ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13b22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105962.1| Zea mays PCO079729 mRNA sequence 74 6e-10
2gb|AY108604.1| Zea mays PCO079730 mRNA sequence 72 2e-09
3ref|XM_506947.1| PREDICTED Oryza sativa (japonica cultivar-group... 62 2e-06
4ref|XM_467525.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
5dbj|AK104061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
6dbj|AK061514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
8dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
9dbj|AK100772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
10dbj|AB013853.1| Vigna radiata ARG8 mRNA for GPI-anchored protein... 44 0.54
11dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone... 44 0.54
12ref|NM_190558.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
13gb|AC151425.22| Medicago truncatula clone mth2-4l6, complete seq... 42 2.2
14gb|AC152871.14| Medicago truncatula clone mth2-83e5, complete se... 42 2.2
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
17dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
18dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19ref|NM_006116.2| Homo sapiens mitogen-activated protein kinase k... 40 8.5
20ref|NM_153497.2| Homo sapiens mitogen-activated protein kinase k... 40 8.5
21gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 8.5
22gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA ... 40 8.5
23gb|BC038582.1| Homo sapiens mitogen-activated protein kinase kin... 40 8.5
24gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome ... 40 8.5
25gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, comple... 40 8.5
26gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complet... 40 8.5
27ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), ... 40 8.5
28gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 40 8.5
29gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosom... 40 8.5
30emb|Z83845.14|HS407F17 Human DNA sequence from clone RP3-407F17 ... 40 8.5
31gb|DQ314876.2| Homo sapiens mitogen-activated protein kinase kin... 40 8.5
32gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.5
33gb|AE005914.1| Caulobacter crescentus CB15 section 240 of 359 of... 40 8.5
34gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, comple... 40 8.5
35gb|AC000039.3| Homo sapiens Cosmid Clone p129d11 unknown chromos... 40 8.5
36gb|AE009715.1| Brucella melitensis 16M chromosome II, section 77... 40 8.5
37gb|AF117979.1|AF117979 Homo sapiens homeodomain transcription fa... 40 8.5
38gb|AF425640.1| Homo sapiens TAB1-like protein mRNA, complete cds 40 8.5
39dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.5
40gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 8.5
41gb|BC050554.1| Homo sapiens mitogen-activated protein kinase kin... 40 8.5
42gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, comple... 40 8.5
43gb|U49928.1|HSU49928 Homo sapiens TAK1 binding protein (TAB1) mR... 40 8.5
44emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 40 8.5
45dbj|D82344.1| Homo sapiens mRNA for NBPhox, complete cds 40 8.5
46dbj|AB015671.1| Homo sapiens NBPhox gene, complete cds 40 8.5 
>gb|AY105962.1| Zea mays PCO079729 mRNA sequence
          Length = 883

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 316 tgaacttcgagtaccaggactacacaatcatcacaagcaagtgcaaagcgccaaagt 372
           ||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||||
Sbjct: 442 tgaactttgagttccaaaactacacaatcatcacaagcaagtgcaaagggccaaagt 498
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>gb|AY108604.1| Zea mays PCO079730 mRNA sequence
          Length = 1279

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactaca 339
           ||||||||||||||||| ||||| |    || ||| ||||||| |||| |||  ||||||
Sbjct: 489 ggaggagcttgctgcaggccaagaatagttgccctgtgaactttgagttccaaaactaca 548

                                   
Query: 340 caatcatcacaagcaagtgcaaag 363
           ||||||||||||||||||||||||
Sbjct: 549 caatcatcacaagcaagtgcaaag 572
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>ref|XM_506947.1| PREDICTED Oryza sativa (japonica cultivar-group), P0654B04.18 mRNA
          Length = 1012

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactaca 339
           ||||||||||||||||| ||||| |    || ||| |||| || |||| |||  ||||||
Sbjct: 395 ggaggagcttgctgcaggccaagaagaattgccctgtgaattttgagttccaaaactaca 454

                                                                       
Query: 340 caatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtgatgctt 399
           |||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |||||||
Sbjct: 455 caataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcgatgctt 514

