ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12o15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479289.1| Oryza sativa (japonica cultivar-group), mRNA 220 3e-54
2dbj|AK070161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3gb|AY106929.1| Zea mays PCO080951 mRNA sequence 182 8e-43
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
5dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
6dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
7ref|NM_203186.1| Arabidopsis thaliana xylulokinase AT5G49650 tra... 52 0.002
8ref|NM_124343.1| Arabidopsis thaliana xylulokinase AT5G49650 tra... 52 0.002
9gb|AY142596.1| Arabidopsis thaliana putative xylulose kinase (At... 52 0.002
10gb|AY050843.1| Arabidopsis thaliana putative xylulose kinase (At... 52 0.002
11gb|AC142211.3| Mus musculus BAC clone RP24-501B23 from chromosom... 44 0.45
12gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome... 44 0.45
13gb|DQ227765.1| Danio rerio supervillin (svil) mRNA, complete cds 42 1.8
14gb|BC055667.1| Danio rerio supervillin, mRNA (cDNA clone IMAGE:2... 42 1.8
15gb|BT025232.1| Drosophila melanogaster FI01005 full insert cDNA 42 1.8
16gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co... 42 1.8
17gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.8
18emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chro... 42 1.8
19gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete s... 42 1.8
20emb|AL590547.3| Human DNA sequence from clone RP11-367A10 on chr... 42 1.8
21emb|AL583859.9| Human DNA sequence from clone RP11-271F18 on chr... 42 1.8
22gb|AC175379.4| Mus musculus chromosome 5, clone wi1-1377G23, com... 42 1.8
23emb|BX927102.12| Zebrafish DNA sequence from clone CH211-139C17 ... 42 1.8
24gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell... 42 1.8
25gb|AY122223.1| Drosophila melanogaster RE21150 full insert cDNA 42 1.8
26gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell ... 42 1.8
27ref|NM_139928.3| Drosophila melanogaster Mediator complex subuni... 42 1.8
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
29gb|AF289998.1|AF289998 Drosophila melanogaster thyroid hormone r... 42 1.8
30dbj|AB025627.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
31gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29... 42 1.8
32gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
33emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.8
34ref|NM_001035261.1| Danio rerio supervillin (svil), mRNA 42 1.8
35gb|AC158487.2| Capitella capitata clone JGIAUTO-1A15, complete s... 40 7.0
36gb|AC024028.10| Homo sapiens BAC clone RP11-151M24 from 7, compl... 40 7.0
37gb|AC002068.1| Homo sapiens BAC clone CTA-242D1 from 7, complete... 40 7.0
38emb|AL391422.17| Human DNA sequence from clone RP11-420L9 on chr... 40 7.0
39emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chr... 40 7.0
40emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.0
41emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 7.0
42emb|BX511145.13| Zebrafish DNA sequence from clone DKEY-34N18 in... 40 7.0
43emb|CR858843.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0510 (from cl... 40 7.0
44dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
45emb|BX324190.13| Zebrafish DNA sequence from clone CH211-220I18 ... 40 7.0
46gb|AC004261.3| Arabidopsis thaliana chromosome 2 clone T3K9 map ... 40 7.0
47gb|AC157279.2| Mus musculus BAC clone RP23-149H21 from chromosom... 40 7.0
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
49dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
50gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complet... 40 7.0
51dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
52dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.0
53dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.0
54dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
55dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
56dbj|AK100512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
57emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in ... 40 7.0
58emb|BX510941.5| Zebrafish DNA sequence from clone DKEY-155D18 in... 40 7.0
59emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.0
60emb|BX005273.6| Mouse DNA sequence from clone RP23-302D6 on chro... 40 7.0
61emb|AL929328.8| Mouse DNA sequence from clone RP23-332P16 on chr... 40 7.0
62gb|AC018450.26| Homo sapiens 3 BAC RP11-80H8 (Roswell Park Cance... 40 7.0
63gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome... 40 7.0 
>ref|XM_479289.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2185

 Score =  220 bits (111), Expect = 3e-54
 Identities = 240/283 (84%)
 Strand = Plus / Plus

