Clone Information

BLAST Search Result

Clone Name	baal12l13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 ...	32	0.47
2	GD_DROME (O62589) Serine protease gd precursor (EC 3.4.21.-) (Pr...	32	0.47
3	FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhanc...	32	0.61
4	SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dep...	31	0.80
5	PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineraliz...	31	0.80
6	CIC_MOUSE (Q924A2) Protein capicua homolog	30	1.8
7	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	30	1.8
8	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	30	2.3
9	CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor	30	2.3
10	SPT51_ARATH (Q9STN3) Putative transcription elongation factor SP...	29	3.0
11	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	29	3.0
12	BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO d...	29	3.0
13	T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-relate...	29	4.0
14	CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor	29	4.0
15	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	29	4.0
16	NCOA3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48...	29	4.0
17	SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor	29	4.0
18	FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncoge...	28	5.2
19	DOT6_YEAST (P40059) Disrupter of telomere silencing protein 6	28	5.2
20	BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (...	28	5.2
21	FOS_AVINK (P23050) p55-v-Fos transforming protein	28	5.2
22	WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)	28	5.2
23	RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial p...	28	5.2
24	COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor	28	5.2
25	ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (E...	28	5.2
26	HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated c...	28	6.8
27	HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated...	28	6.8
28	CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)	28	6.8
29	MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	28	6.8
30	TAF10_HUMAN (Q12962) Transcription initiation factor TFIID subun...	28	6.8
31	ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)	28	6.8
32	STE20_CANAL (Q92212) Serine/threonine-protein kinase STE20 homol...	28	6.8
33	FIB1_ADEG1 (Q64761) Fiber protein 1	28	6.8
34	CIC_HUMAN (Q96RK0) Protein capicua homolog	28	6.8
35	MYLK2_RABIT (P07313) Myosin light chain kinase 2, skeletal/cardi...	28	8.8
36	COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Co...	28	8.8
37	MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	28	8.8
38	OTU_DROME (P10383) Protein ovarian tumor locus	28	8.8
39	CHIA_ECOLI (P13656) Probable bifunctional chitinase/lysozyme pre...	28	8.8
40	SYW_THEMA (Q9WYW2) Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tr...	28	8.8
41	VGLB_BHV2B (P12641) Glycoprotein B-1 precursor	28	8.8
42	H1_MAIZE (P23444) Histone H1	28	8.8
43	RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology doma...	28	8.8
44	IF2_SYMTH (Q67P86) Translation initiation factor IF-2	28	8.8

>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)|
          Length = 1157

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSS 156
           PH + SAP   P + S P VPS+P         S   +PP  P   +SS
Sbjct: 691 PHPVPSAPSA-PPVPSAPSVPSAPPVPPAPPALSAPSVPPVPPVPPVSS 738

to top

>GD_DROME (O62589) Serine protease gd precursor (EC 3.4.21.-) (Protein|
           gastrulation defective)
          Length = 528

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 75  VAGKGRTVGWSVDRSNPTRGSGLRHELP 158
           V  +G  +GWS DR+N TR   L  ELP
Sbjct: 379 VGERGIVIGWSFDRTNRTRDQKLSSELP 406

to top

>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding|
           factor 1) (Cellular transcription factor ILF-1)
          Length = 655

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 14/65 (21%)
 Frame = +1

Query: 13  HGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPAD--------------PASGM 150
           H IS  P P  ++ +    PSSP   G S G  +GR+ P+D               ASG 
Sbjct: 187 HLISPLPSPTGTISAANSCPSSPRGAGSS-GYKVGRVMPSDLNLMADNSQPENEKEASGG 245

Query: 151 SSPQD 165
            SP+D
Sbjct: 246 DSPKD 250

to top

>SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 5 (EC 3.6.1.-)
           (Sucrose nonfermenting protein 2 homolog) (mSnf2h)
          Length = 1051

