ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal13b04 |
|---|---|
| Clone Library Name | barley_pub |
>SMT3_ORYSA (P55857) Ubiquitin-like protein SMT3| Length = 100 Score = 179 bits (453), Expect = 6e-45 Identities = 86/92 (93%), Positives = 91/92 (98%), Gaps = 1/92 (1%) Frame = +1 Query: 139 DEDKKPAG-DGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 315 +EDKKPAG +GGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65 Query: 316 DGRRLRGEQTPDELEMEEGDEIDAMLHQTGGC 411 DGRRLRGEQTPDELEME+GDEIDAMLHQTGGC Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGGC 97
>SMT3_ARATH (P55852) Ubiquitin-like protein SMT3| Length = 100 Score = 166 bits (420), Expect = 4e-41 Identities = 83/90 (92%), Positives = 87/90 (96%) Frame = +1 Query: 139 DEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFD 318 +EDKKP GDGG AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFD Sbjct: 6 EEDKKP-GDGG-AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63 Query: 319 GRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 GRRLR EQTPDEL+ME+GDEIDAMLHQTGG Sbjct: 64 GRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
>PMT3_SCHPO (O13351) Ubiquitin-like protein pmt3/smt3 precursor| Length = 117 Score = 112 bits (281), Expect = 6e-25 Identities = 53/96 (55%), Positives = 71/96 (73%) Frame = +1 Query: 124 SGVTADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 303 +G T+ +D KP+ + HINLKV GQD NEVFF+IK++T+ KLM YC RQ +NS+ Sbjct: 21 TGDTSQQDVKPSTE----HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSL 76 Query: 304 AFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGGC 411 FL DG R+R +QTP EL+ME+GD+I+A+L Q GGC Sbjct: 77 RFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGGC 112
>SUMO3_MOUSE (Q9Z172) Small ubiquitin-related modifier 3 precursor (SUMO-3)| (Ubiquitin-like protein SMT3A) (SMT3 homolog 1) Length = 110 Score = 90.9 bits (224), Expect = 2e-18 Identities = 50/106 (47%), Positives = 62/106 (58%) Frame = +1 Query: 103 TEESPEMSGVTADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQ 282 +EE P+ GV + D HINLKV GQDG+ V F+IKR T L KLM AYC+RQ Sbjct: 2 SEEKPK-EGVKTEND----------HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQ 50 Query: 283 SVDLNSIAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGGCFRR 420 + + I F FDG+ + TP +LEME+ D ID QTGG R Sbjct: 51 GLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSASR 96
>SUMO3_HUMAN (P55854) Small ubiquitin-related modifier 3 precursor (SUMO-3)| (Ubiquitin-like protein SMT3A) (SMT3 homolog 1) Length = 103 Score = 90.5 bits (223), Expect = 3e-18 Identities = 49/102 (48%), Positives = 61/102 (59%) Frame = +1 Query: 103 TEESPEMSGVTADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQ 282 +EE P+ GV + D HINLKV GQDG+ V F+IKR T L KLM AYC+RQ Sbjct: 2 SEEKPK-EGVKTEND----------HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQ 50 Query: 283 SVDLNSIAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + + I F FDG+ + TP +LEME+ D ID QTGG Sbjct: 51 GLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
>SUMO2_RAT (P61959) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO2_PIG (P61958) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) (MIF2 suppressor) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO2_MOUSE (P61957) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO2_HUMAN (P61956) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) (HSMT3) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO2_CRIGR (Q6LDZ8) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) (MIF2 suppressor) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO2_BOVIN (P61955) Small ubiquitin-related modifier 2 precursor (SUMO-2)| (Ubiquitin-like protein SMT3B) (SMT3 homolog 2) (Sentrin-2) Length = 95 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID QTGG + Sbjct: 77 EMEDEDTIDVFQQQTGGVY 95