                                                                       
Query: 237 cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
           ||||||||||||| ||||||||||| |||||||| ||  |||||||||||||| ||||||
Sbjct: 275 cggcagccatggtggggcggagctccctcccggagggttccctcttcctcggattcgaca 334

                                                                       
Query: 297 gctccacccagtctgtgaaagctactgtgctcagcaatgagttaataatagtcgcttctg 356
           ||||||| |||||  | |||||||| ||||| | ||| || || |||||||| ||||| |
Sbjct: 335 gctccactcagtccctaaaagctaccgtgctgaacaacgaattgataatagtagcttcag 394

                                                                       
Query: 357 aaactgttaattttgactctgagttaccgcactacaaaaccgagggtggggtttacagag 416
           | | |||||| ||||| ||||| ||||||||||||||||| || ||||| ||||||||||
Sbjct: 395 atattgttaactttgattctgacttaccgcactacaaaacagaaggtggtgtttacagag 454

                                                                       
Query: 417 atcctacagatgacggccgtatttattcaccaaccataatgtgggtggaggctttggaat 476
           ||||| ||||||| ||||  || | ||||||||| ||||||||||| || || || ||||
Sbjct: 455 atcctgcagatgatggccacatattttcaccaacaataatgtgggttgaagcctttgaat 514

                                                      
Query: 477 tgctgcttgagaaactaaaaccgaagatcaacttcagtaaggt 519
           |||| |||||||| ||||| || ||||||||||| || |||||
Sbjct: 515 tgctacttgagaagctaaagccaaagatcaactttagcaaggt 557
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>dbj|AK070161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045I10, full
           insert sequence
          Length = 2185

 Score =  220 bits (111), Expect = 3e-54
 Identities = 240/283 (84%)
 Strand = Plus / Plus

                                                                       
Query: 237 cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
           ||||||||||||| ||||||||||| |||||||| ||  |||||||||||||| ||||||
Sbjct: 275 cggcagccatggtggggcggagctccctcccggagggttccctcttcctcggattcgaca 334

                                                                       
Query: 297 gctccacccagtctgtgaaagctactgtgctcagcaatgagttaataatagtcgcttctg 356
           ||||||| |||||  | |||||||| ||||| | ||| || || |||||||| ||||| |
Sbjct: 335 gctccactcagtccctaaaagctaccgtgctgaacaacgaattgataatagtagcttcag 394

                                                                       
Query: 357 aaactgttaattttgactctgagttaccgcactacaaaaccgagggtggggtttacagag 416
           | | |||||| ||||| ||||| ||||||||||||||||| || ||||| ||||||||||
Sbjct: 395 atattgttaactttgattctgacttaccgcactacaaaacagaaggtggtgtttacagag 454

                                                                       
Query: 417 atcctacagatgacggccgtatttattcaccaaccataatgtgggtggaggctttggaat 476
           ||||| ||||||| ||||  || | ||||||||| ||||||||||| || || || ||||
Sbjct: 455 atcctgcagatgatggccacatattttcaccaacaataatgtgggttgaagcctttgaat 514

                                                      
Query: 477 tgctgcttgagaaactaaaaccgaagatcaacttcagtaaggt 519
           |||| |||||||| ||||| || ||||||||||| || |||||
Sbjct: 515 tgctacttgagaagctaaagccaaagatcaactttagcaaggt 557
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>gb|AY106929.1| Zea mays PCO080951 mRNA sequence
          Length = 504

 Score =  182 bits (92), Expect = 8e-43
 Identities = 233/280 (83%)
 Strand = Plus / Plus

                                                                       
Query: 237 cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
           |||| ||||||| ||||||   ||| |||||||| ||  | |||||||||||  | ||||
Sbjct: 66  cggcggccatggccgggcgagactccctcccggagggttctctcttcctcgggttggaca 125

                                                                       
Query: 297 gctccacccagtctgtgaaagctactgtgctcagcaatgagttaataatagtcgcttctg 356
           ||||||| || ||  |||||||||| |||||||  |||||| | | |||||| |||||||
Sbjct: 126 gctccactcaatcactgaaagctacggtgctcaataatgagctcacaatagtagcttctg 185

