ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal13b16 |
|---|---|
| Clone Library Name | barley_pub |
>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 228 Score = 172 bits (437), Expect = 5e-43 Identities = 94/167 (56%), Positives = 103/167 (61%), Gaps = 2/167 (1%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 NV++EAGLKKLD YLL+RSYISGYQAS DDLAVYS FS AP S+ TNVARW+ HIDALL+ Sbjct: 6 NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 65 Query: 281 LSGVTAPGQGVKVLSSIVPETST--TXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXX 454 LSGVTA GQGVKV S+ VP ST LF Sbjct: 66 LSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERA 125 Query: 455 XXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLLDVKPWDDETDM KLEEAVR++KMEGLLW Sbjct: 126 AAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLW 172
>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 225 Score = 152 bits (383), Expect = 9e-37 Identities = 82/165 (49%), Positives = 95/165 (57%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 NVN+EAGL+KLD YLL+RSYISGYQASKDD+ V++ AP ++ NV RWY+HI ALL+ Sbjct: 6 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLR 65 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 SGVTA G+GVKV S S T LF Sbjct: 66 SSGVTAEGEGVKV-ESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAA 124 Query: 461 XXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLLDVKPWDDETDM KLEEAVR++KMEGLLW Sbjct: 125 VKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLW 169
>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 225 Score = 149 bits (375), Expect = 8e-36 Identities = 81/166 (48%), Positives = 97/166 (58%) Frame = +2 Query: 98 FNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALL 277 +++++EAGL+KLD YLLSRSYISGYQASKDDLAV++ + P S NV+RWYNH++ALL Sbjct: 5 YDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALL 64 Query: 278 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 457 ++SGV+A G GV V S V T LF Sbjct: 65 RISGVSAEGCGVTVEGSSV-ATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAA 123 Query: 458 XXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLLDVKPWDDETDM KLEEAVRSIKM+GLLW Sbjct: 124 AVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLW 169
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 141 bits (355), Expect = 2e-33 Identities = 79/175 (45%), Positives = 97/175 (55%), Gaps = 5/175 (2%) Frame = +2 Query: 86 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 265 MAA N+N++AGLKKLD +LL+RSYI+GYQASKDD+ V++ + P S N +RWYNHI Sbjct: 1 MAAFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHI 60 Query: 266 DALLKLSGVTAPGQGVKVLSS--IVPE---TSTTXXXXXXXXXXXXXXXXXLFXXXXXXX 430 DALL++SGV+A G GV V S I E T LF Sbjct: 61 DALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEE 120 Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VL+D+KPWDDETDM KLEEAV+SI+MEGL W Sbjct: 121 KKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFW 175
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 140 bits (354), Expect = 2e-33 Identities = 80/175 (45%), Positives = 98/175 (56%), Gaps = 5/175 (2%) Frame = +2 Query: 86 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 265 MAA N+N+ +GLKKLD +LL+RSYI+GYQASKDD+ V++ S P S NV+RW+NHI Sbjct: 1 MAAFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHI 60 Query: 266 DALLKLSGVTAPGQGVKVL-SSIVPE----TSTTXXXXXXXXXXXXXXXXXLFXXXXXXX 430 DALL++SGV+A G GV V SS + E T LF Sbjct: 61 DALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEE 120 Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VL+D+KPWDDETDM KLEEAVRSI+MEGL W Sbjct: 121 KKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFW 175
