ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal12k06 |
|---|---|
| Clone Library Name | barley_pub |
>EF1G3_ORYSA (Q5Z627) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma| 3) Length = 416 Score = 328 bits (840), Expect = 1e-89 Identities = 159/230 (69%), Positives = 173/230 (75%), Gaps = 3/230 (1%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGHSVTLADIVMTCNLY+GF RIL K+FTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE Sbjct: 151 LVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 210 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SKMVL 359 VP VQ SKM+L Sbjct: 211 SVPPVQKKAAPPKESKAKEAKKEAPKEAPKPKVEASEEEEAPKPKPKNPLDLLPPSKMIL 270 Query: 360 DDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQR 539 D+WKRLYSNTK+NF ++A+KGFW+MYDPEGYSLWFCDYKY +ENTVS+VT+NKVGGFLQR Sbjct: 271 DEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQR 330 Query: 540 MDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 MDLCRKYAFGKMLVIGS PFKVKGLWLFRGQDIP+FVM+EVYDMELYEW Sbjct: 331 MDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEW 380
>EF1G1_ORYSA (Q9ZRI7) Elongation factor 1-gamma 1 (EF-1-gamma 1) (eEF-1B gamma| 1) Length = 418 Score = 322 bits (825), Expect = 7e-88 Identities = 157/232 (67%), Positives = 172/232 (74%), Gaps = 5/232 (2%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGHSVTLADIVMTCNLY GFARI+TK FTSEFPHVERYFWTMVNQPNFKKV+GD KQA+ Sbjct: 151 LVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDVKQAD 210 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXSKM 353 VP VQ SKM Sbjct: 211 SVPQVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPKPKNPLDLLPPSKM 270 Query: 354 VLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFL 533 +LD+WKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFCDYKY +ENTVS+VT+NKVGGFL Sbjct: 271 ILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFL 330 Query: 534 QRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 QRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG +IP+FVM+EVYDMELYEW Sbjct: 331 QRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEW 382
>EF1G2_ARATH (Q9FVT2) Probable elongation factor 1-gamma 2 (EF-1-gamma 2)| (eEF-1B gamma 2) Length = 413 Score = 301 bits (771), Expect = 1e-81 Identities = 146/227 (64%), Positives = 160/227 (70%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGHSVTLADIV CNL GFA ++TK FTS FPHVERYFWTMVNQP FKKV+GD KQ E Sbjct: 151 LVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTE 210 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMVLDDW 368 VP V S MVLDDW Sbjct: 211 AVPPVPTKKAPQPAKPKEEPKKAAPVAEAPKPAEEEEAPKPKAKNPLDLLPPSPMVLDDW 270 Query: 369 KRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQRMDL 548 KRLYSNTKSNF +VA+KGFW+MYDPEGYSLWFCDYKY +EN VS+VTLNKVGGFLQRMDL Sbjct: 271 KRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDL 330 Query: 549 CRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 RKY+FGKML+ GSE PFKVKGLWLFRG +IP+F+M+EVYDMELYEW Sbjct: 331 ARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEW 377
>EF1G_PRUAV (Q9FUM1) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 422 Score = 298 bits (764), Expect = 8e-81 Identities = 145/236 (61%), Positives = 162/236 (68%), Gaps = 9/236 (3%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGH VTLADI++TCNL+ GF +++ K+FTSEFPHVERYFWT+VNQP FKKV+GD KQ E Sbjct: 151 LVGHFVTLADIIVTCNLFFGFTKLMIKSFTSEFPHVERYFWTLVNQPKFKKVLGDVKQTE 210 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXX 341 VP V Sbjct: 211 SVPPVPSAKKPSQPKETKSKAKEEPKKEAKKEPAKPKAEAAEEVEEAPKPKPKNPLDLLP 270 Query: 342 XSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKV 521 S MVLDDWKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFC+YKY +ENTVS+VTLNKV Sbjct: 271 PSNMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKV 330 Query: 522 GGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 GGFLQRMDL RKYAFGKMLVIGSE PFKVKGLWLFRGQ+IP FVM E YDMELY W Sbjct: 331 GGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNW 386
