ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 234 1e-61
2CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 93 4e-19
3CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 92 1e-18
4CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 82 1e-15
5CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 67 4e-11
6CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 63 5e-10
7CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 62 8e-10
8CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 62 8e-10
9CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 59 7e-09
10CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 57 3e-08
11CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 57 3e-08
12CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 57 3e-08
13CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 57 3e-08
14CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 57 5e-08
15CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 57 5e-08
16CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 56 6e-08
17CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 56 6e-08
18CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 56 8e-08
19CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 55 1e-07
20CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 55 1e-07
21CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 55 2e-07
22CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 54 2e-07
23CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 54 2e-07
24CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 54 3e-07
25CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 54 3e-07
26CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 54 3e-07
27CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 54 3e-07
28CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 54 4e-07
29CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 53 5e-07
30LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 53 5e-07
31CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 53 5e-07
32CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 53 5e-07
33CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 53 7e-07
34CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 52 9e-07
35CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 52 9e-07
36CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 52 9e-07
37CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 52 9e-07
38CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 52 1e-06
39CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 52 1e-06
40CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 52 1e-06
41CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 52 1e-06
42CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 52 1e-06
43CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 52 1e-06
44CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 52 1e-06
45CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 52 1e-06
46CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 52 1e-06
47CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 52 1e-06
48CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 52 1e-06
49CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 51 2e-06
50CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 51 2e-06
51CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 51 2e-06
52CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 51 2e-06
53CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 51 2e-06
54CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 51 2e-06
55CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 50 4e-06
56CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 50 4e-06
57CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 50 4e-06
58CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 50 6e-06
59CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 49 7e-06
60LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 49 9e-06
61CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 49 9e-06
62CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 48 2e-05
63CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 48 2e-05
64CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 48 2e-05
65CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 48 2e-05
66CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 47 3e-05
67CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 47 4e-05
68CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 47 4e-05
69CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 46 6e-05
70CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 46 8e-05
71FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 42 9e-04
72CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 40 0.003
73CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fr... 37 0.037
74CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ... 34 0.24
75FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, ... 32 0.92
76MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial p... 32 1.2
77FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein ... 30 3.5
78GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.... 30 3.5
79NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor (Na(+)/Ca... 30 4.5
80FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein ... 30 4.5
81AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 30 4.5
82GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.... 30 4.5
83SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Gl... 29 7.8
84FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein ... 29 7.8
85FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein ... 29 7.8
86NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor (Na(+)/... 29 7.8
87GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.... 29 7.8
88ELI5_HORVU (P14895) High molecular mass early light-inducible pr... 29 7.8
89VL2_HPV19 (P36752) Minor capsid protein L2 29 7.8
90TM14C_HUMAN (Q9P0S9) Transmembrane protein 14C 29 7.8 
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score =  234 bits (597), Expect = 1e-61
 Identities = 107/134 (79%), Positives = 116/134 (86%)
 Frame = +1

Query: 151 FVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWL 330
           FVVRA+S+PP KQ  NRQLWFASKQSL+YLDG LPGDFGFDPLGLSDPEGTGGFIEP+WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 331 AYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAGTYQYWADPYTLF 510
           AYGE+ NGR AM+G  G IAPE LGK GL+P ETA+ WFQ G IPPAGTY YWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 511 VFEMALIGFAEHRR 552
           V EMAL+GFAEHRR
Sbjct: 157 VLEMALMGFAEHRR 170
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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = +1

Query: 196 NRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMG 372
           +R LWF       +LDG+LPGDFGFDPLGL SDPE        +W A  E+ + R AM+G
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLG 117

Query: 373 VVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRR 552
             G+  PE L K+G++   +   W+       AG  +Y+ D  TLFV E+ LIG+AE RR
Sbjct: 118 AAGIFIPEFLTKIGVLNTPS---WY------TAGEQEYFTDTTTLFVIELVLIGWAEGRR 168



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 229 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM+ V+G
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMG 235
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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = +1

