ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal12l11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1074 bits (542), Expect = 0.0 Identities = 568/576 (98%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 1 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtg 60 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 884 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtg 943 Query: 61 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 1003 Query: 121 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 1063 Query: 181 gtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcc 240 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1064 gtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcc 1123 Query: 241 caggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 caggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgc 1183 Query: 301 gcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1184 gcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggg 1243 Query: 361 acgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1244 acgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggc 1303 Query: 421 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1304 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 1363 Query: 481 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggtt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1364 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggtt 1423 Query: 541 agaaaattctncatac-acacccaccatnttttgct 575 |||||||||| ||||| ||||||||||| | ||||| Sbjct: 1424 agaaaattctccatacaacacccaccatctcttgct 1459
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 1037 bits (523), Expect = 0.0 Identities = 535/539 (99%) Strand = Plus / Plus Query: 1 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtg 60 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 629 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtg 688 Query: 61 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 748 Query: 121 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 808 Query: 181 gtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcc 240 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 809 gtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcc 868 Query: 241 caggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 caggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgc 928 Query: 301 gcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 gcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggg 988 Query: 361 acgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 acgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggc 1048 Query: 421 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 1108 Query: 481 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 1167
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 938 bits (473), Expect = 0.0 Identities = 549/575 (95%) Strand = Plus / Plus Query: 1 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtg 60 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 804 ccgatgcccccaccaatgtgcagctcccaggcatgtacaacaaggaggagaacccacgtg 863 Query: 61 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 120 |||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 864 tgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatg 923 Query: 121 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 180 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 924 gtcgtatggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagg 983 Query: 181 gtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcc 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 984 gtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcc 1043 Query: 241 caggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgc 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1044 caggacaatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgc 1103 Query: 301 gcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggg 360 |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 1104 gcaagtgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcggg 1163 Query: 361 acgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggc 420 |||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1164 acggaccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacgggc 1223 Query: 421 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1224 acatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatga 1283 Query: 481 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggtt 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1284 gccaggcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggtt 1343 Query: 541 agaaaattctncatacacacccaccatnttttgct 575 |||| ||||| |||||||||||||||| | ||||| Sbjct: 1344 agaacattctccatacacacccaccatctcttgct 1378
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 860 bits (434), Expect = 0.0 Identities = 504/528 (95%) Strand = Plus / Plus Query: 48 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 107 |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 1 gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60 Query: 108 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 167 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120 Query: 168 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 227 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180 Query: 228 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 287 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240 Query: 288 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 347 ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300 Query: 348 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 407 ||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360 Query: 408 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420 Query: 468 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 480 Query: 528 tccttctacggttagaaaattctncatacacacccaccatnttttgct 575 |||||||||||||||| ||||| |||||||||||||||| | ||||| Sbjct: 481 accttctacggttagaacattctccatacacacccaccatctcttgct 528
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 729 bits (368), Expect = 0.0 Identities = 504/550 (91%) Strand = Plus / Plus Query: 9 cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 68 |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 823 cccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgtgtccccatc 882 Query: 69 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 128 |||||||||| ||||| ||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 883 atcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatg 942 Query: 129 gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 ||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||| Sbjct: 943 gagaagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttc 1002 Query: 189 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 248 ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1003 cagaccgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttcccaggacag 1062 Query: 249 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 308 ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1063 tccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgg 1122 Query: 309 gtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggccc 368 || || |||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1123 gtgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggaccc 1182 Query: 369 gtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctc 428 || |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| Sbjct: 1183 gtcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgctt 1242 Query: 429 gtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggca 488 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1243 gtccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggca 1302 Query: 489 gctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaatt 548 |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 1303 gctctgggtgatgcgaacaaggatgccatgaagactggttccttctacggttagaacact 1362 Query: 549 ctncatacac 558 || ||||||| Sbjct: 1363 cttcatacac 1372
