ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK061428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
3dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
4dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
5gb|AY112202.1| Zea mays CL17047_1 mRNA sequence 84 7e-13
6gb|AY023548.1| Oryza sativa microsatellite MRG5873 containing (T... 68 4e-08
7ref|NM_180884.1| Arabidopsis thaliana binding / nucleic acid bin... 58 4e-05
8ref|NM_125233.3| Arabidopsis thaliana binding / nucleic acid bin... 58 4e-05
9gb|AF367294.1|AF367294 Arabidopsis thaliana AT5g58470/mqj2_60 mR... 58 4e-05
10dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.009
11gb|AC117679.8| Mus musculus chromosome 9, clone RP23-435I22, com... 42 2.3
12gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 42 2.3
13dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 42 2.3
14gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosom... 42 2.3
15gb|AF116526.1|AF116526 Mus musculus K-Cl cotransporter (KCC1) ge... 42 2.3
16emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on ch... 42 2.3
17gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, comple... 42 2.3
18gb|AC155904.1| Loxodonta africana, clone Loxodonta africana-4339... 42 2.3
19ref|NM_178779.2| Mus musculus ring finger protein 152 (Rnf152), ... 40 8.9
20gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 8.9
21gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome ... 40 8.9
22ref|XM_537586.2| PREDICTED: Canis familiaris similar to fetal Al... 40 8.9
23emb|AL032631.1|CEY106G6H Caenorhabditis elegans YAC Y106G6H, com... 40 8.9
24gb|DQ463275.1| Uncultured bacterium clone ES3-56 16S ribosomal R... 40 8.9
25gb|AC162907.5| Mus musculus BAC clone RP24-286I24 from chromosom... 40 8.9
26emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, co... 40 8.9
27ref|XM_690763.1| PREDICTED: Danio rerio similar to Kelch repeat ... 40 8.9
28dbj|AK081452.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 8.9
29gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell ... 40 8.9
30dbj|AK044638.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.9
31ref|XM_220830.3| PREDICTED: Rattus norvegicus myeloperoxidase (M... 40 8.9
32dbj|AP001685.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.9
33gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone... 40 8.9
34emb|AL672146.9| Mouse DNA sequence from clone RP23-390P18 on chr... 40 8.9
35emb|AL935284.13| Zebrafish DNA sequence from clone CH211-271N3, ... 40 8.9
36dbj|AP000966.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.9 
>dbj|AK061428.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H02, full
           insert sequence
          Length = 1041

 Score =  272 bits (137), Expect = 1e-69
 Identities = 188/205 (91%)
 Strand = Plus / Plus

                                                                       
Query: 449 caaaggttaagcagtgtgatgcaaactgtgatgattcctgcgacaatgcaaggatttaca 508
           ||||||||||||||||||||||||||||||||||  | || || |||||||| |||||||
Sbjct: 390 caaaggttaagcagtgtgatgcaaactgtgatgagacttgtgataatgcaagaatttaca 449

                                                                       
Query: 509 tctcaaacctgccccctgatgtgactgttgaggaactgcaagagctttttggaggaattg 568
           |||| ||| | || ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 450 tctccaacttacctcctgatgtgactgttgaggaactgcaagaactatttggaggaatcg 509

                                                                       
Query: 569 gccaggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctggaacataa 628
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 510 gccaggttggaaggatcaagcagaaacgtggctacaaagaccagtggccctggaacataa 569

                                    
Query: 629 aaatctacactgatgattctggaaa 653
           | ||||| |||||||| ||||||||
Sbjct: 570 agatctatactgatgactctggaaa 594



 Score =  151 bits (76), Expect = 3e-33
 Identities = 257/316 (81%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                       
Query: 98  gctatggacaggctccccctaaaggccctccatcctatggcggtcctccaggtgattacg 157
           |||||||||| | ||| ||| |||| ||||| |||||||| || |||   ||||| || |
Sbjct: 12  gctatggacaagttcctcctcaaggtcctccttcctatggtgggcctggtggtgactatg 71