Query: 160 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAY 336
           R++++     + +R LWF       +LDG+LPGDFGFDPLGL SDPE        RW   
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQ 105

Query: 337 GEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAGTYQYWADPYTLFVF 516
            E+ + R AM+G  G+  PE L K+G++   +   W+       AG  +Y+ D  TLF+ 
Sbjct: 106 AELVHCRWAMLGAAGIFIPELLTKIGILNTPS---WY------TAGEQEYFTDTTTLFIV 156

Query: 517 EMALIGFAEHRR 552
           E+ LIG+AE RR
Sbjct: 157 ELVLIGWAEGRR 168



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 229 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM+ V+G
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMG 235
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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
 Frame = +1

Query: 208 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 384
           W     S  YL G+L GD GFDPLGL+ DPE        +W    E+ NGR AM+GV GM
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGM 110

Query: 385 IAPEALGKVGLV-PPETAIPWFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRR 552
           + PE   K+G++  PE    W+       AG  QY+A   TLFV E  L  + E RR
Sbjct: 111 LLPEVFTKIGIINVPE----WYD------AGKEQYFASSSTLFVIEFILFHYVEIRR 157
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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
 Frame = +1

Query: 235 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKV 411
           +LDG+LPGDFGFDPLGL  DP     F+  +W    E+ +GR AM+ V+G+   +A    
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGIFVGQAW--- 125

Query: 412 GLVPPETAIPWFQAGAIPPAGTYQYWADPY---TLFVFEMALIGFAEHRR 552
                 T IPWF+AGA P A        P+   TL   ++ L+G+ E +R
Sbjct: 126 ------TGIPWFEAGADPGA------VAPFSFGTLLGTQLLLMGWVESKR 163
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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
 Frame = +1

Query: 151 FVVRASSSPPAKQNDNRQLWFASKQS------LTYLDGTLPGDFGFDPLGL-SDPEGTGG 309
           FVV A++  P K       W  + +S        +LDG+LPGDFGFDPLGL  DP     
Sbjct: 42  FVVAAAAVAPKKS------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP----A 91

Query: 310 FIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPA-GTYQY 486
           F+  +W    E+ +GR AM  V+G+   +A          + IPWF+AGA P A   + +
Sbjct: 92  FL--KWYREAELIHGRWAMAAVLGIFVGQAW---------SGIPWFEAGADPGAIAPFSF 140

Query: 487 WADPYTLFVFEMALIGFAEHRR 552
                +L   ++ L+G+ E +R
Sbjct: 141 G----SLLGTQLLLMGWVESKR 158
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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
 Frame = +1

Query: 208 WFASKQSLTYLDGTLPGDFGFDPLGLSD-PEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 384
           W   +   +YLDG+ PGDFGFD LGL + P     + E       E+ + R AM+ V G+
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE------SELIHCRWAMLAVPGI 102

Query: 385 IAPEALGKVGLVPPE--TAIPWFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRR 552
           I PEALG    V  +   AIP  QA  +   G    W    T+   E   I F EH+R
Sbjct: 103 IVPEALGLGNWVKAQEWAAIPGGQATYL---GQPVPWGTLPTILAIEFLAIAFVEHQR 157
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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +1

Query: 235 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKV 411
           +LDG+LPGD+GFDPLGL  DP     F+  +W    E+ +GR AM  V+G+   +A    
Sbjct: 70  WLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGIFVGQAW--- 120

Query: 412 GLVPPETAIPWFQAGAIPPA-GTYQYWADPYTLFVFEMALIGFAEHRR 552
                 + IPWF+AGA P A   + +     TL   ++ L+G+ E +R
Sbjct: 121 ------SGIPWFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKR 158
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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 113

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AGA I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 114 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEG 171

Query: 547 RR 552
            R
Sbjct: 172 YR 173



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/48 (45%), Positives = 25/48 (52%)
 Frame = +1

Query: 238 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LD   PG   FDPLGL+D   T  F E   L   E+ NGR AM  + G
Sbjct: 183 LDKVYPGG-AFDPLGLADDPDT--FAE---LKVKELKNGRLAMFSMFG 224
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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 34  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 87