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 666 bits (336), Expect = 0.0 Identities = 482/531 (90%) Strand = Plus / Plus Query: 9 cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 68 ||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 833 cccaccaacgtgcagcttccggggatgtacaacaaggaggagaacccccgtgttcccatt 892 Query: 69 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 128 | |||||||| ||||| || |||||||| ||||| || || || | ||| ||||||||| Sbjct: 893 atngtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatg 952 Query: 129 gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||| Sbjct: 953 gagaagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttc 1012 Query: 189 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 248 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 cagaccgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacag 1072 Query: 249 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 308 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1073 tccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgg 1132 Query: 309 gtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggccc 368 || || |||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1133 gtgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggaccc 1192 Query: 369 gtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctc 428 || |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| Sbjct: 1193 gtcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgctt 1252 Query: 429 gtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggca 488 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1253 gtccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggca 1312 Query: 489 gctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 539 |||||||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 1313 gctctgggtgatgcgaacaaggatgccatgaagactggttccttctacggt 1363
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 617 bits (311), Expect = e-173 Identities = 318/321 (99%) Strand = Plus / Plus Query: 255 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 315 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 495 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctncat 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320 Query: 555 acacacccaccatnttttgct 575 ||||||||||||| | ||||| Sbjct: 7321 acacacccaccatctcttgct 7341 Score = 490 bits (247), Expect = e-135 Identities = 253/255 (99%) Strand = Plus / Plus Query: 1 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtg 60 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6626 ccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtg 6685 Query: 61 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6686 tgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatg 6745 Query: 121 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6746 gtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagg 6805 Query: 181 gtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6806 gtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcc 6865 Query: 241 caggacaatccattg 255 ||||||||||||||| Sbjct: 6866 caggacaatccattg 6880 Score = 274 bits (138), Expect = 3e-70 Identities = 264/306 (86%) Strand = Plus / Plus Query: 9 cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 68 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 3507 cccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 3566 Query: 69 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 128 |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 3567 atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatg 3626 Query: 129 gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 ||||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 3627 gagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttc 3686 Query: 189 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 248 | |||||||| ||| |||||| | || || | | | || ||||||||||| || || Sbjct: 3687 cgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcag 3746 Query: 249 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 308 ||||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||| Sbjct: 3747 tccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 3806 Query: 309 gtcggc 314 |||||| Sbjct: 3807 gtcggc 3812 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 435 gagcaggacaatgtcaagcgtgtgcagct 463 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 515 bits (260), Expect = e-143 Identities = 295/307 (96%) Strand = Plus / Plus Query: 255 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 314 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 315 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 374 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 495 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctncat 554 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301 Query: 555 acacacc 561 ||||||| Sbjct: 302 acacacc 308
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 299 bits (151), Expect = 5e-78 Identities = 262/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| || Sbjct: 819 accaacgtgcagctccctgggatgtacaacaaggaggacaacccccgtgtccccatcatc 878 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 879 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 938 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 939 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 998 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 999 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1058 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1059 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 788 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 847 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 848 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 907 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 908 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 967 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 968 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1027 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1028 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 783 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 842 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 843 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 902 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 903 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 962 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 963 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1022 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1023 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 507 caggatgcgatgaagactggttccttctacgg 538 || || ||||||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 37 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 96 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 97 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 156 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 157 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 216 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 217 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 276 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 277 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 335 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 831 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 890 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 891 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 950 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 951 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1010 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1011 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1070 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1071 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 782 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 841 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 842 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 901 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 902 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 961 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 962 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1021 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1022 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 