>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 230 Score = 122 bits (306), Expect = 8e-28 Identities = 74/172 (43%), Positives = 89/172 (51%), Gaps = 5/172 (2%) Frame = +2 Query: 89 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 265 A TF+ +++ AGL LD YLLSRSYI+GYQASKDDL V+S A ++ NV+RWY HI Sbjct: 1 AVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHI 60 Query: 266 DALLKLSGVTAPGQGVKVLSSIVPE---TSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXX 436 DALL++SGV+ G GV V + T LF Sbjct: 61 DALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKK 120 Query: 437 XXXXXXXXXXXX-XXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGL 589 VLLDVKPWDDETDM KLEEAVRS++ EGL Sbjct: 121 AAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGL 172
>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)| Length = 227 Score = 91.3 bits (225), Expect = 2e-18 Identities = 61/173 (35%), Positives = 78/173 (45%), Gaps = 8/173 (4%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGLK L+ +L +SYI GY S+ D+AV+ S APP+ + RWYNHI + K Sbjct: 4 DLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPADLFHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPET--STTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXX 454 + PG K L + P TT LF Sbjct: 64 QKS-SLPGVK-KPLGNYGPVNIEDTTGSTAKDTKEEDDDDDIDLFGSDDEEENEESKRVR 121 Query: 455 XXXXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VRSI+MEGL+W Sbjct: 122 EERLAQYEAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQMEGLVW 174
>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)| Length = 226 Score = 89.4 bits (220), Expect = 7e-18 Identities = 59/172 (34%), Positives = 76/172 (44%), Gaps = 7/172 (4%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGLK L +L +SYI GY S+ D+AV+ S APP+ + RWYNHI + K Sbjct: 4 DLKSPAGLKVLKEFLADKSYIEGYVPSQADVAVFDALSAAPPADLFHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVP-ETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 457 + PG K L + P T LF Sbjct: 64 QKS-SLPGVK-KALGNYGPVNIEDTTGSAAKETKEEDDDDIDLFGSDDEEESEDAKRVRD 121 Query: 458 XXXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE +RSI+M+GLLW Sbjct: 122 ERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETDMGKLEECLRSIQMDGLLW 173
>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation| factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta' 2) (EF-1-beta' 2) Length = 224 Score = 89.4 bits (220), Expect = 7e-18 Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 1/171 (0%) Frame = +2 Query: 86 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 262 MA TF+ ++ E G+K ++ +L ++YISG Q S DD+ VY+ V P N ++WY Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60 Query: 263 IDALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX 442 + + L S PG+ V V + LF Sbjct: 61 VASQLAKS---FPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAA 117 Query: 443 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VL+DVKPWDDETDM KLEEAVR ++M GL W Sbjct: 118 EEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFW 168
>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 223 Score = 89.4 bits (220), Expect = 7e-18 Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 7/176 (3%) Frame = +2 Query: 89 AATF-NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 265 A TF +++ GLK L+ +L ++Y+SG SKDD+ V++ P + N ARWY+ + Sbjct: 1 AVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTV 60 Query: 266 DALL------KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXX 427 A L K GV PG G +S LF Sbjct: 61 AAALASRFPGKAVGVNLPGGGAA--------SSAAAAAPAAKDADEDDDDLDLFGDETEE 112 Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLLDVKPWDDETDM KLEEAVRS++MEGL W Sbjct: 113 DKKAADERAASKASSKKKESGKSS-VLLDVKPWDDETDMKKLEEAVRSVQMEGLTW 167
