ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13b24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468494.1| Oryza sativa (japonica cultivar-group), mRNA 123 5e-25
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
3dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
4gb|AY109262.1| Zea mays PCO104376 mRNA sequence 107 3e-20
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
6dbj|AK070357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
8emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 54 4e-04
9ref|NM_197214.1| Oryza sativa (japonica cultivar-group) unknown ... 50 0.006
10gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 50 0.006
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
12dbj|AK063028.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
14ref|NM_117149.2| Arabidopsis thaliana unknown protein AT4G10810 ... 48 0.025
15gb|AY123019.1| Arabidopsis thaliana unknown protein (At4g10810) ... 48 0.025
16gb|AY063852.1| Arabidopsis thaliana unknown protein (At4g10810) ... 48 0.025
17emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, ... 48 0.025
18emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome 4, B... 48 0.025
19emb|BX829129.1|CNS0A3L7 Arabidopsis thaliana Full-length cDNA Co... 48 0.025
20gb|AY088550.1| Arabidopsis thaliana clone 7769 mRNA, complete se... 48 0.025
21gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 48 0.025
22gb|AY503624.1| Sorghum bicolor clone 0747-SC0706 RFLP probe pSB0747 46 0.10
23gb|AY503623.1| Sorghum bicolor clone 0747-SC0599 RFLP probe pSB0747 46 0.10
24gb|AY503622.1| Sorghum bicolor clone 0747-SC0326 RFLP probe pSB0747 46 0.10
25gb|AY503620.1| Sorghum bicolor clone 0747-RTx406 RFLP probe pSB0747 46 0.10
26gb|AY503619.1| Sorghum arundinaceum clone 0747-LWA8 RFLP probe p... 46 0.10
27gb|AY503618.1| Sorghum arundinaceum clone 0747-LWA4 RFLP probe p... 46 0.10
28gb|AY503617.1| Sorghum bicolor clone 0747-92381 RFLP probe pSB0747 46 0.10
29gb|AY503616.1| Sorghum bicolor clone 0747-82459 RFLP probe pSB0747 46 0.10
30gb|AY503615.1| Sorghum bicolor clone 0747-77034 RFLP probe pSB0747 46 0.10
31gb|AY503614.1| Sorghum bicolor clone 0747-56174 RFLP probe pSB0747 46 0.10
32gb|AY503613.1| Sorghum bicolor clone 0747-56003 RFLP probe pSB0747 46 0.10
33gb|AY503612.1| Sorghum bicolor clone 0747-514605 RFLP probe pSB0747 46 0.10
34gb|AY503611.1| Sorghum bicolor clone 0747-51030 RFLP probe pSB0747 46 0.10
35gb|AY503610.1| Sorghum bicolor clone 0747-50875 RFLP probe pSB0747 46 0.10
36gb|AY503609.1| Sorghum bicolor clone 0747-267380 RFLP probe pSB0747 46 0.10
37gb|AY503608.1| Sorghum bicolor clone 0747-257595 RFLP probe pSB0747 46 0.10
38gb|AY503607.1| Sorghum bicolor clone 0747-22913 RFLP probe pSB0747 46 0.10
39gb|AY503606.1| Sorghum arundinaceum clone 0747-225905 RFLP probe... 46 0.10
40gb|AY503605.1| Sorghum bicolor clone 0747-152702 RFLP probe pSB0747 46 0.10
41gb|AY503604.1| Sorghum bicolor clone 0747-102069 RFLP probe pSB0747 46 0.10
42gb|AY503603.1| Sorghum bicolor clone 0747-RTx430 RFLP probe pSB0747 46 0.10
43gb|AY503602.1| Sorghum bicolor clone 0747-BTx3197 RFLP probe pSB... 46 0.10
44gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genom... 44 0.40
45ref|XM_469260.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
46gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.40
47gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.40
48gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.40
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
50emb|AL022333.1|HS474I12 Human DNA sequence from clone RP3-474I12... 42 1.6
51emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.2
52emb|AL358472.54| Human DNA sequence from clone RP11-422P24 on ch... 40 6.2
53dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2 
>ref|XM_468494.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 249

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Plus

                                                                       
Query: 107 gctgggccagctggttcggcgccggcgtcacctccgccttcttcgcctcgctcgagcgct 166
           ||||||| |||||| | |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 8   gctgggcaagctgggtgggcgccagcgtcacctccgccttcttcgcctccctcgagcgct 67

                                 
Query: 167 gctcctgcatcaacctctccac 188
           ||||||||||||||||||||||
Sbjct: 68  gctcctgcatcaacctctccac 89
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                            
Query: 107      gctgggccagctggttcggcgccggcgtcacctccgccttcttcgcctcgctcgagcgct 166
                ||||||| |||||| | |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 35535544 gctgggcaagctgggtgggcgccagcgtcacctccgccttcttcgcctccctcgagcgct 35535485

                                      
Query: 167      gctcctgcatcaacctctccac 188
                ||||||||||||||||||||||
Sbjct: 35535484 gctcctgcatcaacctctccac 35535463
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>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0452F04
          Length = 171421

