Clone Information

BLAST Search Result

Clone Name	baal12j07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chlo...	83	2e-16
2	STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chlo...	82	4e-16
3	STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chlo...	82	4e-16
4	STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chlo...	81	9e-16
5	STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chlo...	80	2e-15
6	STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chlo...	80	2e-15
7	STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chlo...	80	2e-15
8	STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, see...	79	3e-15
9	STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chlo...	79	3e-15
10	STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chlo...	79	4e-15
11	STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chlo...	77	1e-14
12	STAD_LINUS (P32062) Acyl-[acyl-carrier-protein] desaturase, chlo...	76	3e-14
13	STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chlo...	75	4e-14
14	STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chlo...	75	4e-14
15	STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chlo...	71	7e-13
16	STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chlo...	67	1e-11
17	STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desatur...	64	1e-10
18	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	33	0.28
19	EFG_STRAW (Q82DQ1) Elongation factor G (EF-G)	33	0.28
20	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	33	0.28
21	CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal doma...	32	0.36
22	EFG_STRRA (P29541) Elongation factor G (EF-G) (Fragment)	31	0.81
23	EFG_NOCFA (Q5YPG3) Elongation factor G (EF-G)	31	1.1
24	SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-rel...	31	1.1
25	YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY i...	31	1.1
26	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	31	1.1
27	EFG1_STRCO (P40173) Elongation factor G 1 (EF-G 1)	30	1.8
28	CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain	30	1.8
29	SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synap...	30	2.3
30	COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Co...	30	2.3
31	ZSCA1_HUMAN (Q8NBB4) Zinc finger and SCAN domain-containing prot...	30	2.3
32	NIU2_RHOCA (Q10373) Nitrogen fixation protein nifU 2	30	2.3
33	SYGP1_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synapti...	30	2.3
34	IRX6_HUMAN (P78412) Iroquois-class homeodomain protein IRX-6 (Ir...	29	4.0
35	LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-bind...	29	4.0
36	MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (...	29	4.0
37	PDE3A_MOUSE (Q9Z0X4) cGMP-inhibited 3',5'-cyclic phosphodiestera...	28	5.2
38	EFG_CORJK (Q4JT40) Elongation factor G (EF-G)	28	5.2
39	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	28	5.2
40	EFG_CORGL (Q8NT19) Elongation factor G (EF-G)	28	5.2
41	CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 ...	28	5.2
42	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	28	5.2
43	EFG_TROWT (Q83FP1) Elongation factor G (EF-G)	28	5.2
44	EFG_TROW8 (Q83NA0) Elongation factor G (EF-G)	28	5.2
45	EFG_MICLU (P09952) Elongation factor G (EF-G)	28	5.2
46	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	28	6.8
47	CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor	28	6.8
48	SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh...	28	6.8
49	EFG_THEFY (Q47LJ0) Elongation factor G (EF-G)	28	6.8
50	EFG_PROAC (Q6A6L5) Elongation factor G (EF-G)	28	6.8
51	DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC...	28	6.8
52	JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1) ...	28	6.8
53	EFG_COREF (Q8FS85) Elongation factor G (EF-G)	28	8.9
54	EFG_CORDI (Q6NJD6) Elongation factor G (EF-G)	28	8.9
55	CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor	28	8.9
56	EFG2_GEOSL (Q748Y8) Elongation factor G 2 (EF-G 2)	28	8.9
57	HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (...	28	8.9
58	HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (...	28	8.9
59	CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor	28	8.9
60	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	28	8.9
61	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	28	8.9
62	HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn...	28	8.9
63	EFG_MYCPA (Q73SD2) Elongation factor G (EF-G)	28	8.9
64	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	28	8.9
65	Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145	28	8.9
66	H2B3_PARAN (P02292) Histone H2B.3, sperm	28	8.9
67	CJ095_HUMAN (Q9H7T3) Protein C10orf95	28	8.9

