| Clone Name | baal12i16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF525086.1| Triticum aestivum GSK-like kinase mRNA, complete cds Length = 1573 Score = 424 bits (214), Expect = e-115 Identities = 229/234 (97%) Strand = Plus / Plus Query: 185 gttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactagtggtgatgcc 244 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gttggtgtggtgcgtccttcctcgcgctttcagaacgacacgagtactagtggtgatgcc 60 Query: 245 gaacgacttccgaacgagatgggcaatatgagcataagggatgacagggaccctgaagat 304 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 gaccgacttccgaacgagatgggcaatatgagcataagggatgacagggaccctgaggat 120 Query: 305 atagtagtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgaggga 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atagtagtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgaggga 180 Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 181 agaaatgggcaagcaaaacagaccattagctacatggctgagcgtgtggttggt 234
>dbj|AK058276.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C05, full insert sequence Length = 1800 Score = 172 bits (87), Expect = 6e-40 Identities = 200/237 (84%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 217 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 276 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatg---acag 291 ||| |||||||| ||||||||||| |||||| |||||||||| |||||||||| | | Sbjct: 277 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatgataataa 336 Query: 292 ggaccctgaagatatagtagtcaacggcaatgggacggaaccaggccatattatagtcac 351 |||| ||| || ||||| ||||| ||||||||||| ||||| || ||| |||| || || Sbjct: 337 ggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgac 396 Query: 352 aagcattgagggaagaaatgggcaagcaaaacagaccattagctacatggctgagcg 408 ||||||||| ||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 397 aagcattgatggaagaaatggacaggctaaacagaccattagctacatggccgagcg 453
>dbj|D50569.1| Oryza sativa mRNA, similar to protein kinase Length = 337 Score = 167 bits (84), Expect = 4e-38 Identities = 199/237 (83%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 83 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 142 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatg---acag 291 ||| |||||||| ||||||||||| |||||| |||||||||| |||||||||| | | Sbjct: 143 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatgataataa 202 Query: 292 ggaccctgaagatatagtagtcaacggcaatgggacggaaccaggccatattatagtcac 351 |||| ||| || ||||| ||||| ||||||||||| ||||| || ||| |||| || || Sbjct: 203 ggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgac 262 Query: 352 aagcattgagggaagaaatgggcaagcaaaacagaccattagctacatggctgagcg 408 ||||||||| ||||||||||| || || |||||| |||||||||||||||| ||||| Sbjct: 263 aagcattgatggaagaaatggacaggctaaacagnccattagctacatggccgagcg 319
>dbj|AK121623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045G07, full insert sequence Length = 1884 Score = 165 bits (83), Expect = 1e-37 Identities = 199/237 (83%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 216 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 275 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatgacag--- 291 ||| |||||||| || |||||||| |||||| |||||||||| ||||||||||| | Sbjct: 276 tggcgatgccgaccggcttccgaatgagatgagcaatatgagtataagggatgataataa 335 Query: 292 ggaccctgaagatatagtagtcaacggcaatgggacggaaccaggccatattatagtcac 351 |||| ||| || ||||| ||||| ||||||||||| ||||| || ||| |||| || || Sbjct: 336 ggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgac 395 Query: 352 aagcattgagggaagaaatgggcaagcaaaacagaccattagctacatggctgagcg 408 ||||||||| ||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 396 aagcattgatggaagaaatggacaggctaaacagaccattagctacatggccgagcg 452