                                                                       
Query: 357 aaactgttaattttgactctgagttaccgcactacaaaaccgagggtggggtttacagag 416
           ||| |||||||||||||||||| || || ||||||||||| || |||||||| |||||||
Sbjct: 186 aaattgttaattttgactctgaattgccacactacaaaactgaaggtggggtgtacagag 245

                                                                       
Query: 417 atcctacagatgacggccgtatttattcaccaaccataatgtgggtggaggctttggaat 476
           | ||  |||||||  | |  |||| |||||||||||| ||||||||||| ||||||||  
Sbjct: 246 acccagcagatgataggcacattttttcaccaaccattatgtgggtggaagctttggagg 305

                                                   
Query: 477 tgctgcttgagaaactaaaaccgaagatcaacttcagtaa 516
           ||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 306 tgctgcttgagaagctaaaaccaaagatcaacttctgtaa 345
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  147 bits (74), Expect = 4e-32
 Identities = 173/206 (83%)
 Strand = Plus / Plus

                                                                            
Query: 314      aaagctactgtgctcagcaatgagttaataatagtcgcttctgaaactgttaattttgac 373
                |||||||| ||||| | ||| || || |||||||| ||||| || | |||||| ||||| 
Sbjct: 26588486 aaagctaccgtgctgaacaacgaattgataatagtagcttcagatattgttaactttgat 26588545

                                                                            
Query: 374      tctgagttaccgcactacaaaaccgagggtggggtttacagagatcctacagatgacggc 433
                ||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 26588546 tctgacttaccgcactacaaaacagaaggtggtgtttacagagatcctgcagatgatggc 26588605

                                                                            
Query: 434      cgtatttattcaccaaccataatgtgggtggaggctttggaattgctgcttgagaaacta 493
                |  || | ||||||||| ||||||||||| || || || |||||||| |||||||| |||
Sbjct: 26588606 cacatattttcaccaacaataatgtgggttgaagcctttgaattgctacttgagaagcta 26588665

                                          
Query: 494      aaaccgaagatcaacttcagtaaggt 519
                || || ||||||||||| || |||||
Sbjct: 26588666 aagccaaagatcaactttagcaaggt 26588691



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 237      cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
                ||||||||||||| ||||||||||| |||||||| ||  |||||||||||||| ||||||
Sbjct: 26587428 cggcagccatggtggggcggagctccctcccggagggttccctcttcctcggattcgaca 26587487

                            
Query: 297      gctccacccagt 308
                ||||||| ||||
Sbjct: 26587488 gctccactcagt 26587499
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score =  147 bits (74), Expect = 4e-32
 Identities = 173/206 (83%)
 Strand = Plus / Plus

                                                                          
Query: 314    aaagctactgtgctcagcaatgagttaataatagtcgcttctgaaactgttaattttgac 373
              |||||||| ||||| | ||| || || |||||||| ||||| || | |||||| ||||| 
Sbjct: 133757 aaagctaccgtgctgaacaacgaattgataatagtagcttcagatattgttaactttgat 133816

                                                                          
Query: 374    tctgagttaccgcactacaaaaccgagggtggggtttacagagatcctacagatgacggc 433
              ||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 133817 tctgacttaccgcactacaaaacagaaggtggtgtttacagagatcctgcagatgatggc 133876

                                                                          
Query: 434    cgtatttattcaccaaccataatgtgggtggaggctttggaattgctgcttgagaaacta 493
              |  || | ||||||||| ||||||||||| || || || |||||||| |||||||| |||
Sbjct: 133877 cacatattttcaccaacaataatgtgggttgaagcctttgaattgctacttgagaagcta 133936

                                        
Query: 494    aaaccgaagatcaacttcagtaaggt 519
              || || ||||||||||| || |||||
Sbjct: 133937 aagccaaagatcaactttagcaaggt 133962



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 237    cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
              ||||||||||||| ||||||||||| |||||||| ||  |||||||||||||| ||||||
Sbjct: 132699 cggcagccatggtggggcggagctccctcccggagggttccctcttcctcggattcgaca 132758

                          
Query: 297    gctccacccagt 308
              ||||||| ||||
Sbjct: 132759 gctccactcagt 132770
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0524G08
          Length = 146690

 Score =  147 bits (74), Expect = 4e-32
 Identities = 173/206 (83%)
 Strand = Plus / Plus

