>SGT1_DROME (Q9W032) SGT1 protein homolog ecdysoneless|
          Length = 684

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
 Frame = -3

Query: 283 VADEQPVETH---------PEDQHDGASKIH-INGLDDLEDHLPCMDTFGAARPVDTIGL 134
           +  E+P  TH         PED  D  S++      DD+E +L  +   G+  P+D    
Sbjct: 531 IQPEEPDSTHVRNFLDFVIPEDNWDSTSEMSDYADEDDMESNLNALSGGGSVFPLDRQIQ 590

Query: 133 FYVHTSVEEAEEGARQRSGDGEKSQEPEVEDDPLDGV 23
            Y+     E  + +  +S  G+K   P+ ++D  D +
Sbjct: 591 SYMEQMDRELAQTSVGKSFHGKKKTAPQADEDDFDDI 627

>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)|
          Length = 3036

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 22/81 (27%), Positives = 33/81 (40%)
 Frame = -3

Query: 277  DEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMDTFGAARPVDTIGLFYVHTSVEEAEE 98
            DE+P+     + HD A       LD+ ED              D +GL    T   E ++
Sbjct: 1970 DEEPLNLDWGEDHDSA-------LDEEED--------------DAVGLVMKSTDAREKDK 2008

Query: 97   GARQRSGDGEKSQEPEVEDDP 35
             + Q++ D      P+ EDDP
Sbjct: 2009 QSDQKASDPNMLLTPQEEDDP 2029

>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor|
          Length = 932

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 17/136 (12%)
 Frame = -3

Query: 361 LLQSEHPEQRRSLQSPVGSGRQIVGRVADEQPVETHPEDQHDGASKIHINGL-DDLEDHL 185
           + + +  E     +S  GSG +  G V  E+  E   ED  DGAS     G  ++  +  
Sbjct: 299 MTEEDADEASSEEESGDGSGSEEEGGVPSEEESE---EDSGDGASSEEAEGASEEATEPQ 355

Query: 184 PCMDTFGAARPVDTIGLFYVHTSVE-----EAEE----------GARQRSGDGEKSQEPE 50
              +   A  P +   L     S E     EAEE          G  Q  GD ++++EP+
Sbjct: 356 EAGEPQEAREPQEGGDLQEAEESQEGGDPQEAEEPQEGGAPQEGGEPQEGGDPQEAREPQ 415

Query: 49  VEDDPLDGVSM-EGTG 5
              +P +G  + E TG
Sbjct: 416 EAREPQEGAELPEATG 431

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
 Frame = -3

Query: 322 QSPVGSGRQIVGRVADEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMDTFGAARP--- 152
           +SPV   R+   R+  EQP E    D       + + G  ++   LP  +  G A     
Sbjct: 165 ESPVRRTRKAAKRLGSEQPEENLAADD-----PLPMEGGGEIV--LPIAEIDGMAEQENE 217

Query: 151 --VDTIGLFYVHTSVEEAEEGARQRSGDGEKSQEPEVEDDPLDGVSME 14
             ++ IG        EE EEGA +    GEK  E E EDD  +  S E
Sbjct: 218 DLIEKIGR-------EEEEEGAEEDEQSGEKDPEEE-EDDSSNAESSE 257

>IF2_STRMU (Q8DVP9) Translation initiation factor IF-2|
          Length = 916

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +1

Query: 235 RHADLRDGSLRAVHQQRVQRSAFRIRPGSARIVAVRDVRSEGEAEVDEDHVPGRAQDQGW 414
           + A  ++GS+ A  +    + A R RP +    A R+ R++ EAE  +++   R Q++G 
Sbjct: 67  KEAKAQEGSVAAEPKAAATKPAGRPRPQNRNFKAEREARAKAEAERRQNNGERRNQNKGQ 126

Query: 415 ARHRDD 432
              + D
Sbjct: 127 NNRQKD 132

>GPMI_HALSA (Q9HNY7) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 508

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 14/103 (13%)
 Frame = -3

Query: 301 RQIVGRVADEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMDTFGAARPVDTIGLF--- 131
           RQ+   +AD  P +   +        + +  + + ++   C   F AA P DT+G     
Sbjct: 259 RQLTRLLADIHPADWDADGIETNPPAVPVVTMTEYDETFDCPVAFPAAEPTDTLGAVLAA 318

Query: 130 YVHTSVEEAE-----------EGARQRSGDGEKSQEPEVEDDP 35
           + HT +  AE            G R+ + DGE     +  D P
Sbjct: 319 HDHTQLRVAESEKYAHVTYFLNGGREVAFDGETRTIVDSPDVP 361

>PHF20_HUMAN (Q9BVI0) PHD finger protein 20 (Hepatocellular carcinoma-associated|
           antigen 58) (Glioma-expressed antigen 2) (Transcription
           factor TZP) (Novel zinc finger protein)
          Length = 1012

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/95 (24%), Positives = 37/95 (38%)
 Frame = -3

Query: 352 SEHPEQRRSLQSPVGSGRQIVGRVADEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMD 173
           ++HP  RR +   VG+  +   R+ +  P      D  +G   IH    +   D   C D
Sbjct: 2   TKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWD 61

Query: 172 TFGAARPVDTIGLFYVHTSVEEAEEGARQRSGDGE 68
           +    RP++ I L          +EG  +  G  E
Sbjct: 62  S-PYLRPLEKIQL---------RKEGLHEEDGSSE 86