                                                                       
Query: 158 caccgcccccaagttcctatggaggcaacaatgtgtacagttcagagtctgcagtgccac 217
           || | || ||||| |||||||||||||| ||||  |||| |||||| |||||||||||||
Sbjct: 72  cagcacctccaagctcctatggaggcaataatgcatacaattcagattctgcagtgccac 131

                                                                       
Query: 218 cccctaacagctatggcagcggtcgaggctcttacccaccaagctatggtgccccacctc 277
           | ||||  ||||||||  | |||| ||| || || |||||||| |||||||| |||||||
Sbjct: 132 ctcctagtagctatggtggtggtccaggttcatatccaccaagttatggtgcaccacctc 191

                                                                       
Query: 278 cgaac---ccatatagtggcggtgccccaggggggcaaggaggcctgccacctacatatg 334
           |||||   |||||||| || ||||| ||||| || |||||  |||| || ||| ||||||
Sbjct: 192 cgaacccgccatatagcggtggtgctccaggtggccaaggtagcctacctccttcatatg 251

                                                                       
Query: 335 atggtggttatggtgctcggtctgtgcctgggggtggaggcgcaggtggtgctccaccac 394
           ||||||| ||||||| |||| || ||||||||||||||||| |   |||||| || ||||
Sbjct: 252 atggtgggtatggtggtcggcctatgcctgggggtggaggccc---tggtgcacctccac 308

                           
Query: 395 cttatcaaggtggtgg 410
           | ||||| ||||||||
Sbjct: 309 cctatcatggtggtgg 324
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 3e-33
 Identities = 257/316 (81%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                           
Query: 98      gctatggacaggctccccctaaaggccctccatcctatggcggtcctccaggtgattacg 157
               |||||||||| | ||| ||| |||| ||||| |||||||| || |||   ||||| || |
Sbjct: 3323246 gctatggacaagttcctcctcaaggtcctccttcctatggtgggcctggtggtgactatg 3323305

                                                                           
Query: 158     caccgcccccaagttcctatggaggcaacaatgtgtacagttcagagtctgcagtgccac 217
               || | || ||||| |||||||||||||| ||||  |||| |||||| |||||||||||||
Sbjct: 3323306 cagcacctccaagctcctatggaggcaataatgcatacaattcagattctgcagtgccac 3323365

                                                                           
Query: 218     cccctaacagctatggcagcggtcgaggctcttacccaccaagctatggtgccccacctc 277
               | ||||  ||||||||  | |||| ||| || || |||||||| |||||||| |||||||
Sbjct: 3323366 ctcctagtagctatggtggtggtccaggttcatatccaccaagttatggtgcaccacctc 3323425

                                                                           
Query: 278     cgaac---ccatatagtggcggtgccccaggggggcaaggaggcctgccacctacatatg 334
               |||||   |||||||| || ||||| ||||| || |||||  |||| || ||| ||||||
Sbjct: 3323426 cgaacccgccatatagcggtggtgctccaggtggccaaggtagcctacctccttcatatg 3323485

                                                                           
Query: 335     atggtggttatggtgctcggtctgtgcctgggggtggaggcgcaggtggtgctccaccac 394
               ||||||| ||||||| |||| || ||||||||||||||||| |   |||||| || ||||
Sbjct: 3323486 atggtgggtatggtggtcggcctatgcctgggggtggaggccc---tggtgcacctccac 3323542

                               
Query: 395     cttatcaaggtggtgg 410
               | ||||| ||||||||
Sbjct: 3323543 cctatcatggtggtgg 3323558



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                           
Query: 449     caaaggttaagcagtgtgatgcaaactgtgatgattcctgcgacaatgcaaggatttaca 508
               ||||||||||||||||||||||||||||||||||  | || || |||||||| |||||||
Sbjct: 3323624 caaaggttaagcagtgtgatgcaaactgtgatgagacttgtgataatgcaagaatttaca 3323683

