| Clone Name | baal12l13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009109.1| Triticum aestivum clone wl1.pk0003.h12:fis, full insert mRNA sequence Length = 1084 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 135 tccggcctccggcatgagctccccgcaggaccccttcta 173 |||||| |||| |||||||||| |||||||||||||||| Sbjct: 477 tccggcgtccgccatgagctccgcgcaggaccccttcta 515
>emb|AJ402805.1|SSA402805 Salmo salar microsatellite DNA, clone 30C7UOS Length = 306 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 87 ggacggacggtcggttggtcggtcgatcggtcg 119 ||||||||||||||| ||||||||| ||||||| Sbjct: 134 ggacggacggtcggtcggtcggtcggtcggtcg 166
>ref|XM_540885.2| PREDICTED: Canis familiaris similar to FK506-binding protein 2 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (13 kDa FKBP) (FKBP-13), transcript variant 1 (LOC483764), mRNA Length = 1377 Score = 46.1 bits (23), Expect = 0.035 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcgatcgg 116 ||||||||||||||||||||||| Sbjct: 69 cggtcggttggtcggtcgatcgg 91
>gb|AC007976.4| Drosophila melanogaster, chromosome 2L, region 22C-22D, BAC clone BACR01K07, complete sequence Length = 175867 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Plus Query: 91 ggacggtcggttggtcggtcgatcggt 117 ||||||||||||||||||||| ||||| Sbjct: 94299 ggacggtcggttggtcggtcggtcggt 94325
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Plus Query: 95 ggtcggttggtcggtcgatcggtcgaa 121 ||||||| ||||||||||||||||||| Sbjct: 73565 ggtcggtcggtcggtcgatcggtcgaa 73591
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Plus Query: 95 ggtcggttggtcggtcgatcggtcgaa 121 ||||||| ||||||||||||||||||| Sbjct: 18301 ggtcggtcggtcggtcgatcggtcgaa 18327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Minus Query: 95 ggtcggttggtcggtcgatcggtcgaa 121 ||||||| ||||||||||||||||||| Sbjct: 17174035 ggtcggtcggtcggtcgatcggtcgaa 17174009
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Plus Query: 91 ggacggtcggttggtcggtcgatcggt 117 ||||||||||||||||||||| ||||| Sbjct: 295490 ggacggtcggttggtcggtcggtcggt 295516
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.035 Identities = 26/27 (96%) Strand = Plus / Minus Query: 95 ggtcggttggtcggtcgatcggtcgaa 121 ||||||| ||||||||||||||||||| Sbjct: 17183075 ggtcggtcggtcggtcgatcggtcgaa 17183049
>emb|AJ402745.1|SSA402745 Salmo salar microsatellite DNA, clone 17F2UOS Length = 457 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggtcg 119 |||||||| ||||||||||||||||| Sbjct: 376 cggtcggtcggtcggtcgatcggtcg 351
>emb|CR732858.2|CNS0GSEJ Tetraodon nigroviridis full-length cDNA Length = 1319 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggtcg 119 |||||||| ||||||||||||||||| Sbjct: 603 cggtcggtcggtcggtcgatcggtcg 578
>gb|AC171138.2| Helobdella robusta clone CH306-1A9, complete sequence Length = 97729 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggtcg 119 |||||||| ||||||||||||||||| Sbjct: 20153 cggtcggtcggtcggtcgatcggtcg 20128
>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence Length = 230610 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Plus Query: 90 cggacggtcggttggtcggtcgatcggtcg 119 |||||||||||| ||||||||| ||||||| Sbjct: 201682 cggacggtcggtcggtcggtcggtcggtcg 201711
>emb|BX247875.6| Zebrafish DNA sequence from clone CH211-201N18, complete sequence Length = 213093 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcgatcggtcg 119 |||||||||||||||||| ||||||| Sbjct: 116652 cggtcggttggtcggtcggtcggtcg 116677
>emb|AL645842.15| Mouse DNA sequence from clone RP23-20A9 on chromosome 11 Contains two novel genes and the 3' end of the Accn1 gene for neuronal amiloride-sensitive cation channel 1 (degenerin), complete sequence Length = 114190 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ggtcggttggtcggtcgatcggtcg 119 ||||||||||||||||| ||||||| Sbjct: 94551 ggtcggttggtcggtcggtcggtcg 94527
>emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 in linkage group 14, complete sequence Length = 156128 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggtc 118 |||||||||||||||||| |||||| Sbjct: 15401 cggtcggttggtcggtcggtcggtc 15377
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggtcggttggtcggtcgatcggtcg 119 ||||||||||||||||| ||||||| Sbjct: 16469 ggtcggttggtcggtcggtcggtcg 16493
