ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
2ref|XM_474331.1| Oryza sativa (japonica cultivar-group), predic... 220 4e-54
3emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,... 220 4e-54
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
5emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 220 4e-54
6emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 220 4e-54
7gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str... 113 6e-22
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
9dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
10gb|AY109399.1| Zea mays CL499_1 mRNA sequence 86 1e-13
11ref|XM_550363.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
12dbj|AK101686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
13gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
14gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
16dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
19dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
20ref|NM_102238.2| Arabidopsis thaliana GAMMA-ADAPTIN 1 (GAMMA-ADA... 46 0.12
21ref|NM_179370.2| Arabidopsis thaliana GAMMA-ADAPTIN 1 (GAMMA-ADA... 46 0.12
22emb|AJ133777.1|ATH133777 Arabidopsis thaliana mRNA for gamma-ada... 46 0.12
23gb|BT005557.1| Arabidopsis thaliana clone U50014 putative gamma-... 46 0.12
24gb|BT004307.1| Arabidopsis thaliana clone RAFL16-01-N23 (R50014)... 46 0.12
25gb|AF124524.1|AF124524 Arabidopsis thaliana gamma-adaptin 1 gene... 46 0.12
26gb|AF061286.1|AF061286 Arabidopsis thaliana gamma-adaptin 1 mRNA... 46 0.12
27gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 44 0.48
28dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.48
29ref|XM_472408.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
30gb|AY342320.1| Oryza sativa (indica cultivar-group) cell wall in... 42 1.9
31emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
32gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-wall ... 42 1.9
33gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome... 42 1.9
34gb|AY220486.1| Oryza sativa (indica cultivar-group) apoplastic i... 42 1.9
35dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
36emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chr... 42 1.9
37gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome... 40 7.5
38gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosom... 40 7.5
39gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosom... 40 7.5
40gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome... 40 7.5
41gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome... 40 7.5
42gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosom... 40 7.5
43gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosom... 40 7.5
44gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosom... 40 7.5
45gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome... 40 7.5
46gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosom... 40 7.5
47gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mR... 40 7.5
48emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 7.5
49gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome ... 40 7.5
50gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosom... 40 7.5
51gb|AC182454.2| Mus musculus BAC clone RP24-141G12 from chromosom... 40 7.5
52gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, comp... 40 7.5
53gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosom... 40 7.5
54gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosom... 40 7.5
55gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, co... 40 7.5
56gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosom... 40 7.5
57dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, ... 40 7.5
58dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, ... 40 7.5
59emb|Z21955.1|MXCRTNODA M.xanthus carotenoid gene cluster 40 7.5
60gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cance... 40 7.5
61emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.5
62gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, com... 40 7.5
63emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on ch... 40 7.5
64gb|AC145585.4| Mus musculus BAC clone RP24-167E2 from Y, complet... 40 7.5
65gb|AC145601.4| Mus musculus BAC clone RP24-229P8 from Y, complet... 40 7.5
66gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 7.5 
>dbj|AK071884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047F12, full
            insert sequence
          Length = 3763

 Score =  254 bits (128), Expect = 3e-64
 Identities = 255/296 (86%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                        
Query: 262  aagatatgttgctctgaacatacttatgacggc-attatagtagatacacaagcagtaca 320
            |||||| |||||||||||||| ||||||| ||| ||||  ||||||||||| ||||||||
Sbjct: 1190 aagatacgttgctctgaacatgcttatgagggccattactgtagatacacaggcagtaca 1249

                                                                        
Query: 321  gaggcacagggtgtcaatattggagtgtgtaaaggatgccgatgcccccattcgcaaaag 380
            ||| ||||||  | ||||||||||||||||||||||||| |||||  | |||||||| ||
Sbjct: 1250 gagacacaggacgacaatattggagtgtgtaaaggatgcagatgcttctattcgcaagag 1309

                                                                        
Query: 381  ggccctagaacttgtttatttgttggtcaatgatactaatgtaaagctactgaccaaaaa 440
            |||||| |||||||||| |||||| ||||| ||||| ||||||||||   |||| ||| |
Sbjct: 1310 ggcccttgaacttgtttttttgttagtcaacgatacaaatgtaaagcctttgactaaaga 1369