>dbj|AK064884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K07, full insert sequence Length = 2017 Score = 165 bits (83), Expect = 1e-37 Identities = 199/237 (83%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | ||| |||| || || ||||| || Sbjct: 221 tatggcctcggtaggtgtggtgcgttcttccttggggtttgagaacgaaacaagtacaag 280 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatgacag--- 291 ||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||| | Sbjct: 281 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatgataataa 340 Query: 292 ggaccctgaagatatagtagtcaacggcaatgggacggaaccaggccatattatagtcac 351 |||| ||| || ||||| ||||| ||||||||||| ||||| || ||| |||| || || Sbjct: 341 ggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgac 400 Query: 352 aagcattgagggaagaaatgggcaagcaaaacagaccattagctacatggctgagcg 408 ||||||||| ||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 401 aagcattgatggaagaaatggacaggctaaacagaccattagctacatggccgagcg 457
>gb|AY108486.1| Zea mays PCO107502 mRNA sequence Length = 1752 Score = 151 bits (76), Expect = 2e-33 Identities = 142/164 (86%) Strand = Plus / Plus Query: 251 cttccgaacgagatgggcaatatgagcataagggatgacagggaccctgaagatatagta 310 ||||| |||||| |||||| ||||||||||||||| |||| |||| ||||||||| ||| Sbjct: 244 cttcccaacgagttgggcagtatgagcataagggacgacaaggacgttgaagatattgta 303 Query: 311 gtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgagggaagaaat 370 ||||| ||||||||| |||| || || ||||| ||||| || |||||||| || |||||| Sbjct: 304 gtcaatggcaatggggcggagcctggtcatatcatagtgaccagcattgatgggagaaat 363 Query: 371 gggcaagcaaaacagaccattagctacatggctgagcgcgtggt 414 ||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 364 gggcaggcaaagcagaccattagttacatggctgagcgggtggt 407
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 107 bits (54), Expect = 3e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 9278 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 9219 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatga 288 ||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||| Sbjct: 9218 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatga 9165 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 305 atagtagtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgaggga 364 ||||| ||||| ||||||||||| ||||| || ||| |||| || ||||||||||| ||| Sbjct: 9066 atagttgtcaatggcaatgggacagaacctggtcatgttattgtgacaagcattgatgga 9007 Query: 365 agaaatgggcaagcaaaacag 385 |||||||| || || |||||| Sbjct: 9006 agaaatggacaggctaaacag 8986 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcg 408 |||||||||||||||||||| ||||| Sbjct: 8874 cagaccattagctacatggccgagcg 8849
>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08, complete sequence Length = 115640 Score = 107 bits (54), Expect = 3e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 95175 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 95116 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatga 288 ||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||| Sbjct: 95115 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatga 95062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 305 atagtagtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgaggga 364 ||||| ||||| ||||||||||| ||||| || ||| |||| || ||||||||||| ||| Sbjct: 94963 atagttgtcaatggcaatgggacagaacctggtcatgttattgtgacaagcattgatgga 94904 Query: 365 agaaatgggcaagcaaaacag 385 |||||||| || || |||||| Sbjct: 94903 agaaatggacaggctaaacag 94883 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcg 408 |||||||||||||||||||| ||||| Sbjct: 94771 cagaccattagctacatggccgagcg 94746
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 107 bits (54), Expect = 3e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 175 tatggcctcggttggtgcggtgcgtccttcctcgcgctttcagaatgacacgagtactag 234 |||||||||||| |||| ||||||| |||||| | | |||||||| || || ||||| || Sbjct: 1916401 tatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaag 1916342 Query: 235 tggtgatgccgaacgacttccgaacgagatgggcaatatgagcataagggatga 288 ||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||| Sbjct: 1916341 tggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatga 1916288 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 305 atagtagtcaacggcaatgggacggaaccaggccatattatagtcacaagcattgaggga 364 ||||| ||||| ||||||||||| ||||| || ||| |||| || ||||||||||| ||| Sbjct: 1916189 atagttgtcaatggcaatgggacagaacctggtcatgttattgtgacaagcattgatgga 1916130 Query: 365 agaaatgggcaagcaaaacag 385 |||||||| || || |||||| Sbjct: 1916129 agaaatggacaggctaaacag 1916109 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcg 408 |||||||||||||||||||| ||||| Sbjct: 1915997 cagaccattagctacatggccgagcg 1915972 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcgcgt 411 ||||| |||||||||||||| |||||||| Sbjct: 6575751 cagacaattagctacatggcggagcgcgt 6575723
