>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  240 bits (613), Expect = 8e-64
 Identities = 119/120 (99%), Positives = 119/120 (99%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 233
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 234 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 413
           WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  210 bits (534), Expect = 1e-54
 Identities = 107/122 (87%), Positives = 111/122 (90%), Gaps = 2/122 (1%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 230
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 231 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 407
            +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119

Query: 408 GG 413
           GG
Sbjct: 120 GG 121

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  176 bits (446), Expect = 2e-44
 Identities = 92/126 (73%), Positives = 106/126 (84%), Gaps = 6/126 (4%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 221
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 222 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 395
            TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 396 DNTMGG 413
           DN M G
Sbjct: 121 DNMMDG 126

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  167 bits (422), Expect = 1e-41
 Identities = 89/124 (71%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 227
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 228 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 401
           D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114

Query: 402 TMGG 413
           TM G
Sbjct: 115 TMDG 118

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  123 bits (309), Expect = 1e-28
 Identities = 66/115 (57%), Positives = 80/115 (69%)
 Frame = +3

Query: 69  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 248
           S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23  SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 249 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 413
           YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M G
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDG 130

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  123 bits (308), Expect = 2e-28
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
 Frame = +3

Query: 69  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 242
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 243 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 413
           LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDG 130

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  121 bits (304), Expect = 6e-28
 Identities = 66/131 (50%), Positives = 86/131 (65%), Gaps = 11/131 (8%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 203
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 204 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 380
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 381 RKYDFDNTMGG 413
           R+Y+ DN M G
Sbjct: 120 RQYNLDNNMDG 130

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  121 bits (304), Expect = 6e-28
 Identities = 66/131 (50%), Positives = 86/131 (65%), Gaps = 11/131 (8%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 203
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 204 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 380
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 381 RKYDFDNTMGG 413
           R+Y+ DN M G
Sbjct: 120 RQYNLDNNMDG 130

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  118 bits (296), Expect = 5e-27
 Identities = 68/130 (52%), Positives = 81/130 (62%), Gaps = 16/130 (12%)
 Frame = +3

Query: 72  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 209
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 210 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 383
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 384 KYDFDNTMGG 413
           +Y+ DN + G
Sbjct: 125 QYNLDNKLDG 134

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  117 bits (293), Expect = 1e-26
 Identities = 65/121 (53%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
 Frame = +3

Query: 63  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 230
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 231 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 410
           +WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ 
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133

Query: 411 G 413
           G
Sbjct: 134 G 134

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  112 bits (281), Expect = 3e-25
 Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
 Frame = +3

Query: 81  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 251
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 413
           D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   G
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDG 134

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  112 bits (281), Expect = 3e-25
 Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = +3

Query: 84  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 260
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 261 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 410
           DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLG 127

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  112 bits (279), Expect = 4e-25
 Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 14/132 (10%)
 Frame = +3

Query: 60  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 197
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 198 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 377
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 378 LRKYDFDNTMGG 413
           LR Y +DN + G
Sbjct: 116 LRDYSYDNNVDG 127

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  111 bits (277), Expect = 7e-25
 Identities = 63/107 (58%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +3

Query: 81  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 251
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYD 392
           DISDDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+ D
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQLD 127

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  110 bits (276), Expect = 1e-24
 Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 14/132 (10%)
 Frame = +3

Query: 60  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 197
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 198 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 377
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ 
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 378 LRKYDFDNTMGG 413
           L+ Y  DN + G
Sbjct: 118 LKTYQLDNKLDG 129

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +3

Query: 216 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 386
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 387 YDFDNTMGG 413
             F+N   G
Sbjct: 95  ASFNNIEDG 103

>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +3

Query: 84  APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 263
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 264 D--QQDITRGKGIVDSLFQAPTGDG 332
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -3

Query: 331 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 185
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 30  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 137
           QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 52  QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 386
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239

>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +3

Query: 162 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 320
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S +  P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740

>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 421

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 219 RNTDKWKGLAYDISDDQQDITRGKGI 296
           R+  K KG A++ISDD + +   KGI
Sbjct: 46  RDVKKHKGYAFEISDDLESVIEDKGI 71

>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -2

Query: 413 ASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 243
           A  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 178 AGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  AHPPLLARSTKQHRDGCCLLLHRRGSG 91
           A  P L RST+Q   G C    RRGSG
Sbjct: 315 AELPSLRRSTRQKTTGSCASTSRRGSG 341

>SWC3_ASHGO (Q758T8) SWR1-complex protein 3|
          Length = 688

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +3

Query: 60  AAFSSTVGAPASTPTNF-LGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKW 236
           A  SST GAP      F  G  + K  TSA+  HG  S+      + AE     R   K+
Sbjct: 434 ATLSSTDGAPPLNRRQFPCGIWVTKMQTSALEAHGAISEKGTTITIKAEEGTAPRQKRKY 493

Query: 237 KGLAYDISDDQQDI 278
                ++ D+ + +
Sbjct: 494 TKRKKEVEDEDKSM 507

>HTRA_LACLA (Q9LA06) Serine protease do-like htrA (EC 3.4.21.-) (HtrALl)|
          Length = 408

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 24/107 (22%), Positives = 46/107 (42%)
 Frame = +3

Query: 72  STVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAY 251
           S V    +T      KK+   V S +NY   +S+++ F+ +   N     +TD  + L+ 
Sbjct: 48  SNVSVNVNTDVTSAIKKVSNSVVSVMNYQKDNSQSSDFSSIFGGNSGSSSSTDGLQ-LSS 106

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYD 392
           + S      + G   V + +    G+ + + +LS  + V   +  YD
Sbjct: 107 EGSGVIYKKSGGDAYVVTNYHVIAGNSSLDVLLSGGQKVKASVVGYD 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.118    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,292,248
Number of Sequences: 219361
Number of extensions: 944662
Number of successful extensions: 2654
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2645
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)