820 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 879 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 880 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 939 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 940 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 999 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1000 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1059 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1060 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 603 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 662 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 663 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 722 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 723 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 782 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 783 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 842 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 843 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 824 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 883 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 884 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 943 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 944 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1003 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1004 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1063 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1064 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 507 caggatgcgatgaagactggttccttctacggtt 540 || || ||||||||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 291 bits (147), Expect = 1e-75 Identities = 261/299 (87%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 818 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 877 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 878 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 937 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 938 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 997 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 998 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1057 Query: 252 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1058 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 507 caggatgcgatgaagactggttccttctacgg 538 || || ||||||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 276 bits (139), Expect = 8e-71 Identities = 376/455 (82%) Strand = Plus / Plus Query: 9 cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 68 ||||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||| Sbjct: 788 cccaccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgcgtgcccatc 847 Query: 69 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 128 |||||||||| ||||| ||||||||||| ||||| || || ||||| || || || ||| Sbjct: 848 atcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatg 907 Query: 129 gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 ||||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 908 gagaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttc 967 Query: 189 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 248 | |||||||| ||| |||||| | || || | | | || ||||||||||| || || Sbjct: 968 cgcaccgacaacgtccccgacgaggccgtggtgaggctggtggacaccttcccggggcag 1027 Query: 249 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 308 ||||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||| Sbjct: 1028 tccatcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgg 1087 Query: 309 gtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggccc 368 |||||| | ||| |||||||||| |||| |||| || ||||| |||| ||||| Sbjct: 1088 gtcggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccagggaggggccg 1147 Query: 369 gtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctc 428 ||| ||||| ||||| |||||||| |||||||||| | |||||||| |||||||| Sbjct: 1148 ccgacgttcgaccagcccaagatgaccatcgagaagctcatggagtacggccacatgctg 1207 Query: 429 gtccaggagcaggacaatgtcaagcgtgtgcagct 463 |||||||||||||| || || ||||| |||||||| Sbjct: 1208 gtccaggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 274 bits (138), Expect = 3e-70 Identities = 264/306 (86%) Strand = Plus / Plus Query: 9 cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 68 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 938 cccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 997 Query: 69 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 128 |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 998 atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatg 1057 Query: 129 gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 ||||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 1058 gagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttc 1117 Query: 189 cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 248 | |||||||| ||| |||||| | || || | | | || ||||||||||| || || Sbjct: 1118 cgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcag 1177 Query: 249 tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 308 ||||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||| Sbjct: 1178 tccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 1237 Query: 309 gtcggc 314 |||||| Sbjct: 1238 gtcggc 1243 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 435 gagcaggacaatgtcaagcgtgtgcagct 463 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 250 bits (126), Expect = 4e-63 Identities = 213/242 (88%) Strand = Plus / Minus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 108929 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 108870 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 108869 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 108810 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 108809 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 108750 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 108749 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 108690 Query: 252 at 253 || Sbjct: 108689 at 108688 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 507 caggatgcgatgaagactggttccttctacggttaga 543 || || |||||||||||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 126 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 185 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 186 ttcc 189 |||| Sbjct: 112459 ttcc 112456 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 8 ccccaccaacgtgcagctccctggcatgtacaac 41 ||||||||||||||||||||| || ||||||||| Sbjct: 112610 ccccaccaacgtgcagctcccagggatgtacaac 112577 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 261 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactc 355 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 250 bits (126), Expect = 4e-63 Identities = 213/242 (88%) Strand = Plus / Minus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 30806 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 30747 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 30746 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 30687 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 30686 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 30627 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 30626 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 30567 Query: 252 at 253 || Sbjct: 30566 at 30565 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 507 caggatgcgatgaagactggttccttctacggttaga 543 || || |||||||||||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 126 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 185 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 186 ttcc 189 |||| Sbjct: 34336 ttcc 34333 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 8 ccccaccaacgtgcagctccctggcatgtacaac 41 ||||||||||||||||||||| || ||||||||| Sbjct: 34487 ccccaccaacgtgcagctcccagggatgtacaac 34454 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 261 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactc 355 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 250 bits (126), Expect = 4e-63 Identities = 213/242 (88%) Strand = Plus / Minus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 28304068 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 28304009 