>EF1G1_ARATH (O04487) Probable elongation factor 1-gamma 1 (EF-1-gamma 1)| (eEF-1B gamma 1) Length = 414 Score = 298 bits (763), Expect = 1e-80 Identities = 143/228 (62%), Positives = 161/228 (70%), Gaps = 1/228 (0%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGHS+TLADI+ CNL GFA ++TK FTSEFPHVERYFWT+VNQPNF KV+GD KQ E Sbjct: 151 LVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVKQTE 210 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SKMVLDD 365 VP + S MVLDD Sbjct: 211 AVPPIASKKAAQPAKPKEEPKKKEAPVAEAPKLAEEEEAPKPKAKNPLDLLPPSPMVLDD 270 Query: 366 WKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQRMD 545 WKRLYSNTKSNF +VA+KGFW+MYDPEGYSLWFCDYKY +EN VS+VTLNKVGGFLQRMD Sbjct: 271 WKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMD 330 Query: 546 LCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 L RKY+FGKML+ GSE PFKVKGLWLFRG +IP+F+M+EVYDMELYEW Sbjct: 331 LARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEW 378
>EF1G2_ORYSA (Q6YW46) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma| 2) Length = 418 Score = 226 bits (576), Expect = 5e-59 Identities = 99/115 (86%), Positives = 111/115 (96%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 SKM+LD+WKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFCDYKY +ENTVS+VT+NKVG Sbjct: 268 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVG 327 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 GFLQRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG +IP+FVM+EVYDMELYEW Sbjct: 328 GFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEW 382 Score = 125 bits (315), Expect = 9e-29 Identities = 59/66 (89%), Positives = 62/66 (93%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVGHSVTLADIVMTCNLY GFARI+TK+FTSEFPHVERYFWTMVNQPNFKKV+GD KQAE Sbjct: 151 LVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAE 210 Query: 189 VVPSVQ 206 VP VQ Sbjct: 211 SVPPVQ 216
>EF1G_TRYCR (P34715) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 411 Score = 102 bits (254), Expect = 1e-21 Identities = 50/115 (43%), Positives = 74/115 (64%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD +KR YSNT + VA F++ YD GY+ ++C YKY E+N + ++T N + Sbjct: 265 SPFVLDAFKREYSNTDTR--TVAAPYFFQHYDAAGYTTFWCRYKYNEDNKMQFMTANLIR 322 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 689 G+ QRM+ RKYAFG L+IG E + LW+FRG+ +P ++ +V D EL++W Sbjct: 323 GWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDW 376
>EF1G_CAEEL (P54412) Probable elongation factor 1-gamma (EF-1-gamma) (eEF-1B| gamma) Length = 398 Score = 99.0 bits (245), Expect = 1e-20 Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 8/235 (3%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG ++LAD+ + +L F +L +V R+F T+VNQP K+V+G+ A Sbjct: 130 LVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLAS 189 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------S 347 V Sbjct: 190 SVAQFNQAKFTELSAKVAKSAPKAEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMPKG 249 Query: 348 KMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGG 527 VLD++KR YSN + A+ FWE +D + +S+W C+YKY E+ T+++++ N + G Sbjct: 250 TFVLDNFKRSYSNEDTATK--AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLING 307 Query: 528 FLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIP-EFVMNEVYDMELYEW 689 QR++ +K AF M++ G++ + G+W+++G + E + D E Y W Sbjct: 308 MYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTW 362