                                                                           
Query: 509     tctcaaacctgccccctgatgtgactgttgaggaactgcaagagctttttggaggaattg 568
               |||| ||| | || ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 3323684 tctccaacttacctcctgatgtgactgttgaggaactgcaagaactatttggaggaatcg 3323743

                      
Query: 569     gccaggt 575
               |||||||
Sbjct: 3323744 gccaggt 3323750



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                           
Query: 572     aggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctggaacataaaaa 631
               ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 3324502 aggttggaaggatcaagcagaaacgtggctacaaagaccagtggccctggaacataaaga 3324561

                                     
Query: 632     tctacactgatgattctggaaa 653
               |||| |||||||| ||||||||
Sbjct: 3324562 tctatactgatgactctggaaa 3324583



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 61/69 (88%), Gaps = 3/69 (4%)
 Strand = Plus / Plus

                                                                           
Query: 19      cgtggttttgatgaccaccgtggtgggagcggtggcagttatgggggaagaggccaagag 78
               ||||| |||||||||||||||||||| || |||||   |||||||||||||| ||||| |
Sbjct: 3323149 cgtggatttgatgaccaccgtggtggcaggggtgg---ttatgggggaagagaccaaggg 3323205

                        
Query: 79      aacaaccaa 87
               |||||||||
Sbjct: 3323206 aacaaccaa 3323214
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0701D05
          Length = 172161

 Score =  151 bits (76), Expect = 3e-33
 Identities = 257/316 (81%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                        
Query: 98   gctatggacaggctccccctaaaggccctccatcctatggcggtcctccaggtgattacg 157
            |||||||||| | ||| ||| |||| ||||| |||||||| || |||   ||||| || |
Sbjct: 1616 gctatggacaagttcctcctcaaggtcctccttcctatggtgggcctggtggtgactatg 1675

                                                                        
Query: 158  caccgcccccaagttcctatggaggcaacaatgtgtacagttcagagtctgcagtgccac 217
            || | || ||||| |||||||||||||| ||||  |||| |||||| |||||||||||||
Sbjct: 1676 cagcacctccaagctcctatggaggcaataatgcatacaattcagattctgcagtgccac 1735

                                                                        
Query: 218  cccctaacagctatggcagcggtcgaggctcttacccaccaagctatggtgccccacctc 277
            | ||||  ||||||||  | |||| ||| || || |||||||| |||||||| |||||||
Sbjct: 1736 ctcctagtagctatggtggtggtccaggttcatatccaccaagttatggtgcaccacctc 1795

                                                                        
Query: 278  cgaac---ccatatagtggcggtgccccaggggggcaaggaggcctgccacctacatatg 334
            |||||   |||||||| || ||||| ||||| || |||||  |||| || ||| ||||||
Sbjct: 1796 cgaacccgccatatagcggtggtgctccaggtggccaaggtagcctacctccttcatatg 1855

                                                                        
Query: 335  atggtggttatggtgctcggtctgtgcctgggggtggaggcgcaggtggtgctccaccac 394
            ||||||| ||||||| |||| || ||||||||||||||||| |   |||||| || ||||
Sbjct: 1856 atggtgggtatggtggtcggcctatgcctgggggtggaggccc---tggtgcacctccac 1912

                            
Query: 395  cttatcaaggtggtgg 410
            | ||||| ||||||||
Sbjct: 1913 cctatcatggtggtgg 1928



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                        
Query: 449  caaaggttaagcagtgtgatgcaaactgtgatgattcctgcgacaatgcaaggatttaca 508
            ||||||||||||||||||||||||||||||||||  | || || |||||||| |||||||
Sbjct: 1994 caaaggttaagcagtgtgatgcaaactgtgatgagacttgtgataatgcaagaatttaca 2053