>SUMO1_PONPY (Q5R6J4) Small ubiquitin-related modifier 1 precursor (SUMO-1)| Length = 101 Score = 89.7 bits (221), Expect = 5e-18 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Frame = +1 Query: 136 ADEDKKPAGDG-----GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNS 300 +D++ KP+ + G +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS Sbjct: 2 SDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 61 Query: 301 IAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + FLF+G+R+ TP EL MEE D I+ QTGG Sbjct: 62 LRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
>SUMO1_MOUSE (P63166) Small ubiquitin-related modifier 1 precursor (SUMO-1)| (Ubiquitin-like protein SMT3C) (SMT3 homolog 3) (Ubiquitin-homology domain protein PIC1) Length = 101 Score = 89.7 bits (221), Expect = 5e-18 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Frame = +1 Query: 136 ADEDKKPAGDG-----GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNS 300 +D++ KP+ + G +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS Sbjct: 2 SDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 61 Query: 301 IAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + FLF+G+R+ TP EL MEE D I+ QTGG Sbjct: 62 LRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
>SUMO1_HUMAN (P63165) Small ubiquitin-related modifier 1 precursor (SUMO-1)| (Ubiquitin-like protein SMT3C) (SMT3 homolog 3) (Ubiquitin-homology domain protein PIC1) (Ubiquitin-like protein UBL1) (GAP-modifying protein 1) (GMP1) (Sentrin) Length = 101 Score = 89.7 bits (221), Expect = 5e-18 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Frame = +1 Query: 136 ADEDKKPAGDG-----GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNS 300 +D++ KP+ + G +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS Sbjct: 2 SDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 61 Query: 301 IAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + FLF+G+R+ TP EL MEE D I+ QTGG Sbjct: 62 LRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
>SUMO1_BOVIN (Q5E9D1) Small ubiquitin-related modifier 1 precursor (SUMO-1)| Length = 101 Score = 89.7 bits (221), Expect = 5e-18 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Frame = +1 Query: 136 ADEDKKPAGDG-----GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNS 300 +D++ KP+ + G +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS Sbjct: 2 SDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 61 Query: 301 IAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + FLF+G+R+ TP EL MEE D I+ QTGG Sbjct: 62 LRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
>SUMO1_CERNI (Q9MZD5) Small ubiquitin-related modifier 1 precursor (SUMO-1)| (Sentrin) Length = 101 Score = 89.4 bits (220), Expect = 7e-18 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Frame = +1 Query: 136 ADEDKKPAGDG-----GGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNS 300 +D++ KP+ + G +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS Sbjct: 2 SDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 61 Query: 301 IAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 + FLF+G+R+ TP EL MEE D I+ QTGG Sbjct: 62 LRFLFEGQRIADNHTPKELGMEEEDVIEVYHEQTGG 97
>SMT3_CAEEL (P55853) Ubiquitin-like protein SMT3| Length = 91 Score = 85.9 bits (211), Expect = 7e-17 Identities = 43/89 (48%), Positives = 55/89 (61%) Frame = +1 Query: 142 EDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 321 +D AGD +I +KV GQD NEV FR+K T + KL +Y DR V +NS+ FLFDG Sbjct: 3 DDAAQAGDNA-EYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDG 61 Query: 322 RRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 RR+ + TP LEME+ D I+ Q GG Sbjct: 62 RRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
>SUMO4_HUMAN (Q6EEV6) Small ubiquitin-related modifier 4 precursor (SUMO-4)| (Small ubiquitin-like protein 4) Length = 95 Score = 81.6 bits (200), Expect = 1e-15 Identities = 39/79 (49%), Positives = 50/79 (63%) Frame = +1 Query: 178 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 HINLKV GQDG+ V F+IKR T L KLM AYC+ + + + I F F G+ + G P +L Sbjct: 17 HINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSMKQIRFRFGGQPISGTDKPAQL 76 Query: 358 EMEEGDEIDAMLHQTGGCF 414 EME+ D ID TGG + Sbjct: 77 EMEDEDTIDVFQQPTGGVY 95