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 28304008 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28303949 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28303948 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28303889 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 28303888 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28303829 Query: 252 at 253 || Sbjct: 28303828 at 28303827 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 507 caggatgcgatgaagactggttccttctacggttaga 543 || || |||||||||||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 126 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 185 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 186 ttcc 189 |||| Sbjct: 28307598 ttcc 28307595 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 8 ccccaccaacgtgcagctccctggcatgtacaac 41 ||||||||||||||||||||| || ||||||||| Sbjct: 28307749 ccccaccaacgtgcagctcccagggatgtacaac 28307716 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 261 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactc 355 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 250 bits (126), Expect = 4e-63 Identities = 213/242 (88%) Strand = Plus / Minus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| || Sbjct: 28286517 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 28286458 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 28286457 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28286398 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28286397 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28286338 Query: 192 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 251 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 28286337 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28286278 Query: 252 at 253 || Sbjct: 28286277 at 28286276 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 386 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 387 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 446 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 447 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 506 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 507 caggatgcgatgaagactggttccttctacggttaga 543 || || |||||||||||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 126 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 185 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 186 ttcc 189 |||| Sbjct: 28290047 ttcc 28290044 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 8 ccccaccaacgtgcagctccctggcatgtacaac 41 ||||||||||||||||||||| || ||||||||| Sbjct: 28290198 ccccaccaacgtgcagctcccagggatgtacaac 28290165 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 261 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 310 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 gagaacattggcaagaggctggtgaactc 355 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 232 bits (117), Expect = 1e-57 Identities = 255/301 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 473 ccccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccat 532 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 533 catcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat 592 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||||||||||||||||||||||||| | || ||||| |||| ||||||| |||||||| Sbjct: 593 ggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatctt 652 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 | | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || || Sbjct: 653 caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggcca 712 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtg 307 |||||||||||| |||||||| ||| | || |||| |||||||| |||||| | ||||| Sbjct: 713 atccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtg 772 Query: 308 g 308 | Sbjct: 773 g 773 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 336 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 395 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 396 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 455 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 456 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 515 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 516 atgaagactggttccttctacggttag 542 || |||||||| |||||||| |||||| Sbjct: 981 atcaagactggatccttctatggttag 1007
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 232 bits (117), Expect = 1e-57 Identities = 255/301 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 667 ccccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccat 726 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 727 catcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat 786 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||||||||||||||||||||||||| | || ||||| |||| ||||||| |||||||| Sbjct: 787 ggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatctt 846 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 | | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || || Sbjct: 847 caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggcca 906 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtg 307 |||||||||||| |||||||| ||| | || |||| |||||||| |||||| | ||||| Sbjct: 907 atccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtg 966 Query: 308 g 308 | Sbjct: 967 g 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 336 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 395 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 396 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 455 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 456 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 515 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 516 atgaagactggttccttcta 535 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 224 bits (113), Expect = 2e-55 Identities = 254/301 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||| Sbjct: 774 ccccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccat 833 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 834 catcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat 893 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||||||||||||||||||||||||| | || ||||| |||| ||||||| |||||||| Sbjct: 894 ggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatctt 953 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 | | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || || Sbjct: 954 caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggcca 1013 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtg 307 |||||||||||| |||||||| ||| | || |||| |||||||| |||||| | ||||| Sbjct: 1014 atccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtg 1073 Query: 308 g 308 | Sbjct: 1074 g 1074 Score = 103 bits (52), Expect = 6e-19 Identities = 166/204 (81%) Strand = Plus / Plus Query: 339 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 398 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 399 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 458 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 459 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 518 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 519 aagactggttccttctacggttag 542 |||||||| |||||||| |||||| Sbjct: 1285 aagactggatccttctatggttag 1308