                                                                        
Query: 441  gcttgtcgactacttgaaagtagctaatccagacttcaaagaagatctcagagccaagat 500
            |||||||||||||||  |   |||| |||| || ||||||||||||||||  ||||||||
Sbjct: 1370 gcttgtcgactacttagattcagctgatccggatttcaaagaagatctcactgccaagat 1429

                                                                    
Query: 501  atgctctatggctgaaaagttttctcaagaaaagttatggtatcttgatcagatgt 556
            |||||| || | |||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1430 atgctcaatagttgaaaagttttctcaagagaagttatggtaccttgatcagatgt 1485
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>ref|XM_474331.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 14001

 Score =  220 bits (111), Expect = 4e-54
 Identities = 216/251 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccggagggcaccaccgcgctgcgggagctcatccagaacaccgatgacacaggggcctcg 60
           ||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||| || 
Sbjct: 85  ccggagggcaccaccgcgctgcgggagctcatccagaacgccgacgacgcgggggcgtcc 144

                                                                       
Query: 61  cgggtcctcctctgccttgaccgccgcgcccacggctcctactcgctgctcggcccggcg 120
           || |||| ||||||||| ||||||||||| |||||| |   |||||||||||  || || 
Sbjct: 145 cgcgtccgcctctgcctcgaccgccgcgcgcacggcgcaggctcgctgctcgcgcccgcc 204

                                                                       
Query: 121 ctcgcgcaatggcagggccccgccctgctcgcccacaatgacgccgccttcaccgacaac 180
           |||||||||||||||||||| ||  |||||||| |||| ||||||| |||||||||| | 
Sbjct: 205 ctcgcgcaatggcagggcccggcgttgctcgcctacaacgacgccgtcttcaccgacgag 264

                                                                       
Query: 181 gacttcgccagcatctcccgcatcggcggcagcaagaaggcctcctaggcatggaagacc 240
           ||||||||||| |||||||||||||| | ||||| |||||  ||| |||  |||||||||
Sbjct: 265 gacttcgccagtatctcccgcatcggggacagcaggaaggtgtcccaggtctggaagacc 324

                      
Query: 241 ggccgcttcgg 251
           |||||||||||
Sbjct: 325 ggccgcttcgg 335
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>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
              complete sequence
          Length = 164943

 Score =  220 bits (111), Expect = 4e-54
 Identities = 216/251 (86%)
 Strand = Plus / Plus

                                                                          
Query: 1      ccggagggcaccaccgcgctgcgggagctcatccagaacaccgatgacacaggggcctcg 60
              ||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||| || 
Sbjct: 121657 ccggagggcaccaccgcgctgcgggagctcatccagaacgccgacgacgcgggggcgtcc 121716

                                                                          
Query: 61     cgggtcctcctctgccttgaccgccgcgcccacggctcctactcgctgctcggcccggcg 120
              || |||| ||||||||| ||||||||||| |||||| |   |||||||||||  || || 
Sbjct: 121717 cgcgtccgcctctgcctcgaccgccgcgcgcacggcgcaggctcgctgctcgcgcccgcc 121776

                                                                          
Query: 121    ctcgcgcaatggcagggccccgccctgctcgcccacaatgacgccgccttcaccgacaac 180
              |||||||||||||||||||| ||  |||||||| |||| ||||||| |||||||||| | 
Sbjct: 121777 ctcgcgcaatggcagggcccggcgttgctcgcctacaacgacgccgtcttcaccgacgag 121836

                                                                          
Query: 181    gacttcgccagcatctcccgcatcggcggcagcaagaaggcctcctaggcatggaagacc 240
              ||||||||||| |||||||||||||| | ||||| |||||  ||| |||  |||||||||
Sbjct: 121837 gacttcgccagtatctcccgcatcggggacagcaggaaggtgtcccaggtctggaagacc 121896

                         
Query: 241    ggccgcttcgg 251
              |||||||||||
Sbjct: 121897 ggccgcttcgg 121907
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  220 bits (111), Expect = 4e-54
 Identities = 216/251 (86%)
 Strand = Plus / Plus

                                                                            
Query: 1        ccggagggcaccaccgcgctgcgggagctcatccagaacaccgatgacacaggggcctcg 60
                ||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||| || 
Sbjct: 34504171 ccggagggcaccaccgcgctgcgggagctcatccagaacgccgacgacgcgggggcgtcc 34504230

