Deleted in malignant brain tumors 1 protein...	28	9.2
49	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	28	9.2
50	M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kina...	28	9.2
51	SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precurs...	28	9.2
52	RRBP1_HUMAN (Q9P2E9) Ribosome-binding protein 1 (Ribosome recept...	28	9.2
53	NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) ...	28	9.2
54	RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial p...	28	9.2
55	IQGA3_HUMAN (Q86VI3) Ras GTPase-activating-like protein IQGAP3	28	9.2

>SYP61_ARATH (Q946Y7) Syntaxin-61 (AtSYP61) (Osmotic stress-sensitive mutant 1)|
          Length = 245

 Score =  143 bits (361), Expect = 2e-34
 Identities = 64/106 (60%), Positives = 84/106 (79%)
 Frame = +2

Query: 155 MSSPQDPFYIVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDEL 334
           MSS QDPFYIV+EEIQ SI KLQ+TFH+WE++S + G+  H+ KEL+ +C SIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60

Query: 335 EKTISVASRDPAYYGLDEVELSRRRNWTGSARNQIGTVRRAVEKGK 472
           EK I+VA++DP++YG+DE EL +RR WT +AR Q+  V+  V  GK
Sbjct: 61  EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGK 106

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>STX6_PONPY (Q5R6Q2) Syntaxin-6|
          Length = 255

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRWEQV----SSNTGEYVH-LTKELLTSCESIEWQV 325
           S +DPF++V+ E+Q ++   Q  F RW ++    S+ T E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSARNQI 439
           ++L++TIS+   +P  + LD  ELS R+ +  S R  +
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVV 99

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>STX6_HUMAN (O43752) Syntaxin-6|
          Length = 255

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRWEQV----SSNTGEYVH-LTKELLTSCESIEWQV 325
           S +DPF++V+ E+Q ++   Q  F RW ++    S+ T E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSARNQI 439
           ++L++TIS+   +P  + LD  ELS R+ +  S R  +
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVV 99

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>STX6_RAT (Q63635) Syntaxin-6|
          Length = 255

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRWEQV----SSNTGEYVH-LTKELLTSCESIEWQV 325
           S +DPF++V+ E+Q ++   Q  F RW ++    S+ T E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSAR 430
           ++L++TIS+   +P  + LD  ELS R+ +  S R
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTR 96

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>STX6_MOUSE (Q9JKK1) Syntaxin-6|
          Length = 255

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRWEQV----SSNTGEYVH-LTKELLTSCESIEWQV 325
           S +DPF++V+ E+Q ++   Q  F RW ++    S+ T E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSAR 430
           ++L++TIS+   +P  + LD  ELS R+ +  S R
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTR 96

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>STX6_CHICK (Q5ZL19) Syntaxin-6|
          Length = 254

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRWEQVSSNTG-----EYVHLTKELLTSCESIEWQV 325
           S +DPF++V+ E+Q ++   Q  F RW ++  +       E    T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSIATREEIDWTTNELRNNLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSARNQI 439
           ++L++TIS+   +P  + LD  EL  R+++  S R  +
Sbjct: 62  EDLDETISIVEANPRKFNLDATELGIRKSFITSTRQVV 99

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>STX10_HUMAN (O60499) Syntaxin-10 (Syn10)|
          Length = 249

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
 Frame = +2

Query: 161 SPQDPFYIVREEIQGSIGKLQATFHRW-----EQVSSNTGEYVHLTKELLTSCESIEWQV 325
           S +DPF++VR E+Q ++   +  + RW     E  +    E    T EL     SIEW +
Sbjct: 2   SLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDL 61

Query: 326 DELEKTISVASRDPAYYGLDEVELSRRRNWTGSARNQI 439
           ++LE+TI +   +P  + L   +L  R+ +    R  +
Sbjct: 62  EDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAV 99

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>FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP)|
          Length = 1211

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 21/91 (23%), Positives = 42/91 (46%)
 Frame = +2

Query: 194 EIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDELEKTISVASRDPAY 373
           E++G   ++  T  +  ++     E  H +KEL    E ++ ++ ELEK     SR  + 
Sbjct: 389 EMEGKDEEITKTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSE 448