 Score = 31.2 bits (69), Expect = 0.80
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 31  PRPNPSLESTPRVPSSPGKDGRSVGRS---IGRIPPADPASGMSSPQD 165
           P P P  ES P  PS+ G  G S G      G   PA P +  S P D
Sbjct: 7   PPPPPPPESAPSKPSAAGAGGSSSGNKGGPEGGAAPAAPCAAGSGPAD 54

to top

>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)|
          Length = 416

 Score = 31.2 bits (69), Expect = 0.80
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   TAEPHGISSAPRPNPSLESTP--RVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
           TA P G SS P P P L + P   VP +P        +  G++   DP+ G +   +P
Sbjct: 115 TARPFGASSPPNPRPGLVTKPVTYVPLAPA----CTPQHNGQVSVPDPSPGAAMKTEP 168

to top

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 10   PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASG 147
            P G+++ P P PS    P  P+SPG D  +   +    PP +P  G
Sbjct: 1538 PTGMAATPVPTPSPAGGPD-PTSPGSDSGTAQVAPPLPPPPEPGPG 1582

to top

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
 Frame = +1

Query: 22  SSAPRPNPSL-------ESTPRVPSSPGKDGRSVGRSIGRIPPADPA 141
           S  P+  PS+        STPR+P  PG     VG + GR P   PA
Sbjct: 252 SWGPKTKPSVIHSRSPPGSTPRLPERPGPSNPPVGPAPGRHPQDTPA 298

to top

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
           P    S  R  P L S+  V + P       GRS   +PP   AS  S+P  P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418

to top

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 15/68 (22%)
 Frame = +1

Query: 10  PHGISSAP----RPNPSLESTPRVPSSPGKDGR-----------SVGRSIGRIPPADPAS 144
           P G++  P     P P       +P  PGKDGR            +G    R PP D  +
Sbjct: 437 PPGLAGPPGAKGEPGPRGVDGQSIPGLPGKDGRPGLDGLPGRKGEMGLPGVRGPPGDSLN 496

Query: 145 GMSSPQDP 168
           G+  P  P
Sbjct: 497 GLPGPPGP 504

to top

>SPT51_ARATH (Q9STN3) Putative transcription elongation factor SPT5 homolog 1|
          Length = 1054

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 1    TAEPHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGM 150
            T   HG + A  P+P L STP  P +P       G   G+  P  P +G+
Sbjct: 887  TPRDHGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQ--PMTPGTGL 934

to top

>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
           P  +  AP P      TPR P  PG+ G          PP  PA+G S P  P
Sbjct: 361 PVPMGGAPPP-----PTPRGPPPPGRGGPP--------PPPPPATGRSGPPPP 400

to top

>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 957

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 37  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQD 165
           P     STP +P  PG+   +V  S   +PP  P    S+P D
Sbjct: 800 PRLGTTSTPNLPPPPGRGSSNVTSSY--LPPPPPPKPQSNPYD 840

to top

>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible|
           leucine zipper protein 2) (Tsc-22-like protein THG-1)
          Length = 395

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 16  GISSAPRPNPSLESTPRVPS---SPGKDGRSVGRSIGRIPPADPAS 144
           G S  P P P     PR+P+   SP   G+   R+ G  PP  P+S
Sbjct: 26  GASDPPTPQPPTGPPPRLPNGEPSPDPGGKGTPRN-GSPPPGAPSS 70

to top

>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +1

Query: 31   PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQ 162
            P+ +P +  TP  P  PG  G   G  +   P      G+  PQ
Sbjct: 991  PKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQ 1034



 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -1

Query: 170  KGSCGEL-MPEAGSAGGIRPIDRPTDRPSFPGDEGTLGVDSRLG 42
            KGS G + +P      G+  I  P   P  PGD+G  G   + G
Sbjct: 1010 KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAG 1053

to top

>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta)
           (BRG-1 protein) (Mitotic growth and transcription
           activator) (Brahma protein homolog 1) (SWI/SNF-related
           matrix-associated actin
          Length = 1647

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +1

Query: 37  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS 153
           P+P L  TPR   SPG  G S G  +G  P   P S  S
Sbjct: 4   PDPPLGGTPRPGPSPG-PGPSPGAMLGPSPGPSPGSAHS 41

to top

>NCOA3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
            (Thyroid hormone receptor activator molecule 1) (TRAM-1)
            (ACTR) (Receptor-associated coactivator 3) (RAC-3)
            (Amplified in breast cancer-1 protein homolog) (AIB-1)
            (Steroid recepto
          Length = 1398

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 25   SAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPAD---PAS-GMSSPQDP 168
            S P+P  +    P V +SP  DG   G ++ + PP     PA+ GM  P +P
Sbjct: 1247 SQPQPQ-AFSPPPNVTASPSMDGVLAGSAMPQAPPQQFPYPANYGMGQPPEP 1297

to top

>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +1

Query: 22  SSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGR 120
           S APRP P        P +PG D    GR  GR
Sbjct: 39  SLAPRPGPEPSRPRAAPETPGGDTAGAGRCGGR 71

to top

>FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 367

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADP 138
           P+G+  AP P P+  S P V  +PG  G+S+GR  G++    P
Sbjct: 94  PYGVP-APAP-PAAYSRPAVLKAPGGRGQSIGRR-GKVEQLSP 133

to top

>DOT6_YEAST (P40059) Disrupter of telomere silencing protein 6|
          Length = 670