                                                                        
Query: 509  tctcaaacctgccccctgatgtgactgttgaggaactgcaagagctttttggaggaattg 568
            |||| ||| | || ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 2054 tctccaacttacctcctgatgtgactgttgaggaactgcaagaactatttggaggaatcg 2113

                   
Query: 569  gccaggt 575
            |||||||
Sbjct: 2114 gccaggt 2120



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                        
Query: 572  aggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctggaacataaaaa 631
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 2872 aggttggaaggatcaagcagaaacgtggctacaaagaccagtggccctggaacataaaga 2931

                                  
Query: 632  tctacactgatgattctggaaa 653
            |||| |||||||| ||||||||
Sbjct: 2932 tctatactgatgactctggaaa 2953



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 61/69 (88%), Gaps = 3/69 (4%)
 Strand = Plus / Plus

                                                                        
Query: 19   cgtggttttgatgaccaccgtggtgggagcggtggcagttatgggggaagaggccaagag 78
            ||||| |||||||||||||||||||| || |||||   |||||||||||||| ||||| |
Sbjct: 1519 cgtggatttgatgaccaccgtggtggcaggggtgg---ttatgggggaagagaccaaggg 1575

                     
Query: 79   aacaaccaa 87
            |||||||||
Sbjct: 1576 aacaaccaa 1584
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>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1189A09
          Length = 167761

 Score =  151 bits (76), Expect = 3e-33
 Identities = 257/316 (81%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                          
Query: 98     gctatggacaggctccccctaaaggccctccatcctatggcggtcctccaggtgattacg 157
              |||||||||| | ||| ||| |||| ||||| |||||||| || |||   ||||| || |
Sbjct: 140875 gctatggacaagttcctcctcaaggtcctccttcctatggtgggcctggtggtgactatg 140934

                                                                          
Query: 158    caccgcccccaagttcctatggaggcaacaatgtgtacagttcagagtctgcagtgccac 217
              || | || ||||| |||||||||||||| ||||  |||| |||||| |||||||||||||
Sbjct: 140935 cagcacctccaagctcctatggaggcaataatgcatacaattcagattctgcagtgccac 140994

                                                                          
Query: 218    cccctaacagctatggcagcggtcgaggctcttacccaccaagctatggtgccccacctc 277
              | ||||  ||||||||  | |||| ||| || || |||||||| |||||||| |||||||
Sbjct: 140995 ctcctagtagctatggtggtggtccaggttcatatccaccaagttatggtgcaccacctc 141054

                                                                          
Query: 278    cgaac---ccatatagtggcggtgccccaggggggcaaggaggcctgccacctacatatg 334
              |||||   |||||||| || ||||| ||||| || |||||  |||| || ||| ||||||
Sbjct: 141055 cgaacccgccatatagcggtggtgctccaggtggccaaggtagcctacctccttcatatg 141114

                                                                          
Query: 335    atggtggttatggtgctcggtctgtgcctgggggtggaggcgcaggtggtgctccaccac 394
              ||||||| ||||||| |||| || ||||||||||||||||| |   |||||| || ||||
Sbjct: 141115 atggtgggtatggtggtcggcctatgcctgggggtggaggccc---tggtgcacctccac 141171

                              
Query: 395    cttatcaaggtggtgg 410
              | ||||| ||||||||
Sbjct: 141172 cctatcatggtggtgg 141187



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                          
Query: 449    caaaggttaagcagtgtgatgcaaactgtgatgattcctgcgacaatgcaaggatttaca 508
              ||||||||||||||||||||||||||||||||||  | || || |||||||| |||||||
Sbjct: 141253 caaaggttaagcagtgtgatgcaaactgtgatgagacttgtgataatgcaagaatttaca 141312

                                                                          
Query: 509    tctcaaacctgccccctgatgtgactgttgaggaactgcaagagctttttggaggaattg 568
              |||| ||| | || ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 141313 tctccaacttacctcctgatgtgactgttgaggaactgcaagaactatttggaggaatcg 141372