Query: 374 YGLDEVELSRRRNWTGSARNQIGTVRRAVEK 466
                + L + +N T    N++  V+  V++
Sbjct: 449 CTQLHLNLEKEKNLTKDLLNELEVVKSRVKE 479

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>FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP)|
          Length = 1212

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 21/91 (23%), Positives = 42/91 (46%)
 Frame = +2

Query: 194 EIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDELEKTISVASRDPAY 373
           E++G   ++  T  +  ++     E  H +KEL    E ++ ++ ELEK     SR  + 
Sbjct: 388 EMEGKDEEITKTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSE 447

Query: 374 YGLDEVELSRRRNWTGSARNQIGTVRRAVEK 466
                + L + +N T    N++  V+  V++
Sbjct: 448 CTQLHLNLEKEKNLTKDLLNELEVVKSRVKE 478

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>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding|
           factor 1) (Cellular transcription factor ILF-1)
          Length = 655

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
 Frame = +2

Query: 26  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPAD--------------PASGMSS 163
           IS  P P  ++ +    PSSP   G S G  +GR+ P+D               ASG  S
Sbjct: 189 ISPLPSPTGTISAANSCPSSPRGAGSS-GYKVGRVMPSDLNLMADNSQPENEKEASGGDS 247

Query: 164 PQD---PFYIVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTK 286
           P+D   P Y   + I  +I     T    +Q++ N G Y H+TK
Sbjct: 248 PKDDSKPPYSYAQLIVQAI-----TMAPDKQLTLN-GIYTHITK 285

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>SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 5 (EC 3.6.1.-)
           (Sucrose nonfermenting protein 2 homolog) (mSnf2h)
          Length = 1051

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 38  PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEI--QGSI 211
           P P P  ES P  PS+ G  G S G   G    A PA+  ++   P     EE+   GS 
Sbjct: 7   PPPPPPPESAPSKPSAAGAGGSSSGNKGGPEGGAAPAAPCAAGSGPADTEMEEVFDHGSP 66

Query: 212 GK 217
           GK
Sbjct: 67  GK 68

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>L_RABVP (P11213) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2142

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
 Frame = +2

Query: 29   SSAPRPNPSLESTPR--VPSSPGKDGRSVGR-SIGRIPPADPASGMSSPQDPFYIVREEI 199
            ++ P P+  L   P+  +  + G  G    R S+  +P  D +   + P      ++  +
Sbjct: 1113 TTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFCTGP------LKGYL 1166

Query: 200  QGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQV---DELEKTI--SVASRD 364
              S       FH WE+V++     VH+ K  L+  ESI W +     L +T+  ++ S  
Sbjct: 1167 GSSTSMSTQLFHAWEKVTN-----VHVVKRALSLKESINWFITRDSNLAQTLIRNIVSLT 1221

Query: 365  PAYYGLDEVELSRRRNWTGSARNQIGTVR 451
               + L+E  + +R   TGSA ++  + R
Sbjct: 1222 GPDFPLEEAPVFKR---TGSALHRFKSAR 1247

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>FLIP1_HUMAN (Q7Z7B0) Filamin-A-interacting protein 1 (FILIP)|
          Length = 1213

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/91 (21%), Positives = 42/91 (46%)
 Frame = +2

Query: 194 EIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDELEKTISVASRDPAY 373
           E++G   ++  T  +  ++     E  H +KEL    E ++ ++ ELEK     S+  + 
Sbjct: 389 EMEGKDEEITKTESQCRELRKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSKSKSE 448

Query: 374 YGLDEVELSRRRNWTGSARNQIGTVRRAVEK 466
                + L + +N T    N++  V+  V++
Sbjct: 449 CTQLHLNLEKEKNLTKDLLNELEVVKSRVKE 479

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
 Frame = +2

Query: 8   NRRTTWISSAPRPNPSL-------ESTPRVPSSPGKDGRSVGRSIGRIPPADPASG--MS 160
           N+  +W    P+  PS+        STPR+P  PG     VG + GR P   PA    + 
Sbjct: 248 NKNGSW---GPKTKPSVIHSRSPPGSTPRLPERPGPSNPPVGPAPGRHPQDTPAQSGPLV 304