>M6PBP_PIG (Q5BLZ2) Mannose-6-phosphate receptor-binding protein 1 (Cargo|
           selection protein TIP47)
          Length = 439

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -3

Query: 283 VADEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMDTFGAARPVDTIGLFYVHTSVEEA 104
           V+  QP+ +  E Q   AS+    GLD LE++LP +         DT  L  V + V EA
Sbjct: 76  VSGAQPILSKLEPQLTSASEYAHRGLDKLEENLPILQQPSEKVLADTKEL--VSSKVSEA 133

Query: 103 EE 98
            E
Sbjct: 134 RE 135

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -3

Query: 388 GRDLHPLRPLLQSEHPEQRRSLQSPVGSGRQIVGRVADEQPVETHPEDQH 239
           G   HP RP   + HP+Q   LQ P              Q ++ HP  QH
Sbjct: 390 GLPQHPQRPQHPAPHPQQHSQLQPPHSQ------HPPPHQHIQHHPNHQH 433

>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +1

Query: 265 RAVHQQRVQRSAFRIRPGSARIVAVRDVRSEGEAEVDEDHVPGRAQDQGWARHRDDPAGE 444
           R + Q + + S+    P     V V    +  E + D++  PG  +D   A HR D  GE
Sbjct: 667 RVLPQTKAESSSDEEEPAELPAVTVTPAPAP-EDKGDQEEDPGCQEDVDEAEHRGDMTGE 725

Query: 445 DVRAEQDGE 471
           +   E + E
Sbjct: 726 EGERETEAE 734

>PHF20_MOUSE (Q8BLG0) PHD finger protein 20 (Hepatocellular carcinoma-associated|
           antigen 58 homolog)
          Length = 1010

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 23/95 (24%), Positives = 36/95 (37%)
 Frame = -3

Query: 352 SEHPEQRRSLQSPVGSGRQIVGRVADEQPVETHPEDQHDGASKIHINGLDDLEDHLPCMD 173
           ++HP  RR +   VG+  +   R+ +  P      D  +G   IH    +   D   C D
Sbjct: 2   TKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVLIHFKRWNHRYDEWFCWD 61

Query: 172 TFGAARPVDTIGLFYVHTSVEEAEEGARQRSGDGE 68
           +    RP++ I L          +EG     G  E
Sbjct: 62  S-PYLRPLEKIQL---------RKEGLHDEDGSSE 86

>VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21|
          Length = 985

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = +1

Query: 262 LRAVHQQRVQRSAFRIRPGSARIVAV------RDVRSEGEAEVDEDHVPGRAQDQGWARH 423
           L ++ + RV       RP   R           +V +EGEA+ D +   G A  +G A  
Sbjct: 139 LESIDEMRVNEKERENRPEDPRETVNINQDIGEEVDAEGEADADGEPENGEADAEGEADA 198

Query: 424 RDDPAGEDV 450
              P G+DV
Sbjct: 199 DGGPVGDDV 207

>RL4_HALSA (Q9HPD3) 50S ribosomal protein L4P|
          Length = 250

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 205 DDLEDHLPCMDTFGAARPVDTIGLFYVHTSVEEAEEGARQRSGD----GEKSQEP 53
           DD ED +   D       V  +    VH  +E A+EG   R+G     G K QEP
Sbjct: 143 DDFEDLVKTQDV------VSLLEALGVHADIERADEGRTVRAGQGTLRGRKYQEP 191

>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 343 DVRSEGEAEVDEDHVPGRAQDQGWARHRDDPAGEDVRAEQDGED 474
           D   EGE E DE+   G    +      DD A ED   E+DG+D
Sbjct: 224 DEDEEGEEEEDEEEEEGDEDGETDVYEEDDEA-EDEEDEEDGDD 266

>SKI_HUMAN (P12755) Ski oncogene (C-ski)|
          Length = 728

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 256 GSLRAVHQQRVQRSAFRIRPGSARIVAVR-DVRSEGEAEVDEDHVPGRAQDQGWARHRDD 432
           G LRA +  +++    +++   A    +R D+  E EA    + V    Q+Q W R R +
Sbjct: 657 GRLRAKYSAQIEDLQVKLQHAEADREQLRADLLREREAREHLEKVVKELQEQLWPRARPE 716

Query: 433 PAGEDVRAE 459
            AG +  AE
Sbjct: 717 AAGSEGAAE 725

>ZN131_PONPY (Q5RAU9) Zinc finger protein 131|
          Length = 589

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = -3

Query: 466 HLAPLEHLXXXXXXXDVPNLGLELVQGRDLHPLRPLLQSEHPEQRRSLQSPVGSGRQIVG 287
           H+ PL  +        V  +  +L+QG  +H       SE PEQ       V      VG
Sbjct: 445 HVLPLLQVQVDSAQVTVEQVHPDLLQGSQVHDSH---MSELPEQ-------VQVSYLEVG 494

Query: 286 RVADEQPVETHPEDQH 239
           R+  E+  E H E+ H
Sbjct: 495 RIQTEEGTEVHVEELH 510


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,244,111
Number of Sequences: 219361
Number of extensions: 1544070
Number of successful extensions: 5823
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5811
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)