>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRW++ +LTGLSGEGHKA+DY+C LA RIRKL+ERAQ+RAKQ   +P
Sbjct: 331 LEFLVGRWEIEKLTGLSGEGHKARDYVCGLAPRIRKLEERAQARAKQKAPVP 382

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>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRWK+  LTGLSGEG+KAQ+YLC L  RIR+LDERAQ+RAK+  K+P
Sbjct: 336 LEFLVGRWKIESLTGLSGEGNKAQEYLCGLTPRIRRLDERAQARAKKGPKVP 387

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>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLV RWKV +LTGLSGEG +AQD++CTLA RIR+LDERAQ+RAKQA  +P
Sbjct: 328 LEFLVQRWKVADLTGLSGEGRRAQDFVCTLAPRIRRLDERAQARAKQAPVIP 379

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>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRWKV  LTGLSGEG KAQDY+C L  RIRKL+ERAQ RAK+   +P
Sbjct: 334 LEFLVGRWKVESLTGLSGEGQKAQDYVCALPARIRKLEERAQGRAKEGPTIP 385

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>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFL+ RWKV ELTG SGEG +AQD++CTLA RIR+++ERAQ RAKQA ++P
Sbjct: 331 LEFLINRWKVGELTGFSGEGKRAQDFVCTLAPRIRRIEERAQERAKQAPRIP 382

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>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRW + +LTGLSGEG KAQDY+CTL  RIR+L+ERAQSR K+A   P
Sbjct: 328 LEFLVGRWDIEKLTGLSGEGRKAQDYVCTLPPRIRRLEERAQSRVKKASATP 379

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>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
           (Delta(9) stearoyl-acyl carrier protein desaturase)
          Length = 396

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRWKV +LTGLS EG KAQDY+C L  RIR+L+ERAQ RAK+A  MP
Sbjct: 334 LEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLEERAQGRAKEAPTMP 385

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>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 399

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFL GRW++  LTGLSGEG+KAQ+YLC L  RIR+LDERAQ+RAK+  K+P
Sbjct: 337 LEFLAGRWRIESLTGLSGEGNKAQEYLCGLTPRIRRLDERAQARAKKGPKIP 388

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>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 399

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRW+V +LTGLS EG KAQDY+C+L  RIR+L+ERA+ RAKQA  MP
Sbjct: 337 LEFLVGRWEVEKLTGLSSEGQKAQDYVCSLPPRIRRLEERARERAKQAPSMP 388

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>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRWKV +LTGLSGEG KAQDY+C L  RIR+L+ERAQ RAK+   +P
Sbjct: 334 LEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRRLEERAQGRAKEGPVVP 385

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>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEFLVGRWKV +LTGLSGEG KAQDY+C LA RIR+L+ER  +RAK++  +P
Sbjct: 334 LEFLVGRWKVADLTGLSGEGRKAQDYVCGLAPRIRRLEERNSARAKESVNVP 385

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>STAD_LINUS (P32062) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGK 7
           LEFLVGRWKV   TGLSGEG+KAQD++C L  RIRKL+ERA  RAKQ  K
Sbjct: 333 LEFLVGRWKVDAFTGLSGEGNKAQDFVCGLPARIRKLEERAAGRAKQTSK 382

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>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 75.5 bits (184), Expect = 4e-14
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LEF VGRW+V +LTGLS EG +AQDY+C LA RIRKL+ERAQ+RAK A  +P
Sbjct: 331 LEFHVGRWEVEKLTGLSSEGRRAQDYVCGLAPRIRKLEERAQARAKHAKSVP 382

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>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 411

 Score = 75.5 bits (184), Expect = 4e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKM 4
           LEFLVGRWKV +LTGLSGEG KAQ+Y+C L  RIR+L+ERAQ+R K++  +
Sbjct: 329 LEFLVGRWKVEQLTGLSGEGRKAQEYICGLPPRIRRLEERAQARVKESSTL 379