Query: 161 SPQDPFYIVREEIQGSIG-KLQATFH 235
           +  D    VR    GS+  +++  FH
Sbjct: 305 AGDDMKKKVRMNEDGSLSVEMKVRFH 330

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>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
 Frame = +2

Query: 26  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSS-----PQDPFYIVR 190
           +SSAP P PS    P    SP K+  +  ++     PA+PA+  S      P+ P  +  
Sbjct: 371 VSSAPIPCPSPSPAPSAVPSPPKNVAAEQKAAPSPAPAEPAAPKSGEAETPPKHPGVLKV 430

Query: 191 EEIQGSIGKLQATFHRWEQVSSNTGEYV----HLTKELL 295
           E I   +  L+     +E   ++  +Y+    +LTKELL
Sbjct: 431 EAILEKVQGLEQAVDSFEGKKTDK-KYLMIEEYLTKELL 468

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>GD_DROME (O62589) Serine protease gd precursor (EC 3.4.21.-) (Protein|
           gastrulation defective)
          Length = 528

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 82  VAGKGRTVGWSVDRSNPTRGSGLRHELP 165
           V  +G  +GWS DR+N TR   L  ELP
Sbjct: 379 VGERGIVIGWSFDRTNRTRDQKLSSELP 406

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>PK3CG_PIG (O02697) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic|
            subunit gamma isoform (EC 2.7.1.153) (PI3-kinase p110
            subunit gamma) (PtdIns-3-kinase subunit p110) (PI3K)
            (PI3Kgamma) (p120-PI3K)
          Length = 1102

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 293  LTSCESIEWQVDELEKTISVASRDPAYYGLDEVELSRRRNWT 418
            LTS E IE+  D L  T+  +  D   Y LD++E+ R + WT
Sbjct: 1042 LTSKEDIEYIRDAL--TVGKSEEDAKKYFLDQIEVCRDKGWT 1081

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>PK3CG_MOUSE (Q9JHG7) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic|
            subunit gamma isoform (EC 2.7.1.153) (PI3-kinase p110
            subunit gamma) (PtdIns-3-kinase subunit p110) (PI3K)
            (PI3Kgamma) (p120-PI3K)
          Length = 1102

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 293  LTSCESIEWQVDELEKTISVASRDPAYYGLDEVELSRRRNWT 418
            LTS E IE+  D L  T+  +  D   Y LD++E+ R + WT
Sbjct: 1042 LTSKEDIEYIRDAL--TVGKSEEDAKKYFLDQIEVCRDKGWT 1081

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>VP8_RDVO (P17379) Outer capsid protein P8 (Structural protein P8) [Contains:|
           Outer capsid protein P8'; Small peptide 1 (Sp1)]
          Length = 420

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
 Frame = +2

Query: 77  PSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYI---------VREEIQGSIGKLQAT 229
           P  P K  RSV    G IP     +   + Q PF++         +R       G  Q  
Sbjct: 150 PIEPCKLFRSVAGQTGNIPMMGILATPPAQQQPFFVAERRRILFGIRSNAAIPAGAYQFV 209

Query: 230 FHRWEQVSSNTGEYVHLT 283
              W  V S TG YV+ T
Sbjct: 210 VPAWASVLSVTGAYVYFT 227

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>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)|
          Length = 3036

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = +2

Query: 62   STPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGKLQATFHRW 241
            ST +   + GKDG      I  IPP    + +++ QD  Y + EE      K+  ++   
Sbjct: 1404 STAKETVTVGKDGTRDYTEIDSIPPLPLYALLAADQDTSYRISEEST----KIPQSYED- 1458

Query: 242  EQVSSNTGEYVHLTKELLTSCESIEWQVDELE---KTISVASRDPAYYGLDEVEL 397
            + VS    +Y  L +      + I+ + ++ E   K I+++   PAY+G +   +
Sbjct: 1459 QTVSQPEDQYSELFQIQDIPTDDIDLEPEKRENKSKVINLSQYGPAYFGQEHARV 1513

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>EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Contains:|
            Epidermal growth factor]
          Length = 1214

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 77   PSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQ 202
            P +P ++    GR +  I PAD  +GMSS   P+++V +E Q
Sbjct: 1066 PKNPYEES---GRDVSGIRPADGEAGMSSCPQPWFVVIKEHQ 1104