                                                                        
Query: 314  aaagctactgtgctcagcaatgagttaataatagtcgcttctgaaactgttaattttgac 373
            |||||||| ||||| | ||| || || |||||||| ||||| || | |||||| ||||| 
Sbjct: 6090 aaagctaccgtgctgaacaacgaattgataatagtagcttcagatattgttaactttgat 6149

                                                                        
Query: 374  tctgagttaccgcactacaaaaccgagggtggggtttacagagatcctacagatgacggc 433
            ||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 6150 tctgacttaccgcactacaaaacagaaggtggtgtttacagagatcctgcagatgatggc 6209

                                                                        
Query: 434  cgtatttattcaccaaccataatgtgggtggaggctttggaattgctgcttgagaaacta 493
            |  || | ||||||||| ||||||||||| || || || |||||||| |||||||| |||
Sbjct: 6210 cacatattttcaccaacaataatgtgggttgaagcctttgaattgctacttgagaagcta 6269

                                      
Query: 494  aaaccgaagatcaacttcagtaaggt 519
            || || ||||||||||| || |||||
Sbjct: 6270 aagccaaagatcaactttagcaaggt 6295



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                        
Query: 237  cggcagccatggtcgggcggagctctctcccggatggggccctcttcctcggactcgaca 296
            ||||||||||||| ||||||||||| |||||||| ||  |||||||||||||| ||||||
Sbjct: 5032 cggcagccatggtggggcggagctccctcccggagggttccctcttcctcggattcgaca 5091

                        
Query: 297  gctccacccagt 308
            ||||||| ||||
Sbjct: 5092 gctccactcagt 5103
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>ref|NM_203186.1| Arabidopsis thaliana xylulokinase AT5G49650 transcript variant
           AT5G49650.2 mRNA, complete cds
          Length = 1983

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 276 ccctcttcctcggactcgacagctccacccagtctgtgaaagctactgtg 325
           |||||||||||||  |||||||||| ||||||||  ||||||| ||||||
Sbjct: 146 ccctcttcctcggcttcgacagctctacccagtcaatgaaagcaactgtg 195
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>ref|NM_124343.1| Arabidopsis thaliana xylulokinase AT5G49650 transcript variant
           AT5G49650.1 mRNA, complete cds
          Length = 1988

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 276 ccctcttcctcggactcgacagctccacccagtctgtgaaagctactgtg 325
           |||||||||||||  |||||||||| ||||||||  ||||||| ||||||
Sbjct: 146 ccctcttcctcggcttcgacagctctacccagtcaatgaaagcaactgtg 195
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>gb|AY142596.1| Arabidopsis thaliana putative xylulose kinase (At5g49650) mRNA,
           complete cds
          Length = 1708

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 276 ccctcttcctcggactcgacagctccacccagtctgtgaaagctactgtg 325
           |||||||||||||  |||||||||| ||||||||  ||||||| ||||||
Sbjct: 29  ccctcttcctcggcttcgacagctctacccagtcaatgaaagcaactgtg 78
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>gb|AY050843.1| Arabidopsis thaliana putative xylulose kinase (At5g49650) mRNA,
           complete cds
          Length = 2004

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 276 ccctcttcctcggactcgacagctccacccagtctgtgaaagctactgtg 325
           |||||||||||||  |||||||||| ||||||||  ||||||| ||||||
Sbjct: 146 ccctcttcctcggcttcgacagctctacccagtcaatgaaagcaactgtg 195
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>gb|AC142211.3| Mus musculus BAC clone RP24-501B23 from chromosome 8, complete sequence
          Length = 175636

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 80    tactaatatttgtttgtttgtt 101
             ||||||||||||||||||||||
Sbjct: 32031 tactaatatttgtttgtttgtt 32010
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>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 80     tactaatatttgtttgtttgtt 101
              ||||||||||||||||||||||
Sbjct: 136962 tactaatatttgtttgtttgtt 136941
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>gb|DQ227765.1| Danio rerio supervillin (svil) mRNA, complete cds
          Length = 6432