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 1   TAEPHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQD 165
           T +PH  S+A   N + ES+P +P+S      +   +  +    +P+S    PQD
Sbjct: 27  TRQPHSSSTAMSKNEAQESSPSLPASSSSSTSASASASSKNSSKNPSSW--DPQD 79

to top

>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 19  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS 153
           +SSAP P PS    P    SP K+  +  ++     PA+PA+  S
Sbjct: 371 VSSAPIPCPSPSPAPSAVPSPPKNVAAEQKAAPSPAPAEPAAPKS 415

to top

>FOS_AVINK (P23050) p55-v-Fos transforming protein|
          Length = 322

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADP 138
           P+G+  AP P P+  S P V  +PG  G+S+GR  G++    P
Sbjct: 49  PYGVP-APAP-PAAYSRPAVLKAPGGRGQSIGRR-GKVEQLSP 88

to top

>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +1

Query: 10  PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
           P GI+  P        TPR P  PG+ G          PP  PA+G S P  P
Sbjct: 345 PLGIAPPP-------PTPRGPPPPGRGGPP--------PPPPPATGRSGPLPP 382

to top

>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial precursor (EC|
           2.7.7.6) (MtRPOL)
          Length = 1230

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 131 AGGIRPIDRPTDRPSFPGDEGTLG 60
           A G++   RP  RP  PG EGT G
Sbjct: 10  AAGLKRALRPCGRPGLPGKEGTAG 33

to top

>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 10  PHGISSAPRP-NPSLESTPRVPSSPGKDG-RSVGRSIGRIPPADPASGMSSPQDP 168
           P G    P P  PS    P +P  PGK G R +    G I PA    G+  P+ P
Sbjct: 90  PQGQPGLPGPPGPSATGKPGLPGLPGKQGERGLNGPKGDIGPA----GLPGPRGP 140

to top

>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)|
           (Itch) (Atrophin-1-interacting protein 4) (AIP4)
           (NFE2-associated polypeptide 1) (NAPP1)
          Length = 903

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +1

Query: 22  SSAPRPNPSLESTPRVPSS----PGKDGRSVGRSIGRIPPADPASGMS 153
           S  PRP+     TPR P+S    P     S G S G +PP +  +  S
Sbjct: 251 SRPPRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 298

to top

>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2
          Length = 863

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRS----VGRSIGRIPPADPASGMSSPQDP 168
           A P  +  A  P P   S P  PSSP     S     G    R+ PA PA  +S    P
Sbjct: 733 APPGPLPPAASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLSRASRP 791

to top

>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2) (Hyperpolarization-activated
           cation channel 1) (HAC-1)
          Length = 863

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRS----VGRSIGRIPPADPASGMSSPQDP 168
           A P  +  A  P P   S P  PSSP     S     G    R+ PA PA  +S    P
Sbjct: 733 APPGPLPPAASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLSRASRP 791

to top

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = +1

Query: 10   PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
            P  ++  P   PSL ++P  P SPG     V     R   A  A+  + P  P
Sbjct: 1308 PAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPP 1360

to top

>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRSV----GRSIGRIPPADPASGMSSPQDP 168
           ++P G   A  P P+  ++P   SSP  D  SV    G + G + PA   +      DP
Sbjct: 6   SQPAGGRGATAPRPADAASPSCGSSPSADSLSVVLAGGGTAGHVEPAMAVADALVALDP 64

to top

>TAF10_HUMAN (Q12962) Transcription initiation factor TFIID subunit 10|
           (Transcription initiation factor TFIID 30 kDa subunit)
           (TAF(II)30) (TAFII-30) (TAFII30) (STAF28)
          Length = 218

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSP 159
           A P   +SAP P P + +   +PSS   + ++        P A  A+G + P
Sbjct: 12  AAPASAASAPGPAPPVSAPAALPSSTAAENKASPAGTAGGPGAGAAAGGTGP 63

to top

>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)|
          Length = 864

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 22  SSAPRPNPSLESTPRVPSS----PGKDGRSVGRSIGRIPPAD 135
           S  PRP+     TPR P+S    P  +  S G S G +PP +
Sbjct: 210 SRPPRPSRPPPPTPRRPASVNGSPSTNSDSDGSSTGSLPPTN 251

to top

>STE20_CANAL (Q92212) Serine/threonine-protein kinase STE20 homolog (EC|
           2.7.11.1)
          Length = 1230

