>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  364 bits (935), Expect = e-101
 Identities = 178/179 (99%), Positives = 178/179 (99%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           DAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG
Sbjct: 249 DAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 308

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD
Sbjct: 309 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 368

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 369 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  333 bits (855), Expect = 2e-91
 Identities = 156/179 (87%), Positives = 171/179 (95%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           DAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 246 DAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 305

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+
Sbjct: 306 IFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSRE 365

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 366 GPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  330 bits (846), Expect = 2e-90
 Identities = 154/179 (86%), Positives = 170/179 (94%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKG
Sbjct: 249 DNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKG 308

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+
Sbjct: 309 IFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSRE 368

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 369 GPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  318 bits (816), Expect = 5e-87
 Identities = 148/179 (82%), Positives = 168/179 (93%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC G
Sbjct: 259 DNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIG 318

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++
Sbjct: 319 IFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKE 378

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 379 GPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  317 bits (811), Expect = 2e-86
 Identities = 146/178 (82%), Positives = 168/178 (94%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 255 DNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 314

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++
Sbjct: 315 IFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKE 374

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 536
           GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 375 GPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  315 bits (808), Expect = 5e-86
 Identities = 147/179 (82%), Positives = 166/179 (92%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 259 DNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 318

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++
Sbjct: 319 IFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKE 378

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 379 GPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  315 bits (807), Expect = 6e-86
 Identities = 146/177 (82%), Positives = 166/177 (93%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 259 DNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 318

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++
Sbjct: 319 IFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKE 378

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 533
           GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 379 GPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  313 bits (801), Expect = 3e-85
 Identities = 149/177 (84%), Positives = 165/177 (93%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 263 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 322

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS D
Sbjct: 323 IFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFD 382

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 533
           GP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 383 GPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  311 bits (797), Expect = 8e-85
 Identities = 148/175 (84%), Positives = 165/175 (94%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 258 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 317

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRD
Sbjct: 318 IFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRD 377

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 527
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 378 GPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  307 bits (786), Expect = 2e-83
 Identities = 147/178 (82%), Positives = 160/178 (89%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC G
Sbjct: 263 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTG 322

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS D
Sbjct: 323 IFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFD 382

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 536
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 383 GPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  303 bits (777), Expect = 2e-82
 Identities = 138/178 (77%), Positives = 165/178 (92%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKG
Sbjct: 261 DNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKG 320

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++
Sbjct: 321 IFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKE 380

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 536
           GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 381 GPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  303 bits (776), Expect = 2e-82
 Identities = 144/179 (80%), Positives = 161/179 (89%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 259 DNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 318

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+
Sbjct: 319 IFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSRE 378

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 379 GPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  302 bits (773), Expect = 5e-82
 Identities = 141/179 (78%), Positives = 162/179 (90%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC G
Sbjct: 257 DNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTG 316

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+D
Sbjct: 317 IFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKD 376

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 539
           GP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 377 GPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  294 bits (752), Expect = 1e-79
 Identities = 134/178 (75%), Positives = 163/178 (91%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKG
Sbjct: 263 DNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKG 322

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++
Sbjct: 323 IFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKE 382

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 536
           GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 383 GPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  266 bits (679), Expect = 4e-71
 Identities = 123/154 (79%), Positives = 139/154 (90%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C G
Sbjct: 256 DNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTG 315

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++
Sbjct: 316 IFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKE 375

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 464
            P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 376 SPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  228 bits (582), Expect = 7e-60
 Identities = 112/164 (68%), Positives = 129/164 (78%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PTNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC G
Sbjct: 232 DNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMG 291

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R 
Sbjct: 292 IFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ 351

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 494
             V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 352 -KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  188 bits (477), Expect = 1e-47
 Identities = 86/158 (54%), Positives = 114/158 (72%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+  G
Sbjct: 132 DNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGG 191

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +
Sbjct: 192 IFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLE 251

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 476
           GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 252 GPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  183 bits (464), Expect = 3e-46
 Identities = 85/158 (53%), Positives = 112/158 (70%)
 Frame = +3

Query: 3   DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKG 182
           D PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+  G
Sbjct: 132 DNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGG 191

Query: 183 IFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 362
           IF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS +
Sbjct: 192 IFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLE 251

Query: 363 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 476
            P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 252 APPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 225 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 404
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = -1

Query: 536  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 357
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 356  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 186
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 185  -DTLADTDTVVTGGSPVELLHTTITD 111
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 222 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 401
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 402 KLLEYGHMLVQEQDNVKRV 458
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 308 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 183
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 221 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 87
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 86  IV 81
           I+
Sbjct: 585 IL 586

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 472 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 368
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 221 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 87
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 86  IV 81
           I+
Sbjct: 585 IL 586

>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 221 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 87
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 86  IV 81
           I+
Sbjct: 585 IL 586

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 306 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 413
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
 Frame = +3

Query: 369 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 524
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 525 GSFYG*KILHTHP 563
           GSF    I+  HP
Sbjct: 338 GSFTAQVIILNHP 350

>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 210 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 380
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280

>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 191 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 81
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 191 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 81
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -1

Query: 344 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 192
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 191 LEDTLA 174
             D  A
Sbjct: 200 AADAPA 205

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 198 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 374
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 375 FEQPKMTVEKLLEYGHM 425
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,034,549
Number of Sequences: 219361
Number of extensions: 1643937
Number of successful extensions: 5699
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5694
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)