                                                                            
Query: 61       cgggtcctcctctgccttgaccgccgcgcccacggctcctactcgctgctcggcccggcg 120
                || |||| ||||||||| ||||||||||| |||||| |   |||||||||||  || || 
Sbjct: 34504231 cgcgtccgcctctgcctcgaccgccgcgcgcacggcgcaggctcgctgctcgcgcccgcc 34504290

                                                                            
Query: 121      ctcgcgcaatggcagggccccgccctgctcgcccacaatgacgccgccttcaccgacaac 180
                |||||||||||||||||||| ||  |||||||| |||| ||||||| |||||||||| | 
Sbjct: 34504291 ctcgcgcaatggcagggcccggcgttgctcgcctacaacgacgccgtcttcaccgacgag 34504350

                                                                            
Query: 181      gacttcgccagcatctcccgcatcggcggcagcaagaaggcctcctaggcatggaagacc 240
                ||||||||||| |||||||||||||| | ||||| |||||  ||| |||  |||||||||
Sbjct: 34504351 gacttcgccagtatctcccgcatcggggacagcaggaaggtgtcccaggtctggaagacc 34504410

                           
Query: 241      ggccgcttcgg 251
                |||||||||||
Sbjct: 34504411 ggccgcttcgg 34504421



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 160      gacgccgccttcaccgacaacgact 184
                |||||||||||| ||||||||||||
Sbjct: 20422497 gacgccgccttccccgacaacgact 20422521
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>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete
              sequence
          Length = 138387

 Score =  220 bits (111), Expect = 4e-54
 Identities = 216/251 (86%)
 Strand = Plus / Plus

                                                                          
Query: 1      ccggagggcaccaccgcgctgcgggagctcatccagaacaccgatgacacaggggcctcg 60
              ||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||| || 
Sbjct: 129959 ccggagggcaccaccgcgctgcgggagctcatccagaacgccgacgacgcgggggcgtcc 130018

                                                                          
Query: 61     cgggtcctcctctgccttgaccgccgcgcccacggctcctactcgctgctcggcccggcg 120
              || |||| ||||||||| ||||||||||| |||||| |   |||||||||||  || || 
Sbjct: 130019 cgcgtccgcctctgcctcgaccgccgcgcgcacggcgcaggctcgctgctcgcgcccgcc 130078

                                                                          
Query: 121    ctcgcgcaatggcagggccccgccctgctcgcccacaatgacgccgccttcaccgacaac 180
              |||||||||||||||||||| ||  |||||||| |||| ||||||| |||||||||| | 
Sbjct: 130079 ctcgcgcaatggcagggcccggcgttgctcgcctacaacgacgccgtcttcaccgacgag 130138

                                                                          
Query: 181    gacttcgccagcatctcccgcatcggcggcagcaagaaggcctcctaggcatggaagacc 240
              ||||||||||| |||||||||||||| | ||||| |||||  ||| |||  |||||||||
Sbjct: 130139 gacttcgccagtatctcccgcatcggggacagcaggaaggtgtcccaggtctggaagacc 130198

                         
Query: 241    ggccgcttcgg 251
              |||||||||||
Sbjct: 130199 ggccgcttcgg 130209
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>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete
             sequence
          Length = 104146

 Score =  220 bits (111), Expect = 4e-54
 Identities = 216/251 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1     ccggagggcaccaccgcgctgcgggagctcatccagaacaccgatgacacaggggcctcg 60
             ||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||| || 
Sbjct: 40292 ccggagggcaccaccgcgctgcgggagctcatccagaacgccgacgacgcgggggcgtcc 40351

                                                                         
Query: 61    cgggtcctcctctgccttgaccgccgcgcccacggctcctactcgctgctcggcccggcg 120
             || |||| ||||||||| ||||||||||| |||||| |   |||||||||||  || || 
Sbjct: 40352 cgcgtccgcctctgcctcgaccgccgcgcgcacggcgcaggctcgctgctcgcgcccgcc 40411

                                                                         
Query: 121   ctcgcgcaatggcagggccccgccctgctcgcccacaatgacgccgccttcaccgacaac 180
             |||||||||||||||||||| ||  |||||||| |||| ||||||| |||||||||| | 
Sbjct: 40412 ctcgcgcaatggcagggcccggcgttgctcgcctacaacgacgccgtcttcaccgacgag 40471