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>K1C1_CARAU (Q90303) Keratin, type I cytoskeletal 50 kDa (GK50)|
          Length = 467

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
 Frame = +2

Query: 185 VREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIE---WQVDELEKTISVA 355
           +RE+ +G   K Q     W Q  S T     LTKE+  + E+++    +V EL +T+   
Sbjct: 288 IREQYEGVSAKNQRELDAWFQTKSET-----LTKEVTANTETLQVSKTEVTELRRTLQ-- 340

Query: 356 SRDPAYYGLD---EVELSRRRNWTGS 424
                  GL+   + ELS++R+  G+
Sbjct: 341 -------GLEIELQSELSKKRSLEGT 359

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>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)|
          Length = 694

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
 Frame = +2

Query: 29  SSAPRPNPSLESTPRVPSSPGKDG--RSVGRSIGRIPPADPASGMSSPQDPFYIV--REE 196
           +S P P       P  P  PG  G  R      GR P   P     +P DP      REE
Sbjct: 275 ASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEV---APSDPGTTAPPREE 331

Query: 197 IQGSIGKLQATFHRWEQVSSNTGEY 271
             G +G   A   R +++S  +G Y
Sbjct: 332 RTGGVGGYPAVGAREDRMSHPSGPY 356

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>NCOA3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
            (Thyroid hormone receptor activator molecule 1) (TRAM-1)
            (ACTR) (Receptor-associated coactivator 3) (RAC-3)
            (Amplified in breast cancer-1 protein homolog) (AIB-1)
            (Steroid recepto
          Length = 1398

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 11   RRTTWISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPAD---PAS-GMSSPQDPF 178
            +R   + S P+P  +    P V +SP  DG   G ++ + PP     PA+ GM  P +P 
Sbjct: 1240 QRMAMMMSQPQPQ-AFSPPPNVTASPSMDGVLAGSAMPQAPPQQFPYPANYGMGQPPEPA 1298

Query: 179  Y 181
            +
Sbjct: 1299 F 1299

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>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)|
           (Itch) (Atrophin-1-interacting protein 4) (AIP4)
           (NFE2-associated polypeptide 1) (NAPP1)
          Length = 903

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = +2

Query: 29  SSAPRPNPSLESTPRVPSS----PGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREE 196
           S  PRP+     TPR P+S    P     S G S G +PP +  +  S       I+   
Sbjct: 251 SRPPRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLT 310

Query: 197 IQGSIG 214
           I G  G
Sbjct: 311 ISGGSG 316

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>PDR1_YEAST (P12383) Transcription factor PDR1 (Pleiotropic drug resistance|
           protein 1)
          Length = 1063

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +2

Query: 110 GRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKE 289
           GRS G    +D  +     ++ FY    E Q ++  LQ T         N  E  HL   
Sbjct: 136 GRSSGDNSGSDGKNDDDVNRNGFYEDDSESQATLTSLQTTL-------KNLKEMAHLGTH 188

Query: 290 LLTSCESIEWQVDELEK 340
           + ++ ESIE Q+ +L K
Sbjct: 189 VTSAIESIELQISDLLK 205

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>PK3CG_HUMAN (P48736) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic|
            subunit gamma isoform (EC 2.7.1.153) (PI3-kinase p110
            subunit gamma) (PtdIns-3-kinase subunit p110) (PI3K)
            (PI3Kgamma) (p120-PI3K)
          Length = 1102

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 293  LTSCESIEWQVDELEKTISVASRDPAYYGLDEVELSRRRNWT 418
            LTS E IE+  D L  T+     D   Y LD++E+ R + WT
Sbjct: 1042 LTSKEDIEYIRDAL--TVGKNEEDAKKYFLDQIEVCRDKGWT 1081

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>L_RABVS (P16289) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2127

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
 Frame = +2

Query: 170  DPFYIVREEIQGSIGKLQAT----FHRWEQVSSNTGEYVHLTKELLTSCESIEWQV---D 328
            D  +  R  ++G +G   +     FH WE+V++     VH+ K  L+  ESI W +    
Sbjct: 1153 DQSFFSRGPLKGYLGSSTSMSTQLFHAWEKVTN-----VHVVKRALSLKESINWFITRDS 1207

