>XKS1_YEAST (P42826) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 600

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 29/63 (46%), Positives = 38/63 (60%)
 Frame = +2

Query: 281 FLGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPTIMW 460
           +LG D STQ +K   ++ +L IV SETV F+ +LPHY T+ GVY        I  P  MW
Sbjct: 23  YLGFDLSTQQLKCLAINQDLKIVHSETVEFEKDLPHYHTKKGVY---IHGDTIECPVAMW 79

Query: 461 VEA 469
           +EA
Sbjct: 80  LEA 82

>XYLB_PONPY (Q5R830) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 580

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 27/62 (43%), Positives = 38/62 (61%)
 Frame = +2

Query: 284 LGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPTIMWV 463
           LG D STQ VK   +  EL +   E+V+FD +LP + T+GGV+    D   + SP +MWV
Sbjct: 11  LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVH-KDGLTVTSPVLMWV 69

Query: 464 EA 469
           +A
Sbjct: 70  QA 71

>XYLB_RAT (Q3MIF4) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 536

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +2

Query: 284 LGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPTIMWV 463
           LG D STQ VK   +  EL +   ++V+FD +LP + T+GGV+    D   + SP +MWV
Sbjct: 11  LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWV 69

Query: 464 EA 469
           +A
Sbjct: 70  QA 71

>XYLB_MOUSE (Q3TNA1) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 551

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +2

Query: 284 LGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPTIMWV 463
           LG D STQ VK   +  EL +   ++V+FD +LP + T+GGV+    D   + SP +MWV
Sbjct: 26  LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWV 84

Query: 464 EA 469
           +A
Sbjct: 85  QA 86

>XYLB_BOVIN (Q3SYZ6) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 490

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/62 (40%), Positives = 37/62 (59%)
 Frame = +2

Query: 284 LGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPTIMWV 463
           LG D STQ VK   +  EL +   ++V+FD +L  + T+GGV+    D   + SP +MWV
Sbjct: 11  LGWDFSTQQVKVVAVDAELSVFYEDSVHFDRDLVEFGTQGGVHVH-KDGLTVTSPVLMWV 69

Query: 464 EA 469
           +A
Sbjct: 70  QA 71

>YNE7_CAEEL (P30646) Hypothetical protein R08D7.7 in chromosome III|
          Length = 537

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 281 FLGLDSSTQSVKATVLSNELIIVASETVNFDS--ELPHYKTEGGVYRDPTDDGRIYSPTI 454
           FLG+D STQ +KA ++     +V +  +NF +  +L  + TE GV++   +   I SP I
Sbjct: 5   FLGIDLSTQQIKAVIIDQNGKVVHTTAINFSTHEKLKKFGTENGVHK---NGSVITSPVI 61

Query: 455 MWVEA 469
           MW+EA
Sbjct: 62  MWIEA 66

>XYLB_HUMAN (O75191) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 527

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +2

Query: 284 LGLDSSTQSVKATVLSNELIIVASETVNFDSELP---HYKTEGGVYRDPTDDGRIYSPTI 454
           LG D STQ VK   +  EL +   E+V+FD +LP   H     GV+    D   + SP +
Sbjct: 11  LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGHVLDVHGVHVH-KDGLTVTSPVL 69

Query: 455 MWVEA 469
           MWV+A
Sbjct: 70  MWVQA 74

>RNH2_CHLMU (Q9PL10) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 217

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +2

Query: 209 AGADEADRSPAA---MVGRSSLPDGALFLGLDSS 301
           AG DEA R P A   + G   LP G LFLG+D S
Sbjct: 30  AGVDEAGRGPLAGPVVAGACILPGGKLFLGIDDS 63

>XYLB_STRRU (P27156) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 481

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 260 SLPDGALFLGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEG-GVYRDP 421
           S  +G L +G+D+STQS KA V+      VA+  V    + PH  T G G   DP
Sbjct: 2   SAAEGPLVVGVDTSTQSTKALVVD-----VATGRVVASGQAPHTVTSGAGRESDP 51

>NPD2_PSESM (Q885X7) NAD-dependent deacetylase 2 (EC 3.5.1.-) (Regulatory|
           protein SIR2 homolog 2)
          Length = 248