                                                                         
Query: 181   gacttcgccagcatctcccgcatcggcggcagcaagaaggcctcctaggcatggaagacc 240
             ||||||||||| |||||||||||||| | ||||| |||||  ||| |||  |||||||||
Sbjct: 40472 gacttcgccagtatctcccgcatcggggacagcaggaaggtgtcccaggtctggaagacc 40531

                        
Query: 241   ggccgcttcgg 251
             |||||||||||
Sbjct: 40532 ggccgcttcgg 40542
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>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0049O12, from chromosome 2, complete sequence
          Length = 155154

 Score =  113 bits (57), Expect = 6e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                          
Query: 353    aggatgccgatgcccccattcgcaaaagggccctagaacttgtttatttgttggtcaatg 412
              ||||||| |||||  | |||||||| |||||||| |||||||||| |||||| ||||| |
Sbjct: 145687 aggatgcagatgcttctattcgcaagagggcccttgaacttgtttttttgttagtcaacg 145746

                                                                          
Query: 413    atactaatgtaaagctactgaccaaaaagcttgtcgactacttgaaagtagctaatccag 472
              |||| ||||||||||   |||| ||| ||||||||||||||||  |   |||| |||| |
Sbjct: 145747 atacaaatgtaaagcctttgactaaagagcttgtcgactacttagattcagctgatccgg 145806

                                                               
Query: 473    acttcaaagaagatctcagagccaagatatgctctatggctgaaaagtt 521
              | ||||||||||||||||  |||||||||||||| || | |||||||||
Sbjct: 145807 atttcaaagaagatctcactgccaagatatgctcaatagttgaaaagtt 145855



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 83/94 (88%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                          
Query: 263    agatatgttgctctgaacatacttatgacggc-attatagtagatacacaagcagtacag 321
              ||||| |||||||||||||| ||||||| ||| ||||  ||||||||||| |||||||||
Sbjct: 145133 agatacgttgctctgaacatgcttatgagggccattactgtagatacacaggcagtacag 145192

                                                
Query: 322    aggcacagggtgtcaatattggagtgtgtaaagg 355
              || ||||||  | |||||||||||||||||||||
Sbjct: 145193 agacacaggacgacaatattggagtgtgtaaagg 145226



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 519    gttttctcaagaaaagttatggtatcttgatcagatgt 556
              |||||||||||| ||||||||||| |||||||||||||
Sbjct: 145932 gttttctcaagagaagttatggtaccttgatcagatgt 145969
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  113 bits (57), Expect = 6e-22
 Identities = 141/169 (83%)
 Strand = Plus / Minus

                                                                            
Query: 353      aggatgccgatgcccccattcgcaaaagggccctagaacttgtttatttgttggtcaatg 412
                ||||||| |||||  | |||||||| |||||||| |||||||||| |||||| ||||| |
Sbjct: 34359419 aggatgcagatgcttctattcgcaagagggcccttgaacttgtttttttgttagtcaacg 34359360

                                                                            
Query: 413      atactaatgtaaagctactgaccaaaaagcttgtcgactacttgaaagtagctaatccag 472
                |||| ||||||||||   |||| ||| ||||||||||||||||  |   |||| |||| |
Sbjct: 34359359 atacaaatgtaaagcctttgactaaagagcttgtcgactacttagattcagctgatccgg 34359300

                                                                 
Query: 473      acttcaaagaagatctcagagccaagatatgctctatggctgaaaagtt 521
                | ||||||||||||||||  |||||||||||||| || | |||||||||
Sbjct: 34359299 atttcaaagaagatctcactgccaagatatgctcaatagttgaaaagtt 34359251



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 83/94 (88%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                            
Query: 263      agatatgttgctctgaacatacttatgacggc-attatagtagatacacaagcagtacag 321
                ||||| |||||||||||||| ||||||| ||| ||||  ||||||||||| |||||||||
Sbjct: 34359973 agatacgttgctctgaacatgcttatgagggccattactgtagatacacaggcagtacag 34359914

                                                  
Query: 322      aggcacagggtgtcaatattggagtgtgtaaagg 355
                || ||||||  | |||||||||||||||||||||
Sbjct: 34359913 agacacaggacgacaatattggagtgtgtaaagg 34359880



