ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191091.1| Oryza sativa (japonica cultivar-group), predic... 337 1e-89
2dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 1e-89
3dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 1e-89
4gb|AY111857.1| Zea mays CL19040_1 mRNA sequence 234 1e-58
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 172 4e-40
6dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 172 4e-40
7dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
8dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
10gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 105 9e-20
11gb|AE009371.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.1
12gb|AE008243.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.1
13gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, c... 42 1.1
14gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 4.2
15gb|DQ214134.1| Taeniopygia guttata clone 0062P0001C05 leucine-ri... 40 4.2
16gb|AY596974.1| Mus musculus tuberin-like protein 1 isoform 3 (Ga... 40 4.2
17gb|AY596973.1| Mus musculus tuberin-like protein 1 isoform 1 (Ga... 40 4.2
18gb|AY596972.1| Mus musculus tuberin-like protein 1 isoform 2 (Ga... 40 4.2
19gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome... 40 4.2
20ref|XM_448732.1| Candida glabrata CBS138, CAGL0K11880g partial mRNA 40 4.2
21ref|XM_547775.2| PREDICTED: Canis familiaris similar to GTPase a... 40 4.2
22gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, comp... 40 4.2
23gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Canc... 40 4.2
24emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 4.2
25gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosom... 40 4.2
26gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.2
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.2
28dbj|AK153664.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 4.2
29gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 4.2
30dbj|AK046680.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 4.2
31dbj|AK042116.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 4.2
32dbj|AK082010.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.2
33gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 4.2
34gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.2
35ref|XM_578542.1| PREDICTED: Rattus norvegicus GTPase activating ... 40 4.2
36dbj|AK129236.1| Mus musculus mRNA for mKIAA0884 protein 40 4.2
37gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome... 40 4.2
38ref|NM_019994.4| Mus musculus GTPase activating RANGAP domain-li... 40 4.2
39ref|NM_001003719.1| Mus musculus GTPase activating RANGAP domain... 40 4.2 
>ref|NM_191091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2475

 Score =  337 bits (170), Expect = 1e-89
 Identities = 285/322 (88%), Gaps = 1/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtcgctgtatggaggcgctggtgacggcggcgcagggaggctccacggacacctcggt 60
           ||||||||| |||||||||||||  |||||||||||||||||| ||  ||  || |||||
Sbjct: 7   aggtcgctg-atggaggcgctggctacggcggcgcagggaggcaccgtggggacgtcggt 65

                                                                       
Query: 61  gctctccatgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcat 120
             ||  ||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 66  tttcgacatgctcaagtacgccgtgctgcccattgccaaggtgtttaccgtctgtttcat 125

                                                                       
Query: 121 gggcttcctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttct 180
           ||| |||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 126 ggggttcctcatggcctctaagtatgtcaatatcctccagccgaacggccgcaagcttct 185

                                                                       
Query: 181 caacgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggcagcgc 240
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 186 caatgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggtagagc 245

                                                                       
Query: 241 gatcactctcgagaagttggtgcagtggtggtatattccagtaaatattgttgtaggtgc 300
            |||||  |||| ||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct: 246 aatcacaatcgaaaagatgctgcaatggtggtatattccagtaaatattgttgtaggtgc 305

                                 
Query: 301 cgtgtctggatccttgattggc 322
            ||||| || || |||||||||
Sbjct: 306 agtgtcaggctctttgattggc 327
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>dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full
           insert sequence
          Length = 1930

 Score =  337 bits (170), Expect = 1e-89
 Identities = 285/322 (88%), Gaps = 1/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtcgctgtatggaggcgctggtgacggcggcgcagggaggctccacggacacctcggt 60
           ||||||||| |||||||||||||  |||||||||||||||||| ||  ||  || |||||
Sbjct: 207 aggtcgctg-atggaggcgctggctacggcggcgcagggaggcaccgtggggacgtcggt 265

                                                                       
Query: 61  gctctccatgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcat 120
             ||  ||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 266 tttcgacatgctcaagtacgccgtgctgcccattgccaaggtgtttaccgtctgtttcat 325