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>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score = 71.2 bits (173), Expect = 7e-13
 Identities = 35/52 (67%), Positives = 39/52 (75%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQAGKMP 1
           LE LV RWKV  L GLSGEGHKAQD++C LA RIRKL ERAQS +K    +P
Sbjct: 336 LEHLVNRWKVENLMGLSGEGHKAQDFVCGLAPRIRKLGERAQSLSKPVSLVP 387

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>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 397

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAK 19
           +E LV RWKV EL GLS EG KAQDYLC+L  RIR+L+ERAQ +A+
Sbjct: 334 VEHLVDRWKVKELAGLSAEGRKAQDYLCSLPSRIRRLEERAQEKAQ 379

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>STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desaturase,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 385

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 25/48 (52%), Positives = 40/48 (83%)
 Frame = -3

Query: 156 LEFLVGRWKVPELTGLSGEGHKAQDYLCTLAGRIRKLDERAQSRAKQA 13
           ++FLV +W V ++TGLSGEG KAQ+Y+C+LA +IR+++E+ Q + K+A
Sbjct: 322 IDFLVDKWNVAKMTGLSGEGRKAQEYVCSLAAKIRRVEEKVQGKEKKA 369

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>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPR-QKGRSVRGPSTCQRGTRG 158
            TGP+ P+      G RG+PGP  PR  KG +    S   +G RG
Sbjct: 1066 TGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRG 1109



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = -1

Query: 164 GPPSSSSLAGGRSPN*PAFLARGTRPRTTSAPSPEGSGSW-----TRGPSREPSK 15
           GPP ++   GG+    PA +     P    A  P G         TRGPS EP K
Sbjct: 383 GPPGNNGSPGGKGEMGPAGIPGA--PGLIGARGPPGPAGTNGIPGTRGPSGEPGK 435

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>EFG_STRAW (Q82DQ1) Elongation factor G (EF-G)|
          Length = 709

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + + SG  A VV GLVPL+   G  GDL
Sbjct: 633 GDVIGDLNSRRGQIQAMEERSG--ARVVKGLVPLSEMFGYVGDL 674

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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPR-QKGRSVRGPSTCQRGTRG 158
            TGP+ P+      G RG+PGP  PR  KG +    S   +G RG
Sbjct: 1066 TGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRG 1109

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>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 961

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -1

Query: 164 GPPSSSSLAGGRSPN*PAFLARGTRPRTTSAPSPEGSGSWTRGPSREPSKP 12
           G  SSSS + G S         G R R     +PEG+G+  +G S EP +P
Sbjct: 466 GTKSSSSASDGES--------EGKRGRQKPKAAPEGAGALAQGSSLEPGRP 508

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>EFG_STRRA (P29541) Elongation factor G (EF-G) (Fragment)|
          Length = 341

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + + +G  A VV GLVPL+   G  GDL
Sbjct: 265 GEVIGDINSRRGQIQAMEERAG--ARVVKGLVPLSEMFGYVGDL 306

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>EFG_NOCFA (Q5YPG3) Elongation factor G (EF-G)|
          Length = 700

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + + SG  A VV  LVPL+   G  GDL
Sbjct: 624 GDVIGDLNSRRGQIQAMEERSG--ARVVKALVPLSEMFGYIGDL 665

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>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 160 PPRVPRWQVEGPRTDRPFWRGAQGPGLPLHPRRKDPEA 47
           P R P+    GP    P +    GP  PL P+R DP+A
Sbjct: 288 PARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDA 325

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>YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY intergenic|
           region
          Length = 118

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +3

Query: 18  AWLATGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTC 140
           +W   G SRPA GS    C+G+  P A        R  S C
Sbjct: 48  SWRRRGSSRPAKGSRVTACQGAGRPSASSSSSTPSRARSRC 88

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPR-QKGRSVRGPSTCQRGTRG 158
            +GP+ PA      G RG+PGP  PR  KG +    +   +G RG
Sbjct: 1067 SGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRG 1110

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>EFG1_STRCO (P40173) Elongation factor G 1 (EF-G 1)|
          Length = 708