>EF1G1_YEAST (P29547) Elongation factor 1-gamma 1 (EF-1-gamma 1) (Translation| elongation factor 1B gamma 1) (Eukaryotic elongation factor 1Bgamma 1) (eEF1Bgamma 1) (Calcium and membrane-binding protein 1) (Calcium phospholipid-binding protein) (CPBP) Length = 415 Score = 95.5 bits (236), Expect = 1e-19 Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 1/228 (0%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 L +++LAD+V F + + ++ P + R+F T+ P K DFK A+ Sbjct: 153 LATENISLADLVAASIFTRYFESLFGTEWRAQHPAIVRWFNTVRASPFLKDEYKDFKFAD 212 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMVLDDW 368 P S VLDDW Sbjct: 213 K-PLSPPQKKKEKKAPAAAPAASKKKEEAKPAATETETSSKKPKHPLELLGKSTFVLDDW 271 Query: 369 KRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQRMDL 548 KR YSN + VA+ FWE Y+PE YSLW YKY +E T+++++ N VGGF R+ Sbjct: 272 KRKYSNEDTR--PVALPWFWEHYNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSA 329 Query: 549 CRKYAFGKMLVIGSEAPFKVKGLWLFRGQD-IPEFVMNEVYDMELYEW 689 KY FG ++V G + G + RGQD +P F + D E Y++ Sbjct: 330 STKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWESYDY 375
>EF1GA_XENLA (P26642) Elongation factor 1-gamma-A (EF-1-gamma-A) (eEF-1B| gamma-A) (p47) Length = 436 Score = 94.0 bits (232), Expect = 4e-19 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S ++D++KR YSN + VA+ FWE +D EG+S+W+ +YK+ EE T ++++ N + Sbjct: 285 SSFIMDEFKRKYSNEDTL--TVALPYFWEHFDKEGWSIWYAEYKFPEELTQAFMSCNLIT 342 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK F +++ G+ + G+W+FRGQD+ F ++E + D E Y W Sbjct: 343 GMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDL-AFTLSEDWQIDYESYNW 398 Score = 56.2 bits (134), Expect = 9e-08 Identities = 26/57 (45%), Positives = 38/57 (66%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFK 179 LVG +TLADI +TC+L + ++L +F F +V R+F T VNQP F+ V+G+ K Sbjct: 152 LVGERITLADITVTCSLLWLYKQVLEPSFRQPFGNVTRWFVTCVNQPEFRAVLGEVK 208
>EF1G_CARAU (Q90YC0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 93.6 bits (231), Expect = 5e-19 Identities = 44/117 (37%), Positives = 75/117 (64%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S V+D++KR YSN + VA+ FW+ +D EG+S+W+ +Y++ EE T+S+++ N + Sbjct: 291 SSFVMDEFKRKYSNEDTL--TVALPYFWDHFDREGFSIWYAEYRFPEELTMSFMSCNLIT 348 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++E + D E Y W Sbjct: 349 GMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTW 404 Score = 57.8 bits (138), Expect = 3e-08 Identities = 27/60 (45%), Positives = 38/60 (63%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG V+LADI + C+L + ++L F +P+V R+F T VNQP FK V+G+ K E Sbjct: 152 LVGERVSLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFLTCVNQPQFKAVLGEVKLCE 211
>EF1G2_YEAST (P36008) Elongation factor 1-gamma 2 (EF-1-gamma 2) (Translation| elongation factor 1B gamma 2) (Eukaryotic elongation factor 1Bgamma 2) (eEF1Bgamma 2) Length = 412 Score = 92.8 bits (229), Expect = 9e-19 Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 1/224 (0%) Frame = +3 Query: 21 SVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAEVVPS 200 +++L D+ + G A IL + ++ PH+ R+F T+ P K + K AE + Sbjct: 154 NISLGDLHAAGSWAFGLATILGPEWRAKHPHLMRWFNTVAASPIVKTPFAEVKLAEKALT 213 Query: 201 VQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMVLDDWKRLY 380 S VLDDWKR Y Sbjct: 214 Y-TPPKKQKAEKPKAEKSKAEKKKDEAKPADDAAPAKKPKHPLEALGKSTFVLDDWKRKY 272 Query: 381 SNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKY 560 SN + VA+ FWE Y+PE YS+W YKY +E T+++++ N VGGF R+ KY Sbjct: 273 SNDDTR--PVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKY 330 Query: 561 AFGKMLVIGSEAPFKVKGLWLFRGQDI-PEFVMNEVYDMELYEW 689 FG ++V G + G + RGQD P F + D E YE+ Sbjct: 331 MFGCLVVYGENNNNGIVGAVMVRGQDFAPAF--DVAPDWESYEY 372