>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)| Length = 221 Score = 89.0 bits (219), Expect = 1e-17 Identities = 53/165 (32%), Positives = 69/165 (41%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 +V GLK+L+ +L SYISGY SK DL+V+ AP + NVARWY HI + Sbjct: 4 DVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHIASFEA 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 G + L+ P + Sbjct: 64 AERAAWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDDEEDEEAERIKQERVAAYA 123 Query: 461 XXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLLDVKPWDDETDM ++E VR+I+M+GLLW Sbjct: 124 AKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLW 168
>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation| factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) Length = 228 Score = 88.6 bits (218), Expect = 1e-17 Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 5/175 (2%) Frame = +2 Query: 86 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 262 MA TF+ ++ E GLK L+ +L ++YISG Q S DD+ VY+ P N ++WY+ Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60 Query: 263 IDALLKLSGVTAPGQ--GVKVLSSIVP--ETSTTXXXXXXXXXXXXXXXXXLFXXXXXXX 430 + + L S PG+ GV+V + P E LF Sbjct: 61 VASHLAKS---FPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDE 117 Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VLL+VKPWDDETDM KLEEAVRS++M GL W Sbjct: 118 KKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTW 172
>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 87.0 bits (214), Expect = 4e-17 Identities = 55/171 (32%), Positives = 72/171 (42%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A G+K LF Sbjct: 64 EK---ASLPGIKKALGTYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 461 XXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDMVKLEE VRSI+ +GL+W Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDMVKLEECVRSIQADGLVW 171
>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 86.3 bits (212), Expect = 6e-17 Identities = 56/171 (32%), Positives = 72/171 (42%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A GVK +S LF Sbjct: 64 EK---ASLPGVKKSLGKYGPSSVEDTTGSGAADAKDDDDIDLFGSDDEEESEEAKKLREE 120 Query: 461 XXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VRSI+ +GL+W Sbjct: 121 RLAQYESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVW 171
>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 85.5 bits (210), Expect = 1e-16 Identities = 55/171 (32%), Positives = 71/171 (41%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A GVK LF Sbjct: 64 EK---ASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 461 XXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VRSI+ +GL+W Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVW 171
>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 85.5 bits (210), Expect = 1e-16 Identities = 55/171 (32%), Positives = 72/171 (42%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A GVK + LF Sbjct: 64 EK---ASLPGVKKALGKYGPANVEDTTESGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 461 XXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VRSI+ +GL+W Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVW 171
>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 215 Score = 85.5 bits (210), Expect = 1e-16 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 1/170 (0%) Frame = +2 Query: 89 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 265 A TF+ ++ GLK L+ +L ++YISG +KDD+ V++ + P + N ARWY+ + Sbjct: 1 AVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTV 60 Query: 266 DALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXX 445 A + PGQ V +S P + LF Sbjct: 61 AAAVSSR---FPGQASGVSASSAPAAAAPAASKDEDDDDDMD----LFGDETEEDKKAAA 113 Query: 446 XXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 VL+D+KPWDDETDM KLEEAVRS++MEGL W Sbjct: 114 EREAAKPAKKKESGKSS--VLMDIKPWDDETDMKKLEEAVRSVQMEGLTW 161