>SMT3_YEAST (Q12306) Ubiquitin-like protein SMT3 precursor| Length = 101 Score = 79.3 bits (194), Expect = 7e-15 Identities = 38/78 (48%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = +1 Query: 178 HINLKVKGQDGN-EVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDE 354 HINLKV DG+ E+FF+IK++T L++LM A+ RQ +++S+ FL+DG R++ +QTP++ Sbjct: 23 HINLKVS--DGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPED 80 Query: 355 LEMEEGDEIDAMLHQTGG 408 L+ME+ D I+A Q GG Sbjct: 81 LDMEDNDIIEAHREQIGG 98
>GLNA4_PEA (Q43066) Glutamine synthetase root isozyme B (EC 6.3.1.2)| (Glutamate--ammonia ligase) (Cytosolic GS3 B) Length = 357 Score = 34.7 bits (78), Expect = 0.20 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Frame = +1 Query: 61 GPNPDLSSS----AARHSTEESPEMSGVTADEDKKP-AGD--GGGAHINLKVKGQDGNEV 219 GP+ +S+ AAR+ E E+SGV D KP GD G GAH N K N Sbjct: 203 GPSVGISAGDEIWAARYILERITEISGVVVSFDPKPIPGDWNGAGAHANFSTKSMRENGG 262 Query: 220 FFRIKRSTQ 246 + IK++ + Sbjct: 263 YEVIKKAIE 271
>ESC2_YEAST (Q06340) Protein ESC2 (Establishes silent chromatin protein 2)| Length = 456 Score = 34.7 bits (78), Expect = 0.20 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 181 INLKVKGQDGNEVFFRIKRSTQLKKLMNAY-CDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 + + + GQD +++ ++RST K+ Y +Q + LFD L + + Sbjct: 384 MRIALMGQDNKKIYVHVRRSTPFSKIAEYYRIQKQLPQKTRVKLLFDHDELDMNECIADQ 443 Query: 358 EMEEGDEIDAML 393 +ME+ D +D ++ Sbjct: 444 DMEDEDMVDVII 455
>GLNA3_PEA (P07694) Glutamine synthetase root isozyme A (EC 6.3.1.2)| (Glutamate--ammonia ligase) (Cytosolic GS3 A) Length = 357 Score = 33.5 bits (75), Expect = 0.44 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Frame = +1 Query: 61 GPNPDLSSS----AARHSTEESPEMSGVTADEDKKPA-GD--GGGAHINLKVKGQDGNEV 219 GP+ +S+ AAR+ E E++GV D KP GD G GAH N K N Sbjct: 203 GPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHANFSTKSMRENGG 262 Query: 220 FFRIKRSTQ 246 + IK++ + Sbjct: 263 YEVIKKAIE 271
>GLNA1_ALNGL (O04867) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS(1)) Length = 356 Score = 33.5 bits (75), Expect = 0.44 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Frame = +1 Query: 61 GPNPDLSSS----AARHSTEESPEMSGVTADEDKKPA-GD--GGGAHINLKVKGQDGNEV 219 GP+ +S+ AAR+ E E++GV D KP GD G GAH N K N Sbjct: 203 GPSVGISAGDEVWAARYILERITEIAGVVLSLDPKPIQGDWNGAGAHTNYSTKSMRNNGG 262 Query: 220 FFRIKRSTQ 246 + IK++ + Sbjct: 263 YEIIKKAIE 271
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 33.1 bits (74), Expect = 0.58 Identities = 30/118 (25%), Positives = 51/118 (43%) Frame = +1 Query: 70 PDLSSSAARHSTEESPEMSGVTADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQL 249 PDL +S E+ P S T ++ KK A G+H++ V +D N F Sbjct: 24 PDLDASD--DEMEKKPVKSSKTKNKSKKKAKQQQGSHLDEDVH-EDLNPEF--------- 71 Query: 250 KKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEEGDEIDAMLHQTGGCFRRA 423 + S+D + F G +G++ DE+E ++ D +D ++ + GG A Sbjct: 72 ---------QFSIDSGEVTTNFAGWDFQGDEKSDEVEKKDVD-LDGIIRRKGGLIMMA 119
>DLX2_HUMAN (Q07687) Homeobox protein DLX-2| Length = 328 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Frame = +1 Query: 49 GSPYGPNPDLSSSAARHSTEESPEMSGVTADE------DKKPAGDGGG 174 G GP + SSS++ H +ESP + TA + + PAG GGG Sbjct: 32 GGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGG 79
>GLN13_ARATH (Q9LVI8) Glutamine synthetase cytosolic isozyme 1-3 (EC 6.3.1.2)| (GLN1;3) (Glutamate--ammonia ligase GLN1;3) (GS1) Length = 354 Score = 31.2 bits (69), Expect = 2.2 Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 10/74 (13%) Frame = +1 Query: 61 GPNPDLSSS----AARHSTEESPEMSGVTADEDKKPA-GD--GGGAHINLKVK---GQDG 210 GP +SS AR+ E E+SGV D KP GD G GAH N K G Sbjct: 203 GPVEGISSGDQVWVARYLLERITEISGVIVSFDPKPVPGDWNGAGAHCNYSTKTMRNDGG 262 Query: 211 NEVFFRIKRSTQLK 252 EV + QLK Sbjct: 263 LEVIKKAIGKLQLK 276