                     
Query: 569    gccaggt 575
              |||||||
Sbjct: 141373 gccaggt 141379



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                          
Query: 572    aggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctggaacataaaaa 631
              ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 142131 aggttggaaggatcaagcagaaacgtggctacaaagaccagtggccctggaacataaaga 142190

                                    
Query: 632    tctacactgatgattctggaaa 653
              |||| |||||||| ||||||||
Sbjct: 142191 tctatactgatgactctggaaa 142212



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 61/69 (88%), Gaps = 3/69 (4%)
 Strand = Plus / Plus

                                                                          
Query: 19     cgtggttttgatgaccaccgtggtgggagcggtggcagttatgggggaagaggccaagag 78
              ||||| |||||||||||||||||||| || |||||   |||||||||||||| ||||| |
Sbjct: 140778 cgtggatttgatgaccaccgtggtggcaggggtgg---ttatgggggaagagaccaaggg 140834

                       
Query: 79     aacaaccaa 87
              |||||||||
Sbjct: 140835 aacaaccaa 140843
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>gb|AY112202.1| Zea mays CL17047_1 mRNA sequence
          Length = 644

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 562 ggaattggccaggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctgg 621
           ||||| ||||||||||| ||||||||||     ||||| |||||||| ||||||||||||
Sbjct: 10  ggaatcggccaggttgggaggatcaagcnnnnncgtggttacaaagatcagtggccctgg 69

                                           
Query: 622 aacataaaaatctacactgatgattctggaaa 653
           |||||     ||||||||||||| ||||||||
Sbjct: 70  aacatnnnnntctacactgatgactctggaaa 101
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>gb|AY023548.1| Oryza sativa microsatellite MRG5873 containing (TGG)X8, genomic
           sequence
          Length = 224

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 449 caaaggttaagcagtgtgatgcaaactgtgatga 482
           ||||||||||||||||||||||||||||||||||
Sbjct: 175 caaaggttaagcagtgtgatgcaaactgtgatga 208



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 70/82 (85%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                       
Query: 329 catatgatggtggttatggtgctcggtctgtgcctgggggtggaggcgcaggtggtgctc 388
           ||||||||||||| ||||||| |||| || ||||||||||||||||| |   |||||| |
Sbjct: 31  catatgatggtgggtatggtggtcggcctatgcctgggggtggaggccc---tggtgcac 87

                                 
Query: 389 caccaccttatcaaggtggtgg 410
           | ||||| ||||| ||||||||
Sbjct: 88  ctccaccctatcatggtggtgg 109
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>ref|NM_180884.1| Arabidopsis thaliana binding / nucleic acid binding AT5G58470
            transcript variant AT5G58470.1 mRNA, complete cds
          Length = 2042

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                        
Query: 556  tttggaggaattggccaggttggaaggatcaagcaaaaacgtggctacaaagaccagtgg 615
            ||||| || |||||||| |||||||| || ||||| || ||||| |||||||| ||||||
Sbjct: 964  tttggtggcattggccaagttggaagaattaagcagaagcgtggttacaaagatcagtgg 1023

                                         
Query: 616  ccctggaacataaaaatctacactgatga 644
            ||||  || || || || |||||||||||
Sbjct: 1024 ccctataatattaagatttacactgatga 1052
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>ref|NM_125233.3| Arabidopsis thaliana binding / nucleic acid binding AT5G58470
            transcript variant AT5G58470.2 mRNA, complete cds
          Length = 2194

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                        
Query: 556  tttggaggaattggccaggttggaaggatcaagcaaaaacgtggctacaaagaccagtgg 615
            ||||| || |||||||| |||||||| || ||||| || ||||| |||||||| ||||||
Sbjct: 964  tttggtggcattggccaagttggaagaattaagcagaagcgtggttacaaagatcagtgg 1023

                                         
Query: 616  ccctggaacataaaaatctacactgatga 644
            ||||  || || || || |||||||||||
Sbjct: 1024 ccctataatattaagatttacactgatga 1052
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>gb|AF367294.1|AF367294 Arabidopsis thaliana AT5g58470/mqj2_60 mRNA, complete cds
          Length = 2042