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 519      gttttctcaagaaaagttatggtatcttgatcagatgt 556
                |||||||||||| ||||||||||| |||||||||||||
Sbjct: 34359174 gttttctcaagagaagttatggtaccttgatcagatgt 34359137
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>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1548_F12
          Length = 118814

 Score =  113 bits (57), Expect = 6e-22
 Identities = 141/169 (83%)
 Strand = Plus / Minus

                                                                         
Query: 353   aggatgccgatgcccccattcgcaaaagggccctagaacttgtttatttgttggtcaatg 412
             ||||||| |||||  | |||||||| |||||||| |||||||||| |||||| ||||| |
Sbjct: 57066 aggatgcagatgcttctattcgcaagagggcccttgaacttgtttttttgttagtcaacg 57007

                                                                         
Query: 413   atactaatgtaaagctactgaccaaaaagcttgtcgactacttgaaagtagctaatccag 472
             |||| ||||||||||   |||| ||| ||||||||||||||||  |   |||| |||| |
Sbjct: 57006 atacaaatgtaaagcctttgactaaagagcttgtcgactacttagattcagctgatccgg 56947

                                                              
Query: 473   acttcaaagaagatctcagagccaagatatgctctatggctgaaaagtt 521
             | ||||||||||||||||  |||||||||||||| || | |||||||||
Sbjct: 56946 atttcaaagaagatctcactgccaagatatgctcaatagttgaaaagtt 56898



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 83/94 (88%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                         
Query: 263   agatatgttgctctgaacatacttatgacggc-attatagtagatacacaagcagtacag 321
             ||||| |||||||||||||| ||||||| ||| ||||  ||||||||||| |||||||||
Sbjct: 57620 agatacgttgctctgaacatgcttatgagggccattactgtagatacacaggcagtacag 57561

                                               
Query: 322   aggcacagggtgtcaatattggagtgtgtaaagg 355
             || ||||||  | |||||||||||||||||||||
Sbjct: 57560 agacacaggacgacaatattggagtgtgtaaagg 57527



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 519   gttttctcaagaaaagttatggtatcttgatcagatgt 556
             |||||||||||| ||||||||||| |||||||||||||
Sbjct: 56821 gttttctcaagagaagttatggtaccttgatcagatgt 56784
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>gb|AY109399.1| Zea mays CL499_1 mRNA sequence
          Length = 2962

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 137/167 (82%), Gaps = 1/167 (0%)
 Strand = Plus / Plus

                                                                        
Query: 262  aagatatgttgctctgaacatacttatgacggc-attatagtagatacacaagcagtaca 320
            |||||||||||| || ||||| ||||||| ||| |||   ||||| |||||||| || ||
Sbjct: 1194 aagatatgttgccctaaacatgcttatgaaggccattgctgtagacacacaagcggtgca 1253

                                                                        
Query: 321  gaggcacagggtgtcaatattggagtgtgtaaaggatgccgatgcccccattcgcaaaag 380
            |||||||||||   ||||||| |||||||| |||||||| ||||   | ||||| |||||
Sbjct: 1254 gaggcacagggcaacaatattagagtgtgtcaaggatgcagatgtttctattcgtaaaag 1313

                                                           
Query: 381  ggccctagaacttgtttatttgttggtcaatgatactaatgtaaagc 427
            |||||| |||||||||||  |  | ||||| ||||| ||||||||||
Sbjct: 1314 ggccctggaacttgtttacctacttgtcaacgatacaaatgtaaagc 1360
to top
>ref|XM_550363.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3082

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 114/137 (83%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                        
Query: 263  agatatgttgctctgaacatacttatgacggcattatag-tagatacacaagcagtacag 321
            |||||||||||||||||||| ||||||| |||  |  || |||| || |||||||| |||
Sbjct: 1186 agatatgttgctctgaacatgcttatgaaggccatggaggtagacacgcaagcagtgcag 1245

                                                                        
Query: 322  aggcacagggtgtcaatattggagtgtgtaaaggatgccgatgcccccattcgcaaaagg 381
            ||||| || |   ||||||| |||||||| |||||||| ||||   | ||||||||||||
Sbjct: 1246 aggcatagagcaacaatattagagtgtgtcaaggatgctgatgtatctattcgcaaaagg 1305

                             
Query: 382  gccctagaacttgttta 398
            ||||| |||||||||||
Sbjct: 1306 gcccttgaacttgttta 1322