>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 83.6 bits (205), Expect = 4e-16 Identities = 53/171 (30%), Positives = 70/171 (40%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGL+ L+ +L +SYI GY S+ D+AV+ PP+ + RWYNHI + K Sbjct: 4 DLKSAAGLRVLNDFLADKSYIEGYVPSQADIAVFEAVGAPPPADLFHALRWYNHIKSYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A GVK LF Sbjct: 64 EK---ASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 461 XXXXXXXXXX------XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VRSI+ +GL+W Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVW 171
>EF1B2_BOMMO (P29522) Elongation factor 1-beta'| Length = 221 Score = 79.0 bits (193), Expect = 1e-14 Identities = 48/168 (28%), Positives = 66/168 (39%) Frame = +2 Query: 92 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDA 271 A +V GL L+ YL +SY+SGY S+ D+ V+ + AP + +V RWYN I + Sbjct: 1 AVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIAS 60 Query: 272 LLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXX 451 T + + P Sbjct: 61 YTSAERKTWSQGTSPLTAGAKPTAPAPAAKDDDDDDVDLFGSGDEEEDAEAERIREERLK 120 Query: 452 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM ++E VR+I+MEGLLW Sbjct: 121 AYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLW 168
>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)| Length = 206 Score = 76.6 bits (187), Expect = 5e-14 Identities = 43/168 (25%), Positives = 74/168 (44%) Frame = +2 Query: 92 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDA 271 A ++ AE G ++L+ L ++SY+ GY+ S++D+A +++ + AP + RWY HI + Sbjct: 1 ANIDLKAEKGQEQLNELLANKSYLQGYEPSQEDVAAFNQLNKAPSDKFPYLLRWYKHISS 60 Query: 272 LLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXX 451 PG +P +++ Sbjct: 61 FSDAEKKGFPG---------IPTSASKEEDDDVDLFGSDEEDEE------AEKIKAERMK 105 Query: 452 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V+LD+KPWDDETDM ++E+ VRS++M+GL+W Sbjct: 106 AYSDKKSKKPAIVAKSSVILDIKPWDDETDMAEMEKLVRSVQMDGLVW 153
>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)| Length = 214 Score = 76.3 bits (186), Expect = 6e-14 Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 1/166 (0%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPST-CTNVARWYNHIDALL 277 ++ ++AGLK+L+ +LL +S+I GY+ S+ D V+ VAP + N ARWY I A Sbjct: 5 DLTSDAGLKQLNDFLLDKSFIEGYEPSQADAVVFKAVGVAPDTAKYPNGARWYKQI-ATY 63 Query: 278 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 457 L+ T PG K +S+ PE + Sbjct: 64 DLA--TLPGTA-KEVSAYGPEGAAAAEEDEIDLFGSDEEEDP-----EAERIKAERVAEY 115 Query: 458 XXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V LDVKPWDDET M +LE+AVRSI+M+GL+W Sbjct: 116 NKKKAAKPKAVHKSLVTLDVKPWDDETPMDELEKAVRSIQMDGLVW 161
>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 63.9 bits (154), Expect = 3e-10 Identities = 58/170 (34%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ WYNHI K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSXPPPAXLXXXXXWYNHIKXYEK 63 Query: 281 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 460 A GVK + LF Sbjct: 64 ---EKASLPGVKKALGKYGPANVEDTTESGATDSKDDDDIDLFXXXXXXXXXXAKXLREE 120 Query: 461 XXXXXXXXXXXXXXVL------LDVKPWDDETDMVKLEEAVRSIKMEGLL 592 ++ VKPWDDE M KLEE V SI+ +GL+ Sbjct: 121 RLAQYESKKAKKPALVAKSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLV 170
>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1| (EF-1-beta/delta 1) Length = 213 Score = 60.5 bits (145), Expect = 4e-09 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 1/166 (0%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHIDALL 277 +V + AGL + L +++ +G+ S +D +++ AP ST NVARWY ++ + Sbjct: 4 DVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYT 63 Query: 278 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 457 T G ++ + + Sbjct: 64 DAERKTWASAGGSAPAAAAADGDDFDLFGSDDEEEDAEKAKIV----------EERLAAY 113 Query: 458 XXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+W Sbjct: 114 AEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVW 159