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 88   tttgtttgtttgttgatcagt 108
            |||||||||||||||||||||
Sbjct: 5856 tttgtttgtttgttgatcagt 5876
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>gb|BC055667.1| Danio rerio supervillin, mRNA (cDNA clone IMAGE:2600647), partial cds
          Length = 2447

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 88   tttgtttgtttgttgatcagt 108
            |||||||||||||||||||||
Sbjct: 1871 tttgtttgtttgttgatcagt 1891
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>gb|BT025232.1| Drosophila melanogaster FI01005 full insert cDNA
          Length = 3213

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 460  ggtggaggctttggaattgct 480
            |||||||||||||||||||||
Sbjct: 1143 ggtggaggctttggaattgct 1163
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>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     actaatatttgtttgtttgtt 101
              |||||||||||||||||||||
Sbjct: 135208 actaatatttgtttgtttgtt 135188
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 48      cttatcccaccaacccagtccgcctggtc 76
               ||||||||||||| ||| |||||||||||
Sbjct: 3408574 cttatcccaccaagccaatccgcctggtc 3408602
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>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete
             sequence
          Length = 79274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    ctggtcttctactaatatttg 91
             |||||||||||||||||||||
Sbjct: 74061 ctggtcttctactaatatttg 74081
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>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   gccgtcgtacccgcagcagca 195
             |||||||||||||||||||||
Sbjct: 92282 gccgtcgtacccgcagcagca 92262
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>emb|AL590547.3| Human DNA sequence from clone RP11-367A10 on chromosome 1 Contains part
             of the gene for a novel protein (MGC27277), complete
             sequence
          Length = 61119

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    tatttgtttgtttgttgatca 106
             |||||||||||||||||||||
Sbjct: 47653 tatttgtttgtttgttgatca 47673
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>emb|AL583859.9| Human DNA sequence from clone RP11-271F18 on chromosome 10 Contains two
             novel genes, complete sequence
          Length = 167611

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 354   ctgaaactgttaattttgact 374
             |||||||||||||||||||||
Sbjct: 60647 ctgaaactgttaattttgact 60667
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>gb|AC175379.4| Mus musculus chromosome 5, clone wi1-1377G23, complete sequence
          Length = 39440

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 456   tgtgggtggaggctttggaat 476
             |||||||||||||||||||||
Sbjct: 26232 tgtgggtggaggctttggaat 26212
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>emb|BX927102.12| Zebrafish DNA sequence from clone CH211-139C17 in linkage group 12,
             complete sequence
          Length = 166615

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    tttgtttgtttgttgatcagt 108
             |||||||||||||||||||||
Sbjct: 68334 tttgtttgtttgttgatcagt 68354
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>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185790

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 460   ggtggaggctttggaattgct 480
             |||||||||||||||||||||
Sbjct: 24741 ggtggaggctttggaattgct 24721
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>gb|AY122223.1| Drosophila melanogaster RE21150 full insert cDNA
          Length = 3213

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 460  ggtggaggctttggaattgct 480
            |||||||||||||||||||||
Sbjct: 1143 ggtggaggctttggaattgct 1163
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>gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187555

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 460   ggtggaggctttggaattgct 480
             |||||||||||||||||||||
Sbjct: 79346 ggtggaggctttggaattgct 79326
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>ref|NM_139928.3| Drosophila melanogaster Mediator complex subunit 24 CG7999-RA
            (MED24), mRNA
          Length = 3194

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 460  ggtggaggctttggaattgct 480
            |||||||||||||||||||||
Sbjct: 1143 ggtggaggctttggaattgct 1163
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 154      ctcctcccccttccgtcgccggccgtcgt 182
                ||||||||| | |||||||||||||||||
Sbjct: 13122638 ctcctccccgtgccgtcgccggccgtcgt 13122666



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 140     cccgatccatccgactcctccccc 163
               ||||||||| ||||||||||||||
Sbjct: 3854763 cccgatccacccgactcctccccc 3854786
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>gb|AF289998.1|AF289998 Drosophila melanogaster thyroid hormone receptor-associated protein
            TRAP100 (Trap100) mRNA, complete cds
          Length = 3181

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 460  ggtggaggctttggaattgct 480
            |||||||||||||||||||||
Sbjct: 1100 ggtggaggctttggaattgct 1120
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>dbj|AB025627.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNI5
          Length = 21011