                                                                       
Query: 121 gggcttcctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttct 180
           ||| |||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 326 ggggttcctcatggcctctaagtatgtcaatatcctccagccgaacggccgcaagcttct 385

                                                                       
Query: 181 caacgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggcagcgc 240
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 386 caatgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggtagagc 445

                                                                       
Query: 241 gatcactctcgagaagttggtgcagtggtggtatattccagtaaatattgttgtaggtgc 300
            |||||  |||| ||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct: 446 aatcacaatcgaaaagatgctgcaatggtggtatattccagtaaatattgttgtaggtgc 505

                                 
Query: 301 cgtgtctggatccttgattggc 322
            ||||| || || |||||||||
Sbjct: 506 agtgtcaggctctttgattggc 527
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>dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034N13, full
           insert sequence
          Length = 1975

 Score =  337 bits (170), Expect = 1e-89
 Identities = 285/322 (88%), Gaps = 1/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtcgctgtatggaggcgctggtgacggcggcgcagggaggctccacggacacctcggt 60
           ||||||||| |||||||||||||  |||||||||||||||||| ||  ||  || |||||
Sbjct: 183 aggtcgctg-atggaggcgctggctacggcggcgcagggaggcaccgtggggacgtcggt 241

                                                                       
Query: 61  gctctccatgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcat 120
             ||  ||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 242 tttcgacatgctcaagtacgccgtgctgcccattgccaaggtgtttaccgtctgtttcat 301

                                                                       
Query: 121 gggcttcctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttct 180
           ||| |||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 302 ggggttcctcatggcctctaagtatgtcaatatcctccagccgaacggccgcaagcttct 361

                                                                       
Query: 181 caacgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggcagcgc 240
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 362 caatgggcttgtgttctcgcttctacttccttgccttatattttcccaactgggtagagc 421

                                                                       
Query: 241 gatcactctcgagaagttggtgcagtggtggtatattccagtaaatattgttgtaggtgc 300
            |||||  |||| ||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct: 422 aatcacaatcgaaaagatgctgcaatggtggtatattccagtaaatattgttgtaggtgc 481

                                 
Query: 301 cgtgtctggatccttgattggc 322
            ||||| || || |||||||||
Sbjct: 482 agtgtcaggctctttgattggc 503
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>gb|AY111857.1| Zea mays CL19040_1 mRNA sequence
          Length = 547

 Score =  234 bits (118), Expect = 1e-58
 Identities = 172/190 (90%)
 Strand = Plus / Plus

                                                                       
Query: 67  catgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcatgggctt 126
           |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 351 catgctcaagtacgccgtgctgcccatcgccaaggtgttcactgtctgcttcatggggtt 410

                                                                       
Query: 127 cctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttctcaacgg 186
           ||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 411 ccttatggcctccaagtacgtcaacattctccagcccaacggccgcaagcttctcaatgg 470

                                                                       
Query: 187 gcttgtgttctcgcttctacttccttgccttatattttcccaactgggcagcgcgatcac 246
           ||||| ||| || ||||| ||||| |||||||||||||| ||| |||| || || |||||
Sbjct: 471 gcttgggttttcccttctgcttccatgccttatattttcgcaattgggtagagcaatcac 530

                     
Query: 247 tctcgagaag 256
           | ||||||||
Sbjct: 531 tatcgagaag 540
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  172 bits (87), Expect = 4e-40
 Identities = 160/183 (87%), Gaps = 1/183 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aggtcgctgtatggaggcgctggtgacggcggcgcagggaggctccacggacacctcggt 60
                ||||||||| |||||||||||||  |||||||||||||||||| ||  ||  || |||||
Sbjct: 34828696 aggtcgctg-atggaggcgctggctacggcggcgcagggaggcaccgtggggacgtcggt 34828754

                                                                            
Query: 61       gctctccatgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcat 120
                  ||  ||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 34828755 tttcgacatgctcaagtacgccgtgctgcccattgccaaggtgtttaccgtctgtttcat 34828814