                                  
Query: 400 tcaagaaatttgcatgcccattt 422
           ||||| |||| ||||||||||||
Sbjct: 515 tcaaggaattcgcatgcccattt 537
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>ref|XM_467525.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 952

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactaca 339
           ||||||||||||||||| ||||| |    || ||| |||| || |||| |||  ||||||
Sbjct: 333 ggaggagcttgctgcaggccaagaagaattgccctgtgaattttgagttccaaaactaca 392

                                                                       
Query: 340 caatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtgatgctt 399
           |||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |||||||
Sbjct: 393 caataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcgatgctt 452

                                  
Query: 400 tcaagaaatttgcatgcccattt 422
           ||||| |||| ||||||||||||
Sbjct: 453 tcaaggaattcgcatgcccattt 475
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>dbj|AK104061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-A04, full
           insert sequence
          Length = 952

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactaca 339
           ||||||||||||||||| ||||| |    || ||| |||| || |||| |||  ||||||
Sbjct: 333 ggaggagcttgctgcaggccaagaagaattgccctgtgaattttgagttccaaaactaca 392

                                                                       
Query: 340 caatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtgatgctt 399
           |||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |||||||
Sbjct: 393 caataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcgatgctt 452

                                  
Query: 400 tcaagaaatttgcatgcccattt 422
           ||||| |||| ||||||||||||
Sbjct: 453 tcaaggaattcgcatgcccattt 475
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>dbj|AK061514.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H03, full
           insert sequence
          Length = 1012

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactaca 339
           ||||||||||||||||| ||||| |    || ||| |||| || |||| |||  ||||||
Sbjct: 395 ggaggagcttgctgcaggccaagaagaattgccctgtgaattttgagttccaaaactaca 454

                                                                       
Query: 340 caatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtgatgctt 399
           |||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |||||||
Sbjct: 455 caataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcgatgctt 514

                                  
Query: 400 tcaagaaatttgcatgcccattt 422
           ||||| |||| ||||||||||||
Sbjct: 515 tcaaggaattcgcatgcccattt 537
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                            
Query: 334      actacacaatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtg 393
                |||||||||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |
Sbjct: 29966299 actacacaataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcg 29966240

                                             
Query: 394      atgctttcaagaaatttgcatgcccattt 422
                ||||||||||| |||| ||||||||||||
Sbjct: 29966239 atgctttcaaggaattcgcatgcccattt 29966211
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 334   actacacaatcatcacaagcaagtgcaaagcgccaaagtatcctctcacggaatgctgtg 393
             |||||||||| ||||||||||||||||||| ||||  || ||||   |   | ||||| |
Sbjct: 66575 actacacaataatcacaagcaagtgcaaagggccacggtttcctgctaaacagtgctgcg 66516

                                          
Query: 394   atgctttcaagaaatttgcatgcccattt 422
             ||||||||||| |||| ||||||||||||
Sbjct: 66515 atgctttcaaggaattcgcatgcccattt 66487
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>dbj|AK100772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120A05, full
           insert sequence
          Length = 783

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 aggaggagcttgctgcagaccaaggactcctgtcctctgaacttcgagtaccaggactac 338
           |||||||||||||| ||| ||||||    ||| ||| ||| ||| ||| ||||| |||||
Sbjct: 175 aggaggagcttgcttcaggccaagggtggctgccctgtgagctttgagaaccagaactac 234

                                         
Query: 339 acaatcatcacaagcaagtgcaaagcgcca 368
           || | |||||| |||||||||||| |||||
Sbjct: 235 acgaccatcaccagcaagtgcaaatcgcca 264
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>dbj|AB013853.1| Vigna radiata ARG8 mRNA for GPI-anchored protein, complete cds
          Length = 730

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 334 actacacaatcatcacaagcaagtgcaaag 363
           |||||||||| ||||||||||| |||||||
Sbjct: 256 actacacaataatcacaagcaaatgcaaag 285
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>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
             complete sequence
          Length = 69411