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 224 bits (113), Expect = 2e-55 Identities = 254/301 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||| Sbjct: 637 ccccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccat 696 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 697 catcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat 756 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||||||||||||||||||||||||| | || ||||| |||| ||||||| |||||||| Sbjct: 757 ggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatctt 816 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 | | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || || Sbjct: 817 caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggcca 876 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtg 307 |||||||||||| |||||||| ||| | || |||| |||||||| |||||| | ||||| Sbjct: 877 atccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtg 936 Query: 308 g 308 | Sbjct: 937 g 937 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 339 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 398 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 399 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 458 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 459 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 518 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 519 aagactggttccttcta 535 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 212 bits (107), Expect = 9e-52 Identities = 245/291 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 393 ccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccat 452 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || || Sbjct: 453 catcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcat 512 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 513 ggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatctt 572 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 || |||||| ||| || ||| |||||| || | |||||||||||||| || || Sbjct: 573 ccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggcca 632 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 298 ||||| ||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 633 gtccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 495 ggtgatgctaaccaggatgcgatgaagactggttccttct 534 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 204 bits (103), Expect = 2e-49 Identities = 244/291 (83%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 788 ccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccat 847 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || || Sbjct: 848 catcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcat 907 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 908 ggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatctt 967 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 || |||||| ||| || ||| |||||| || | |||||||||||||| || || Sbjct: 968 ccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggcca 1027 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 298 ||||| || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 1028 gtccatcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 495 ggtgatgctaaccaggatgcgatgaagactggttccttct 534 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 958 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 958 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 987 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 869 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 929 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 192 bits (97), Expect = 9e-46 Identities = 220/261 (84%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||| || || |||||||| |||||||||||| | |||||| ||||||| ||||| Sbjct: 904 ccccaccaatgtccaactccctggtatgtacaacaagcaagagaacgcccgtgttcccat 963 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 ||||||| |||||||| ||||| || | |||||||| || ||||||||||||||||| Sbjct: 964 tatcgtcactggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgtat 1023 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 1024 ggagaagttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatctt 1083 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 | |||||||||||| ||| || || |||||| |||||||||||||||| || || Sbjct: 1084 caggaccgacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggcca 1143 Query: 248 atccattgactttttcggtgc 268 ||| ||||| || |||||||| Sbjct: 1144 atctattgatttcttcggtgc 1164
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 784 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 843 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 844 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 903 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 904 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 14330 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 14271 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 14270 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 14211 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14210 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 872 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 932 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 992 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 869 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 929 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 872 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 932 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 992 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 987 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 192 bits (97), Expect = 9e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 2953 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 3012 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 3013 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 3072 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3073 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 184 bits (93), Expect = 2e-43 Identities = 156/177 (88%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| ||||| || || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 861 accaacgtccagcttccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 920 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 921 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 980 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 981 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | ||||| ||| Sbjct: 862 cagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcattgtcactggt 921 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||| |||||||| | ||||||||||| |||||||||||||||||||| || |||||| Sbjct: 922 aacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaaaaattctac 981 Query: 141 tgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaat 200 |||||||| ||| | || |||||||| ||||||||||||||||| ||| ||| |||||| Sbjct: 982 tgggctcctaccagggaagaccgtattggtgtctgcaagggtattttcaggactgacaat 1041 Query: 201 gt 202 || Sbjct: 1042 gt 1043 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 465 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 514 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 178 bits (90), Expect = 1e-41 Identities = 165/190 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 664 ccccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtccccat 723 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | ||||||| |||||||||||||| || || || |||||||| |||||||| |||||||| Sbjct: 724 catcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtat 783 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||| || |||||||| || || | ||||||||||||||||| ||||| ||||| || Sbjct: 784 ggagaaattttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggtatttt 843 Query: 188 ccagaccgac 197 | ||||||| Sbjct: 844 caggaccgac 853 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 226 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 285 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 286 acga 289 |||| Sbjct: 942 acga 945
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 176 bits (89), Expect = 5e-41 Identities = 236/285 (82%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 334 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 393 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 |||||||||||| ||||| ||||| ||||| ||||| || || || || || || || || Sbjct: 394 cgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgcat 453 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 454 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 513 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 || |||||| ||| |||||| |||||| || |||||||| ||||||| || || Sbjct: 514 ccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggcca 573 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacga 292 ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 574 gtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 176 bits (89), Expect = 5e-41 Identities = 236/285 (82%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 342 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 401 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 |||||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 402 cgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 461 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||| Sbjct: 462 ggacaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatctt 521 Query: 188 ccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggaca 247 || |||||| ||| |||||| |||||| || |||||||| ||||||| || || Sbjct: 522 ccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggcca 581 Query: 248 atccattgactttttcggtgctctgcgtgctcgggtgtacgacga 292 ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 582 gtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 626
