ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal12i16 |
|---|---|
| Clone Library Name | barley_pub |
>KSG3_ARATH (P43289) Shaggy-related protein kinase gamma (EC 2.7.11.1)| (ASK-gamma) Length = 409 Score = 98.6 bits (244), Expect = 5e-21 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVTS 355 MASVG + PS+ + T DA+RLP EM +M I+DD++ E +VNGN TE GHIIVT+ Sbjct: 1 MASVG-IEPSAAVRESTGNVTDADRLPEEMKDMKIQDDKEMEATIVNGNVTETGHIIVTT 59 Query: 356 IEGRNGQAKQTISYMAERVVG 418 I GRNGQ KQTISYMAERVVG Sbjct: 60 IGGRNGQPKQTISYMAERVVG 80
>MSK3_MEDSA (P51139) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1)| Length = 411 Score = 92.4 bits (228), Expect = 4e-19 Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 1/82 (1%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDI-VVNGNGTEPGHIIVT 352 MAS G V P+S F + ++S E+LP EM +M IRDD++ E +V+GNGTE GHIIVT Sbjct: 1 MAS-GGVAPASGFIDKNASSVGVEKLPEEMNDMKIRDDKEMEAATIVDGNGTETGHIIVT 59 Query: 353 SIEGRNGQAKQTISYMAERVVG 418 +I G+NGQ KQTISYMAERVVG Sbjct: 60 TIGGKNGQPKQTISYMAERVVG 81
>MSK1_MEDSA (P51137) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1)| Length = 411 Score = 92.4 bits (228), Expect = 4e-19 Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTS--GDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIV 349 MASVG V P+S F+ G + LP EM +M IRDDR+ E VV+GNGTE GHIIV Sbjct: 1 MASVG-VAPTSGFREVLGDGEIGVDDILPEEMSDMKIRDDREMEATVVDGNGTETGHIIV 59 Query: 350 TSIEGRNGQAKQTISYMAERVVG 418 T+I GRNGQ KQTISYMAERVVG Sbjct: 60 TTIGGRNGQPKQTISYMAERVVG 82
>KSG5_ARATH (Q8VZD5) Shaggy-related protein kinase epsilon (EC 2.7.11.1)| (ASK-epsilon) Length = 410 Score = 92.4 bits (228), Expect = 4e-19 Identities = 47/81 (58%), Positives = 59/81 (72%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVTS 355 MASVG + SS ++ S AE+LP + M I+DD++ E VV+GNGTE GHIIVT+ Sbjct: 1 MASVGTLPASSMATKQSNASICAEKLPEGINEMKIKDDKEMEAAVVDGNGTETGHIIVTT 60 Query: 356 IEGRNGQAKQTISYMAERVVG 418 I G+NGQ KQTISYMAER+VG Sbjct: 61 IGGKNGQPKQTISYMAERIVG 81
>MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1)| Length = 409 Score = 92.4 bits (228), Expect = 4e-19 Identities = 48/81 (59%), Positives = 60/81 (74%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVTS 355 M SVG + P S + +S S +RLP EM +M IRDD++ E +V+GNGTE GHIIVT+ Sbjct: 1 MTSVG-LAPVSGLRESSSHSVGVDRLPEEMNDMRIRDDKEIEAAIVDGNGTETGHIIVTT 59 Query: 356 IEGRNGQAKQTISYMAERVVG 418 I GR+GQ KQTISYMAER+VG Sbjct: 60 IGGRHGQPKQTISYMAERIVG 80
>KSG1_ARATH (P43288) Shaggy-related protein kinase alpha (EC 2.7.11.1)| (ASK-alpha) Length = 405 Score = 91.3 bits (225), Expect = 8e-19 Identities = 51/82 (62%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Frame = +2 Query: 176 MASVG-AVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVT 352 MASVG A P +R S ++LP EM +M IRDD++ E VV+GNGTE GHIIVT Sbjct: 1 MASVGIAPNPGAR------DSTGVDKLPEEMNDMKIRDDKEMEATVVDGNGTETGHIIVT 54 Query: 353 SIEGRNGQAKQTISYMAERVVG 418 +I GRNGQ KQTISYMAERVVG Sbjct: 55 TIGGRNGQPKQTISYMAERVVG 76