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + +  G  A VV GLVPL+   G  GDL
Sbjct: 632 GDVIGDINSRRGQIQAMEERMG--ARVVKGLVPLSEMFGYVGDL 673

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>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPR-QKGRSVRGPSTCQRGTRG 158
            TGP+ P+      G RG PGP  PR  KG +    +   +G RG
Sbjct: 911  TGPAGPSGAPGPAGSRGPPGPQGPRGDKGETGERGAMGIKGHRG 954

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>SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synaptic|
            Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
            (Neuronal RasGAP)
          Length = 1328

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +3

Query: 6    SYRLAWLATGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
            S +L   A    RP+SG+  +    S GP  PRQ+  S  G      G+ GG
Sbjct: 1058 SQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGG 1109

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>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
            Endostatin]
          Length = 1774

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
 Frame = +3

Query: 36   PSRPASGSFRRGCRGSPGPCA----PRQKGRSVRGP 131
            P  P  G F     G PGP      P  KG S+RGP
Sbjct: 1363 PGAPGGGFFSSSVPGPPGPPGYPGIPGPKGESIRGP 1398

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>ZSCA1_HUMAN (Q8NBB4) Zinc finger and SCAN domain-containing protein 1|
          Length = 408

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 160 PPRVPRWQVEGPRTDRPFWRGAQGPGLPLHPRR 62
           PPR    + +GPR   P   GAQGP  P  P+R
Sbjct: 346 PPRKKAPRSKGPRESVPPRDGAQGPVAPRSPKR 378

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>NIU2_RHOCA (Q10373) Nitrogen fixation protein nifU 2|
          Length = 142

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 164 GPPSSSSLAGGRSPN*PAFLARGTRPRTTSAPSPEGSGSWTRGPSRE 24
           G P     AGG++P+  AFLA   R    +AP P  +      P  E
Sbjct: 23  GRPRRRQPAGGKAPDTAAFLANFVRIGEIAAPKPPAAADVVSEPEEE 69

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>SYGP1_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synaptic|
            Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
            (Neuronal RasGAP) (p135 SynGAP)
          Length = 1293

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +3

Query: 6    SYRLAWLATGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
            S +L   A    RP+SG+  +    S GP  PRQ+  S  G      G+ GG
Sbjct: 1058 SQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGG 1109

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>IRX6_HUMAN (P78412) Iroquois-class homeodomain protein IRX-6 (Iroquois|
           homeobox protein 6) (Homeodomain protein IRXB3)
          Length = 445

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 60  FRRGCRGSPGPCAPRQKGRSVR 125
           FR+G +  PGPCA  ++GR  R
Sbjct: 285 FRKGAQSLPGPCAAAREGRLER 306

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>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = +3

Query: 18  AWLATGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPS----TCQRGTRGG 161
           AW  TGP  P SG     C+ +P  C P   GR V  PS     C  G R G
Sbjct: 576 AW--TGPEIPESGPSSSMCQRNPQVCGP---GRCVPRPSGYTCACDPGFRLG 622

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>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 158 PSSSSLAGGRSPN*PAFLARGTRPRTTSAPSPEGSGSWTRGPSREPSKP 12
           PS++S  GG  P+ P+    GT  R  ++ +P GS       S +P+ P
Sbjct: 491 PSTTSSGGGTGPHPPS----GTTLRPPTSSTPGGSPGAENSTSHQPATP 535

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>PDE3A_MOUSE (Q9Z0X4) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 137 GGRSPN*PAFLARGT-RPRTTSAPSPEGSGSWTRGPSREP 21
           GG SP   A +ARG  R R  S+PSP GSG   R  + +P
Sbjct: 17  GGASP---ARVARGNHRHRGESSPSPRGSGCCWRALALQP 53

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>EFG_CORJK (Q4JT40) Elongation factor G (EF-G)|
          Length = 704

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + D +G  A+VV   VPL+   G  GDL
Sbjct: 626 GDVIGDINSRRGQVSSMDDRAG--AKVVKAKVPLSEMFGYIGDL 667