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 305 QSVKATVLSNELIIVASETVNFDSELPHYKTEGGVYRDPTDDG 433
           Q+  A   +  ++++    ++ DS LP Y+  GG+Y   T+DG
Sbjct: 3   QAASALRHAKRILVITGAGLSADSGLPTYRGVGGLYNGETEDG 45

>YDHQ_ECOLI (P77552) Hypothetical protein ydhQ|
          Length = 418

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 221 EADRSPAAMVGRSSLPDGA-LFLGLDSSTQSVKATVLSNELIIVASETVNFDS 376
           E DR+P  + G  +L DGA + +G  +  Q    TV    ++I+   TV  DS
Sbjct: 272 EEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDS 324

>YDHQ_ECO57 (Q8X621) Hypothetical protein ydhQ|
          Length = 418

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 221 EADRSPAAMVGRSSLPDGA-LFLGLDSSTQSVKATVLSNELIIVASETVNFDS 376
           E DR+P  + G  +L DGA + +G  +  Q    TV    ++I+   TV  DS
Sbjct: 272 EEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDS 324

>MODC_RHOPA (Q6N0P7) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)|
          Length = 373

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 338 LIIVASETVNFDSELPHYKTEGGVYRDPTDDGRIYSPT 451
           L I     VNFD+E+  Y  + G+ R   D GR+  P+
Sbjct: 235 LAIARDAAVNFDAEVESYDADYGLVRLQIDGGRLLVPS 272

>XYLB_KLEPN (P29444) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 483

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 278 LFLGLDSSTQSVKATVLSNELIIVASETVNFDSELPH 388
           +++G+D  T  VKA +L+ +  +VAS T       PH
Sbjct: 1   MYIGIDLGTSGVKAILLNEQGEVVASHTEKLTVSRPH 37

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 216  PTRRTGHRQPWSGGALSRMGPSSSDSTAPP 305
            P+ R G   P SGG L    PSS D  +PP
Sbjct: 955  PSPRGGPFNPSSGGPLPASSPSSFDGPSPP 984

>Y1620_METJA (Q59015) Hypothetical protein MJ1620|
          Length = 505

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +2

Query: 203 IRAGADEADRSPAAMVGRSSLPDGALFLGLDSSTQSVKATV-----LSNELIIVASETVN 367
           I  G +  D++   ++GR + PD  L     +   ++KA V     L  E    A  TVN
Sbjct: 324 IYIGCESGDKNHCKLLGRPTTPDDVLKAVKIAKKYNLKAQVYFIYGLPGENEETAKNTVN 383

Query: 368 FDSELPHYKTEGGVYR 415
           F  ++ +Y  +  VY+
Sbjct: 384 FMHKIKNYIDKITVYK 399

>XYLB_STRCO (Q9RK00) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)|
          Length = 481

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 260 SLPDGALFLGLDSSTQSVKATVLSNELIIVASETVNFDSELPHYKTEG-GVYRDP 421
           S  +G L +G+D+STQS KA V+       A+  V    + PH  + G G   DP
Sbjct: 2   SAAEGPLVVGVDTSTQSTKALVVD-----AATGRVVASGQAPHTVSSGTGRESDP 51

>S12A3_PSEAM (P55019) Solute carrier family 12 member 3 (Thiazide-sensitive|
           sodium-chloride cotransporter) (Na-Cl symporter)
          Length = 1023

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -3

Query: 460 PHYGW*INTAVICRIS-VNPTLGFVVR*LRVKINSFRSDYY*LIAEHSSFHRLGGAVESE 284
           PHY +  NT V  R   V P+L       ++ ++  + D+   + E ++  R+GG   SE
Sbjct: 64  PHYDFYANTEVWGRRRRVRPSL------YQLSVDPEQDDFKPPMYEETAGERMGGGDSSE 117

Query: 283 EEGPIRERAPPD 248
           EE    +  PP+
Sbjct: 118 EEEEEHKEPPPE 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,944,242
Number of Sequences: 219361
Number of extensions: 1169214
Number of successful extensions: 3465
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3462
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)