>MSK2_MEDSA (P51138) Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1)| Length = 411 Score = 81.3 bits (199), Expect = 9e-16 Identities = 41/81 (50%), Positives = 56/81 (69%) Frame = +2 Query: 176 MASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVTS 355 MA+ G S + S++ ++LP+E+ M I+DD++ E VV+GN TE GH+IVT+ Sbjct: 1 MATAGVAPASGIVDVNASSAIAVDKLPDEILGMRIKDDKEMEAHVVDGNSTEAGHVIVTT 60 Query: 356 IEGRNGQAKQTISYMAERVVG 418 I G+NGQ KQTISYMAER VG Sbjct: 61 IGGKNGQPKQTISYMAERAVG 81
>KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1)| (ASK-delta) Length = 420 Score = 72.4 bits (176), Expect = 4e-13 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 6/89 (6%) Frame = +2 Query: 170 HIMASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRD------DRDPEDIVVNGNGTE 331 H+ VG+ R + +N +TS + L +M M IRD +RD E +++G G E Sbjct: 4 HLGNGVGSSRSA---KNTKNTSSSVDWLSRDMLEMKIRDKTEADEERDSEPDIIDGVGAE 60 Query: 332 PGHIIVTSIEGRNGQAKQTISYMAERVVG 418 PGH+I T++ GRNGQ++QT+SY+AE VVG Sbjct: 61 PGHVITTTLPGRNGQSRQTVSYIAEHVVG 89
>KSG8_ARATH (Q96287) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 472 Score = 68.2 bits (165), Expect = 7e-12 Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 7/65 (10%) Frame = +2 Query: 245 ERLPNEMGNMSIRD-------DRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTISYMA 403 ++LP+ M M IRD D+D E VVNG+GTE G +I T++ GR+G+ KQTISYMA Sbjct: 81 DQLPDVMIEMKIRDERNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMA 140 Query: 404 ERVVG 418 +RVVG Sbjct: 141 QRVVG 145
>KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7.11.1)| (ASK-kappa) (AtK-1) Length = 421 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 6/70 (8%) Frame = +2 Query: 227 STSGDAERLPNEMGNMSIRD------DRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQT 388 S+S + L ++ IRD +RD E +++G G EPGH+I T++ GRNGQ++QT Sbjct: 21 SSSSSVDWLTRDLAETRIRDKVETDDERDSEPDIIDGAGAEPGHVIRTTLRGRNGQSRQT 80 Query: 389 ISYMAERVVG 418 +SY++E VVG Sbjct: 81 VSYISEHVVG 90
>KSGT_BRANA (O04160) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 468 Score = 63.2 bits (152), Expect = 2e-10 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 10/68 (14%) Frame = +2 Query: 245 ERLPNEMGNMSIRDD----------RDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTIS 394 ++LP M +M +R+D +D E +VNG GTE G +I T++ GR+G+ KQTIS Sbjct: 74 DQLPEVMNDMRLREDEPHANRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTIS 133 Query: 395 YMAERVVG 418 YMA+RVVG Sbjct: 134 YMAQRVVG 141
>KSG6_ARATH (Q39010) Shaggy-related protein kinase dzeta (EC 2.7.11.1)| (ASK-dzeta) Length = 412 Score = 56.6 bits (135), Expect = 2e-08 Identities = 27/47 (57%), Positives = 34/47 (72%) Frame = +2 Query: 278 IRDDRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTISYMAERVVG 418 I +D++ V+ GN GHII T+I G+NG+ KQTISYMAERVVG Sbjct: 33 IDNDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVG 79
>KSG7_ARATH (Q39011) Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta)| (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1) Length = 380 Score = 55.8 bits (133), Expect = 4e-08 Identities = 27/45 (60%), Positives = 34/45 (75%) Frame = +2 Query: 284 DDRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTISYMAERVVG 418 DD++ VV+G+ GHII T+I G+NG+ KQTISYMAERVVG Sbjct: 3 DDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVG 47
>KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.11.1)| (ASK-iota) Length = 407 Score = 55.5 bits (132), Expect = 5e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = +2 Query: 287 DRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTISYMAERVVG 418 D++ V+ GN GHII T+I G+NG+ KQTISYMAERVVG Sbjct: 34 DKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVG 77
>KSG2_ARATH (O23145) Shaggy-related protein kinase beta (EC 2.7.11.1)| (ASK-beta) Length = 431 Score = 51.2 bits (121), Expect = 9e-07 Identities = 29/68 (42%), Positives = 41/68 (60%) Frame = +2 Query: 215 QNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVTSIEGRNGQAKQTIS 394 ++ S+S +++ LP E IR+D D ++ GNGTE G II T +G N Q +TIS Sbjct: 49 KDSVSSSENSDHLPKE-----IREDMDCG--IIKGNGTESGRIITTKKKGLNDQKDKTIS 101 Query: 395 YMAERVVG 418 Y AE V+G Sbjct: 102 YRAEHVIG 109
>FLAEY_CAUCR (P15345) Regulatory protein flaEY| Length = 954 Score = 31.6 bits (70), Expect = 0.78 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = -1 Query: 253 KSFGITTSTRVILKARGRTHRTNRGHNVVELPNKVLQATVQNAPYLVNRVSRPACPTRGS 74 KSFG+T++ + L G T RT NVV N ++A N + V R Sbjct: 189 KSFGVTSTVTMDLSEMGATPRTM--SNVVSYMNGKMKAAGFNTDFSVQRT---------V 237 Query: 73 GTESA*RGDGFPPSLPSSG 17 G E + +G P LP++G Sbjct: 238 GQERTVQVNGKPVKLPATG 256
>NDRG3_XENTR (Q6DFS4) Protein NDRG3| Length = 387 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%) Frame = -1 Query: 319 AVDYYIFRVPVIPYAHIAHLVRKSFGITTSTRVILKARGRTHRTNRGHNVVELP------ 158 A+ Y++ + IP+ ++HL +S + TR++ R RTH + + +E+P Sbjct: 304 AIKYFVQGMGYIPHVQLSHLSTESVPSASMTRLV---RSRTHSASSSGS-MEMPRSRSHT 359 Query: 157 -NKVLQATVQNA 125 N LQ+T N+ Sbjct: 360 SNAQLQSTSNNS 371
>CASC3_RAT (Q8K3X0) Protein CASC3 (Cancer susceptibility candidate gene 3| protein homolog) (Barentsz protein) (Btz) Length = 699 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -1 Query: 88 PTRGSGTESA*RGDGFPPSLPSSGAGRGG 2 P RG G+ S G G SLPS GRGG Sbjct: 28 PARGGGSCSGSAGGGGSGSLPSQRGGRGG 56
>FURIN_RAT (P23377) Furin precursor (EC 3.4.21.75) (Paired basic amino acid| residue cleaving enzyme) (PACE) (Dibasic-processing enzyme) (Prohormone convertase 3) Length = 793 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 299 QGPCHPLCSYCPSRSEVVRHHH*YSCHSESARKDAPHQPRP 177 QGP C CPS + + S S+S+R+ P QP P Sbjct: 652 QGPAPTDCLSCPSHASLDPVEQTCSRQSQSSRESRPQQPPP 692
>CASC3_MOUSE (Q8K3W3) Protein CASC3 (Cancer susceptibility candidate gene 3| protein homolog) (Metastatic lymph node protein 51 homolog) (MLN 51 protein homolog) (Barentsz protein) (Btz) Length = 697 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -1 Query: 88 PTRGSGTESA*RGDGFPPSLPSSGAGRGG 2 P RG G+ S G G SLPS GRGG Sbjct: 28 PARGGGSCSGSVGGGGSGSLPSQRGGRGG 56
>DIA_DROME (P48608) Protein diaphanous| Length = 1091 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/32 (46%), Positives = 15/32 (46%) Frame = +3 Query: 3 PPRPAPELGREGGNPSPRQADSVPDPRVGHAG 98 PP P P GR GG P P P P G AG Sbjct: 525 PPPPPPMPGRAGGGPPP----PPPPPMPGRAG 552
>Y111_MYCPN (P75451) Hypothetical adenine-specific methylase MPN111 (EC| 2.1.1.72) (C09_orf422) Length = 422 Score = 28.5 bits (62), Expect = 6.6 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = -1 Query: 361 LNACDYNMAWFRPIAVDYYIFRVPVIP--YAHIAHLVRK---SFGITTSTRVILK 212 LN CD N +FR IA+ +IP YA H++ K S G+T T ++++ Sbjct: 98 LNPCDKNGVFFREIALRLDKGLTKIIPDEYARKKHIMTKMLFSIGLTKFTSLMVR 152