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AG+ I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 88  EILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEG 145

Query: 547 RR 552
            R
Sbjct: 146 YR 147
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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AG+ I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 116 EILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEG 173

Query: 547 RR 552
            R
Sbjct: 174 YR 175
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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S Q+ +YL+G  PGD+G+D  GLS DPE    F   R L   E+ +GR AM+G +G + P
Sbjct: 63  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFARNRAL---EVIHGRWAMLGALGCVFP 116

Query: 394 EALGK-VGLVPPETAIPWFQAGA-IPPAGTYQYWADPYTLFVFE-MALIGF 537
           E L K VG+   E    WF+AG+ I   G   Y  +P  +     +A++GF
Sbjct: 117 EVLQKWVGVEFKEPV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF 165



 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +1

Query: 253 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           PG   FDPLGL+D   T  F E   L   EI NGR AM  + G
Sbjct: 192 PGGQYFDPLGLADDPVT--FAE---LKVKEIKNGRLAMFSMFG 229
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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G I P
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCIFP 114

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L K G+   E    WF+AGA I   G   Y  +P
Sbjct: 115 ELLSKNGVQFGEAV--WFKAGAQIFSEGGLDYLGNP 148
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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AG+ I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 116 EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEG 173

Query: 547 RR 552
            R
Sbjct: 174 YR 175
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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S Q+ +YL+G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM+G +G I P
Sbjct: 60  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFAKNRAL---EVIHGRWAMLGALGCIFP 113

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADPYTLFVFE-MALIGF 537
           E L K   V  +  + WF+AG+ I   G   Y  +P  +     +A++GF
Sbjct: 114 EVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGF 162



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +1

Query: 253 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           PG   FDPLGL+D   T  F E   L   EI NGR AM  + G
Sbjct: 189 PGGQYFDPLGLADDPTT--FAE---LKVKEIKNGRLAMFSMFG 226
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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
 Frame = +1

Query: 160 RASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGTG 306
           R     P  +  +  +W+ S + L          +YL G  PGD+G+D  GLS DPE   
Sbjct: 33  RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPE--- 89

Query: 307 GFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQ 483
            F + R L   E+ + R AM+G +G + PE L K G+   E    WF+AG+ I   G   
Sbjct: 90  TFAKNREL---EVIHSRWAMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLD 144

Query: 484 YWADP 498
           Y  +P
Sbjct: 145 YLGNP 149
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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
 Frame = +1

Query: 157 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           V +SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 5   VASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 60

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 61  --EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 112
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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
 Frame = +1

Query: 235 YLDGTLPGDFGFDPLGLSD-PEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKV 411
           YL+G + GD+G+DP GL   PE        ++ A+ E+ + R AM+G  G I PEAL K 
Sbjct: 84  YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIPEALNKY 137

Query: 412 GLVPPETAIPWFQAGAIPPAG-TYQYWAD--PYTL---FVFEMALIGFAEHRR 552
           G      A+ WF+ GA+   G T  Y+    P  L    V E+ L+G AE+ R
Sbjct: 138 GANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYR 189
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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM+G +G + P
Sbjct: 61  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHGRWAMLGALGCVFP 114

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+ G+ I   G  QY  +P
Sbjct: 115 ELLARNGVKFGEAV--WFKKGSQIFSEGGLQYLGNP 148
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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S Q  +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 62  SDQIPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 115

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AG+ I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 116 EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 173

Query: 547 RR 552
            R
Sbjct: 174 YR 175
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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
 Frame = +1

Query: 163 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 339
           ASSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL--- 97

Query: 340 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 98  EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 114

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L K G+   E    WF+AG+ I   G   Y  +P
Sbjct: 115 ELLAKNGVKFGEAV--WFKAGSQIFQEGGLDYLGNP 148
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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q  +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G   P
Sbjct: 62  SEQIPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCTFP 115