>EF1D_XENLA (P29693) Elongation factor 1-delta (EF-1-delta) (P36)| Length = 265 Score = 58.2 bits (139), Expect = 2e-08 Identities = 23/31 (74%), Positives = 29/31 (93%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM KLEE VR+++M+GL+W Sbjct: 182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVW 212
>EF1D_RABIT (P53787) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 54.7 bits (130), Expect = 2e-07 Identities = 21/31 (67%), Positives = 28/31 (90%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM +LE VRS++++GL+W Sbjct: 197 ILLDVKPWDDETDMARLEACVRSVQLDGLVW 227
>EF1D_MOUSE (P57776) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 54.7 bits (130), Expect = 2e-07 Identities = 22/31 (70%), Positives = 28/31 (90%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM +LE VRSI+++GL+W Sbjct: 197 ILLDVKPWDDETDMAQLETCVRSIQLDGLVW 227
>EF1D_HUMAN (P29692) Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4)| Length = 280 Score = 54.7 bits (130), Expect = 2e-07 Identities = 22/31 (70%), Positives = 28/31 (90%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLDVKPWDDETDM +LE VRSI+++GL+W Sbjct: 197 ILLDVKPWDDETDMAQLEACVRSIQLDGLVW 227
>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)| Length = 213 Score = 53.9 bits (128), Expect = 3e-07 Identities = 42/162 (25%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Frame = +2 Query: 122 LKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK----LSG 289 +K L+ +L +SYI G A++ D+ VY F P RW+NHI + + L Sbjct: 12 IKSLNEFLADKSYIDGTTATQADVTVYKAFQKEFPQ----FTRWFNHIASFTEEFEDLPA 67 Query: 290 VTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXXXXX 469 AP ++ E Sbjct: 68 GKAPAASGSAAAAAEEEDDEDVDLFGSDDEVDEEAEKL---------KQQRLAEYAAKKA 118 Query: 470 XXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V LDVKPWDDETD+ +L V++I+MEGL W Sbjct: 119 AKGPKPAAKSIVTLDVKPWDDETDLDELLTNVKAIEMEGLTW 160
>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2| (EF-1-beta/delta 2) Length = 262 Score = 52.8 bits (125), Expect = 8e-07 Identities = 21/31 (67%), Positives = 29/31 (93%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+W Sbjct: 178 VILDVKPWDDETDLGEMEKLVRSIEMDGLVW 208
>EF1D_ARTSA (P32192) Elongation factor 1-delta (EF-1-delta)| Length = 237 Score = 52.4 bits (124), Expect = 1e-06 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +LLD+KPWDDETDM +E VRSI M+GL+W Sbjct: 154 ILLDIKPWDDETDMGAMEREVRSIAMDGLIW 184
>EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) (Translation| elongation factor 1B alpha) (Eukaryotic elongation factor 1Balpha) (eEF1Balpha) Length = 205 Score = 51.2 bits (121), Expect = 2e-06 Identities = 40/165 (24%), Positives = 58/165 (35%), Gaps = 7/165 (4%) Frame = +2 Query: 122 LKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLKLSGVTAP 301 LK+L+ L +SYI G S+ D+ V+ F A P +RW+NH Sbjct: 11 LKQLNASLADKSYIEGTAVSQADVTVFKAFQSAYPE----FSRWFNH------------- 53 Query: 302 GQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXXXXXXXXX 481 ++S E + LF Sbjct: 54 ------IASKADEFDSFPAASAAAAEEEEDDDVDLFGSDDEEADAEAEKLKAERIAAYNA 107 Query: 482 XXXXX-------XXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 V LDVKPWDDET++ ++ V++I+MEGL W Sbjct: 108 KKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTW 152
>SYC_MOUSE (Q9ER72) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 831 Score = 48.9 bits (115), Expect = 1e-05 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = +2 Query: 116 AGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHIDALL 277 A ++ LD +L +RSYI GY S+ D+ V+ + S P S +VARW+ HI+ALL Sbjct: 23 ARVQALDQHLSTRSYIQGYSLSQADVDVFRQLSAPPADSRLFHVARWFRHIEALL 77
>EF1D_DROME (Q9VL18) Probable elongation factor 1-delta (EF-1-delta)| Length = 256 Score = 47.4 bits (111), Expect = 3e-05 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = +2 Query: 503 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 ++LDVKPWDDETD+ +E +R I +GLLW Sbjct: 173 IILDVKPWDDETDLKVMETEIRKITQDGLLW 203