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                        
Query: 556  tttggaggaattggccaggttggaaggatcaagcaaaaacgtggctacaaagaccagtgg 615
            ||||| || |||||||| |||||||| || ||||| || ||||| |||||||| ||||||
Sbjct: 964  tttggtggcattggccaagttggaagaattaagcagaagcgtggttacaaagatcagtgg 1023

                                         
Query: 616  ccctggaacataaaaatctacactgatga 644
            ||||  || || || || |||||||||||
Sbjct: 1024 ccctataatattaagatttacactgatga 1052
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>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2
          Length = 51440

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 572   aggttggaaggatcaagcaaaaacgtggctacaaagaccagtggccctggaacataaaaa 631
             |||||||||| || ||||| || ||||| |||||||| ||||||||||  || || || |
Sbjct: 25588 aggttggaagaattaagcagaagcgtggttacaaagatcagtggccctataatattaaga 25529

                          
Query: 632   tctacactgatga 644
             | |||||||||||
Sbjct: 25528 tttacactgatga 25516
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>gb|AC117679.8| Mus musculus chromosome 9, clone RP23-435I22, complete sequence
          Length = 213032

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 568    ggccaggttggaaggatcaagcaaa 592
              ||||||||||||||| |||||||||
Sbjct: 212554 ggccaggttggaaggttcaagcaaa 212530
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>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 1    ggtgatggtgggagtggccgtggttttga 29
            |||| ||||||||||||| ||||||||||
Sbjct: 5451 ggtggtggtgggagtggcggtggttttga 5423
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 326    ctacatatgatggtggttatg 346
              |||||||||||||||||||||
Sbjct: 708035 ctacatatgatggtggttatg 708055
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>gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosome 9, complete sequence
          Length = 191880

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 568    ggccaggttggaaggatcaagcaaa 592
              ||||||||||||||| |||||||||
Sbjct: 154711 ggccaggttggaaggttcaagcaaa 154735
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>gb|AF116526.1|AF116526 Mus musculus K-Cl cotransporter (KCC1) gene, partial cds
          Length = 1406

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 60  tgggggaagaggccaagagaacaac 84
           |||||||||||||||| ||||||||
Sbjct: 343 tgggggaagaggccaaaagaacaac 367
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>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete
              sequence
          Length = 198031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    tgtgtacagttcagagtctgc 209
              |||||||||||||||||||||
Sbjct: 171138 tgtgtacagttcagagtctgc 171158
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>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence
          Length = 181064

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 60    tgggggaagaggccaagagaacaac 84
             |||||||||||||||| ||||||||
Sbjct: 98863 tgggggaagaggccaaaagaacaac 98887
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>gb|AC155904.1| Loxodonta africana, clone Loxodonta africana-4339475P7, complete
             sequence
          Length = 38646

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   ggctcttacccaccaagctat 264
             |||||||||||||||||||||
Sbjct: 19935 ggctcttacccaccaagctat 19955
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>ref|NM_178779.2| Mus musculus ring finger protein 152 (Rnf152), mRNA
          Length = 5464

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gggggcaaggaggcctgcca 324
            ||||||||||||||||||||
Sbjct: 3746 gggggcaaggaggcctgcca 3765
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>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 570    ccaggttggaaggatcaagcaaaa 593
              ||||||||||||||| ||||||||
Sbjct: 141922 ccaggttggaaggatgaagcaaaa 141945
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>gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome 10, complete sequence
          Length = 232473

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   tgcaaggatttacatctcaa 514
             ||||||||||||||||||||
Sbjct: 90450 tgcaaggatttacatctcaa 90431
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>ref|XM_537586.2| PREDICTED: Canis familiaris similar to fetal Alzheimer antigen
            isoform 2 (LOC480467), mRNA
          Length = 9355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 364  gggggtggaggcgcaggtggtgct 387
            |||| |||||||||||||||||||
Sbjct: 7739 ggggctggaggcgcaggtggtgct 7716
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>emb|AL032631.1|CEY106G6H Caenorhabditis elegans YAC Y106G6H, complete sequence
          Length = 48613