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 546
           E L K G+   E    WF+AG+ I   G   Y  +P          ++  ++ L+GF E 
Sbjct: 116 ELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEG 173

Query: 547 RR 552
            R
Sbjct: 174 YR 175
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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +1

Query: 157 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 45  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFSKNREL- 100

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 101 --EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 152
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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +1

Query: 157 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 46  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFSKNREL- 101

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 102 --EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 153
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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L K G+   E    WF+AG+ I   G   Y  +P
Sbjct: 116 EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +1

Query: 163 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 339
           +SSSP    N  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   
Sbjct: 46  SSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL--- 99

Query: 340 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E+ + R AM+G +G + PE L + G+   E    WF+ G+ I   G   Y  +P
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKGGSQIFSQGGLDYLGNP 151
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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
 Frame = +1

Query: 157 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           V AS SP    +  + L   S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 39  VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 94

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 95  --EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 146
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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 45/162 (27%), Positives = 63/162 (38%), Gaps = 43/162 (26%)
 Frame = +1

Query: 196 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGF--------------------- 312
           +R LWF   +S  YLDG+L GD+GFDP GL  P     F                     
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTR 110

Query: 313 ---IEPR---WLAYGEIF-----------NGRTAMMGVVGMIAPEALGKVGLVPPETAIP 441
              ++P+   +  Y E+F           +GR AM+  +G I  E L         T + 
Sbjct: 111 TEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL---------TGVT 161

Query: 442 WFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEHRR 552
           W  AG +       Y   P      TL   E+ +IG+ E +R
Sbjct: 162 WQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR 203
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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +1

Query: 205 LWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LWF + +    L G  P D GFDPL L+ DP+     +  R +   E+F+GR AM+  VG
Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNLAADPD-----VYAR-MRVAEVFHGRLAMLCTVG 242

Query: 382 MIAPEALGKVGLVPPETAIPWFQAG 456
            I PE LGK           WF+AG
Sbjct: 243 CIVPELLGKGA---------WFEAG 258



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
 Frame = +1

Query: 205 LWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LWF +  + ++L+G   GD GFDP GL+ DP+          +   E+++GR AM+ VVG
Sbjct: 4   LWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTF------ERMRIAEVYHGRLAMLAVVG 57

Query: 382 MIAPEALGK---------VGLVPPETAIPWFQAGAIPPAGTYQYWADPYTLF 510
            + P+ LGK          G+   E AI     G    A   +  +DP T++
Sbjct: 58  ALVPDYLGKGIWYEAAQNAGIGLKEVAIFTAAYGVFEVARGVKENSDPTTIY 109



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 193 DNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMM 369
           + R+LWF +     YL G   GD GFDP GL +DP      +    +   E+F+ R +M+
Sbjct: 369 EERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP------VTFERMQVAEVFHCRLSML 422

Query: 370 GVVGMIAPEALG 405
            +VG + PE LG
Sbjct: 423 ALVGCLVPELLG 434
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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 166 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGE 342
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   E
Sbjct: 45  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---E 98

Query: 343 IFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           + + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 99  VIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 166 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGE 342
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   E
Sbjct: 47  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---E 100

Query: 343 IFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           + + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 101 VIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
 Frame = +1

Query: 163 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           AS+S       +R L+    S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 51  ASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---NFAKNREL- 106

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AGA I   G   Y  +P
Sbjct: 107 --EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNP 158
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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
 Frame = +1

Query: 181 AKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRW 327
           AKQ  +   W+ S + L          +YL G  PGD+G+D  GLS DPE    F + R 
Sbjct: 41  AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNRE 97

Query: 328 LAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           L   E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 98  L---EVIHCRWAMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDYLGNP 150
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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL+G   GD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 65  SGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGCLTP 118

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L K G+   E    WF+AGA I   G   Y  +P
Sbjct: 119 ELLAKSGVKFGEAV--WFKAGAQIFSEGGLDYLGNP 152