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 31  PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS 153
           P  + + + TPR P+S  ++G+ +       PP+ P S MS
Sbjct: 624 PHEDNATQYTPRTPTSHVQEGQFIPSRPAPKPPSTPLSSMS 664

to top

>FIB1_ADEG1 (Q64761) Fiber protein 1|
          Length = 710

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   TAEPHGISSAPRPNPSLESTPRVPSSPGKDGRSVG 105
           TA+  GIS +  P P++ ++P +  + G+ G S+G
Sbjct: 238 TADADGISVSVAPTPTISASPPLTYTNGQIGLSIG 272

to top

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 10   PHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSP 159
            P G ++AP P PS    P  P+SP  D     ++   +PP  P SG   P
Sbjct: 1540 PTGTAAAPAPTPSPAGGPD-PTSPSSDS-GTAQAAPPLPP-PPESGPGQP 1586

to top

>MYLK2_RABIT (P07313) Myosin light chain kinase 2, skeletal/cardiac muscle (EC|
           2.7.11.18) (MLCK2)
          Length = 607

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 37  PNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS 153
           P PS       PS+P KD  +     G + PA P++G S
Sbjct: 44  PGPSDTKQDPDPSTPKKDANTPAPEKGDVVPAQPSAGGS 82

to top

>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 43  PSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQDP 168
           P L+  P VP  PG  G      +   P      G++ PQ P
Sbjct: 818 PGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGP 859

to top

>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRSV----GRSIGRIPPADPASGMSSPQDP 168
           ++P G   A  P P+  ++P   SSP  D  SV    G + G + PA   +      DP
Sbjct: 6   SQPAGGRGATAPRPADAASPSCGSSPSADSVSVVLAGGGTAGHVEPAMAVADALVALDP 64

to top

>OTU_DROME (P10383) Protein ovarian tumor locus|
          Length = 853

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +1

Query: 22  SSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSSPQD-PF 171
           S+AP P   +   P +PS P           G +PP  PAS M+  ++ PF
Sbjct: 517 SAAPPPTQYMNYVPMIPSRP-----------GHLPPPWPASPMAIAEEFPF 556

to top

>CHIA_ECOLI (P13656) Probable bifunctional chitinase/lysozyme precursor|
           [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC
           3.2.1.17)]
          Length = 897

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   TAEPHGISSAPRPNPSLESTPRVPSSP 81
           T+ P   +SAP+P+P ++  P V  +P
Sbjct: 187 TSNPQSCTSAPQPSPDVKPAPDVKPAP 213

to top

>SYW_THEMA (Q9WYW2) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 328

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 31  PRPNPSLESTPRVPSSPGKDGRSVGRSIGRI 123
           P P   L    RVP  PG DGR + +S G I
Sbjct: 174 PEPEAILS---RVPKLPGTDGRKMSKSYGNI 201

to top

>VGLB_BHV2B (P12641) Glycoprotein B-1 precursor|
          Length = 917

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 28  APRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPA 141
           APR +     TP+VP+ PG      G +     PADPA
Sbjct: 84  APRASRDAPGTPKVPAMPGVTPEPSGNA---SEPADPA 118

to top

>H1_MAIZE (P23444) Histone H1|
          Length = 245

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 19  ISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIP-PADPAS 144
           +SSA +PNP  ++ P+ P +  K  ++  +   + P  A PA+
Sbjct: 116 LSSATKPNPKPKAAPKKPKTGAKKPKAAAKPKAKTPAKAKPAT 158

to top

>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
            protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
            ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
            sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 31   PRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMS 153
            P P P+   TP    SPGK         G+ PP  P    S
Sbjct: 992  PPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSS 1032

to top

>IF2_SYMTH (Q67P86) Translation initiation factor IF-2|
          Length = 1044

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 20/51 (39%), Positives = 23/51 (45%)
 Frame = +1

Query: 4   AEPHGISSAPRPNPSLESTPRVPSSPGKDGRSVGRSIGRIPPADPASGMSS 156
           AE      A  P  S  S P VP+ PG+  R  G  IG   P  PA+G  S
Sbjct: 275 AERREEPQAEAPQTSGPSRP-VPAGPGQPARPAGSGIG--VPVKPAAGGKS 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.129    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,262,993
Number of Sequences: 219361
Number of extensions: 575712
Number of successful extensions: 1889
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result