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 472  gacttcaaagaagatctcagagccaagatatgctctatggctgaaaagttttctcaaga 530
            |||||||| || || |||| ||| ||||||||||| || | |||||||||||| |||||
Sbjct: 1396 gacttcaaggacgacctcacagcaaagatatgctcaattgttgaaaagttttcccaaga 1454
to top
>dbj|AK101686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058P13, full
            insert sequence
          Length = 3082

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 114/137 (83%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                        
Query: 263  agatatgttgctctgaacatacttatgacggcattatag-tagatacacaagcagtacag 321
            |||||||||||||||||||| ||||||| |||  |  || |||| || |||||||| |||
Sbjct: 1186 agatatgttgctctgaacatgcttatgaaggccatggaggtagacacgcaagcagtgcag 1245

                                                                        
Query: 322  aggcacagggtgtcaatattggagtgtgtaaaggatgccgatgcccccattcgcaaaagg 381
            ||||| || |   ||||||| |||||||| |||||||| ||||   | ||||||||||||
Sbjct: 1246 aggcatagagcaacaatattagagtgtgtcaaggatgctgatgtatctattcgcaaaagg 1305

                             
Query: 382  gccctagaacttgttta 398
            ||||| |||||||||||
Sbjct: 1306 gcccttgaacttgttta 1322



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 472  gacttcaaagaagatctcagagccaagatatgctctatggctgaaaagttttctcaaga 530
            |||||||| || || |||| ||| ||||||||||| || | |||||||||||| |||||
Sbjct: 1396 gacttcaaggacgacctcacagcaaagatatgctcaattgttgaaaagttttcccaaga 1454
to top
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0067H15, complete sequence
          Length = 184316

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 4     gagggcaccaccgcgctgcgggagctcatccagaacaccga 44
             ||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 12477 gagggcaccaccgtgctgcgggagctcatccagaactccga 12437
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11,
              complete sequence
          Length = 148753

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                       
Query: 4      gagggcaccaccgcgctgcgggagctcatccagaacaccga 44
              ||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 118508 gagggcaccaccgtgctgcgggagctcatccagaactccga 118468
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                        
Query: 4       gagggcaccaccgcgctgcgggagctcatccagaacaccga 44
               ||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 6887554 gagggcaccaccgtgctgcgggagctcatccagaactccga 6887514
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 1        ccggagggcaccaccgcgctgcgggagctcatccagaacaccga 44
                ||||||||||| ||| |||||| |||||||||||||||| ||||
Sbjct: 11705591 ccggagggcacaaccacgctgcaggagctcatccagaacgccga 11705548
to top
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 1      ccggagggcaccaccgcgctgcgggagctcatccagaacaccga 44
              ||||||||||| ||| |||||| |||||||||||||||| ||||
Sbjct: 140225 ccggagggcacaaccacgctgcaggagctcatccagaacgccga 140182
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 370     attcgcaaaagggccctagaacttgttta 398
               ||||||||||||||||| |||||||||||
Sbjct: 3380038 attcgcaaaagggcccttgaacttgttta 3380066



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 263     agatatgttgctctgaacatacttatga 290
               |||||||||||||||||||| |||||||
Sbjct: 3379507 agatatgttgctctgaacatgcttatga 3379534
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
             P0680A03
          Length = 156054

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 370   attcgcaaaagggccctagaacttgttta 398
             ||||||||||||||||| |||||||||||
Sbjct: 71592 attcgcaaaagggcccttgaacttgttta 71620



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 263   agatatgttgctctgaacatacttatga 290
             |||||||||||||||||||| |||||||
Sbjct: 71061 agatatgttgctctgaacatgcttatga 71088
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>ref|NM_102238.2| Arabidopsis thaliana GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); clathrin
            binding AT1G23900 (GAMMA-ADAPTIN 1) transcript variant
            AT1G23900.1 mRNA, complete cds
          Length = 3141

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1379 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1421
to top
>ref|NM_179370.2| Arabidopsis thaliana GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); clathrin
            binding AT1G23900 (GAMMA-ADAPTIN 1) transcript variant
            AT1G23900.2 mRNA, complete cds
          Length = 3211

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1449 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1491
to top
>emb|AJ133777.1|ATH133777 Arabidopsis thaliana mRNA for gamma-adaptin 2
          Length = 3100