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
 Frame = +1

Query: 241 DGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVG-- 414
           D   PG   FDPLGL+D   T  F E   L   EI NGR AM  + G      +   G  
Sbjct: 189 DPIYPGG-SFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242

Query: 415 ------LVPPETAIPWFQAGAIPP 468
                 L  P     W  A   PP
Sbjct: 243 ENLNDHLADPVANNAWAYAPTSPP 266
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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 ELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNP 150
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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 ELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNP 150
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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 150
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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 150
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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLAR 133

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AGA I   G   Y   P
Sbjct: 134 NGVKFGEAV--WFKAGAQIFSEGGLDYLGSP 162
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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLAR 133

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AGA I   G   Y   P
Sbjct: 134 NGVKFGEAV--WFKAGAQIFSEGGLDYLGSP 162
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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
 Frame = +1

Query: 196 NRQLW---FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTA 363
           NR  W   ++   +  YL G  PGD+G+D  GLS DPE    + E       E+ + R A
Sbjct: 40  NRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARWA 93

Query: 364 MMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           M+G +G   PE L K G    E    WF+AGA I   G   Y  +P
Sbjct: 94  MLGALGCQTPELLAKSGTKFGEAV--WFKAGAQIFSEGGLDYLGNP 137



 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/48 (45%), Positives = 25/48 (52%)
 Frame = +1

Query: 238 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR A   + G
Sbjct: 173 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLASFSMFG 214
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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 61  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 114

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 115 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 148
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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
 Frame = +1

Query: 163 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 333
           A+SS       +R L+    S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 42  AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 97

Query: 334 YGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
             E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 98  --EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
 Frame = +1

Query: 157 VRASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGT 303
           +R +++ P     +   W+ + + L          +YL G  PGD+G+D  GLS DPE  
Sbjct: 32  MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-- 89

Query: 304 GGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTY 480
             F + R L   E+ + R AM+G +G + PE L + G+   E    WF+AG+ I   G  
Sbjct: 90  -TFAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGL 143

Query: 481 QYWADP 498
            Y  +P
Sbjct: 144 DYLGNP 149
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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 63  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLAR 116

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 145
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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 57  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLSR 110

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 111 NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 139
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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 65  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLSR 118

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 119 NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 147
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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 48/182 (26%)
 Frame = +1

Query: 151 FVVRASSSPPAK----QND-NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP------- 294
           F  +  + PP K    Q+D +R +WF       +LDG++ GD GFDP GL  P       
Sbjct: 35  FGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYD 94

Query: 295 ---------EGTGGFI---------------EPRWLAYG-------EIFNGRTAMMGVVG 381
                    +   G I               +P    +G       E+ +GR AM+G +G
Sbjct: 95  FDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLG 154

Query: 382 MIAPEALGKVGLVPPETAIPWFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEH 546
            IA EAL         T I W  AG +       Y   P      TL   E+ ++G+ E 
Sbjct: 155 AIAVEAL---------TGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEF 205

Query: 547 RR 552
           +R
Sbjct: 206 QR 207
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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 47  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPELLAR 100

Query: 409 VGLVPPETAIPWFQAGA 459
            G+   E +  WF+AG+
Sbjct: 101 NGVKFGEAS--WFKAGS 115
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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S+ + +YL G  PGD+G+D   +S DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SEGTPSYLTGEFPGDYGWDTAAVSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L K GL   E    WF+AGA I   G   Y  +P
Sbjct: 117 ELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNP 150
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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + PE L +
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLAR 120

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 121 NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +1

Query: 163 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 339
           +SSSP    +  + L   S ++ +YL G  P D+G+D  GLS DPE    F + R L   
Sbjct: 46  SSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPE---TFAKNREL--- 99

Query: 340 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E+ + R AM+G +G + PE   + G+   E    WF+AGA I   G   Y  +P
Sbjct: 100 EVIHCRWAMLGALGCVFPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNP 151
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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + PE L +
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFPELLAR 120

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 121 NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 149
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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E   + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 117 ELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 150
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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = +1