Query: 329  ELEKTI--SVASRDPAYYGLDEVELSRRRNWTGSARNQIGTVR 451
             L + +  ++ S     + L+E  + +R   TGSA ++  + R
Sbjct: 1208 NLAQALIRNIMSLTGPDFPLEEAPVFKR---TGSALHRFKSAR 1247

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>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)|
          Length = 1157

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 38  PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 175
           P P PS  S P VPS+P         S   +PPA PA  +S+P  P
Sbjct: 691 PHPVPSAPSAPPVPSAPSVP------SAPPVPPAPPA--LSAPSVP 728

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>MYLK2_RABIT (P07313) Myosin light chain kinase 2, skeletal/cardiac muscle (EC|
           2.7.11.18) (MLCK2)
          Length = 607

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +2

Query: 44  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADP-ASGMSSPQDPFYIVREEIQGSIGK 217
           P PS       PS+P KD  +     G + PA P A G   P      V    +GS GK
Sbjct: 44  PGPSDTKQDPDPSTPKKDANTPAPEKGDVVPAQPSAGGSQGPAGEGGQVEAPAEGSAGK 102

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>YP73_GVCL (P41730) Hypothetical protein in P7.3 3'region|
          Length = 379

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 155 MSSPQDPFYIVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDEL 334
           MSS +   ++  E+++ S+   Q T+  WE+     G    +T EL T  E I    +  
Sbjct: 1   MSSAKTRLFLTIEKLKNSMDDPQMTYPFWEKFFPLLGNSTTITLELSTLSEMINEAAETA 60

Query: 335 EKTI 346
           E+ I
Sbjct: 61  EQLI 64

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>WEE1_SCHPO (P07527) Mitosis inhibitor protein kinase wee1 (EC 2.7.11.1) (P107|
           protein kinase homolog)
          Length = 877

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 17  TTWISSAPRPNPSLESTPRVPSSPGKDGRSV-GRSIGRIPPADPASGMSSPQDPFYIVRE 193
           T  +S   RP  ++  TP  PS+P K    V   S     P  P++  ++  D ++I RE
Sbjct: 383 TGLLSKQHRPRKNINFTPLPPSTPSKPSTFVRPHSSSTDSPPSPSTPSNTQTDSYFIQRE 442

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>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)|
          Length = 572

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 26  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQG 205
           ++  P+ NP        P +PG     +GR +G IPP  P      P  P     ++ +G
Sbjct: 30  VAPKPKVNPFRPGDSEPPPAPGAQRAQMGR-VGEIPP-PPPEDFPLPPPPLAGDGDDAEG 87

Query: 206 SIG 214
           ++G
Sbjct: 88  ALG 90

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>CI150_HUMAN (Q8IV03) Protein C9orf150|
          Length = 231

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +2

Query: 89  GKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGKLQATFH--RWEQVSSNT 262
           G  G S G S    PP+  +S  SSP       R     ++ +L+   H  R E V+   
Sbjct: 55  GGGGCSSGSSYCSFPPSLSSSSSSSPTSG--SPRGSHSSALERLETKLHLLRQEMVNLRA 112

Query: 263 GEYVHLTKELLT---SCESIEWQVDE 331
            + V L ++LL    S ESI+W ++E
Sbjct: 113 TD-VRLMRQLLVINESIESIKWMIEE 137

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>PYRD_NEIMB (Q9K1D7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 335

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 220 ELTNRALDLLPDDVEGVLRGAHAGGRIRGWDSTDR 116
           E +NR L LL D ++G L     GG + G DS D+
Sbjct: 270 EKSNRVLKLLADHIDGKLPIIGVGGIMEGEDSADK 304

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>TPM_MIMNO (Q9GZ69) Tropomyosin|
          Length = 284

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 182 IVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKELLTSCESIEWQVDELEKTISVA 355
           ++ E+ + S  KL +T  + E+ S    E     K L     S E ++DELEK +  A
Sbjct: 94  LLEEDYERSEEKLNSTTEKLEEASKAADESERNRKVLEGRSNSYEERIDELEKQLETA 151

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>PO14_NASVI (Q03272) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R1 4 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R1 4)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 392