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1371 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1413
to top
>gb|BT005557.1| Arabidopsis thaliana clone U50014 putative gamma-adaptin (At1g23900)
            mRNA, complete cds
          Length = 2662

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1236 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1278
to top
>gb|BT004307.1| Arabidopsis thaliana clone RAFL16-01-N23 (R50014) putative
            gamma-adaptin (At1g23900) mRNA, complete cds
          Length = 3236

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1452 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1494
to top
>gb|AF124524.1|AF124524 Arabidopsis thaliana gamma-adaptin 1 gene, complete cds
          Length = 7510

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 3750 tgaaaagttttctccagaaaaactatggtacattgatcagatg 3792
to top
>gb|AF061286.1|AF061286 Arabidopsis thaliana gamma-adaptin 1 mRNA, complete cds
          Length = 3213

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 513  tgaaaagttttctcaagaaaagttatggtatcttgatcagatg 555
            |||||||||||||| ||||||  |||||||  |||||||||||
Sbjct: 1386 tgaaaagttttctccagaaaaactatggtacattgatcagatg 1428
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 261   gaagatatgttgctctgaacatactt 286
             |||||||| |||||||||||||||||
Sbjct: 76644 gaagatattttgctctgaacatactt 76669
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>dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16I03, TM0056,
             complete sequence
          Length = 102883

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 370   attcgcaaaagggccctagaacttgtttatttgttggtcaatgatactaatgtaaagc 427
             ||||| ||||||||||| |||||||||||  |  |||| ||||| |||||||| ||||
Sbjct: 71325 attcggaaaagggcccttgaacttgtttacgttctggtgaatgaaactaatgtgaagc 71268
to top
>ref|XM_472408.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 160 gacgccgccttcaccgacaacgact 184
           |||||||||||| ||||||||||||
Sbjct: 898 gacgccgccttccccgacaacgact 922
to top
>gb|AY342320.1| Oryza sativa (indica cultivar-group) cell wall invertase 3 (CIN3)
           mRNA, complete cds
          Length = 1761

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 160 gacgccgccttcaccgacaacgact 184
           |||||||||||| ||||||||||||
Sbjct: 907 gacgccgccttccccgacaacgact 931
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>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13,
             complete sequence
          Length = 113960

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 160   gacgccgccttcaccgacaacgact 184
             |||||||||||| ||||||||||||
Sbjct: 35917 gacgccgccttccccgacaacgact 35941
to top
>gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 3 mRNA,
           complete cds
          Length = 1911

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 160 gacgccgccttcaccgacaacgact 184
           |||||||||||| ||||||||||||
Sbjct: 934 gacgccgccttccccgacaacgact 958
to top
>gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome 13, complete sequence
          Length = 194915

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 33    ccagaacaccgatgacacaggggcc 57
             ||||| |||||||||||||||||||
Sbjct: 34005 ccagaccaccgatgacacaggggcc 34029
to top
>gb|AY220486.1| Oryza sativa (indica cultivar-group) apoplastic invertase (INV4)
            gene, complete cds
          Length = 3848

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 160  gacgccgccttcaccgacaacgact 184
            |||||||||||| ||||||||||||
Sbjct: 2194 gacgccgccttccccgacaacgact 2218
to top
>dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M11, full
           insert sequence
          Length = 2289

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 160 gacgccgccttcaccgacaacgact 184
           |||||||||||| ||||||||||||
Sbjct: 968 gacgccgccttccccgacaacgact 992
to top
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete
             sequence
          Length = 157729

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 512   ctgaaaagttttctcaagaaa 532
             |||||||||||||||||||||
Sbjct: 88890 ctgaaaagttttctcaagaaa 88910
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>gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome Y, complete sequence
          Length = 147478

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 117436 ccagacttcaaagaagatct 117455
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>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence
          Length = 208700

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 102063 ccagacttcaaagaagatct 102044
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>gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosome y, complete sequence
          Length = 158633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 37049 ccagacttcaaagaagatct 37068
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>gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome y, complete sequence
          Length = 229858

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 94893 ccagacttcaaagaagatct 94874
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>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence
          Length = 162710

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 56081 ccagacttcaaagaagatct 56100
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>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete
            sequence
          Length = 199089

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  ccagacttcaaagaagatct 488
            ||||||||||||||||||||
Sbjct: 2708 ccagacttcaaagaagatct 2689
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>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence
          Length = 143221