>ref|NM_122557.2| Arabidopsis thaliana ATSK11; protein kinase AT5G26751 (ATSK11) mRNA, complete cds Length = 1662 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 418 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 471
>gb|AY142595.1| Arabidopsis thaliana putative shaggy kinase alpha (At5g26751) mRNA, complete cds Length = 1249 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 175 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 228
>emb|X75432.1|ATRNAASKA A.thaliana ASK-alpha mRNA Length = 1496 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 254 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 307
>emb|X68525.1|ATASKA A.thaliana ASKalpha gene for serine/threonine protein kinase Length = 1496 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 254 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 307
>gb|AY046024.1| Arabidopsis thaliana putative shaggy kinase alpha (At5g26751) mRNA, complete cds Length = 1667 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 418 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 471
>gb|AF428327.1|AF428327 Arabidopsis thaliana AT5g26750/F2P16_10 mRNA, complete cds Length = 1634 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 418 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 471
>emb|BX831446.1|CNS09YSF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1638 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 365 agaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttggt 418 |||||||| ||| |||||||||| |||||||||||||||||||| || |||||| Sbjct: 402 agaaatggccaaccaaaacagacaattagctacatggctgagcgtgttgttggt 455
>ref|NM_202042.1| Arabidopsis thaliana GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase AT1G06390 (GSK1) transcript variant AT1G06390.2 mRNA, complete cds Length = 1469 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 235 caaagcagaccattagttacatggctgagcgggttgttgg 274
>ref|NM_100519.2| Arabidopsis thaliana GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase AT1G06390 (GSK1) transcript variant AT1G06390.1 mRNA, complete cds Length = 1634 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 263 caaagcagaccattagttacatggctgagcgggttgttgg 302
>emb|X99696.1|ATASKIOTA A.thaliana mRNa for shaggy-like kinase iota Length = 1614 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 263 caaagcagaccattagttacatggctgagcgggttgttgg 302
>gb|AY051053.1| Arabidopsis thaliana putative shaggy kinase (At1g06390) mRNA, complete cds Length = 1255 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 191 caaagcagaccattagttacatggctgagcgggttgttgg 230
>gb|AY035048.1| Arabidopsis thaliana putative shaggy kinase (At1g06390) mRNA, complete cds Length = 1582 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 234 caaagcagaccattagttacatggctgagcgggttgttgg 273
>emb|AJ000732.1|ATAJ732 Arabidopsis thaliana ASKalpha gene Length = 8645 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 383 cagaccattagctacatggctgagcgcgtggttggt 418 ||||| |||||||||||||||||||| || |||||| Sbjct: 5807 cagacaattagctacatggctgagcgtgttgttggt 5842
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcgcgtggttggt 418 ||||| |||||||||||||||||||| || |||||| Sbjct: 2897 cagacaattagctacatggctgagcgtgttgttggt 2862
>emb|BX815323.1|CNS0ABFT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1409 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 220 caaagcagaccattagttacatggctgagcgggttgttgg 259
>emb|BX817800.1|CNS0AB1V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZC04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1461 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 227 caaagcagaccattagttacatggctgagcgggttgttgg 266
>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 41039 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 382 acagaccattagctacatggctgagcgcgtggttgg 417 |||||||||||| |||||||||||||| || ||||| Sbjct: 26456 acagaccattagttacatggctgagcgggttgttgg 26491