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                         
Query: 107   gctgggccagctggttcggcgccggcgtcacctccgccttcttcgcctcgctcgagcgct 166
             ||||||| |||||| | |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 51936 gctgggcaagctgggtgggcgccagcgtcacctccgccttcttcgcctccctcgagcgct 51877

                                   
Query: 167   gctcctgcatcaacctctccac 188
             ||||||||||||||||||||||
Sbjct: 51876 gctcctgcatcaacctctccac 51855
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>gb|AY109262.1| Zea mays PCO104376 mRNA sequence
          Length = 578

 Score =  107 bits (54), Expect = 3e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                     
Query: 131 gcgtcacctccgccttcttcgcctcgctcgagcgctgctcctgcatcaacctctccac 188
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 141 gcgtcacctccgccttcttcgcctccctcgagcgctgctcctgcatcaacctctccac 198
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 140      ccgccttcttcgcctcgctcgagcgctgctcctgc 174
                ||||||||||||| ||||| |||||||||||||||
Sbjct: 27242074 ccgccttcttcgcgtcgctggagcgctgctcctgc 27242040
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>dbj|AK070357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053N08, full
           insert sequence
          Length = 613

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 140 ccgccttcttcgcctcgctcgagcgctgctcctgc 174
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 173 ccgccttcttcgcgtcgctggagcgctgctcctgc 207
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 140      ccgccttcttcgcctcgctcgagcgctgctcctgc 174
                ||||||||||||| ||||| |||||||||||||||
Sbjct: 27167674 ccgccttcttcgcgtcgctggagcgctgctcctgc 27167640
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 140   ccgccttcttcgcctcgctcgagcgctgctcctgc 174
             ||||||||||||| ||||| |||||||||||||||
Sbjct: 55106 ccgccttcttcgcgtcgctggagcgctgctcctgc 55072
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>ref|NM_197214.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0078O01.13), mRNA
          Length = 631

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 214 gaggaggccaacgaccgccccctcatgct 242
           ||||||||||| |||||||||||||||||
Sbjct: 260 gaggaggccaaggaccgccccctcatgct 288
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
              sequence
          Length = 146664

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 214    gaggaggccaacgaccgccccctcatgct 242
              ||||||||||| |||||||||||||||||
Sbjct: 139626 gaggaggccaaggaccgccccctcatgct 139654
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 214      gaggaggccaacgaccgccccctcatgct 242
                ||||||||||| |||||||||||||||||
Sbjct: 18635815 gaggaggccaaggaccgccccctcatgct 18635843
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>dbj|AK063028.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C01, full
           insert sequence
          Length = 614

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 214 gaggaggccaacgaccgccccctcatgct 242
           ||||||||||| |||||||||||||||||
Sbjct: 295 gaggaggccaaggaccgccccctcatgct 323
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 214      gaggaggccaacgaccgccccctcatgct 242
                ||||||||||| |||||||||||||||||
Sbjct: 18646668 gaggaggccaaggaccgccccctcatgct 18646696
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>ref|NM_117149.2| Arabidopsis thaliana unknown protein AT4G10810 mRNA, complete cds
          Length = 621

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 139 tccgccttcttcgcctcgctcgagcgctgctc 170
           ||||||||||||||||| |||||||| |||||
Sbjct: 217 tccgccttcttcgcctccctcgagcgttgctc 248
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>gb|AY123019.1| Arabidopsis thaliana unknown protein (At4g10810) mRNA, complete cds
          Length = 277

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 139 tccgccttcttcgcctcgctcgagcgctgctc 170
           ||||||||||||||||| |||||||| |||||
Sbjct: 112 tccgccttcttcgcctccctcgagcgttgctc 143
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>gb|AY063852.1| Arabidopsis thaliana unknown protein (At4g10810) mRNA, complete cds
          Length = 535

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 139 tccgccttcttcgcctcgctcgagcgctgctc 170
           ||||||||||||||||| |||||||| |||||
Sbjct: 220 tccgccttcttcgcctccctcgagcgttgctc 251
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>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30
          Length = 198136

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 139   tccgccttcttcgcctcgctcgagcgctgctc 170
             ||||||||||||||||| |||||||| |||||
Sbjct: 83492 tccgccttcttcgcctccctcgagcgttgctc 83461
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>emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25I24 (ESSA
            project)
          Length = 95799

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 139  tccgccttcttcgcctcgctcgagcgctgctc 170
            ||||||||||||||||| |||||||| |||||
Sbjct: 2468 tccgccttcttcgcctccctcgagcgttgctc 2437
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>emb|BX829129.1|CNS0A3L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL73ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 521

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 139 tccgccttcttcgcctcgctcgagcgctgctc 170
           ||||||||||||||||| |||||||| |||||
Sbjct: 180 tccgccttcttcgcctccctcgagcgttgctc 211
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>gb|AY088550.1| Arabidopsis thaliana clone 7769 mRNA, complete sequence
          Length = 556

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 139 tccgccttcttcgcctcgctcgagcgctgctc 170
           ||||||||||||||||| |||||||| |||||
Sbjct: 217 tccgccttcttcgcctccctcgagcgttgctc 248
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>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12
          Length = 103673