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 172 bits (87), Expect = 8e-40 Identities = 144/163 (88%) Strand = Plus / Plus Query: 15 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 74 ||||| ||||| || || ||||||||||||||||||||||||||||| || ||| | ||| Sbjct: 872 aacgtccagcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtc 931 Query: 75 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 134 ||||||||||||||||| || | ||||||||||| |||||||| ||||||||||||||| Sbjct: 932 accggtaacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaag 991 Query: 135 ttctactgggctcccacccgtgacgaccgtatcggtgtctgca 177 |||||||||||||||||||| || || ||||| || ||||||| Sbjct: 992 ttctactgggctcccacccgcgaagatcgtattggagtctgca 1034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 495 ggtgatgctaac 506 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.50 Identities = 64/78 (82%) Strand = Plus / Plus Query: 231 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 290 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 291 gatgaggtgcgcaagtgg 308 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 348 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 407 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 408 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 467 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 468 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 527 Query: 188 cc 189 || Sbjct: 528 cc 529
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 354 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 413 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 414 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 473 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 474 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 533 Query: 188 cc 189 || Sbjct: 534 cc 535
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 170 bits (86), Expect = 3e-39 Identities = 158/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 352 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 411 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct: 412 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat 471 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 472 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 531 Query: 188 cc 189 || Sbjct: 532 cc 533
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| || |||||||||||||| |||||||| ||||| || || Sbjct: 849 ccccaccaacgttcagctccccggtatgtacaacaaggaagagaaccctcgtgttccgat 908 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | | |||||||||||||||||||||||||| ||||| || || |||||||| |||||||| Sbjct: 909 cattgtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtat 968 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||||||||| |||||||| |||||| | || || | |||||||| |||| ||||| || Sbjct: 969 ggagaagttttactgggcacccaccagggaagataggatcggtgtttgcacaggtatttt 1028 Query: 188 ccagaccgacaatgt 202 | |||||||||||| Sbjct: 1029 caggaccgacaatgt 1043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 231 gacaccttcccaggacaatccattgactttttcggtgctctg 272 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 165 bits (83), Expect = 2e-37 Identities = 156/182 (85%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||||||||||||| || | |||||||| Sbjct: 788 ccccaccaacgtgcagctcccggggatgtacaacaaggaggacaannnnngcgtgcccat 847 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || || Sbjct: 848 catcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcat 907 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 908 ggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatctt 967 Query: 188 cc 189 || Sbjct: 968 cc 969 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 375 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 434 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 435 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 494 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 495 ggtgatgctaaccaggatgcgatgaagactggttccttct 534 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 163 bits (82), Expect = 8e-37 Identities = 163/190 (85%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 663 ccccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtccccat 722 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 ||||||| |||||||||||||| || || || |||||||| |||||||| |||||||| Sbjct: 723 tatcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtat 782 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||| || |||||||| || || | ||||||||| ||||||| ||||| ||||| || Sbjct: 783 ggagaaattttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtatttt 842 Query: 188 ccagaccgac 197 | ||||||| Sbjct: 843 caggaccgac 852 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 226 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 285 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 286 acga 289 |||| Sbjct: 941 acga 944
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 352 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 411 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 412 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 471 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 472 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 531 Query: 188 cc 189 || Sbjct: 532 cc 533
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 348 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 407 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 408 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 467 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 468 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 527 Query: 188 cc 189 || Sbjct: 528 cc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 348 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 407 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 408 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 467 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 468 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 527 Query: 188 cc 189 || Sbjct: 528 cc 529
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 350 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 409 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 410 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 469 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 470 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 529 Query: 188 cc 189 || Sbjct: 530 cc 531
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 163 bits (82), Expect = 8e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||| Sbjct: 354 ccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccat 413 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || || Sbjct: 414 catcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat 473 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 ||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 474 ggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatctt 533 Query: 188 cc 189 || Sbjct: 534 cc 535
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 |||||| || |||||||| ||||| |||||||||||||| || ||| ||||||||||||| Sbjct: 854 ccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtgcccat 913 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | | ||||| |||||||||||||| || || || |||||||| ||||||||||||||||| Sbjct: 914 cattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtat 973 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatctt 187 |||||||||||||||||| || || | || ||||| || ||||| |||||||| || || Sbjct: 974 ggagaagttctactgggcaccaacaagggaagaccgcattggtgtttgcaagggaatttt 1033 Query: 188 ccagaccga 196 || |||||| Sbjct: 1034 ccggaccga 1042