>EF1G_SCHPO (P40921) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 409 Score = 92.4 bits (228), Expect = 1e-18 Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 2/216 (0%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG +TLADI TC L G +LTK++ +++ H+ RY+ T+ +Q + K + Sbjct: 150 LVGSRLTLADIFFTCFLKFGATYVLTKSYLAKYTHIYRYYQTIYHQAKLDAITEPLKFID 209 Query: 189 VVPSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMVLDDW 368 P ++++ Sbjct: 210 Q-PLPIIKAENKEAAPAKKAEKKKDEKKKNAPKPQAERPAKPPKHPLASAPNGSFDIEEY 268 Query: 369 KRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEE-NTVSYVTLNKVGGFLQRMD 545 KR+YSN + A+ F+E +DPE YS+W DY Y E+ ++T N +GGF QR++ Sbjct: 269 KRVYSNQDTR--SGALPWFFEHFDPENYSVWKVDYSYPEDLKQPVFMTNNLIGGFFQRLE 326 Query: 546 LCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD-IPEF 650 RKY FG +VIG + G ++ +G D +P F Sbjct: 327 ASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAF 362
>EF1G_BRARE (Q6PE25) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 92.4 bits (228), Expect = 1e-18 Identities = 43/117 (36%), Positives = 75/117 (64%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S V+D++KR YSN + VA+ FW+ +D EG+S+W+ +Y++ EE T+++++ N + Sbjct: 291 SSFVMDEFKRKYSNEDTM--TVALPYFWDHFDREGFSIWYAEYRFPEELTMAFMSCNLIT 348 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQD+ F +++ + D E Y W Sbjct: 349 GMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDL-AFPLSDDWQIDYESYTW 404 Score = 57.0 bits (136), Expect = 5e-08 Identities = 26/60 (43%), Positives = 38/60 (63%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG ++LADI + C+L + ++L F +P+V R+F T VNQP FK V+G+ K E Sbjct: 152 LVGERISLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFVTCVNQPQFKTVLGEVKLCE 211
>EF1G_RAT (Q68FR6) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 92.0 bits (227), Expect = 1e-18 Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T ++++ N + Sbjct: 285 STFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLIT 342 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQD+ F ++ + D E Y W Sbjct: 343 GMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDL-AFPLSPDWQVDYESYTW 398 Score = 57.4 bits (137), Expect = 4e-08 Identities = 25/60 (41%), Positives = 37/60 (61%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG VTLADI + C L + ++L +F FP+ R+F T +NQP F+ ++G+ K E Sbjct: 151 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCE 210
>EF1GB_XENLA (Q91375) Elongation factor 1-gamma-B (EF-1-gamma-B) (eEF-1B| gamma-B) (p47) Length = 437 Score = 91.3 bits (225), Expect = 3e-18 Identities = 43/117 (36%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S ++D++KR YSN + VA+ FWE ++ EG+S+W+ +YK+ EE T ++++ N + Sbjct: 286 SSFIMDEFKRKYSNEDTL--TVALPYFWEHFEKEGWSIWYAEYKFPEELTQTFMSCNLIT 343 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRG D+ F ++E + D E Y W Sbjct: 344 GMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHDL-AFTLSEDWQIDYESYTW 399 Score = 55.5 bits (132), Expect = 2e-07 Identities = 25/57 (43%), Positives = 38/57 (66%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFK 179 LVG +TLADI +TC+L + ++L +F + +V R+F T VNQP F+ V+G+ K Sbjct: 153 LVGERITLADITLTCSLLWLYKQVLEPSFRQPYGNVTRWFVTCVNQPEFRAVLGEVK 209
>EF1G_RABIT (P29694) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 90.9 bits (224), Expect = 3e-18 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T ++++ N + Sbjct: 285 STFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLIT 342 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D E Y W Sbjct: 343 GMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQEL-AFPLSPDWQVDYESYTW 398 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/60 (43%), Positives = 37/60 (61%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG VTLADI + C L + ++L +F FP+ R+F T +NQP F+ V+G+ K E Sbjct: 151 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCE 210