>emb|BX571819.6| Zebrafish DNA sequence from clone CH211-105H3 in linkage group 24, complete sequence Length = 118635 Score = 42.1 bits (21), Expect = 0.54 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 ggacggtcggttggtcggtcgatcggtcg 119 ||||||||||| ||||||||| ||||||| Sbjct: 40901 ggacggtcggtcggtcggtcggtcggtcg 40929
>dbj|AB227388.1| Aspergillus oryzae cDNA, contig sequence: AoEST4255 Length = 914 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 tcgtcgccgggaaaggacgga 93 ||||||||||||||||||||| Sbjct: 814 tcgtcgccgggaaaggacgga 794
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 tcgtcgccgggaaaggacgga 93 ||||||||||||||||||||| Sbjct: 79034 tcgtcgccgggaaaggacgga 79054
>gb|AF372568.1|AF372568 Taenia solium clone F5X-9 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 744 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggtcggttggtcggtcgatcggtcg 119 ||||||||||||||||| ||||||| Sbjct: 592 ggtcggttggtcggtcggtcggtcg 616
>emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in linkage group 14, complete sequence Length = 201070 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggtc 118 |||||||||||||||||| |||||| Sbjct: 77407 cggtcggttggtcggtcggtcggtc 77383
>gb|AC084663.1|CBRG47C05 Caenorhabditis briggsae cosmid G47C05, complete sequence Length = 35766 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ggtcggttggtcggtcgatcggtcg 119 ||||||||||||||||| ||||||| Sbjct: 10935 ggtcggttggtcggtcggtcggtcg 10911
>emb|BX247886.7| Zebrafish DNA sequence from clone DKEY-253J12 in linkage group 24, complete sequence Length = 149992 Score = 42.1 bits (21), Expect = 0.54 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 ggacggtcggttggtcggtcgatcggtcg 119 ||||||||||| ||||||||| ||||||| Sbjct: 115573 ggacggtcggtcggtcggtcggtcggtcg 115601
>emb|AL669991.1|NCB11B23 Neurospora crassa DNA linkage group II BAC clone B11B23 Length = 79554 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gacggacggtcggttggtcggtcg 111 |||||||||||||| ||||||||| Sbjct: 28837 gacggacggtcggtcggtcggtcg 28814
>gb|AF372569.1|AF372569 Taenia solium clone E15X-32 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 724 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 577 gtcggttggtcggtcggtcggtcg 600
>gb|AF372567.1|AF372567 Taenia solium clone F5X-3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372566.1|AF372566 Taenia solium clone E15X-11 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372565.1|AF372565 Taenia solium clone E15X-10 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372563.1|AF372563 Taenia solium clone C18X-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 742 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372562.1|AF372562 Taenia solium clone B6X-7 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 734 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372561.1|AF372561 Taenia solium clone A1X-2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372560.1|AF372560 Taenia solium clone C18X-2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 736 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 573 gtcggttggtcggtcggtcggtcg 596
>gb|AF372559.1|AF372559 Taenia solium clone B6X-6 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 736 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 573 gtcggttggtcggtcggtcggtcg 596
>gb|AF372558.1|AF372558 Taenia solium clones A1X-6 and A1X-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 734 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372557.1|AF372557 Taenia solium clones B6X-4 and B6X-2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372556.1|AF372556 Taenia solium clones A1X-4 and A1X-3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372555.1|AF372555 Taenia solium clone E15X-12 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372554.1|AF372554 Taenia solium clones C18X-6 and C18X-5 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372553.1|AF372553 Taenia solium clone C4X-3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>gb|AF372552.1|AF372552 Taenia solium clone B6X-8 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 575 gtcggttggtcggtcggtcggtcg 598
>emb|BX682548.7| Zebrafish DNA sequence from clone DKEY-94A14 in linkage group 2, complete sequence Length = 111741 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cggtcggttggtcggtcgatcggt 117 |||||||||||||||||| ||||| Sbjct: 51229 cggtcggttggtcggtcggtcggt 51206
>dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-122K03, complete sequence Length = 173324 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gtcggttggtcggtcgatcggtcg 119 |||||||||||||||| ||||||| Sbjct: 95662 gtcggttggtcggtcggtcggtcg 95639
>emb|AJ292377.1|EGR292377 Echinococcus granulosus spliced leader sequence and spliced leader exon Length = 1554 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 cggacggtcggttggtcggtcgatcggt 117 |||||||||||| ||||||||| ||||| Sbjct: 553 cggacggtcggtcggtcggtcggtcggt 526
>ref|NM_114184.1| Arabidopsis thaliana unknown protein AT3G43160 mRNA, complete cds Length = 888 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 cggacggtcggttggtcgg 108 ||||||||||||||||||| Sbjct: 564 cggacggtcggttggtcgg 546
>ref|XM_465735.1| Oryza sativa (japonica cultivar-group), mRNA Length = 630 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 ccacccgcggatccggcctccgg 146 ||||||||||||| ||||||||| Sbjct: 483 ccacccgcggatctggcctccgg 461
>ref|NM_001030953.1| Gallus gallus squalene epoxidase (SQLE), mRNA Length = 2659 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ctcctccgcgccgcgccca 39 ||||||||||||||||||| Sbjct: 175 ctcctccgcgccgcgccca 157
>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence Length = 209416 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 97 tcggttggtcggtcgatcggtcg 119 ||||||||||||||| ||||||| Sbjct: 71374 tcggttggtcggtcggtcggtcg 71352
>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence Length = 165177 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcgatcgg 116 |||||||| |||||||||||||| Sbjct: 90023 cggtcggtcggtcggtcgatcgg 90045
>gb|AF292516.1| Zea mays subsp. parviglumis cultivar PI331783 granule-bound starch synthase (waxy) gene, partial cds Length = 1365 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 1194 tggtcggtcgatcggtcga 1176
>gb|AF292502.1| Zea mays cultivar landrace Coroico granule-bound starch synthase (waxy) gene, partial cds Length = 1353 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 1182 tggtcggtcgatcggtcga 1164
>gb|AE009107.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 133 of 256 of the complete sequence Length = 12377 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 agggttccttcgtcgccgg 82 ||||||||||||||||||| Sbjct: 5868 agggttccttcgtcgccgg 5886
>gb|AF544099.1| Zea mays subsp. mays cultivar W153R granule-bound starch synthase (waxy1) gene, partial sequence Length = 4433 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3910 tggtcggtcgatcggtcga 3892
>gb|AF544092.1| Zea mays subsp. mays cultivar NC260 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4287 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3764 tggtcggtcgatcggtcga 3746
>gb|AF544091.1| Zea mays subsp. mays cultivar N28Ht granule-bound starch synthase (waxy1) gene, partial sequence Length = 4477 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3954 tggtcggtcgatcggtcga 3936
>gb|AF544084.1| Zea mays subsp. mays cultivar IDS28 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4433 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3910 tggtcggtcgatcggtcga 3892
>gb|AF544083.1| Zea mays subsp. mays cultivar I205 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4444 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3921 tggtcggtcgatcggtcga 3903
>gb|AF544071.1| Zea mays subsp. mays cultivar B14A granule-bound starch synthase (waxy1) gene, partial sequence Length = 4467 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 3944 tggtcggtcgatcggtcga 3926
>gb|AY995802.1| Ammophila heydeni long-wavelength rhodopsin gene, partial cds Length = 619 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 97 tcggttggtcggtcgatcggtcgaatc 123 ||||| ||||||||||||| ||||||| Sbjct: 226 tcggtcggtcggtcgatcgatcgaatc 200
>emb|BX927092.21| Zebrafish DNA sequence from clone CH211-69I15 in linkage group 1, complete sequence Length = 108803 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 ggttggtcggtcgatcggt 117 ||||||||||||||||||| Sbjct: 39118 ggttggtcggtcgatcggt 39136
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 gggttccttcgtcgccggg 83 ||||||||||||||||||| Sbjct: 653250 gggttccttcgtcgccggg 653232
>gb|AC122857.2| Mus musculus BAC clone RP23-125A8 from 2, complete sequence Length = 221951 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcga 112 ||||||||||||||||||| Sbjct: 108167 cggtcggttggtcggtcga 108185