                                                                            
Query: 121      gggcttcctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttct 180
                ||| |||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 34828815 ggggttcctcatggcctctaagtatgtcaatatcctccagccgaacggccgcaagcttct 34828874

                   
Query: 181      caa 183
                |||
Sbjct: 34828875 caa 34828877



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                                
Query: 187      gcttgtgttctcgcttctacttccttgccttatattttcccaactggg 234
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34829063 gcttgtgttctcgcttctacttccttgccttatattttcccaactggg 34829110



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 267      ggtggtatattccagtaaatattgttgtaggtgccgtgtctggatccttgattggc 322
                |||||||||||||||||||||||||||||||||| ||||| || || |||||||||
Sbjct: 34829595 ggtggtatattccagtaaatattgttgtaggtgcagtgtcaggctctttgattggc 34829650
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score =  172 bits (87), Expect = 4e-40
 Identities = 160/183 (87%), Gaps = 1/183 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aggtcgctgtatggaggcgctggtgacggcggcgcagggaggctccacggacacctcggt 60
             ||||||||| |||||||||||||  |||||||||||||||||| ||  ||  || |||||
Sbjct: 87868 aggtcgctg-atggaggcgctggctacggcggcgcagggaggcaccgtggggacgtcggt 87926

                                                                         
Query: 61    gctctccatgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcat 120
               ||  ||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 87927 tttcgacatgctcaagtacgccgtgctgcccattgccaaggtgtttaccgtctgtttcat 87986

                                                                         
Query: 121   gggcttcctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttct 180
             ||| |||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 87987 ggggttcctcatggcctctaagtatgtcaatatcctccagccgaacggccgcaagcttct 88046

                
Query: 181   caa 183
             |||
Sbjct: 88047 caa 88049



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                             
Query: 187   gcttgtgttctcgcttctacttccttgccttatattttcccaactggg 234
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88235 gcttgtgttctcgcttctacttccttgccttatattttcccaactggg 88282



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 267   ggtggtatattccagtaaatattgttgtaggtgccgtgtctggatccttgattggc 322
             |||||||||||||||||||||||||||||||||| ||||| || || |||||||||
Sbjct: 88767 ggtggtatattccagtaaatattgttgtaggtgcagtgtcaggctctttgattggc 88822
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>dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H11, full
           insert sequence
          Length = 1737

 Score =  137 bits (69), Expect = 2e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                       
Query: 67  catgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcatgggctt 126
           |||| ||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||
Sbjct: 244 catgttcaggtacgccgtgctgcccatcgccaaggtgttcgtcgtctgcttcatggggtt 303

                                                                       
Query: 127 cctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttctcaacgg 186
           |||||||||  |||||  ||||  | | ||| |||||| |||||||||||||||||| | 
Sbjct: 304 cctcatggcgtccaagcgcgtcggcgtgctcaagcccagcggccgcaagcttctcaatgc 363

                                                
Query: 187 gcttgtgttctcgcttctacttccttgccttatattt 223
           |||||||||||| || || ||||||||||| ||||||
Sbjct: 364 gcttgtgttctctctgctccttccttgcctaatattt 400
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>dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B08, full
           insert sequence
          Length = 1705

 Score =  137 bits (69), Expect = 2e-29
 Identities = 135/157 (85%)
 Strand = Plus / Plus

                                                                       
Query: 67  catgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcatgggctt 126
           |||| ||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||
Sbjct: 208 catgttcaggtacgccgtgctgcccatcgccaaggtgttcgtcgtctgcttcatggggtt 267

                                                                       
Query: 127 cctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttctcaacgg 186
           |||||||||  |||||  ||||  | | ||| |||||| |||||||||||||||||| | 
Sbjct: 268 cctcatggcgtccaagcgcgtcggcgtgctcaagcccagcggccgcaagcttctcaatgc 327

                                                
Query: 187 gcttgtgttctcgcttctacttccttgccttatattt 223
           |||||||||||| || || ||||||||||| ||||||
Sbjct: 328 gcttgtgttctctctgctccttccttgcctaatattt 364
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 9e-20
 Identities = 101/117 (86%)
 Strand = Plus / Minus