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 334   actacacaatcatcacaagcaagtgcaaag 363
             |||||||||| ||||||||||| |||||||
Sbjct: 66059 actacacaataatcacaagcaaatgcaaag 66030
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>ref|NM_190558.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 186 ttcctcttccttgccgccgcc 206
           |||||||||||||||||||||
Sbjct: 290 ttcctcttccttgccgccgcc 270
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>gb|AC151425.22| Medicago truncatula clone mth2-4l6, complete sequence
          Length = 122088

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   ctggtttctgttcctcttcct 196
             |||||||||||||||||||||
Sbjct: 94214 ctggtttctgttcctcttcct 94234
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>gb|AC152871.14| Medicago truncatula clone mth2-83e5, complete sequence
          Length = 103622

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   ctggtttctgttcctcttcct 196
             |||||||||||||||||||||
Sbjct: 88284 ctggtttctgttcctcttcct 88304
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 328      accaggactacacaatcatcacaagcaagtgcaaagcgcca 368
                ||||| ||||||| | |||||| |||||||||||| |||||
Sbjct: 11306986 accagaactacacgaccatcaccagcaagtgcaaatcgcca 11307026
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 186      ttcctcttccttgccgccgcc 206
                |||||||||||||||||||||
Sbjct: 36182283 ttcctcttccttgccgccgcc 36182303
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>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406G08
          Length = 144233

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   ttcctcttccttgccgccgcc 206
             |||||||||||||||||||||
Sbjct: 59296 ttcctcttccttgccgccgcc 59316
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>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1435D02
          Length = 131152

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 328    accaggactacacaatcatcacaagcaagtgcaaagcgcca 368
              ||||| ||||||| | |||||| |||||||||||| |||||
Sbjct: 122285 accagaactacacgaccatcaccagcaagtgcaaatcgcca 122325
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>ref|NM_006116.2| Homo sapiens mitogen-activated protein kinase kinase kinase 7
           interacting protein 1 (MAP3K7IP1), transcript variant
           alpha, mRNA
          Length = 3240

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 61  gaggaggagcttgctgcaga 80
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>ref|NM_153497.2| Homo sapiens mitogen-activated protein kinase kinase kinase 7
           interacting protein 1 (MAP3K7IP1), transcript variant
           beta, mRNA
          Length = 1994

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 61  gaggaggagcttgctgcaga 80
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cgccgccctggccgggttcg 219
              ||||||||||||||||||||
Sbjct: 437639 cgccgccctggccgggttcg 437658
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>gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678
           IMAGE:3161284), complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 cgccgccctggccgggttcgcctc 223
           ||||||||| ||||||||||||||
Sbjct: 817 cgccgcccttgccgggttcgcctc 794
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>gb|BC038582.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7
           interacting protein 1, mRNA (cDNA clone IMAGE:5240738),
           partial cds
          Length = 3290

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 36  gaggaggagcttgctgcaga 55
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>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence
          Length = 234041

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 432    ctcaacaacaggagcactgactgc 455
              |||||||| |||||||||||||||
Sbjct: 224802 ctcaacaaaaggagcactgactgc 224779
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>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    atgctttcaagaaatttgca 413
              ||||||||||||||||||||
Sbjct: 168188 atgctttcaagaaatttgca 168169
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>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence
          Length = 211697

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ggaggaggagcttgctgcag 296
              ||||||||||||||||||||
Sbjct: 145554 ggaggaggagcttgctgcag 145535
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>ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA
          Length = 3029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  cgccgccctggccgggttcgcctc 223
            ||||||||| ||||||||||||||
Sbjct: 1081 cgccgcccttgccgggttcgcctc 1058
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>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   agaaatttgcatgcccattt 422
             ||||||||||||||||||||
Sbjct: 90205 agaaatttgcatgcccattt 90186
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>gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosome 6, complete sequence
          Length = 199100

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ggaggaggagcttgctgcag 296
              ||||||||||||||||||||
Sbjct: 196614 ggaggaggagcttgctgcag 196633
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>emb|Z83845.14|HS407F17 Human DNA sequence from clone RP3-407F17 on chromosome 22q13.1-13.2
             Contains the gene for TAB1 (TAK1 binding protein 1), ESTs,
             STSs, GSSs and two putative CpG islands, complete sequence
          Length = 69660