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 276   ccctcttcctcggactcgacagctccacccagt 308
             |||||||||||||  |||||||||| |||||||
Sbjct: 10942 ccctcttcctcggcttcgacagctctacccagt 10974
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>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete
              sequence
          Length = 281917

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 460    ggtggaggctttggaattgct 480
              |||||||||||||||||||||
Sbjct: 142721 ggtggaggctttggaattgct 142741
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 154      ctcctcccccttccgtcgccggccgtcgt 182
                ||||||||| | |||||||||||||||||
Sbjct: 13076912 ctcctccccgtgccgtcgccggccgtcgt 13076940



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 140     cccgatccatccgactcctccccc 163
               ||||||||| ||||||||||||||
Sbjct: 3854737 cccgatccacccgactcctccccc 3854760
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178827

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 154    ctcctcccccttccgtcgccggccgtcgt 182
              ||||||||| | |||||||||||||||||
Sbjct: 111841 ctcctccccgtgccgtcgccggccgtcgt 111869
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>ref|NM_001035261.1| Danio rerio supervillin (svil), mRNA
          Length = 6432

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 88   tttgtttgtttgttgatcagt 108
            |||||||||||||||||||||
Sbjct: 5856 tttgtttgtttgttgatcagt 5876
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>gb|AC158487.2| Capitella capitata clone JGIAUTO-1A15, complete sequence
          Length = 35955

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gcactacaaaaccgagggtg 404
             ||||||||||||||||||||
Sbjct: 15379 gcactacaaaaccgagggtg 15398
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>gb|AC024028.10| Homo sapiens BAC clone RP11-151M24 from 7, complete sequence
          Length = 176278

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   ccataatgtgggtggaggct 469
             ||||||||||||||||||||
Sbjct: 94587 ccataatgtgggtggaggct 94568
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>gb|AC002068.1| Homo sapiens BAC clone CTA-242D1 from 7, complete sequence
          Length = 58645

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ctaatatttgtttgtttgtt 101
             ||||||||||||||||||||
Sbjct: 29381 ctaatatttgtttgtttgtt 29400
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>emb|AL391422.17| Human DNA sequence from clone RP11-420L9 on chromosome 6 Contains the
             5' end of a novel gene, a novel pseudogene, the gene for
             XAP-5-like protein (X5L) (DNA segment on chromosome 6
             (unique) 2654 expressed sequence) (D6S2654E) a novel gene
             and CpG islands, complete sequence
          Length = 138221

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 74    gtcttctactaatatttgtttgtttgtt 101
             ||||| ||||||| ||||||||||||||
Sbjct: 82526 gtcttgtactaatttttgtttgtttgtt 82553
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>emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chromosome 1 Contains part of
              the NEGR1 gene for neuronal growth regulator 1 and a novel
              gene, complete sequence
          Length = 180569

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     tctactaatatttgtttgtttgtt 101
              ||||||| ||||||||||||||||
Sbjct: 136235 tctactagtatttgtttgtttgtt 136212
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cgcgcgggcgccgacgaggc 225
              ||||||||||||||||||||
Sbjct: 725479 cgcgcgggcgccgacgaggc 725498
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 207    gcgcgggcgccgacgaggcggaca 230
              ||||||||| ||||||||||||||
Sbjct: 124205 gcgcgggcgacgacgaggcggaca 124182
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>emb|BX511145.13| Zebrafish DNA sequence from clone DKEY-34N18 in linkage group 17,
            complete sequence
          Length = 102544

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   taatatttgtttgtttgttg 102
            ||||||||||||||||||||
Sbjct: 4738 taatatttgtttgtttgttg 4719
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>emb|CR858843.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0510 (from clone DKFZp469D0510)
          Length = 4960

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  acccagtctgtgaaagctac 321
            ||||||||||||||||||||
Sbjct: 1598 acccagtctgtgaaagctac 1617
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>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tttgtttgtttgttgatcag 107
             ||||||||||||||||||||
Sbjct: 52859 tttgtttgtttgttgatcag 52840
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>emb|BX324190.13| Zebrafish DNA sequence from clone CH211-220I18 in linkage group 23,
              complete sequence
          Length = 217060