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +2

Query: 278 LTKELLTSCESIEWQVDELEKTISVASRDPAYYGLDEVELSRRRNWTGSARN 433
           + K ++  C +I+ +V E  KT+ +  + P   G   V+++R+    G ARN
Sbjct: 25  VVKHIVERCSAIKLEVSE-SKTVGIFVKKPKVVGSKAVKINRKDCRKGGARN 75

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>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
 Frame = +2

Query: 38  PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGK 217
           P+P      T R  S PG    +    +GR+ P  P     S  +P     E    S   
Sbjct: 271 PQPGSRQAETARATSVPGPAQAAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATA 330

Query: 218 LQATFHRWEQVSSN-TGEYVHLTKELLTSCESI 313
           + A     EQ     TG+   L   LLT   ++
Sbjct: 331 VPAGLGATEQTQEGLTGKLFGLGASLLTQASTL 363

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>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 957

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 44  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQD 172
           P     STP +P  PG+   +V  S   +PP  P    S+P D
Sbjct: 800 PRLGTTSTPNLPPPPGRGSSNVTSSY--LPPPPPPKPQSNPYD 840

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>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta)
           (BRG-1 protein) (Mitotic growth and transcription
           activator) (Brahma protein homolog 1) (SWI/SNF-related
           matrix-associated actin
          Length = 1647

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
 Frame = +2

Query: 44  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS----SPQDPFYIVREEIQGSI 211
           P+P L  TPR   SPG  G S G  +G  P   P S  S    SP  P        QG  
Sbjct: 4   PDPPLGGTPRPGPSPG-PGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPG 62

Query: 212 GKLQATFHR 238
           G  Q   H+
Sbjct: 63  GYPQDNMHQ 71

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>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
 Frame = +2

Query: 5   TNRRTTWISSAPRPNPSLESTPRVPSSPG-KDGRSVGRSIGRIPPADP------ASGMSS 163
           T++ TT    AP P P     P     PG   G   GRS      A P      +SG SS
Sbjct: 76  TSKETTTAKPAPGPKPGPGPKPTPGPRPGSSSGPKPGRSSAARTSATPRPGLIKSSGASS 135

Query: 164 PQDP 175
            Q+P
Sbjct: 136 QQEP 139

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>PYRD_NEIMA (Q9JX66) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 335

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 220 ELTNRALDLLPDDVEGVLRGAHAGGRIRGWDSTDR 116
           E +NR L LL D ++G L     GG + G D+ D+
Sbjct: 270 EKSNRVLKLLADHIDGKLPIIGVGGIMEGGDAADK 304

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>H1_MAIZE (P23444) Histone H1|
          Length = 245

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +2

Query: 26  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIP-PADPASGMSSPQDPFYIVR 190
           +SSA +PNP  ++ P+ P +  K  ++  +   + P  A PA+       P  +V+
Sbjct: 116 LSSATKPNPKPKAAPKKPKTGAKKPKAAAKPKAKTPAKAKPATKPKPAAKPKAVVK 171

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>TGAS_STRMB (P81453) Protein-glutamine gamma-glutamyltransferase precursor (EC|
           2.3.2.13) (Transglutaminase) (TGase) (MTG)
          Length = 407

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
 Frame = +2

Query: 59  ESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGKLQATFHR 238
           ES P   SS G   R+        PPA+P   M  P  P Y   E +  +         +
Sbjct: 61  ESAPAA-SSAGPSFRAPDSDDRVTPPAEPLDRMPDPYRPSYGRAETVVNNY------IRK 113

Query: 239 WEQV-SSNTGEYVHLTKE----LLTSCESIEW 319
           W+QV S   G    +T+E    L   C  + W
Sbjct: 114 WQQVYSHRDGRKQQMTEEQREWLSYGCVGVTW 145

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>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 29  SSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGR 127
           S APRP P        P +PG D    GR  GR
Sbjct: 39  SLAPRPGPEPSRPRAAPETPGGDTAGAGRCGGR 71

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>R1A_SOLDE (Q8W1E0) Late blight resistance protein R1-A (Protein R1)|
          Length = 1293

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 197 IQGSIGKLQATFHRWEQVSSNTGEYVH 277
           + G + +++     WEQV++N G Y+H
Sbjct: 746 VAGILSEMEKEVECWEQVANNLGSYIH 772