>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence Length = 163125 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 97 tcggttggtcggtcgatcggtcg 119 ||||||||||||||| ||||||| Sbjct: 13695 tcggttggtcggtcggtcggtcg 13717
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15 Length = 110800 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 cggacggtcggttggtcgg 108 ||||||||||||||||||| Sbjct: 3395 cggacggtcggttggtcgg 3377
>emb|AJ720030.1| Gallus gallus mRNA for hypothetical protein, clone 9l3 Length = 2659 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ctcctccgcgccgcgccca 39 ||||||||||||||||||| Sbjct: 175 ctcctccgcgccgcgccca 157
>gb|DQ369879.1| Zea mays cultivar line X2 waxy gene, partial sequence Length = 1350 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 1180 tggtcggtcgatcggtcga 1162
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 agggttccttcgtcgccgg 82 ||||||||||||||||||| Sbjct: 1470241 agggttccttcgtcgccgg 1470259
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 ccacccgcggatccggcctccgg 146 ||||||||||||| ||||||||| Sbjct: 17198335 ccacccgcggatctggcctccgg 17198313
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 cccacccgcggatccggcc 141 ||||||||||||||||||| Sbjct: 33277094 cccacccgcggatccggcc 33277112 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 ccacccgcggatccggcctccgg 146 ||||||||||||| ||||||||| Sbjct: 17101148 ccacccgcggatctggcctccgg 17101126
>emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 in linkage group 12, complete sequence Length = 172778 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 ggtcggttggtcggtcgat 113 ||||||||||||||||||| Sbjct: 125163 ggtcggttggtcggtcgat 125145
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 tcgccgggaaaggacggac 94 ||||||||||||||||||| Sbjct: 1626271 tcgccgggaaaggacggac 1626289
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 ccacccgcggatccggcctccgg 146 ||||||||||||| ||||||||| Sbjct: 82521 ccacccgcggatctggcctccgg 82499
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 cccacccgcggatccggcc 141 ||||||||||||||||||| Sbjct: 106403 cccacccgcggatccggcc 106421
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 cccacccgcggatccggcc 141 ||||||||||||||||||| Sbjct: 17844 cccacccgcggatccggcc 17862
>emb|X03935.1|ZMWAXY Zea mays waxy (wx+) locus for UDP-glucose starch glycosyl transferase Length = 4800 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tggtcggtcgatcggtcga 120 ||||||||||||||||||| Sbjct: 4171 tggtcggtcgatcggtcga 4153
>emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-262P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181004 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 cctccggcatgagctcccc 158 ||||||||||||||||||| Sbjct: 150991 cctccggcatgagctcccc 150973
>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete sequence Length = 229685 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcgatcgg 116 |||||||| |||||||||||||| Sbjct: 60884 cggtcggtcggtcggtcgatcgg 60906
>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214527 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 cctccggcatgagctcccc 158 ||||||||||||||||||| Sbjct: 6939 cctccggcatgagctcccc 6921
>gb|L28101.1|HUMKALLIST Homo sapiens kallistatin (PI4) gene, exons 1-4, complete cds Length = 9618 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 cctccggcatgagctcccc 158 ||||||||||||||||||| Sbjct: 1556 cctccggcatgagctcccc 1538
>emb|AL928914.15| Mouse DNA sequence from clone RP23-399J8 on chromosome 2, complete sequence Length = 199873 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 cggtcggttggtcggtcga 112 ||||||||||||||||||| Sbjct: 149726 cggtcggttggtcggtcga 149744
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 ccacccgcggatccggcctccgg 146 ||||||||||||| ||||||||| Sbjct: 142632 ccacccgcggatctggcctccgg 142610
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 tcgccgggaaaggacggac 94 ||||||||||||||||||| Sbjct: 1303279 tcgccgggaaaggacggac 1303297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 663,418 Number of Sequences: 3902068 Number of extensions: 663418 Number of successful extensions: 45146 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44734 Number of HSP's gapped (non-prelim): 412 length of query: 173 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 151 effective length of database: 17,147,199,772 effective search space: 2589227165572 effective search space used: 2589227165572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)