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
           GP  P  G  + G R  PG  APR        P+  Q G R G
Sbjct: 199 GPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGPRPG 241

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>EFG_CORGL (Q8NT19) Elongation factor G (EF-G)|
          Length = 705

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + D +G  A++V   VPL++  G  GDL
Sbjct: 627 GEVIGDVNSRRGQIASMDDRAG--AKLVKAKVPLSQMFGYVGDL 668

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>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen
            240 kDa protein) (Mi2-alpha) (Zinc-finger helicase)
            (hZFH)
          Length = 2000

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGP 131
            T P+ P + +    C   P   AP +KG  +R P
Sbjct: 1537 TSPTTPEASATNSPCTSKPATPAPSEKGEGIRTP 1570

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 30   TGPSRPASGSFRRGCRGSPGPCAPR-QKGRSVRGPSTCQRGTRG 158
            TGP+ PA      G RG  GP  PR  KG +        +G RG
Sbjct: 1058 TGPAGPAGPPGPAGARGPAGPQGPRGDKGETGEQGDRGMKGHRG 1101



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGP 92
           GP  PA    +RG RG PGP
Sbjct: 447 GPPGPAGEEGKRGARGEPGP 466

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>EFG_TROWT (Q83FP1) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + D SG   +V+   VPL+   G  GDL
Sbjct: 625 GDVIGDLNSRRGHIQSMQDSSG--IKVIQARVPLSEMFGYIGDL 666

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>EFG_TROW8 (Q83NA0) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + D SG   +V+   VPL+   G  GDL
Sbjct: 625 GDVIGDLNSRRGHIQSMQDSSG--IKVIQARVPLSEMFGYIGDL 666

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>EFG_MICLU (P09952) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +         G +VV  LVPL+   G  GDL
Sbjct: 623 GDVIGDLNSRRGQIQIQSMEDATGVKVVNALVPLSEMFGYIGDL 666

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
           (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 36  PSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPS 134
           P  P  G  RRG  G P P AP     + RGPS
Sbjct: 831 PRGPGPGPGRRG-GGGPAPGAPAAPAAAARGPS 862

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>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +3

Query: 27   ATGPSRPASGSFRRGCRGSPGPCAPRQKGRSV--RGPSTCQ--RGTRG 158
            A GP  P   + + G RG  GP  P     +V  RGPS  Q  RG +G
Sbjct: 962  APGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKG 1009

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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
            (Proline-rich synapse associated protein 2) (ProSAP2)
            (SPANK-2)
          Length = 1815

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = -1

Query: 161  PPS---SSSLAGGRSPN*PAFLARGTRPRTTS-APSPEGSGSWTRGPSREPSKP 12
            PP+   SSSL+    P    F+ R    R+ S +PSP  S S   GPS  P +P
Sbjct: 1690 PPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRP 1743

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>EFG_THEFY (Q47LJ0) Elongation factor G (EF-G)|
          Length = 704

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + + +G    VV  LVPL+   G  GDL
Sbjct: 628 GDVIGDLNSRRGQIQSMEERAG--TRVVKALVPLSEMFGYVGDL 669

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>EFG_PROAC (Q6A6L5) Elongation factor G (EF-G)|
          Length = 697

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G + ++ +  G   +VV  LVPL+   G  GDL
Sbjct: 620 GTVIGDLNSRRGQIQEMVEEHGN--KVVRALVPLSEMFGYVGDL 661

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>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog)
          Length = 725

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 27  ATGPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRG 158
           A+GPSR    S  RGCRG  G  +P         P  C + T G
Sbjct: 142 ASGPSRRGGRSSFRGCRGGFGLGSPNND----LDPDECMQRTGG 181

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>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)|
           (Mitsugumin-72) (Mg72)
          Length = 662

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 116 PAFLARGTRPRTTSAPSPEGSGSWTRGPSREPSKPVR 6
           P F  +GT P      SPE S  ++R P   P KP +
Sbjct: 453 PHFYRKGTTP----PGSPEASPKYSRSPQPSPPKPAK 485