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>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +2

Query: 38   PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQ 169
            P+ +P +  TP  P  PG  G   G  +   P      G+  PQ
Sbjct: 991  PKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQ 1034

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>DMBT1_HUMAN (Q9UGM3) Deleted in malignant brain tumors 1 protein precursor|
            (Glycoprotein 340) (Gp-340) (Surfactant
            pulmonary-associated D-binding protein)
          Length = 2413

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/61 (29%), Positives = 22/61 (36%)
 Frame = -1

Query: 246  CSQRWKVAWSLPIEPWISSRTM*KGSCGELMPEAGSAGGIRPIDRPTDRPSFPGDEGTLG 67
            CS      WS P   W+S         G +   + S     P   PT R S  G E TL 
Sbjct: 1449 CSGHESYLWSCPHNGWLSHNCGHHEDAGVICSASQSQPTPSPDTWPTSRASTAGSESTLA 1508

Query: 66   V 64
            +
Sbjct: 1509 L 1509

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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +2

Query: 65  TPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 175
           TPR P  PG+ G          PP  PA+G S P  P
Sbjct: 372 TPRGPPPPGRGGPP--------PPPPPATGRSGPPPP 400

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>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   RPTAEPHGSPPRRAQILASSLL 68
           RPT EP G PPRRA      LL
Sbjct: 211 RPTPEPPGGPPRRAHFWLHFLL 232

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>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +2

Query: 44  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFYIVREEIQGSIGKLQ 223
           P P  ++  R   SPG    SVG+S    P + P +G+     P  +  EE    +G   
Sbjct: 729 PKPPRQALNRKKGSPGLASGSVGQS----PNSAPKAGLPGATGPMAVRPEEAVRGLGAGT 784

Query: 224 ATFHRWEQVSSNTG 265
            +  R ++  S  G
Sbjct: 785 ESSRRAQEPVSGCG 798

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>RRBP1_HUMAN (Q9P2E9) Ribosome-binding protein 1 (Ribosome receptor protein) (180|
            kDa ribosome receptor homolog) (ES/130-related protein)
          Length = 1410

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/83 (24%), Positives = 31/83 (37%)
 Frame = +2

Query: 2    ATNRRTTWISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDPFY 181
            A    T W+       P+L   P  P+ P  D  S  R        +  S + +  D + 
Sbjct: 1078 AQQNYTEWLQDLKEKGPTLLKHPPAPAEPSSDLASKLRE-----AEETQSTLQAECDQYR 1132

Query: 182  IVREEIQGSIGKLQATFHRWEQV 250
             +  E +G +  LQ +    EQV
Sbjct: 1133 SILAETEGMLRDLQKSVEEEEQV 1155

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>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
            (Amplified in breast cancer-1 protein homolog) (AIB-1)
            (Fragment)
          Length = 1082

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +2

Query: 11   RRTTWISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPAD----PASGMSSPQDPF 178
            +R   + S P+P  +    P V +SP  DG   G ++ + PP         GM  P +P 
Sbjct: 924  QRMAMMMSQPQPQ-AFSPPPNVTASPSMDGVLAGSAMPQAPPQQFPYATNYGMGQPPEPA 982

Query: 179  Y 181
            +
Sbjct: 983  F 983

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>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial precursor (EC|
           2.7.7.6) (MtRPOL)
          Length = 1230

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 138 AGGIRPIDRPTDRPSFPGDEGTLG 67
           A G++   RP  RP  PG EGT G
Sbjct: 10  AAGLKRALRPCGRPGLPGKEGTAG 33

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>IQGA3_HUMAN (Q86VI3) Ras GTPase-activating-like protein IQGAP3|
          Length = 1631

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 164 PQDPFYIVREEIQGSIGKLQATFHRWEQVSSNTGEYVHLTKEL 292
           P +  ++ REEIQ ++ K+ A + R +   +N G  + L   L
Sbjct: 699 PLNTSHLTREEIQSAVTKVTAAYDRQQLWKANVGFVIQLQARL 741


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,725,303
Number of Sequences: 219361
Number of extensions: 1622996
Number of successful extensions: 6416
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 5883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6393
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result