Query: 205 LWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           +WF   Q   +L G  P D GFDPL ++ DP      +  R +   E+F+ R +M+ +VG
Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADPT-----VYAR-MRVSEVFHARLSMLAIVG 214

Query: 382 MIAPEALGKVGLVPPETAIPWFQAG 456
            I PE LGK           WF+ G
Sbjct: 215 SIVPELLGKGA---------WFEVG 230



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 340 EIFNGRTAMMGVVGMIAPEALG 405
           E+FNGR AM+ +VG + PE LG
Sbjct: 11  EVFNGRLAMLAIVGCVYPELLG 32
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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ +   AM+G +G + PE L +
Sbjct: 8   SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSTWAMLGALGCVFPELLSR 61

Query: 409 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
            G+   E    WF+AG+ I   G   Y  +P
Sbjct: 62  NGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 90
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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 44/160 (27%)
 Frame = +1

Query: 205 LWFASKQSLTYLDGTLPGDFGFDPLGLSDP----------------EGTGGFIEP----- 321
           LW  +     +LDG+LPGD GFDPLGLS P                +   G +E      
Sbjct: 51  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 110

Query: 322 --------RWLAYGEIF-----------NGRTAMMGVVGMIAPEALGKVGLVPPETAIPW 444
                   R   Y E+F           +GR AM+  +G +  EA          T + W
Sbjct: 111 PDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEA---------TTGVSW 161

Query: 445 FQAGAIPPAG-TYQYWADPYT---LFVFEMALIGFAEHRR 552
            +AG +   G +Y   + P++   L   E+ L+G AE  R
Sbjct: 162 VEAGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYR 201
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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 43/162 (26%)
 Frame = +1

Query: 196 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEG-----------------TGGFIEPR 324
           +R LW+    S  +LDG+L GD+GFDP GL  P                    G  I  R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 325 WLA----------YGEIF-----------NGRTAMMGVVGMIAPEALGKVGLVPPETAIP 441
             A          Y E+F           +GR AM+  +G ++ E L         T + 
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL---------TGVT 164

Query: 442 WFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEHRR 552
           W  AG +       Y   P      TL   E+ +IG+ E +R
Sbjct: 165 WQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR 206
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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +1

Query: 211 FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMI 387
           F+   +  YL G  PGD+G+D  GLS DP+    + E       E+ + R A++G +G++
Sbjct: 45  FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGIL 98

Query: 388 APEALGKVGLVPPETAIPWFQAGA 459
            PE L +   V     + WF+AGA
Sbjct: 99  TPELLSQYAGVQFGEPV-WFKAGA 121



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 25/55 (45%), Positives = 28/55 (50%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           S+  L  LD   PG   FDPLGL+D   T  F E   L   EI NGR AM   +G
Sbjct: 166 SEGFLDDLDTLYPGG-PFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSCLG 214
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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL G  PGD+G+D   LS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAELSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E L + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNP 151
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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
 Frame = +1

Query: 196 NRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 366
           +R  W    S  +  YL G  PGD+G+D  GLS DPE    + E       E+ + R A+
Sbjct: 43  DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWAL 96

Query: 367 MGVVGMIAPEALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           +G +G++ PE L     V     + WF+AGA I   G   Y   P
Sbjct: 97  LGALGILTPELLSTYAGVKFGEPV-WFKAGAQIFSEGGLDYLGSP 140



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 23/48 (47%), Positives = 25/48 (52%)
 Frame = +1

Query: 238 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM    G
Sbjct: 176 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSCFG 217
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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117

Query: 394 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           E   + G+   E    W +AG+ I   G   Y  +P
Sbjct: 118 ELFARNGVKFGEAV--WLKAGSQIFSEGGLDYLGNP 151
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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 217 SKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPE 396
           S ++ +YL G  PGD+G+D  GLS    T  F + R L   E+ + R  M+G +G + PE
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPE 117

Query: 397 ALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
              + G+   E    WF+AG+ I   G   Y  +P
Sbjct: 118 LFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNP 150
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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = +1