                                                                            
Query: 67       catgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcatgggctt 126
                |||| ||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||
Sbjct: 23555184 catgttcaggtacgccgtgctgcccatcgccaaggtgttcgtcgtctgcttcatggggtt 23555125

                                                                         
Query: 127      cctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttctcaa 183
                |||||||||  |||||  ||||  | | ||| |||||| ||||||||||||||||||
Sbjct: 23555124 cctcatggcgtccaagcgcgtcggcgtgctcaagcccagcggccgcaagcttctcaa 23555068



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 187      gcttgtgttctcgcttctacttccttgccttatattt 223
                |||||||||||| || || ||||||||||| ||||||
Sbjct: 23554910 gcttgtgttctctctgctccttccttgcctaatattt 23554874
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score =  105 bits (53), Expect = 9e-20
 Identities = 101/117 (86%)
 Strand = Plus / Minus

                                                                         
Query: 67    catgctcaagtacgccgtgctgcccatcgccaaggtcttcaccgtctgcttcatgggctt 126
             |||| ||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||
Sbjct: 92356 catgttcaggtacgccgtgctgcccatcgccaaggtgttcgtcgtctgcttcatggggtt 92297

                                                                      
Query: 127   cctcatggccaccaagtacgtcaacatcctccagcccaacggccgcaagcttctcaa 183
             |||||||||  |||||  ||||  | | ||| |||||| ||||||||||||||||||
Sbjct: 92296 cctcatggcgtccaagcgcgtcggcgtgctcaagcccagcggccgcaagcttctcaa 92240



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 187   gcttgtgttctcgcttctacttccttgccttatattt 223
             |||||||||||| || || ||||||||||| ||||||
Sbjct: 92082 gcttgtgttctctctgctccttccttgcctaatattt 92046
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>gb|AE009371.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 141 of
            187 of the complete sequence
          Length = 10837

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   atcgccaaggtcttcaccgtc 112
            |||||||||||||||||||||
Sbjct: 3310 atcgccaaggtcttcaccgtc 3330
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>gb|AE008243.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 47 of
            187 of the complete sequence
          Length = 11874

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   atcgccaaggtcttcaccgtc 112
            |||||||||||||||||||||
Sbjct: 7529 atcgccaaggtcttcaccgtc 7509
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>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence
          Length = 138379

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   tcaacatcctccagcccaacg 167
             |||||||||||||||||||||
Sbjct: 48829 tcaacatcctccagcccaacg 48849
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 16      ggcgctggtgacggcggcgcagggaggc 43
               |||||||| ||||||||||| |||||||
Sbjct: 3737379 ggcgctggcgacggcggcgctgggaggc 3737352
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>gb|DQ214134.1| Taeniopygia guttata clone 0062P0001C05 leucine-rich repeat protein
           (LRP15)-like mRNA, complete sequence
          Length = 1362

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 catgggcttcctcatggcca 137
           ||||||||||||||||||||
Sbjct: 128 catgggcttcctcatggcca 109
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>gb|AY596974.1| Mus musculus tuberin-like protein 1 isoform 3 (Garnl1) mRNA, complete
            cds, alternatively spliced
          Length = 7891

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1144 cttgccttatattttcccaa 1163
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>gb|AY596973.1| Mus musculus tuberin-like protein 1 isoform 1 (Garnl1) mRNA, complete
            cds, alternatively spliced
          Length = 7919

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1144 cttgccttatattttcccaa 1163
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>gb|AY596972.1| Mus musculus tuberin-like protein 1 isoform 2 (Garnl1) mRNA, complete
            cds
          Length = 7922

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1144 cttgccttatattttcccaa 1163
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>gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome 12, complete sequence
          Length = 187364

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   cttgccttatattttcccaa 229
             ||||||||||||||||||||
Sbjct: 88956 cttgccttatattttcccaa 88975
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>ref|XM_448732.1| Candida glabrata CBS138, CAGL0K11880g partial mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  aggtcttcaccgtctgcttc 118
           ||||||||||||||||||||
Sbjct: 446 aggtcttcaccgtctgcttc 465
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>ref|XM_547775.2| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP
           domain-like 1 isoform 1 (LOC490653), mRNA
          Length = 4494