>gb|AF019927.1|AF019927 Arabidopsis thaliana GSK3/shaggy-like protein kinase (GSK1) mRNA, complete cds Length = 1572 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 378 caaaacagaccattagctacatggctgagcgcgtggttgg 417 |||| ||||||||||| |||||||||||||| || ||||| Sbjct: 216 caaagcagaccattagttacatggctgagcgggttgttgg 255
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 15 gcgccggagctggggagggagggggga 41 ||||||||||||||||||| ||||||| Sbjct: 13310531 gcgccggagctggggagggggggggga 13310505
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 15 gcgccggagctggggagggagggggga 41 ||||||||||||||||||| ||||||| Sbjct: 50889 gcgccggagctggggagggggggggga 50863
>gb|AY103545.1| Zea mays PCO153236 mRNA sequence Length = 1967 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 368 aatgggcaagcaaaacagaccattagctacatggctgagcgc 409 ||||| ||| |||||||||| | |||||||||||||||||| Sbjct: 540 aatggtcaaccaaaacagacagtgagctacatggctgagcgc 581
>ref|NM_187864.1| Oryza sativa (japonica cultivar-group), Ozsa8308 predicted mRNA Length = 1227 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 aaacagaccattagctacatggctgagcg 408 |||||||| ||||||||||||||||||| Sbjct: 199 aaacagacagttagctacatggctgagcg 227
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 383 cagaccattagctacatggctgagcgcgt 411 ||||| |||||||||||||| |||||||| Sbjct: 13805 cagacaattagctacatggcggagcgcgt 13777
>emb|BX640506.12| Zebrafish DNA sequence from clone DKEY-271E14 in linkage group 12, complete sequence Length = 196667 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gcattctgaacggtagcctgt 146 ||||||||||||||||||||| Sbjct: 99265 gcattctgaacggtagcctgt 99245
>gb|BT009253.1| Triticum aestivum clone wlk4.pk0007.c4:fis, full insert mRNA sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 cagaccattagctacatggctgagcgcgt 411 ||||| |||||||||||||| |||||||| Sbjct: 223 cagacgattagctacatggcggagcgcgt 251
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cccgcgtcgggcacgccggcc 99 ||||||||||||||||||||| Sbjct: 75012 cccgcgtcgggcacgccggcc 74992
>emb|BX004857.10| Zebrafish DNA sequence from clone CH211-217I17, complete sequence Length = 155624 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gcattctgaacggtagcctgt 146 ||||||||||||||||||||| Sbjct: 43914 gcattctgaacggtagcctgt 43894
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence Length = 149481 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 attgagggaagaaatgggcaa 376 ||||||||||||||||||||| Sbjct: 101818 attgagggaagaaatgggcaa 101838
>dbj|AK099742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C23, full insert sequence Length = 2624 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 aaacagaccattagctacatggctgagcg 408 |||||||| ||||||||||||||||||| Sbjct: 1270 aaacagacagttagctacatggctgagcg 1298
>dbj|AK104687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E09, full insert sequence Length = 1600 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 aaacagaccattagctacatggctgagcg 408 |||||||| ||||||||||||||||||| Sbjct: 246 aaacagacagttagctacatggctgagcg 274
>dbj|AK068737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158B10, full insert sequence Length = 1829 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 aaacagaccattagctacatggctgagcg 408 |||||||| ||||||||||||||||||| Sbjct: 399 aaacagacagttagctacatggctgagcg 427
>dbj|AB059621.1| Oryza sativa OSKgamma mRNA for shaggy-related protein kinase gamma, complete cds Length = 1592 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 aaacagaccattagctacatggctgagcg 408 |||||||| ||||||||||||||||||| Sbjct: 403 aaacagacagttagctacatggctgagcg 431
>ref|NM_180189.2| Arabidopsis thaliana ATSK12; protein kinase AT3G05840 (ATSK12) transcript variant AT3G05840.2 mRNA, complete cds Length = 1669 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 388 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 443
>ref|NM_111458.2| Arabidopsis thaliana ATSK12; protein kinase AT3G05840 (ATSK12) transcript variant AT3G05840.1 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 438 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 493