Query: 208 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 384
           W    Q      G  PGD+G+D  GLS DPE    + E       E+ + R  ++G +GM
Sbjct: 66  WDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGM 119

Query: 385 IAPEALGKVGLVPPETAIPWFQAG-AIPPAGTYQYWADP 498
           + PE L     +    A  WF+AG AI   G   Y  +P
Sbjct: 120 VTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNP 158



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/48 (47%), Positives = 26/48 (54%)
 Frame = +1

Query: 238 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 381
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM   +G
Sbjct: 194 LDPLYPGE-AFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFACLG 235
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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKV 411
           +YL G  PGD+G+D  GLS    T  F + R L   E+ + R AM   +G I PE L  +
Sbjct: 71  SYLTGEFPGDYGWDTAGLSAYPET--FAKNREL---EVIHSRCAMSAALGCIFPELLSVM 125

Query: 412 GLVPPETAIPWFQAGA-IPPAGTYQYWADP 498
           G    E    WF+AGA I   G   Y  +P
Sbjct: 126 GQGFGEAV--WFKAGAQIFSEGGLDYLGNP 153
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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +1

Query: 241 DGTLPGDFGFDPLGL--SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEAL 402
           +G  PGD GFDPLGL  SDP+      E R +   E+ +GR AM+   G +A EA+
Sbjct: 145 EGYEPGDLGFDPLGLAPSDPD------EFRLMQEKELSHGRLAMIAAAGFLAQEAV 194
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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +1

Query: 232 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 408
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R A+   +G + PE L +
Sbjct: 66  SYLTGEFPGDYGWDTEGLSADPE---TFAKNREL---EVIHCRWAIAVGLGCVFPELLAR 119

Query: 409 VGLVPPETAIPWFQAGA 459
            G+   E    WF+AG+
Sbjct: 120 NGVKFGEGV--WFKAGS 134
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>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)|
          Length = 102

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +1

Query: 271 DPLGLSDPEG--TGGFIEP-RWLAYGEIFNGRTAMMGVVGMIAPEALGKV-GLVPPETAI 438
           DP+G  DP G    G +E  + LA  EI +GR AM+  +G I  E  GK+ G + P T +
Sbjct: 10  DPVGFFDPLGFTADGSVENFKKLAQTEIKHGRVAMLATMGYITQEITGKLPGYLSPSTGV 69

Query: 439 PW 444
            +
Sbjct: 70  KY 71
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>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
 Frame = +1

Query: 247 TLPGDFG-----------FDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIA 390
           T PG FG           FDPLGL+D   T  F E   L   EI NGR AM G++G  A
Sbjct: 33  TAPGQFGEDLDRLYPGGPFDPLGLADDPDT--FPE---LKVKEIKNGRLAMSGMLGFYA 86
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>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 203

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 241 DGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG--EIFNGRTAMMGVVGMIAPEALGKVG 414
           +G  PGDF    L      G   F E   L+    E+ NGR AMMG++G++  E LG  G
Sbjct: 142 EGEFPGDFRNGALDF----GWDTFDEETKLSKRAIELNNGRAAMMGILGLMVHEQLG--G 195

Query: 415 LVP 423
            +P
Sbjct: 196 SIP 198
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>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC|
           2.5.1.8) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPP transferase) (IPTase)
           (IPPT) (hGRO1)
          Length = 467

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 267 AKVTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 166
           A V   RAV VG GL G +  LP+V++LG  G G+
Sbjct: 2   ASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36
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>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast|
           precursor
          Length = 212

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
 Frame = +1

Query: 214 ASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 393
           A K S     G  P    +DPLGL        F     L Y EI +GR AM+ VVG I  
Sbjct: 31  AMKMSFESEIGAQPPIGFWDPLGLVADADQERFDR---LRYVEIKHGRIAMLAVVGHITQ 87

Query: 394 EALGKVGLVPPETAIPWFQA-------GAIPPAGTYQ 483
           +     G++  +  + +  +         IPP GT Q
Sbjct: 88  QNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQ 124
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>GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC)
          Length = 1103