>EF1B_TRYCR (P34827) 25 kDa elongation factor 1-beta (EF-1-beta)| Length = 222 Score = 42.4 bits (98), Expect = 0.001 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 6/171 (3%) Frame = +2 Query: 101 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 280 +VN +G +L+G L + ++ G + SK+D+ ++++ A T++ W H+ + + Sbjct: 5 DVNKRSG--ELEGKLKGKLFLGGTKPSKEDVKLFNDLLGAEN---TSLYLWVKHMTSFTE 59 Query: 281 LSGVTAPGQGVKVLS----SIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXX 448 A G VKV + S + + LF Sbjct: 60 AER-KAWGAPVKVTATTSASAPAKQAPKKAASAPAKQADEDEEIDLFGEATEEETAALEA 118 Query: 449 XXXXXXXXXXXXXX--XXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLW 595 +L DVKPWDD D+ L + ++K +GLLW Sbjct: 119 KKKKDTDAKKAKKEVIAKSSILFDVKPWDDTVDLQALANKLHAVKRDGLLW 169
>ZN33A_HUMAN (Q06730) Zinc finger protein 33A (Zinc finger protein KOX31) (Zinc| finger and ZAK-associated protein with KRAB domain) (ZZaPK) Length = 810 Score = 32.0 bits (71), Expect = 1.4 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -3 Query: 335 GQLMTEPSHLDQGQ*LHSASGAHQCDCTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRCS 156 G+ E SHL + Q +H+ QC+ W KS + Q SH + + Sbjct: 334 GKAFWEKSHLTRHQRVHTGQKPFQCNECEKAFWDKS-----NLTKHQRSHTGEKPFECNE 388 Query: 155 CGTEGSHQAF*GLPQR*H 102 CG SH++ L QR H Sbjct: 389 CGKAFSHKSALTLHQRTH 406
>ZN11B_HUMAN (Q06732) Zinc finger protein 11B| Length = 778 Score = 31.2 bits (69), Expect = 2.4 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -3 Query: 335 GQLMTEPSHLDQGQ*LHSASGAHQCDCTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRCS 156 G+ E SHL + Q +H+ QC+ W KS + Q SH + + Sbjct: 335 GKAFWEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKS-----NLTKHQRSHTGEKPFECNE 389 Query: 155 CGTEGSHQAF*GLPQR*H 102 CG SH++ L QR H Sbjct: 390 CGKAFSHKSALTLHQRTH 407
>GSTT3_DROME (Q9VG97) Glutathione S-transferase D3 (EC 2.5.1.18) (DmGST22)| Length = 199 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%) Frame = +2 Query: 131 LDGYLLSRSYISGYQASKDDLAVY---SEFSVA--PPSTCTNVARWYNHI 265 L+ +L + Y++G Q + D+A+ S F V S NVARWY+H+ Sbjct: 121 LNTFLEGQDYVAGDQYTVADIAILANVSNFDVVGFDISKYPNVARWYDHV 170
>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 9) (ADAM-TS 9) (ADAM-TS9) Length = 1935 Score = 30.8 bits (68), Expect = 3.1 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 211 LSCSTIDLHQCCKVVQSH*CAPEAEWSYCPWSRCEGS 321 LSC +D + +H C +A WS PWS C S Sbjct: 1420 LSCEILDKPPDREQCNTHACPHDAAWSTGPWSSCSVS 1456
>ZN324_HUMAN (O75467) Zinc finger protein 324 (Zinc finger protein ZF5128)| Length = 553 Score = 29.6 bits (65), Expect = 6.9 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = -3 Query: 335 GQLMTEPSHLDQGQ*LHSASGAHQCD-CTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRC 159 G+ ++ SHL Q Q +HS + C C S+V RI + S RC Sbjct: 291 GKAFSQTSHLTQHQRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSF-------RC 343 Query: 158 S-CGTEGSH 135 S CG SH Sbjct: 344 SECGKAFSH 352
>HGF_RAT (P17945) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 274 PEAEWSYCPWSRCEGSVINCP*NLNY 351 P W YCP SRCEG NL++ Sbjct: 458 PLVPWDYCPISRCEGDTTPTIVNLDH 483
>HGF_MOUSE (Q08048) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 274 PEAEWSYCPWSRCEGSVINCP*NLNY 351 P W YCP SRCEG NL++ Sbjct: 458 PLIPWDYCPISRCEGDTTPTIVNLDH 483
>HGF_HUMAN (P14210) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 274 PEAEWSYCPWSRCEGSVINCP*NLNY 351 P W YCP SRCEG NL++ Sbjct: 457 PLIPWDYCPISRCEGDTTPTIVNLDH 482 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,245,361 Number of Sequences: 219361 Number of extensions: 1290677 Number of successful extensions: 3725 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3565 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3712 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