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 cttgccttatattttcccaa 229
           ||||||||||||||||||||
Sbjct: 741 cttgccttatattttcccaa 760
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>gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, complete sequence
          Length = 74595

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   cgtcaacatcctccagccca 164
             ||||||||||||||||||||
Sbjct: 18871 cgtcaacatcctccagccca 18890
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>gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 190580

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   ggtgcagtggtggtatattccagt 282
             ||||||| ||||||||||||||||
Sbjct: 27103 ggtgcagaggtggtatattccagt 27126
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      aggtcttcaccgtctgcttc 118
               ||||||||||||||||||||
Sbjct: 1146501 aggtcttcaccgtctgcttc 1146520
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>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete sequence
          Length = 172362

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    acttccttgccttatatttt 224
              ||||||||||||||||||||
Sbjct: 112251 acttccttgccttatatttt 112232
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 156     tccagcccaacggccgcaag 175
               ||||||||||||||||||||
Sbjct: 3230656 tccagcccaacggccgcaag 3230637
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      catcgccaaggtcttcaccg 110
               ||||||||||||||||||||
Sbjct: 2460653 catcgccaaggtcttcaccg 2460672
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>dbj|AK153664.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630036G21 product:GTPase activating
            RANGAP domain-like 1, full insert sequence
          Length = 1745

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1056 cttgccttatattttcccaa 1075
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     tcttcaccgtctgcttcatg 121
               ||||||||||||||||||||
Sbjct: 5880242 tcttcaccgtctgcttcatg 5880223
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>dbj|AK046680.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430308D21 product:hypothetical
            protein, full insert sequence
          Length = 3424

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1145 cttgccttatattttcccaa 1164
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>dbj|AK042116.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630059L24 product:CDNA FLJ12926 FIS,
            CLONE NT2RP2004732, WEAKLY SIMILAR TO NEUROFILAMENT
            TRIPLET M PROTEIN homolog [Homo sapiens], full insert
            sequence
          Length = 3584

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1059 cttgccttatattttcccaa 1078
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>dbj|AK082010.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130094C19 product:unclassifiable, full
            insert sequence
          Length = 3940

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1691 cttgccttatattttcccaa 1710
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 16      ggcgctggtgacggcggcgcagggaggc 43
               |||||||| ||||||||||| |||||||
Sbjct: 4037838 ggcgctggcgacggcggcgctgggaggc 4037865
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 12      tggaggcgctggtgacggcggcgc 35
               |||||||||||||| |||||||||
Sbjct: 3858284 tggaggcgctggtggcggcggcgc 3858307
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>ref|XM_578542.1| PREDICTED: Rattus norvegicus GTPase activating RANGAP domain-like 1
            (Garnl1), mRNA
          Length = 7791

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1512 cttgccttatattttcccaa 1531
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>dbj|AK129236.1| Mus musculus mRNA for mKIAA0884 protein
          Length = 3472

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 cttgccttatattttcccaa 229
           ||||||||||||||||||||
Sbjct: 947 cttgccttatattttcccaa 966
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>gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome 13, complete sequence
          Length = 219890

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 242    atcactctcgagaagttggtgcag 265
              |||||||||||||| |||||||||
Sbjct: 102755 atcactctcgagaacttggtgcag 102778
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>ref|NM_019994.4| Mus musculus GTPase activating RANGAP domain-like 1 (Garnl1),
            transcript variant 2, mRNA
          Length = 7922

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1144 cttgccttatattttcccaa 1163
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>ref|NM_001003719.1| Mus musculus GTPase activating RANGAP domain-like 1 (Garnl1),
            transcript variant 3, mRNA
          Length = 7891

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  cttgccttatattttcccaa 229
            ||||||||||||||||||||
Sbjct: 1144 cttgccttatattttcccaa 1163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,603,903
Number of Sequences: 3902068
Number of extensions: 2603903
Number of successful extensions: 45878
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45627
Number of HSP's gapped (non-prelim): 247
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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