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gaggaggagcttgctgcaga 297
             ||||||||||||||||||||
Sbjct: 10063 gaggaggagcttgctgcaga 10082
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>gb|DQ314876.2| Homo sapiens mitogen-activated protein kinase kinase kinase 7
            interacting protein 1 (MAP3K7IP1) gene, complete cds
          Length = 35558

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaggaggagcttgctgcaga 297
            ||||||||||||||||||||
Sbjct: 1569 gaggaggagcttgctgcaga 1588
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 12      ctcgctgccctgccatgcgc 31
               ||||||||||||||||||||
Sbjct: 1500172 ctcgctgccctgccatgcgc 1500153
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>gb|AE005914.1| Caulobacter crescentus CB15 section 240 of 359 of the complete genome
          Length = 10158

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  ctcttccttgccgccgccctggcc 212
            |||| |||||||||||||||||||
Sbjct: 7384 ctctcccttgccgccgccctggcc 7361
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>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence
          Length = 187067

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 200    cgccgccctggccgggttcgcctc 223
              ||||||||| ||||||||||||||
Sbjct: 102741 cgccgcccttgccgggttcgcctc 102764
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>gb|AC000039.3| Homo sapiens Cosmid Clone p129d11 unknown chromosomal location,
             complete sequence
          Length = 38381

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gaggaggagcttgctgcaga 297
             ||||||||||||||||||||
Sbjct: 35580 gaggaggagcttgctgcaga 35599
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>gb|AE009715.1| Brucella melitensis 16M chromosome II, section 77 of 107 of the
            complete sequence
          Length = 10298

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  cgccgccctggccgggttcg 219
            ||||||||||||||||||||
Sbjct: 7047 cgccgccctggccgggttcg 7028
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>gb|AF117979.1|AF117979 Homo sapiens homeodomain transcription factor NBPHOX (PMX2B) gene,
            complete cds
          Length = 4885

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  cgccgccctggccgggttcgcctc 223
            ||||||||| ||||||||||||||
Sbjct: 2937 cgccgcccttgccgggttcgcctc 2914
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>gb|AF425640.1| Homo sapiens TAB1-like protein mRNA, complete cds
          Length = 1661

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 30  gaggaggagcttgctgcaga 49
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     ttccttgccgccgccctggc 211
               ||||||||||||||||||||
Sbjct: 2611454 ttccttgccgccgccctggc 2611435
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    cgccgccctggccgggttcg 219
              ||||||||||||||||||||
Sbjct: 777444 cgccgccctggccgggttcg 777425
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>gb|BC050554.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7
           interacting protein 1, transcript variant alpha, mRNA
           (cDNA clone MGC:57664 IMAGE:6202841), complete cds
          Length = 3253

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 74  gaggaggagcttgctgcaga 93
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>gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, complete sequence
          Length = 216721

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 432   ctcaacaacaggagcactgactgc 455
             |||||||| |||||||||||||||
Sbjct: 69225 ctcaacaaaaggagcactgactgc 69202
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>gb|U49928.1|HSU49928 Homo sapiens TAK1 binding protein (TAB1) mRNA, complete cds
          Length = 3096

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaggaggagcttgctgcaga 297
           ||||||||||||||||||||
Sbjct: 32  gaggaggagcttgctgcaga 51
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    cgccgccctggccgggttcg 219
              ||||||||||||||||||||
Sbjct: 777424 cgccgccctggccgggttcg 777405
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>dbj|D82344.1| Homo sapiens mRNA for NBPhox, complete cds
          Length = 3029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  cgccgccctggccgggttcgcctc 223
            ||||||||| ||||||||||||||
Sbjct: 1081 cgccgcccttgccgggttcgcctc 1058
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>dbj|AB015671.1| Homo sapiens NBPhox gene, complete cds
          Length = 5508

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  cgccgccctggccgggttcgcctc 223
            ||||||||| ||||||||||||||
Sbjct: 3467 cgccgcccttgccgggttcgcctc 3444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,814,177
Number of Sequences: 3902068
Number of extensions: 4814177
Number of successful extensions: 99349
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98952
Number of HSP's gapped (non-prelim): 395
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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