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 139    tccgccttcttcgcctcgctcgagcgctgctc 170
              ||||||||||||||||| |||||||| |||||
Sbjct: 101206 tccgccttcttcgcctccctcgagcgttgctc 101237
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>gb|AY503624.1| Sorghum bicolor clone 0747-SC0706 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503623.1| Sorghum bicolor clone 0747-SC0599 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503622.1| Sorghum bicolor clone 0747-SC0326 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503620.1| Sorghum bicolor clone 0747-RTx406 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503619.1| Sorghum arundinaceum clone 0747-LWA8 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503618.1| Sorghum arundinaceum clone 0747-LWA4 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503617.1| Sorghum bicolor clone 0747-92381 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503616.1| Sorghum bicolor clone 0747-82459 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503615.1| Sorghum bicolor clone 0747-77034 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503614.1| Sorghum bicolor clone 0747-56174 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503613.1| Sorghum bicolor clone 0747-56003 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503612.1| Sorghum bicolor clone 0747-514605 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503611.1| Sorghum bicolor clone 0747-51030 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503610.1| Sorghum bicolor clone 0747-50875 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503609.1| Sorghum bicolor clone 0747-267380 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503608.1| Sorghum bicolor clone 0747-257595 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503607.1| Sorghum bicolor clone 0747-22913 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503606.1| Sorghum arundinaceum clone 0747-225905 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503605.1| Sorghum bicolor clone 0747-152702 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503604.1| Sorghum bicolor clone 0747-102069 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503603.1| Sorghum bicolor clone 0747-RTx430 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AY503602.1| Sorghum bicolor clone 0747-BTx3197 RFLP probe pSB0747
          Length = 304

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 tctcgtcgattctgctgctggcc 429
           |||||||||||||||||||||||
Sbjct: 205 tctcgtcgattctgctgctggcc 227
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>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete
             sequence
          Length = 129655

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 145   ttcttcgcctcgctcgagcgctgctcctgc 174
             ||||||||||| |||||||| |||||||||
Sbjct: 79166 ttcttcgcctccctcgagcggtgctcctgc 79137
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>ref|XM_469260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 375

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 145 ttcttcgcctcgctcgagcgctgctcctgc 174
           ||||||||||| |||||||| |||||||||
Sbjct: 157 ttcttcgcctccctcgagcggtgctcctgc 186
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 145      ttcttcgcctcgctcgagcgctgctcctgc 174
                ||||||||||| |||||||| |||||||||
Sbjct: 26431126 ttcttcgcctccctcgagcggtgctcctgc 26431097
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 123     cggcgccggcgtcacctccgcc 144
               ||||||||||||||||||||||
Sbjct: 2779452 cggcgccggcgtcacctccgcc 2779473
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    gctgctcgtcgtgcccgccggc 399
              ||||||||||||||||||||||
Sbjct: 328418 gctgctcgtcgtgcccgccggc 328397
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 145      ttcttcgcctcgctcgagcgctgctcctgc 174
                ||||||||||| |||||||| |||||||||
Sbjct: 26522435 ttcttcgcctccctcgagcggtgctcctgc 26522406
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>emb|AL022333.1|HS474I12 Human DNA sequence from clone RP3-474I12 on chromosome 22q13.1-13.2,
             complete sequence
          Length = 80343

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   tgctgctggccggccatgttt 439
             |||||||||||||||||||||
Sbjct: 19371 tgctgctggccggccatgttt 19391
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     tgctgctcgtcgtgcccgcc 396
               ||||||||||||||||||||
Sbjct: 2387638 tgctgctcgtcgtgcccgcc 2387657
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>emb|AL358472.54| Human DNA sequence from clone RP11-422P24 on chromosome 1 Contains the 5'
              UTR of the gene for transcription repressor p66 beta
              component of the MeCP1 complex (P66beta), the KIAA0476 gene
              for a novel protein, the gene for transducer of regulated
              cAMP response element-binding protein (CREB) 2 (TORC2), the
              SLC39A1 gene for solute carrier family 39 (zinc
              transporter), member 1, the CREB3L4 gene for cAMP
              responsive element binding protein 3-like 4, the JTB gene
              for jumping translocation breakpoint, the RAB13 gene for
              RAB13, member RAS oncogene family, the RPS27 gene for
              ribosomal protein S27 (metallopanstimulin 1), the 3' end of
              the gene for nuclear pore membrane glycoprotein 210-like
              (LOC91181), a ribosomal protein S7 (RPS7) pseudogene and a
              CpG island, complete sequence
          Length = 175827

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    tgctcctgcatcaacctctc 185
              ||||||||||||||||||||
Sbjct: 136262 tgctcctgcatcaacctctc 136281
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    tctgctgctggccggccatg 436
              ||||||||||||||||||||
Sbjct: 946337 tctgctgctggccggccatg 946356


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,527,279
Number of Sequences: 3902068
Number of extensions: 2527279
Number of successful extensions: 49360
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48871
Number of HSP's gapped (non-prelim): 489
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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