>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence Length = 186286 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tggggagggaggggggaaat 44 |||||||||||||||||||| Sbjct: 71099 tggggagggaggggggaaat 71080
>ref|XM_746687.1| Aspergillus fumigatus Af293 homocitrate synthase (Afu4g10460) partial mRNA Length = 1392 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gtcaacggcaatgggacgga 330 |||||||||||||||||||| Sbjct: 1251 gtcaacggcaatgggacgga 1232
>emb|Y08607.1|NTNSK6 N.tabacum mRNA for shaggy-like kinase 6 Length = 2092 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 tacatggctgagcgcgtggttggt 418 |||||||| ||||||||||||||| Sbjct: 567 tacatggcggagcgcgtggttggt 590
>emb|X75431.1|ATRNAASKG A.thaliana ASK-gamma mRNA Length = 1658 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 357 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 412
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tggggagggaggggggaaat 44 |||||||||||||||||||| Sbjct: 86959 tggggagggaggggggaaat 86978
>emb|AJ224163.1|NTAJ4163 Nicotiana tabacum mRNA for shaggy-like kinase 91 Length = 1972 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 tacatggctgagcgcgtggttggt 418 |||||||| ||||||||||||||| Sbjct: 559 tacatggcagagcgcgtggttggt 582
>gb|AY093347.1| Arabidopsis thaliana shaggy related protein kinase, ASK-GAMMA (At3g05840) mRNA, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 184 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 239
>gb|AC004840.4| Homo sapiens PAC clone RP4-607J2 from 7, complete sequence Length = 149397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gaaatgggcaagcaaaacag 385 |||||||||||||||||||| Sbjct: 53948 gaaatgggcaagcaaaacag 53929
>gb|AC093908.3| Homo sapiens BAC clone RP11-752L20 from 4, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ggaaccaggccatattatag 347 |||||||||||||||||||| Sbjct: 146836 ggaaccaggccatattatag 146855
>gb|AC022306.6| Homo sapiens chromosome 15 clone RP11-295H24 map 15q21.1, complete sequence Length = 176827 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggggagggaggggggaaatc 45 |||||||||||||||||||| Sbjct: 167817 ggggagggaggggggaaatc 167836
>gb|AY062713.1| Arabidopsis thaliana shaggy related protein kinase, ASK-GAMMA (At3g05840; F10A16.14) mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 375 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 430
>gb|AC158667.8| Mus musculus 6 BAC RP23-83P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234055 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ggagctggggagggaggggg 39 |||||||||||||||||||| Sbjct: 132571 ggagctggggagggaggggg 132552
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tggggagggaggggggaaat 44 |||||||||||||||||||| Sbjct: 6666003 tggggagggaggggggaaat 6666022
>emb|BX823376.1|CNS0A5F6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1667 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 362 ggaagaaatgggcaagcaaaacagaccattagctacatggctgagcgcgtggttgg 417 ||||||||||| || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 412 ggaagaaatggccagccaaaacagacaatcagttacatggcggagcgagttgttgg 467
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tggggagggaggggggaaat 44 |||||||||||||||||||| Sbjct: 195956 tggggagggaggggggaaat 195937
>gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 DS01386 (D198)), complete sequence Length = 61849 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tggggagggaggggggaaat 44 |||||||||||||||||||| Sbjct: 31573 tggggagggaggggggaaat 31554
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ggagctggggagggaggggg 39 |||||||||||||||||||| Sbjct: 180863 ggagctggggagggaggggg 180882
>emb|AL844224.3| Mouse DNA sequence from clone RP24-362D22 on chromosome 4, complete sequence Length = 120333 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aagggatgacagggaccctg 299 |||||||||||||||||||| Sbjct: 85258 aagggatgacagggaccctg 85239 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,917,257 Number of Sequences: 3902068 Number of extensions: 2917257 Number of successful extensions: 58951 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58765 Number of HSP's gapped (non-prelim): 186 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)