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 263 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 376
           +A  PWGCP  +A  G+++P   P A +  A  R +GW
Sbjct: 145 IALVPWGCPWTQA-EGTTAPAVTPAADALYALLRAFGW 181
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>NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = -2

Query: 342 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 190
           +A+G+P  ++    AL +  P+  + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PEVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
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>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast|
           precursor (Fragment)
          Length = 211

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 238 LDGTLPGDF--GFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEAL 402
           ++G+ PGDF  G +P   S D   +      R +   E+ NGR A MG++GM+  E L
Sbjct: 139 VEGSFPGDFIIGGNPFASSWDSMSSETQASKRAI---ELNNGRAAQMGILGMMVHEEL 193
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>AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 386

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 351 VEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 223
           +E +A   PPGL +P      G+  G    +   +AVEVG G+
Sbjct: 216 IEVIAENVPPGLGDPVFGRLDGELAGALMNIPAVKAVEVGSGV 258
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>GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1109

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 263 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 376
           +A  PW CP  RA  G+++P G P A +  A  R + W
Sbjct: 149 VALVPWSCPGTRA-GGTTAPAGTPAADALYALLRAFRW 185
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>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 473

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 170 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 66
           D+    K   REE  + K  C   P SC P  R W
Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138
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>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast|
           precursor
          Length = 197

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +1

Query: 268 FDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEA 399
           FDPLGL        F     L Y EI +GR +M+ VVG +  EA
Sbjct: 46  FDPLGLVADGDQEKFDR---LRYVEIKHGRISMLAVVGYLVQEA 86
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>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast|
           precursor
          Length = 197

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +1

Query: 268 FDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEA 399
           FDPLGL        F     L Y EI +GR +M+ VVG +  EA
Sbjct: 46  FDPLGLVADGDQEKFDR---LRYVEIKHGRISMLAVVGYLVQEA 86
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>NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -2

Query: 342 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 190
           +A+G+P  ++    AL +  P   + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PDVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
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>GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1110

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 263 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 376
           +A  PWGCP  RA AG+++P   P A +  A  R + W
Sbjct: 150 VALVPWGCPGTRA-AGTTAPVVTPAADALYALLRAFRW 186
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>ELI5_HORVU (P14895) High molecular mass early light-inducible protein HV58,|
           chloroplast precursor (ELIP)
          Length = 231

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 325 WLAYGEIFNGRTAMMGVVGMIAPE 396
           W A  E++NGR AM+G+V + A E
Sbjct: 198 WSADAELWNGRFAMLGLVALAATE 221
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>VL2_HPV19 (P36752) Minor capsid protein L2|
          Length = 520

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 28/94 (29%), Positives = 41/94 (43%)
 Frame = +1

Query: 160 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG 339
           +A + PP   N   Q   A K     L     G F F  LG+S  +GTGG      L  G
Sbjct: 21  QAGTCPPDVINKVEQTTIADK----ILQYGSAGVF-FGGLGISTGKGTGGATGYVPLGEG 75

Query: 340 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIP 441
            +  G TA + +   + P+ +G   ++P +T  P
Sbjct: 76  PVRVGGTATV-IRPSLVPDTIGPSDIIPVDTLNP 108
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>TM14C_HUMAN (Q9P0S9) Transmembrane protein 14C|
          Length = 112

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +1

Query: 295 EGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAG 474
           + TG  +   W  +G  +    A  G++G +      K G VP   A   F  G++   G
Sbjct: 2   QDTGSVVPLHWFGFG--YAALVASGGIIGYV------KAGSVPSLAAGLLF--GSLAGLG 51

Query: 475 TYQYWADPYTLFVF 516
            YQ   DP  ++VF
Sbjct: 52  AYQLSQDPRNVWVF 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,610,600
Number of Sequences: 219361
Number of extensions: 1300058
Number of successful extensions: 5017
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 4687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4987
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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