>EF1G_ARTSA (P12261) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 429 Score = 90.9 bits (224), Expect = 3e-18 Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%) Frame = +3 Query: 357 LDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQ 536 +DD+KR YSN N ++ FWE +D E YS+W+ +YKYQ+E Y++ N + G Q Sbjct: 284 MDDFKRFYSN---NEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQ 340 Query: 537 RMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIP-EFVMNEVYDMELYEW 689 R++ RK AF + V G + + G+W++RGQD+ + + D E Y+W Sbjct: 341 RIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDW 392 Score = 61.6 bits (148), Expect = 2e-09 Identities = 28/60 (46%), Positives = 38/60 (63%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG +TLADIV+TC L H + +L + F + + R+F T++NQ K VIGDFK E Sbjct: 148 LVGERITLADIVVTCTLLHLYQHVLDEAFRKSYVNTNRWFITLINQKQVKAVIGDFKLCE 207
>EF1G_MOUSE (Q9D8N0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 90.5 bits (223), Expect = 4e-18 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T ++++ N + Sbjct: 285 STFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLIT 342 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D E Y W Sbjct: 343 GMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDYESYTW 398 Score = 57.4 bits (137), Expect = 4e-08 Identities = 25/60 (41%), Positives = 37/60 (61%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG VTLADI + C L + ++L +F FP+ R+F T +NQP F+ ++G+ K E Sbjct: 151 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCE 210
>EF1G_HUMAN (P26641) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 90.1 bits (222), Expect = 6e-18 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T ++++ N + Sbjct: 285 STFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLIT 342 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D E Y W Sbjct: 343 GMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDYESYTW 398 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/60 (43%), Positives = 37/60 (61%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG VTLADI + C L + ++L +F FP+ R+F T +NQP F+ V+G+ K E Sbjct: 151 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCE 210
>EF1G_PIG (Q29387) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| (Fragment) Length = 432 Score = 90.1 bits (222), Expect = 6e-18 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Frame = +3 Query: 345 SKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVG 524 S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T ++++ N + Sbjct: 281 STFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLIT 338 Query: 525 GFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D E Y W Sbjct: 339 GMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDYESYTW 394 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/60 (43%), Positives = 37/60 (61%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG VTLADI + C L + ++L +F FP+ R+F T +NQP F+ V+G+ K E Sbjct: 147 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCE 206
>EF1G_DROME (Q9NJH0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 431 Score = 84.0 bits (206), Expect = 4e-16 Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Frame = +3 Query: 360 DDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVSYVTLNKVGGFLQR 539 DD+KR+YSN ++ F++ +D E YS+WF +YKY EE + +++ N + G QR Sbjct: 287 DDFKRVYSNEDEA---KSIPYFFDKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQR 343 Query: 540 MDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DMELYEW 689 +D RK AF + + G + + G+W++RGQD+ F ++ + D E+Y+W Sbjct: 344 LDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDL-AFTLSPDWQIDYEVYDW 394 Score = 46.6 bits (109), Expect = 7e-05 Identities = 23/60 (38%), Positives = 36/60 (60%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 L G +TLADIV+ +L H + +L + S F +V R+F T++NQ + V+ D+K E Sbjct: 148 LAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCE 207