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 41241 ccagacttcaaagaagatct 41260
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>gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosome Y, complete sequence
          Length = 155644

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 120687 ccagacttcaaagaagatct 120706
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>gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome Y, complete sequence
          Length = 186637

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 98280 ccagacttcaaagaagatct 98261
to top
>gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosome Y, complete sequence
          Length = 188188

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 183957 ccagacttcaaagaagatct 183938
to top
>gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mRNA, partial cds
          Length = 1142

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 474 cttcaaagaagatctcagag 493
           ||||||||||||||||||||
Sbjct: 97  cttcaaagaagatctcagag 78
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ggccccgccctgctcgccca 155
             ||||||||||||||||||||
Sbjct: 88528 ggccccgccctgctcgccca 88509
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>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence
          Length = 196032

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 142159 ccagacttcaaagaagatct 142140
to top
>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence
          Length = 174347

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 74882 ccagacttcaaagaagatct 74901
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>gb|AC182454.2| Mus musculus BAC clone RP24-141G12 from chromosome y, complete sequence
          Length = 181595

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 92444 ccagacttcaaagaagatct 92425
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>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence
          Length = 214702

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 340    ttggagtgtgtaaaggatgccgatgccc 367
              ||||||||||| |||||| |||||||||
Sbjct: 153988 ttggagtgtgtgaaggatcccgatgccc 154015
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>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence
          Length = 159477

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 22870 ccagacttcaaagaagatct 22889
to top
>gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosome y, complete sequence
          Length = 150838

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 26087 ccagacttcaaagaagatct 26106
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>gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, complete sequence
          Length = 185419

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 340   ttggagtgtgtaaaggatgccgatgccc 367
             ||||||||||| |||||| |||||||||
Sbjct: 23294 ttggagtgtgtgaaggatcccgatgccc 23321
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>gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosome y, complete sequence
          Length = 178464

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 141530 ccagacttcaaagaagatct 141549
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>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete
             sequences
          Length = 224098

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    ggcctcgcgggtcctcctctgcct 77
             ||||||||||||| ||||||||||
Sbjct: 53009 ggcctcgcgggtcgtcctctgcct 52986
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>dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, map 22, complete
             sequences
          Length = 102671

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    ggcctcgcgggtcctcctctgcct 77
             ||||||||||||| ||||||||||
Sbjct: 89880 ggcctcgcgggtcgtcctctgcct 89857
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>emb|Z21955.1|MXCRTNODA M.xanthus carotenoid gene cluster
          Length = 11979

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    ccggagggcaccaccgcgct 20
            ||||||||||||||||||||
Sbjct: 1320 ccggagggcaccaccgcgct 1301
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>gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162561

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 515    aaaagttttctcaagaaaagttat 538
              ||||||||||||||||||| ||||
Sbjct: 110686 aaaagttttctcaagaaaacttat 110709
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ccttgaccgccgcgcccacg 94
              ||||||||||||||||||||
Sbjct: 174421 ccttgaccgccgcgcccacg 174402
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>gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, complete sequence
          Length = 191444

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   acttcaaagaagatctcaga 492
             ||||||||||||||||||||
Sbjct: 88409 acttcaaagaagatctcaga 88428
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>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete
              sequence
          Length = 187999

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    ttgtttatttgttggtcaat 411
              ||||||||||||||||||||
Sbjct: 138441 ttgtttatttgttggtcaat 138460
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>gb|AC145585.4| Mus musculus BAC clone RP24-167E2 from Y, complete sequence
          Length = 156839

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    ccagacttcaaagaagatct 488
              ||||||||||||||||||||
Sbjct: 123515 ccagacttcaaagaagatct 123534
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>gb|AC145601.4| Mus musculus BAC clone RP24-229P8 from Y, complete sequence
          Length = 165064

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   ccagacttcaaagaagatct 488
             ||||||||||||||||||||
Sbjct: 25952 ccagacttcaaagaagatct 25933
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    tttatttgttggtcaatgatacta 418
              |||||||||||||||| |||||||
Sbjct: 830669 tttatttgttggtcaaagatacta 830646


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,436,105
Number of Sequences: 3902068
Number of extensions: 4436105
Number of successful extensions: 140218
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139804
Number of HSP's gapped (non-prelim): 405
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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