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   gatttacatctcaaacctgc 520
             ||||||||||||||||||||
Sbjct: 29552 gatttacatctcaaacctgc 29533
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>gb|DQ463275.1| Uncultured bacterium clone ES3-56 16S ribosomal RNA gene, partial
           sequence
          Length = 748

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 408 tggcggcggttattctgcaa 427
           ||||||||||||||||||||
Sbjct: 62  tggcggcggttattctgcaa 81
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>gb|AC162907.5| Mus musculus BAC clone RP24-286I24 from chromosome 1, complete sequence
          Length = 190513

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    gggggcaaggaggcctgcca 324
              ||||||||||||||||||||
Sbjct: 132087 gggggcaaggaggcctgcca 132068
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>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ctgcaaatgctgcccctgaa 441
              ||||||||||||||||||||
Sbjct: 200853 ctgcaaatgctgcccctgaa 200834
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>ref|XM_690763.1| PREDICTED: Danio rerio similar to Kelch repeat and BTB domain
            containing protein 9 (LOC567466), partial mRNA
          Length = 1990

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 422  ctgcaaatgctgcccctgaa 441
            ||||||||||||||||||||
Sbjct: 1205 ctgcaaatgctgcccctgaa 1224
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>dbj|AK081452.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130018K22 product:unclassifiable, full
            insert sequence
          Length = 3201

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gggggcaaggaggcctgcca 324
            ||||||||||||||||||||
Sbjct: 1826 gggggcaaggaggcctgcca 1845
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>gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167276

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ccaccccctaacagctatgg 233
              ||||||||||||||||||||
Sbjct: 150396 ccaccccctaacagctatgg 150415
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>dbj|AK044638.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930029B02 product:hypothetical RING finger
            containing protein, full insert sequence
          Length = 5464

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gggggcaaggaggcctgcca 324
            ||||||||||||||||||||
Sbjct: 3746 gggggcaaggaggcctgcca 3765
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>ref|XM_220830.3| PREDICTED: Rattus norvegicus myeloperoxidase (Mpo), mRNA
          Length = 2299

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 ccaggggggcaaggaggcctgcca 324
           |||||||||| |||||||||||||
Sbjct: 89  ccaggggggccaggaggcctgcca 66
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>dbj|AP001685.1| Homo sapiens genomic DNA, chromosome 21q, section 29/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    cacctacatatgatggtggt 342
              ||||||||||||||||||||
Sbjct: 207110 cacctacatatgatggtggt 207091
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>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete
             sequence
          Length = 171451

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   tgcaaggatttacatctcaa 514
             ||||||||||||||||||||
Sbjct: 21476 tgcaaggatttacatctcaa 21495
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>emb|AL672146.9| Mouse DNA sequence from clone RP23-390P18 on chromosome X, complete
             sequence
          Length = 178473

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aagagaacaaccaaggtgac 93
             ||||||||||||||||||||
Sbjct: 30151 aagagaacaaccaaggtgac 30170
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>emb|AL935284.13| Zebrafish DNA sequence from clone CH211-271N3, complete sequence
          Length = 171556

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    ggggaagaggccaagagaacaacc 85
             |||||| |||||||||||||||||
Sbjct: 17824 ggggaaaaggccaagagaacaacc 17801
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>dbj|AP000966.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B876D15,
             LL56-APP region, complete sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cacctacatatgatggtggt 342
             ||||||||||||||||||||
Sbjct: 71482 cacctacatatgatggtggt 71463


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,288,901
Number of Sequences: 3902068
Number of extensions: 5288901
Number of successful extensions: 110563
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110433
Number of HSP's gapped (non-prelim): 123
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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