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 LVG S+TLAD+ + + F +L + + +V R+F T +NQP F KV+G E Sbjct: 91 LVGESITLADMAVAMAVLLPFKYVLEPSDRNVLMNVTRWFTTCINQPEFLKVLGKISLCE 150
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGD 173 L G + TLAD+ L F +L + + +V R+F T V QP F+ V+G+ Sbjct: 152 LAGDAPTLADLAAVTALLLPFRYVLDPSARRIWGNVTRWFNTCVRQPEFRAVLGE 206
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGD 173 L G + TLAD+ L F +L + + +V R+F T V QP F+ V+G+ Sbjct: 152 LAGDAPTLADLAAVTALLLPFRYVLDPSARRIWGNVTRWFNTCVRQPEFRAVLGE 206
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGD 173 L G + TLAD+ L F +L + +V R+F T V QP F+ V+G+ Sbjct: 152 LAGEAPTLADLAAVTALLLPFRYVLDPPARRIWNNVTRWFVTCVRQPEFRAVLGE 206
>YG4D_YEAST (P42936) Putative elongation factor 1 gamma homolog| Length = 225 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +3 Query: 27 TLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 188 TLAD++ GF +T+ S+ P V R+F ++ F+ FK E Sbjct: 165 TLADLISAAAFSLGFISFFDETWRSKHPEVTRWFNRVIKSRFFEGEFESFKMCE 218
>MCA3_MOUSE (Q9D1M4) Eukaryotic translation elongation factor 1 epsilon-1| (Multisynthetase complex auxiliary component p18) (Elongation factor p18) Length = 174 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +3 Query: 9 LVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKK 161 L GH++TLADI++ L H F LT ++ +V R+F + + P+ ++ Sbjct: 108 LAGHNITLADILLYYGL-HRFIVDLTVQEKEKYLNVSRWFCHIQHYPDIRQ 157
>APBE_CHLTR (O84080) Thiamine biosynthesis lipoprotein apbE precursor| Length = 316 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = +1 Query: 277 WLRHQRKRHQSLSPRIPLIYCHRARWYLMTGRGYTQTLRATSMMLLLKVSGRCMTQRVTL 456 WL H K H S + +Y H + W+L++ QTLR S ++ L + G V L Sbjct: 124 WLLHL-KSHTIPSQELQHLYKHSSGWHLISLDKTQQTLRKLSPLVQLDLCGTVKGFAVDL 182 Query: 457 CGS 465 G+ Sbjct: 183 LGT 185
>PRMA_CLOAB (P45558) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 311 Score = 30.0 bits (66), Expect = 7.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 360 DDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSL 458 ++WK+ Y TK + VK WE Y P+ Y L Sbjct: 114 NNWKKYYKPTKIGAR-IVVKPLWEEYTPKDYEL 145
>LEM3_YEAST (P42838) Alkylphosphocholine resistance protein LEM3 (Ro-sensitive| 3) Length = 414 Score = 30.0 bits (66), Expect = 7.0 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 369 KRLYSNTKSNFHDVAVKGFWEMYDPEGYS 455 K+ Y TK N+ +A +WE P+GY+ Sbjct: 270 KKRYKKTKYNYTQIAPPPYWEKMYPDGYN 298
>P320_TRYBB (P21787) Microtubule-associated protein P320 (Fragment)| Length = 290 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = -2 Query: 680 ELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPAD 519 E H + H+ + + P+E Q + + TN H+ +S F H +P D Sbjct: 136 ESHFLTTTHEAYKPIDPSEYRQKRTVGEEVTTNMRHVDESHFLTTTHEAYKPID 189
>YOT5_CAEEL (P34651) Hypothetical protein ZK632.5| Length = 824 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 671 VIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFA 552 V+ ++H L +VL T ++L E RLR H+ +IFA Sbjct: 640 VLRMLHTALNEVLETRNSETLTREPRLRYAFFHMNTTIFA 679
>Y734_CHLPN (Q9Z7H1) UPF0176 protein CPn_0734/CP0012/CPj0734/CpB0762| Length = 324 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +3 Query: 3 EALVGHSVTLADIVMTCNLYHGFARILTKTFTSEFPHVERYFWTMVNQPNFKKV 164 E + H L D+ ++C +Y I F+ PH E Y + +PNF K+ Sbjct: 21 EEIALHKKFLEDLDVSCRIYISEQGI-NGQFSGYEPHAELYMQWLKERPNFSKI 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,530,490 Number of Sequences: 219361 Number of extensions: 1733230 Number of successful extensions: 5010 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4996 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