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ctactaatatttgtttgttt 98
              ||||||||||||||||||||
Sbjct: 165476 ctactaatatttgtttgttt 165457
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>gb|AC004261.3| Arabidopsis thaliana chromosome 2 clone T3K9 map CIC11C08, complete
             sequence
          Length = 91539

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    taatatttgtttgtttgttg 102
             ||||||||||||||||||||
Sbjct: 53791 taatatttgtttgtttgttg 53772
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>gb|AC157279.2| Mus musculus BAC clone RP23-149H21 from chromosome 13, complete
           sequence
          Length = 187493

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ctaatatttgtttgtttgtt 101
           ||||||||||||||||||||
Sbjct: 213 ctaatatttgtttgtttgtt 194
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       atttgtttgtttgttgatca 106
                ||||||||||||||||||||
Sbjct: 28687908 atttgtttgtttgttgatca 28687927
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 88       tttgtttgtttgttgatcag 107
                ||||||||||||||||||||
Sbjct: 40253907 tttgtttgtttgttgatcag 40253888
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>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ctaatatttgtttgtttgtt 101
             ||||||||||||||||||||
Sbjct: 94017 ctaatatttgtttgtttgtt 94036
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>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1793G04
          Length = 156714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     tttgtttgtttgttgatcag 107
              ||||||||||||||||||||
Sbjct: 119685 tttgtttgtttgttgatcag 119666
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 4       cggcatggccgctcccgatctcat 27
               ||||||||||||| ||||||||||
Sbjct: 4874281 cggcatggccgctgccgatctcat 4874304
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    cgcgggcgccgacgaggcgg 227
              ||||||||||||||||||||
Sbjct: 418213 cgcgggcgccgacgaggcgg 418232
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0622F03
          Length = 170064

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atttgtttgtttgttgatca 106
             ||||||||||||||||||||
Sbjct: 88474 atttgtttgtttgttgatca 88493
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>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1425D05, complete sequence
          Length = 66450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tttgtttgtttgttgatcag 107
             ||||||||||||||||||||
Sbjct: 45257 tttgtttgtttgttgatcag 45238
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>dbj|AK100512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O06, full
            insert sequence
          Length = 2301

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   atttgtttgtttgttgatca 106
            ||||||||||||||||||||
Sbjct: 2108 atttgtttgtttgttgatca 2127
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>emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in linkage group 22,
              complete sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     atttgtttgtttgttgatca 106
              ||||||||||||||||||||
Sbjct: 100026 atttgtttgtttgttgatca 100007
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>emb|BX510941.5| Zebrafish DNA sequence from clone DKEY-155D18 in linkage group 20,
              complete sequence
          Length = 183212

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aatatttgtttgtttgttga 103
              ||||||||||||||||||||
Sbjct: 118409 aatatttgtttgtttgttga 118390
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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   cccgatccatccgactcctccccc 163
             ||||||||| ||||||||||||||
Sbjct: 16739 cccgatccacccgactcctccccc 16762
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>emb|BX005273.6| Mouse DNA sequence from clone RP23-302D6 on chromosome X, complete
             sequence
          Length = 15131

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ctaatatttgtttgtttgtt 101
             ||||||||||||||||||||
Sbjct: 12542 ctaatatttgtttgtttgtt 12523
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>emb|AL929328.8| Mouse DNA sequence from clone RP23-332P16 on chromosome X, complete
             sequence
          Length = 74182

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ttctgaaactgttaattttg 371
             ||||||||||||||||||||
Sbjct: 42211 ttctgaaactgttaattttg 42192
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>gb|AC018450.26| Homo sapiens 3 BAC RP11-80H8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191474

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    tgttaattttgactctgagt 380
              ||||||||||||||||||||
Sbjct: 164435 tgttaattttgactctgagt 164416
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>gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome 13, complete sequence
          Length = 208856

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ctaatatttgtttgtttgtt 101
             ||||||||||||||||||||
Sbjct: 20804 ctaatatttgtttgtttgtt 20823


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,665,615
Number of Sequences: 3902068
Number of extensions: 5665615
Number of successful extensions: 691619
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 690842
Number of HSP's gapped (non-prelim): 776
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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