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 24 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 83 |||||||| |||||||||||| |||| || ||||||| |||||| | || || |||||| Sbjct: 2662 ctccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaac 2721 Query: 84 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 143 |||||||| || | |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 2722 gatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactgg 2781 Query: 144 gctcccacccgtgacgaccgtatcggtgtctg 175 |||||||||||||| |||||||| |||||||| Sbjct: 2782 gctcccacccgtgaggaccgtattggtgtctg 2813
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 24 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 83 |||||||| |||||||||||| |||| || ||||||| |||||| | || || |||||| Sbjct: 1034 ctccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaac 1093 Query: 84 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 143 |||||||| || | |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1094 gatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactgg 1153 Query: 144 gctcccacccgtgacgaccgtatcggtgtctg 175 |||||||||||||| |||||||| |||||||| Sbjct: 1154 gctcccacccgtgaggaccgtattggtgtctg 1185 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 226 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 285 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 286 acgacgatga 295 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 18 gtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 77 |||||||| ||||| |||||||||||||| |||||| |||||||||||||| | |||||| Sbjct: 868 gtgcagcttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtcacc 927 Query: 78 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 137 ||||| |||||||| ||||| || |||||||| || |||||||| ||||||||||||||| Sbjct: 928 ggtaatgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaagttc 987 Query: 138 tactgggc 145 |||||||| Sbjct: 988 tactgggc 995
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 147 bits (74), Expect = 5e-32 Identities = 146/170 (85%) Strand = Plus / Plus Query: 8 ccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccat 67 ||||||||| || || |||||||| |||||||||||||| || || | ||||||||||| Sbjct: 287 ccccaccaatgtccaactccctggtatgtacaacaaggaagacaatgctcgtgtgcccat 346 Query: 68 cgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat 127 | | ||||||||||| |||||||| || || || |||||||| ||||||||||||||||| Sbjct: 347 cattgtcaccggtaatgatttctcaacactttatgctcctctcatccgtgatggtcgtat 406 Query: 128 ggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 177 ||||||||||||||||||||| || | || || ||||| |||||||||| Sbjct: 407 ggagaagttctactgggctcctactagagaagatcgtattggtgtctgca 456 Score = 48.1 bits (24), Expect = 0.032 Identities = 75/92 (81%) Strand = Plus / Plus Query: 219 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 278 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 279 cgggtgtacgacgatgaggtgcgcaagtgggt 310 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 143 bits (72), Expect = 7e-31 Identities = 162/192 (84%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||| || ||||||||||| |||||||||||| |||| || | ||||| |||||| || Sbjct: 57 accaatgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatc 116 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 || || |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 117 gttactggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggag 176 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 || ||||||||||| ||||| ||||| |||||||| ||||| |||| ||||||||| | Sbjct: 177 aaattctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcagg 236 Query: 192 accgacaatgtc 203 || ||||||||| Sbjct: 237 actgacaatgtc 248
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 ||||| |||||||||||||||||||| |||||||| ||||| |||||| | ||||| ||| Sbjct: 862 cagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcattgtcactggt 921 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||| ||||| || | || || ||||| ||||||||||| ||||||||||| |||||| Sbjct: 922 aacgacttctcaacattgtatgcccctcttatccgtgatggccgtatggagaaattctac 981 Query: 141 tgggctcccacccgtgacgaccgtatcggtgtctgcaa 178 ||||| |||||| | || |||||||| ||||||||||| Sbjct: 982 tgggcacccaccagggaggaccgtattggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 7.8 Identities = 68/84 (80%) Strand = Plus / Plus Query: 422 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 481 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 482 ccaggcagctctgggtgatgctaa 505 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 137 bits (69), Expect = 4e-29 Identities = 150/177 (84%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||| || |||||||| || |||||||||||||| ||||| || ||||| || ||| || Sbjct: 696 accaatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatc 755 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||||| Sbjct: 756 gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 815 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 || ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 816 aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 137 bits (69), Expect = 4e-29 Identities = 150/177 (84%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||| || |||||||| || |||||||||||||| ||||| || ||||| || ||| || Sbjct: 869 accaatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatc 928 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||||| Sbjct: 929 gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 988 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 188 || ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 989 aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 24 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 83 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||| || ||| Sbjct: 295 ctccctggaatgtacgacaaggaggagaacccccgtgtgcccatcatcgtcacaggaaac 354 Query: 84 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 143 |||||||| | || || ||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 355 gatttctcagcactatatgctccccttatccgcgatggtcgtatggaaaagttctactgg 414 Query: 144 gctcc 148 ||||| Sbjct: 415 gctcc 419
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 35 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 94 ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| || Sbjct: 1 gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60 Query: 95 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 154 | || ||||| || ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 61 cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120 Query: 155 tgacgaccgtatcggtgtctgca 177 ||||| ||||| |||||||||| Sbjct: 121 cgacgatcgtattggtgtctgca 143
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 117 bits (59), Expect = 4e-23 Identities = 224/279 (80%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 |||||||| || |||||||||||| | |||||| || | || ||||| | ||||| ||| Sbjct: 184 cagctccccggtatgtacaacaagcaagagaacgccagggtccccattattgtcactggt 243 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||| ||||| || | || |||||||| ||||||||||||||||||||||||||||| Sbjct: 244 aacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttctat 303 Query: 141 tgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaat 200 ||||| || || | || || | || ||||| ||||||||||| ||| ||||||||| Sbjct: 304 tgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggaccgacaac 363 Query: 201 gtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttt 260 || ||| || |||| || ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 364 gtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatctattgacttc 423 Query: 261 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 299 || ||||||||| | || || || ||||| ||||||||| Sbjct: 424 tttggtgctctgagggcacgagtatacgatgatgaggtg 462