>PKD2_MOUSE (O35245) Polycystin-2| Length = 966 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = +1 Query: 49 GSPYGPNPDLSSSAARHSTEESPEMSGVTADEDKKPAGDGGGAHINLKVKGQDGN 213 G+ P+P LSS + + + ++P D+D + G+ GG + + V+ + G+ Sbjct: 66 GASASPSPPLSSCSRQAWSRDNPGFEAEEDDDDDEVEGEEGGMVVEMDVEWRPGS 120
>MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate, 80 kDa protein, light chain) (PKCSL) (80K-L protein) Length = 331 Score = 30.8 bits (68), Expect = 2.9 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +1 Query: 1 AAVQXSSXXXXXXXXXGSPYGPNPDLSSSAARHSTEESPEMSGVTADEDKKPAGDGGGAH 180 AA SS +P N R S ++S ++SG + ++KK AG+GG A Sbjct: 125 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 184 Query: 181 INLKVKGQD 207 G+D Sbjct: 185 APAAEGGKD 193
>GLNA1_VITVI (P51118) Glutamine synthetase cytosolic isozyme 1 (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 356 Score = 30.0 bits (66), Expect = 4.9 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Frame = +1 Query: 61 GPNPDLSSS----AARHSTEESPEMSGVTADEDKKPA-GD--GGGAHINLKVKGQDGNEV 219 GP+ +S+ +R+ E E++GV D KP GD G GAH N K + Sbjct: 203 GPSVGISAGDELWVSRYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGG 262 Query: 220 FFRIKRSTQ 246 F IK++ + Sbjct: 263 FEVIKKAIE 271
>ESC2_ASHGO (Q756K3) Protein ESC2 (Establishes silent chromatin protein 2)| Length = 407 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/72 (20%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 181 INLKVKGQDGNEVFFRIKRSTQLKKLMNAY-CDRQSVDLNSIAFLFDGRRLRGEQTPDEL 357 + + + G D +VF ++ +T L K+ Y ++ ++ +FD + + T + Sbjct: 335 LKIVLLGSDNKKVFIHVRPTTTLLKVAEHYRVAKELPPTVQLSLMFDHEEIDLDDTICNI 394 Query: 358 EMEEGDEIDAML 393 ++E+GD I+ ++ Sbjct: 395 DIEDGDIIEVVV 406
>FARP1_PONPY (Q5RAB8) FERM, RhoGEF and pleckstrin domain-containing protein 1| Length = 1045 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 112 SPEMSGV-TADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCD 276 +PE SG+ T + +KP G +++K++ D + F + + K L++A C+ Sbjct: 16 APENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCN 71
>FARP1_HUMAN (Q9Y4F1) FERM, RhoGEF and pleckstrin domain-containing protein 1| (Chondrocyte-derived ezrin-like protein) Length = 1045 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 112 SPEMSGV-TADEDKKPAGDGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCD 276 +PE SG+ T + +KP G +++K++ D + F + + K L++A C+ Sbjct: 16 APENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCN 71
>AROC_METAC (Q8TT87) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 365 Score = 29.3 bits (64), Expect = 8.3 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = +1 Query: 160 GDGGGAHINLKVKGQD---GNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 330 GD G + L VKG G VF R+ L A +V I F+ R+ Sbjct: 203 GDSVGGIVELIVKGVPAGLGEPVFDRLDAD-----LSKALMSIPAVKGFEIGAGFEAARM 257 Query: 331 RGEQTPDELEMEEGDEIDAMLHQTGG 408 RG + D ME+G EI + GG Sbjct: 258 RGSEMNDPFRMEQG-EITCSKNNAGG 282
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 29.3 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +1 Query: 1 AAVQXSSXXXXXXXXXGSPYGPNPDLSSSAARHSTEESPEMSGVTADEDKKPAGDGGGA 177 AA SS +P N R S ++S ++SG + ++KK AG+GG A Sbjct: 124 AASAASSSSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEA 182
>SNF7_NEUCR (Q871Y8) Vacuolar sorting protein snf-7 (Vacuolar protein| sorting-associated protein vps-32) Length = 228 Score = 29.3 bits (64), Expect = 8.3 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 319 GRRLRGEQTPDELEMEEGDEIDAMLHQTGG 408 G+ + + DELE + +E+D+ LH+TGG Sbjct: 154 GQPIDEGELEDELEKLQQEEVDSKLHETGG 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,884,915 Number of Sequences: 219361 Number of extensions: 1350884 Number of successful extensions: 5861 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5234 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5856 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