>NRDI_CORAM (O69272) Protein nrdI| Length = 144 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -1 Query: 199 THRTNRGHNVVELPNKVLQATVQNAPYLVNRVSRPACPTRGSG 71 T T+R ++LPN + +++ P +VN CPT G G Sbjct: 10 TDNTHRFVQKLDLPNVRIPLRLKDEPLIVNEPYVLVCPTYGGG 52
>MRAY_CHLTE (Q8KGD1) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 368 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 Query: 373 PISSLNACDYNMAWFRPIAVDYYIFRVPVI 284 P+ S+ D + +F+ ++VDY IF +PV+ Sbjct: 153 PVFSVLLSDTTVPFFKKLSVDYGIFYIPVV 182
>SYC_BURPS (Q63SS8) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = -1 Query: 328 RPIAVDYYIFRVPVIPYAHIAHLVRKSFGITTSTRVILKARGRTHRTNRGHNVVELPNKV 149 +P V Y+ + V Y HI H + + + L+ARG +R N+ ++ +K+ Sbjct: 21 QPGEVRMYVCGITVYDYCHIGH--ARMVVVFDIVQRWLRARG--YRVTYVRNITDIDDKI 76 Query: 148 LQATVQN 128 ++ V+N Sbjct: 77 IRRAVEN 83
>SYC_BURMA (Q62J37) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = -1 Query: 328 RPIAVDYYIFRVPVIPYAHIAHLVRKSFGITTSTRVILKARGRTHRTNRGHNVVELPNKV 149 +P V Y+ + V Y HI H + + + L+ARG +R N+ ++ +K+ Sbjct: 21 QPGEVRMYVCGITVYDYCHIGH--ARMVVVFDIVQRWLRARG--YRVTYVRNITDIDDKI 76 Query: 148 LQATVQN 128 ++ V+N Sbjct: 77 IRRAVEN 83
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%) Frame = +2 Query: 236 GDAERLPNE--MGNMSIRD--DRDPEDIVVNGNGTEPGHIIVTSIEG 364 G+ ER ++ +G+ +I++ D DPEDI+ N N P H T++EG Sbjct: 423 GETERFSSDSPIGSNNIQNFGDIDPEDILNNDNPYTPKH---TNVEG 466
>TBCD_MOUSE (Q8BYA0) Tubulin-specific chaperone D (Tubulin-folding cofactor D)| (Beta-tubulin cofactor D) Length = 1196 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -1 Query: 253 KSFGITTSTRVILKARGRTHRTNRGHNVVELPNKVLQATVQNAPYLVN 110 ++FG + TR +L++ HR V E +V+ Q P+L++ Sbjct: 28 EAFGESAETRALLRSLPAVHRERASREVAEERFRVIMDKYQEQPHLLD 75
>VE4_HPV05 (P06924) Probable protein E4| Length = 245 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +3 Query: 3 PPRPAPELGREGGNPSPRQADSVPDPRVGH 92 PP PAP G G P +Q + P+ R GH Sbjct: 150 PPPPAPHNGHSGHEPKVQQPEG-PEGREGH 178
>HEMN_PASHA (P95506) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) (Fragment) Length = 146 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = -3 Query: 308 LYLQGP-CHPLCSYCPSRSEVVRHHH 234 LY+ P CH LC +C + RH H Sbjct: 53 LYVHIPFCHKLCYFCGCNKVITRHRH 78
>FTHFD_MOUSE (Q8R0Y6) 10-formyltetrahydrofolate dehydrogenase (EC 1.5.1.6)| (10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1) Length = 902 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/80 (22%), Positives = 39/80 (48%) Frame = +2 Query: 173 IMASVGAVRPSSRFQNDTSTSGDAERLPNEMGNMSIRDDRDPEDIVVNGNGTEPGHIIVT 352 I+ +V V S+ F + S D RL E+ + + + ED+ + + ++V Sbjct: 334 ILPNVPEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMATTFGDFIQLLVR 393 Query: 353 SIEGRNGQAKQTISYMAERV 412 + G +G+++ I+Y+ + V Sbjct: 394 KLRGEDGESECVINYVEKAV 413 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,999,951 Number of Sequences: 219361 Number of extensions: 1410644 Number of successful extensions: 4120 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3782 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4112 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