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 105 bits (53), Expect = 2e-19 Identities = 227/285 (79%) Strand = Plus / Plus Query: 15 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 74 ||||| |||||||| || |||||||||||| | |||||| || | || ||||| | ||| Sbjct: 822 aacgtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtc 881 Query: 75 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 134 || |||||||| ||||| || | || |||||||| |||||||||||||||||||||||| Sbjct: 882 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 941 Query: 135 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 194 ||||| ||||| || || | || || | || ||||| ||||||||||| ||| |||| Sbjct: 942 ttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggacc 1001 Query: 195 gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 254 ||||| || ||| || | || | ||||| ||||| |||||||| |||||||| ||| Sbjct: 1002 gacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctatt 1061 Query: 255 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 299 ||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 1062 gacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||||||||| || ||| ||||||| ||| | ||| |||||||| ||||| ||| Sbjct: 1682 accaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtc 1741 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || || ||||| || || |||||||| || || |||||| Sbjct: 1742 tgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggag 1801 Query: 132 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 191 |||| ||||||| ||||||||||| ||||| ||||| ||||||| ||| ||||||||| Sbjct: 1802 aagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 435 gagcaggacaatgtcaagcgtgtgcagct 463 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 103 bits (52), Expect = 6e-19 Identities = 139/166 (83%), Gaps = 4/166 (2%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 853 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 912 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||| |||||||||||||| || | |||| |||||| |||| |||||| ||||||||| Sbjct: 913 tgcactggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggag 972 Query: 132 aagttct--actgggctcccacccgtgacgaccgtatcggtgtctg 175 ||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 973 aagttcttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 |||||||| || |||||||||||| | |||||| || | || ||||| | ||||| ||| Sbjct: 839 cagctccccggtatgtacaacaagcaagagaacgccagggtacccattattgtcactggt 898 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||| ||||| || | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 899 aacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttctac 958 Query: 141 tgggc 145 ||||| Sbjct: 959 tgggc 963
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 89.7 bits (45), Expect = 9e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 |||||||| || |||||||||||| | ||||| || | || || || ||||||| ||| Sbjct: 98 cagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtcactggt 157 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||||||||| || | || ||||| || |||||||||||||||||||||||||||||| Sbjct: 158 aacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaagttctac 217 Query: 141 tgggc 145 ||||| Sbjct: 218 tgggc 222 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 219 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 268 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 89.7 bits (45), Expect = 9e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 80 |||||||| || |||||||||||| | ||||| || | || || || ||||||| ||| Sbjct: 858 cagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtcactggt 917 Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||||||||| || | || ||||| || |||||||||||||||||||||||||||||| Sbjct: 918 aacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaagttctac 977 Query: 141 tgggc 145 ||||| Sbjct: 978 tgggc 982
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 402 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 461 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 462 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 517 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 12 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 71 ||||| |||||||| || |||||||| |||||||| || || ||| | || |||||| | Sbjct: 864 accaatgtgcagctaccaggcatgtataacaaggaagaaaatcccagagttcccatcata 923 Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 || || |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| Sbjct: 924 gtaactggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggat 983 Query: 132 aagttctactgggctcccacccgtgacgaccgtat 166 || |||||||||||||| || ||||| || ||||| Sbjct: 984 aaattctactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 228 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 287 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 288 gacgatgaggtgcgcaagtggg 309 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| |||||||||||||| || | || || ||||| ||||||||||||||||||||| Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985 Query: 132 aagttctactgggc 145 || ||||||||||| Sbjct: 986 aaattctactgggc 999 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 219 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 272 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 231 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 290 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 291 ga 292 || Sbjct: 2722 ga 2723
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 231 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 290 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 291 ga 292 || Sbjct: 1032 ga 1033
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 27 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 86 ||||| |||||||||||||| || || || ||||| || || || || || || || ||| Sbjct: 562 cctggaatgtacaacaaggaagaaaatcctcgtgttccaattgttgtgacaggaaatgat 621 Query: 87 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 143 ||||| || | || ||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 622 ttctcaactttgtatgctccattgattcgtgatgggcgtatggagaagttctactgg 678
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 33 atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 92 ||||||||||| || ||||| |||| || || ||| ||||||| || || || ||||| Sbjct: 7019 atgtacaacaaagaagagaatgcccgcgtccctatcatcgtcactggcaatgacttctct 6960 Query: 93 acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 152 ||| | || |||||| | || |||||||| |||||||| || ||||||||||| || || Sbjct: 6959 acgttgtatgctcctttaattcgtgatggacgtatggaaaaattctactgggcacctact 6900 Query: 153 cgtgacga 160 |||||||| Sbjct: 6899 cgtgacga 6892
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 933 aagttctactgg 944
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 72 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 131 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 132 aagttctactgg 143 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 81 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 140 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 141 tgg 143 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 102 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 145 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 102 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 145 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 480 agccaggcagctctgggtgatg 501 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 caagatcgtcgacaccttccc 241 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 2.0 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 72 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 130 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 131 gaagttctactgg 143 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ggtgtctgcaagggtatcttccag 191 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 agcgtgtgcagcttgctgac 470 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agtgacgagtctgtcgtcaa 223 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 caggagcaggacaatgtcaa 451 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgtgacgaccgtatcggtgt 172 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 caggagcaggacaatgtcaa 451 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tgagccaggcagctctgggtgatg 501 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence Length = 262 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 21 cagctccctggcatgtacaacaaggaggagaa 52 ||||||||||| ||||||||||| ||||||| Sbjct: 157 cagctccctggtatgtacaacaaacaggagaa 188 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,156,176 Number of Sequences: 3902068 Number of extensions: 3156176 Number of successful extensions: 51978 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51661 Number of HSP's gapped (non-prelim): 277 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