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>EFG_COREF (Q8FS85) Elongation factor G (EF-G)|
          Length = 704

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + D +G  A++V   VPL++  G  GDL
Sbjct: 627 GEVIGDVNSRRGQISSMEDRAG--AKLVKAKVPLSQMFGYVGDL 668

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>EFG_CORDI (Q6NJD6) Elongation factor G (EF-G)|
          Length = 704

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G + SR G +  + D +G  A+VV   VPL+   G  GDL
Sbjct: 627 GDVIGDINSRRGQVSAMDDRAG--AKVVKAKVPLSEMFGYVGDL 668

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>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGP 92
           GP  PA    +RG RG PGP
Sbjct: 458 GPPGPAGEEGKRGARGEPGP 477

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>EFG2_GEOSL (Q748Y8) Elongation factor G 2 (EF-G 2)|
          Length = 692

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDLPPANE 147
           G + G L SR G ++ +   +G  A+VV  +VPLA+  G   DL  A +
Sbjct: 617 GDVIGDLNSRRGRIMGMEGRAG--AQVVSAMVPLAQMFGYATDLRSATQ 663

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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
           G S+       RG RG+ G  A +Q+GR VRG     RG RGG
Sbjct: 522 GYSQRGGPGSARGVRGARGG-AQQQRGRGVRG----ARGGRGG 559

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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
           G S+       RG RG+ G  A +Q+GR VRG     RG RGG
Sbjct: 522 GYSQRGGPGSARGVRGARGG-AQQQRGRGVRG----ARGGRGG 559

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>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +3

Query: 27   ATGPSRPASGSFRRGCRGSPGPCAPRQKGRSV--RGPSTCQ--RGTRG 158
            A GP  P     + G RG PGP        +V  RGPS  Q  RG +G
Sbjct: 960  APGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKG 1007

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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGP 92
           GP  PA    +RG RG PGP
Sbjct: 447 GPPGPAGEEGKRGARGEPGP 466

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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGP 92
           GP  PA    +RG RG PGP
Sbjct: 447 GPPGPAGEEGKRGARGEPGP 466

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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
           G S+       RG RG+ G  A +Q+GR VRG     RG RGG
Sbjct: 432 GYSQRGGPGSARGVRGARGG-AQQQRGRGVRG----ARGGRGG 469

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>EFG_MYCPA (Q73SD2) Elongation factor G (EF-G)|
          Length = 701

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPDPSGEGAEVVLGLVPLARKAGQFGDL 132
           G + G L SR G +  + + SG  A VV   VPL+   G  GDL
Sbjct: 625 GDVIGDLNSRRGQIQAMEERSG--ARVVKAHVPLSEMFGYVGDL 666

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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  GPSRPASGSFRRGCRGSPGP 92
           GP  PA    +RG RG PGP
Sbjct: 454 GPPGPAGEEGKRGARGEPGP 473

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>Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145|
          Length = 314

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = +1

Query: 1   GHLTGLLGSRLGPLVQLPD---PSGEGA 75
           G L+G LG  +GPL QLP     +G+GA
Sbjct: 104 GALSGALGGVMGPLTQLPQQAMQAGQGA 131

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>H2B3_PARAN (P02292) Histone H2B.3, sperm|
          Length = 148

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 36  PSRPASGSFRRGC--RGSPGPCAPRQKGRSVRGPSTCQRGTRGG 161
           P  PA  S R+G   +GSP   +P +K    RG    +R  +GG
Sbjct: 1   PRSPAKTSPRKGSPRKGSPRKGSPSRKASPKRGGKGAKRAGKGG 44

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
 Frame = -2

Query: 163 APPRVPRWQVEGPRTDRPFWRGAQGPGLPLHPR-------RKDPEAGREG 35
           APPR PR +  G    RP  R   GP  P   R       R+ P AGR G
Sbjct: 109 APPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRG 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.144    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,395,294
Number of Sequences: 219361
Number of extensions: 674515
Number of successful extensions: 3178
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3171
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result